bazarr/libs/ffsubsync/sklearn_shim.py

410 lines
14 KiB
Python

# -*- coding: utf-8 -*-
"""
This module borrows and adapts `Pipeline` from `sklearn.pipeline` and
`TransformerMixin` from `sklearn.base` in the scikit-learn framework
(commit hash d205638475ca542dc46862652e3bb0be663a8eac) to be precise).
Both are BSD licensed and allow for this sort of thing; attribution
is given as a comment above each class. License reproduced below:
BSD 3-Clause License
Copyright (c) 2007-2022 The scikit-learn developers.
All rights reserved.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright notice, this
list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright notice,
this list of conditions and the following disclaimer in the documentation
and/or other materials provided with the distribution.
* Neither the name of the copyright holder nor the names of its
contributors may be used to endorse or promote products derived from
this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
"""
from collections import defaultdict
from itertools import islice
from typing import Any, Callable, Optional
from typing_extensions import Protocol
class TransformerProtocol(Protocol):
fit: Callable[..., "TransformerProtocol"]
transform: Callable[[Any], Any]
# Author: Gael Varoquaux <gael.varoquaux@normalesup.org>
# License: BSD 3 clause
class TransformerMixin(TransformerProtocol):
"""Mixin class for all transformers."""
def fit_transform(self, X: Any, y: Optional[Any] = None, **fit_params: Any) -> Any:
"""
Fit to data, then transform it.
Fits transformer to X and y with optional parameters fit_params
and returns a transformed version of X.
Parameters
----------
X : ndarray of shape (n_samples, n_features)
Training set.
y : ndarray of shape (n_samples,), default=None
Target values.
**fit_params : dict
Additional fit parameters.
Returns
-------
X_new : ndarray array of shape (n_samples, n_features_new)
Transformed array.
"""
# non-optimized default implementation; override when a better
# method is possible for a given clustering algorithm
if y is None:
# fit method of arity 1 (unsupervised transformation)
return self.fit(X, **fit_params).transform(X)
else:
# fit method of arity 2 (supervised transformation)
return self.fit(X, y, **fit_params).transform(X)
# Author: Edouard Duchesnay
# Gael Varoquaux
# Virgile Fritsch
# Alexandre Gramfort
# Lars Buitinck
# License: BSD
class Pipeline:
def __init__(self, steps, verbose=False):
self.steps = steps
self.verbose = verbose
self._validate_steps()
def _validate_steps(self):
names, estimators = zip(*self.steps)
# validate estimators
transformers = estimators[:-1]
estimator = estimators[-1]
for t in transformers:
if t is None or t == "passthrough":
continue
if not (hasattr(t, "fit") or hasattr(t, "fit_transform")) or not hasattr(
t, "transform"
):
raise TypeError(
"All intermediate steps should be "
"transformers and implement fit and transform "
"or be the string 'passthrough' "
"'%s' (type %s) doesn't" % (t, type(t))
)
# We allow last estimator to be None as an identity transformation
if (
estimator is not None
and estimator != "passthrough"
and not hasattr(estimator, "fit")
):
raise TypeError(
"Last step of Pipeline should implement fit "
"or be the string 'passthrough'. "
"'%s' (type %s) doesn't" % (estimator, type(estimator))
)
def _iter(self, with_final=True, filter_passthrough=True):
"""
Generate (idx, (name, trans)) tuples from self.steps
When filter_passthrough is True, 'passthrough' and None transformers
are filtered out.
"""
stop = len(self.steps)
if not with_final:
stop -= 1
for idx, (name, trans) in enumerate(islice(self.steps, 0, stop)):
if not filter_passthrough:
yield idx, name, trans
elif trans is not None and trans != "passthrough":
yield idx, name, trans
def __len__(self) -> int:
"""
Returns the length of the Pipeline
"""
return len(self.steps)
def __getitem__(self, ind):
"""Returns a sub-pipeline or a single esimtator in the pipeline
Indexing with an integer will return an estimator; using a slice
returns another Pipeline instance which copies a slice of this
Pipeline. This copy is shallow: modifying (or fitting) estimators in
the sub-pipeline will affect the larger pipeline and vice-versa.
However, replacing a value in `step` will not affect a copy.
"""
if isinstance(ind, slice):
if ind.step not in (1, None):
raise ValueError("Pipeline slicing only supports a step of 1")
return self.__class__(self.steps[ind])
try:
name, est = self.steps[ind]
except TypeError:
# Not an int, try get step by name
return self.named_steps[ind]
return est
@property
def _estimator_type(self):
return self.steps[-1][1]._estimator_type
@property
def named_steps(self):
return dict(self.steps)
@property
def _final_estimator(self):
estimator = self.steps[-1][1]
return "passthrough" if estimator is None else estimator
def _log_message(self, step_idx):
if not self.verbose:
return None
name, step = self.steps[step_idx]
return "(step %d of %d) Processing %s" % (step_idx + 1, len(self.steps), name)
# Estimator interface
def _fit(self, X, y=None, **fit_params):
# shallow copy of steps - this should really be steps_
self.steps = list(self.steps)
self._validate_steps()
fit_params_steps = {name: {} for name, step in self.steps if step is not None}
for pname, pval in fit_params.items():
if "__" not in pname:
raise ValueError(
"Pipeline.fit does not accept the {} parameter. "
"You can pass parameters to specific steps of your "
"pipeline using the stepname__parameter format, e.g. "
"`Pipeline.fit(X, y, logisticregression__sample_weight"
"=sample_weight)`.".format(pname)
)
step, param = pname.split("__", 1)
fit_params_steps[step][param] = pval
for step_idx, name, transformer in self._iter(
with_final=False, filter_passthrough=False
):
if transformer is None or transformer == "passthrough":
continue
# Fit or load from cache the current transformer
X, fitted_transformer = _fit_transform_one(
transformer, X, y, None, **fit_params_steps[name]
)
