felicity-lims/felicity/lims/seeds/data/analyses.json

{
  "categories": ["Quality Control", "Molecular Techniques"],
  "qc_levels": [
    "Blank",
    "Negative Control",
    "Positive Control",
    "Low Positive Control",
    "High Positive Control"
  ],
  "sample_types": [
    {
      "name": "QC Sample",
      "description": "QC Sample",
      "abbr": "QCS",
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Whole Blood",
      "description": "Whole Blood",
      "abbr": "WB",
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Blood Plasma",
      "description": "Blood Plasma",
      "abbr": "BP",
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Blood Serum",
      "description": "Blood Serum",
      "abbr": "BS",
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Dried Blood Spot",
      "description": "Dried Blood Spot",
      "abbr": "DBS",
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    { "name": "Urine", "description": "Urine", "abbr": "BV", "active": 1, "mappins": [{ "loinc": "" }] },
    { "name": "Stool", "description": "Stool", "abbr": "BG", "active": 1, "mappins": [{ "loinc": "" }] },
    {
      "name": "Synovial Fluid",
      "description": "Synovial Fluid",
      "abbr": "SF",
      "active": 0,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Cerebral Spinal Fluid",
      "description": "Cerebral Spinal Fluid",
      "abbr": "CSF",
      "active": 0,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Nasal-Pharyngeal Swab",
      "description": "Nasal-Pharyngeal Swab",
      "abbr": "NPS",
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Oral-Pharyngeal Swab",
      "description": "Oral-Pharyngeal Swab",
      "abbr": "OPS",
      "active": 0,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Pus Swab",
      "description": "Pus Swab",
      "abbr": "PS",
      "active": 0,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Arterial Blood",
      "description": "Arterial Blood",
      "abbr": "AB",
      "active": 0,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Venous Blood",
      "description": "Vernous Blood",
      "abbr": "VB",
      "active": 0,
      "mappins": [{ "loinc": "" }]
    }
  ],
  "analyses": [
    {
      "name": "HIV",
      "description": "Human Immune Virus",
      "keyword": "hiv",
      "sort_key": 1,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "HIV Viral Load",
      "description": "HIV Viral Load",
      "keyword": "hivViralLoad",
      "sort_key": 1,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "HIV EID",
      "description": "HIV Early Infant Diagnosis",
      "keyword": "hivEid",
      "sort_key": 1,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "ESR",
      "description": "Erythrocyte Sedimentation Rate",
      "keyword": "esr",
      "sort_key": 1,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "C-RP",
      "description": "C Reactive Protein",
      "keyword": "c_rp",
      "sort_key": 1,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "COVID 19",
      "description": "Corona Virus - SARS COV 2",
      "keyword": "sars-cov2",
      "sort_key": 1,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "HbA1cHbA1c",
      "description": "HbA1cHbA1c",
      "keyword": "HbA1cHbA1c",
      "sort_key": 1,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },

    {
      "name": "K+",
      "description": "Potassium",
      "keyword": "potassium",
      "sort_key": 1,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Na-",
      "description": "Sodium",
      "keyword": "sodium",
      "sort_key": 2,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Cl-",
      "description": "Chloride",
      "keyword": "chloride",
      "sort_key": 3,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Creatinine",
      "description": "Creatinine",
      "keyword": "creatinine",
      "sort_key": 4,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Urea",
      "description": "Urea",
      "keyword": "urea",
      "sort_key": 5,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },

    {
      "name": "ALP",
      "description": "Alkaline Phosphatase",
      "keyword": "alp",
      "sort_key": 1,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "ALT",
      "description": "Alanine Aminotransferase",
      "keyword": "alt",
      "sort_key": 2,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "AST",
      "description": "Aspartate Aminotransferase",
      "keyword": "ast",
      "sort_key": 3,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "ALB",
      "description": "Albumin",
      "keyword": "alb",
      "sort_key": 4,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "T-PROT",
      "description": "Total Protein",
      "keyword": "t-prot",
      "sort_key": 5,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "GGT",
      "description": "Gama Glutamyl Transferese",
      "keyword": "ggt",
      "sort_key": 6,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "D-BIL",
      "description": "Direct Bilirubin",
      "keyword": "d-bil",
      "sort_key": 7,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "T-BIL",
      "description": "Total Bilirubin",
      "keyword": "t-bil",
      "sort_key": 8,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },

    {
      "name": "TC",
      "description": "Total Cholesterol",
      "keyword": "tc",
      "sort_key": 1,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "LDL",
      "description": "Low density lipoprotein cholesterol",
      "keyword": "ldl",
      "sort_key": 2,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "HDL",
      "description": "High density lipoprotein cholesterol",
      "keyword": "hdl",
      "sort_key": 3,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Trig",
      "description": "Triglycerides",
      "keyword": "trig",
      "sort_key": 4,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },

    {
      "name": "WBC",
      "description": "White Blood Cells",
      "keyword": "wbc",
      "sort_key": 1,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "RBC",
      "description": "Red Blood Cells",
      "keyword": "rbc",
      "sort_key": 2,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "HGB",
      "description": "Haemoglobin",
      "keyword": "hbg",
      "sort_key": 3,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "HCT",
      "description": "Haematocrit",
      "keyword": "hct",
      "sort_key": 4,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "MVC",
      "description": "Mean Corpuscular Volume",
      "keyword": "mcv",
      "sort_key": 5,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "MCH",
      "description": "Mean Corpuscular Haemoglobin",
      "keyword": "mch",
      "sort_key": 6,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "MCHC",
      "description": "Mean Corpuscular Haemoglobin Concentration",
      "keyword": "mchc",
      "sort_key": 7,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "PLT",
      "description": "Platelets",
      "keyword": "plt",
      "sort_key": 8,
      "active": 1,
      "mappins": [{ "loinc": "" }]
    }
  ],
  "analyses_profiles": [
    {
      "name": "U&E's",
      "description": "Urea and Electrolytes",
      "analyses_names": ["Urea", "Creatinine", "K+", "Na-", "Cl-"],
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "LFT's",
      "description": "Liver Function Tests",
      "analyses_names": [
        "ALP",
        "ALT",
        "AST",
        "ALB",
        "T-PROT",
        "GGT",
        "D-BIL",
        "T-BIL"
      ],
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "Lipids",
      "description": "Lipid or Cholesterol Profile",
      "analyses_names": ["TC", "LDL", "HDL", "Trig"],
      "mappins": [{ "loinc": "" }]
    },
    {
      "name": "FBC",
      "description": "Full Blood Count",
      "analyses_names": [
        "WBC",
        "RBC",
        "HGB",
        "HCT",
        "MVC",
        "MCH",
        "MCHC",
        "PLT"
      ],
      "mappins": [{ "loinc": "" }]
    }
  ],
  "rejection_reasons": [
    "Sample clotted",
    "Sample details and form details not matching",
    "Sample spoilled",
    "Sample insufficient",
    "Sample haemolysed",
    "Sample too old"
  ]
}