# Replace the transformer of the step with the fitted
# transformer. This is necessary when loading the transformer
# from the cache.
self.steps[step_idx] = (name, fitted_transformer)
if self._final_estimator == "passthrough":
return X, {}
return X, fit_params_steps[self.steps[-1][0]]
def fit(self, X, y=None, **fit_params):
"""Fit the model
Fit all the transforms one after the other and transform the
data, then fit the transformed data using the final estimator.
Parameters
----------
X : iterable
Training data. Must fulfill input requirements of first step of the
pipeline.
y : iterable, default=None
Training targets. Must fulfill label requirements for all steps of
the pipeline.
**fit_params : dict of string -> object
Parameters passed to the ``fit`` method of each step, where
each parameter name is prefixed such that parameter ``p`` for step
``s`` has key ``s__p``.
Returns
-------
self : Pipeline
This estimator
"""
Xt, fit_params = self._fit(X, y, **fit_params)
if self._final_estimator != "passthrough":
self._final_estimator.fit(Xt, y, **fit_params)
return self
def fit_transform(self, X, y=None, **fit_params):
"""Fit the model and transform with the final estimator
Fits all the transforms one after the other and transforms the
data, then uses fit_transform on transformed data with the final
estimator.
Parameters
----------
X : iterable
Training data. Must fulfill input requirements of first step of the
pipeline.
y : iterable, default=None
Training targets. Must fulfill label requirements for all steps of
the pipeline.
**fit_params : dict of string -> object
Parameters passed to the ``fit`` method of each step, where
each parameter name is prefixed such that parameter ``p`` for step
``s`` has key ``s__p``.
Returns
-------
Xt : array-like of shape (n_samples, n_transformed_features)
Transformed samples
"""
last_step = self._final_estimator
Xt, fit_params = self._fit(X, y, **fit_params)
if last_step == "passthrough":
return Xt
if hasattr(last_step, "fit_transform"):
return last_step.fit_transform(Xt, y, **fit_params)
else:
return last_step.fit(Xt, y, **fit_params).transform(Xt)
@property
def transform(self):
"""Apply transforms, and transform with the final estimator
This also works where final estimator is ``None``: all prior
transformations are applied.
Parameters
----------
X : iterable
Data to transform. Must fulfill input requirements of first step
of the pipeline.
Returns
-------
Xt : array-like of shape (n_samples, n_transformed_features)
"""
# _final_estimator is None or has transform, otherwise attribute error
# XXX: Handling the None case means we can't use if_delegate_has_method
if self._final_estimator != "passthrough":
self._final_estimator.transform
return self._transform
def _transform(self, X):
Xt = X
for _, _, transform in self._iter():
Xt = transform.transform(Xt)
return Xt
@property
def classes_(self):
return self.steps[-1][-1].classes_
@property
def _pairwise(self):
# check if first estimator expects pairwise input
return getattr(self.steps[0][1], "_pairwise", False)
@property
def n_features_in_(self):
# delegate to first step (which will call _check_is_fitted)
return self.steps[0][1].n_features_in_
def _name_estimators(estimators):
"""Generate names for estimators."""
names = [
estimator if isinstance(estimator, str) else type(estimator).__name__.lower()
for estimator in estimators
]
namecount = defaultdict(int)
for est, name in zip(estimators, names):
namecount[name] += 1
for k, v in list(namecount.items()):
if v == 1:
del namecount[k]
for i in reversed(range(len(estimators))):
name = names[i]
if name in namecount:
names[i] += "-%d" % namecount[name]
namecount[name] -= 1
return list(zip(names, estimators))
def make_pipeline(*steps, **kwargs) -> Pipeline:
"""Construct a Pipeline from the given estimators.
This is a shorthand for the Pipeline constructor; it does not require, and
does not permit, naming the estimators. Instead, their names will be set
to the lowercase of their types automatically.
Parameters
----------
*steps : list of estimators.
verbose : bool, default=False
If True, the time elapsed while fitting each step will be printed as it
is completed.
Returns
-------
p : Pipeline
"""
verbose = kwargs.pop("verbose", False)
if kwargs:
raise TypeError(
'Unknown keyword arguments: "{}"'.format(list(kwargs.keys())[0])
)
return Pipeline(_name_estimators(steps), verbose=verbose)
def _transform_one(transformer, X, y, weight, **fit_params):
res = transformer.transform(X)
# if we have a weight for this transformer, multiply output
if weight is None:
return res
return res * weight
def _fit_transform_one(transformer, X, y, weight, **fit_params):
"""
Fits ``transformer`` to ``X`` and ``y``. The transformed result is returned
with the fitted transformer. If ``weight`` is not ``None``, the result will
be multiplied by ``weight``.
"""
if hasattr(transformer, "fit_transform"):
res = transformer.fit_transform(X, y, **fit_params)
else:
res = transformer.fit(X, y, **fit_params).transform(X)
if weight is None:
return res, transformer
return res * weight, transformer