mirror of
https://github.com/scinote-eln/scinote-web.git
synced 2025-10-06 03:46:39 +08:00
Code refactor part 1
This commit is contained in:
Zanz2
parent
205d3b3d8f
commit
835ac6910f
4 changed files with 382 additions and 446 deletions
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@ -968,296 +968,6 @@ class ProtocolsController < ApplicationController
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return false
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end
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# pio_stp_x means protocols io step (id of component) parser
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def pio_stp_1(iterating_key) # protocols io description parser
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br = '<br>'
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append =
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if iterating_key.present?
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br +
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pio_eval_len(
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sanitize_input(iterating_key),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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br
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else
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t('protocols.protocols_io_import.comp_append.missing_desc')
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end
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append
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end
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def pio_stp_6(iterating_key) # protocols io section(title) parser
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return pio_eval_title_len(sanitize_input(iterating_key)) if iterating_key.present?
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t('protocols.protocols_io_import.comp_append.missing_step')
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end
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def pio_stp_17(iterating_key) # protocols io expected result parser
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if iterating_key.present?
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append =
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t('protocols.protocols_io_import.comp_append.expected_result') +
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pio_eval_len(
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sanitize_input(iterating_key),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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'<br>'
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return append
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end
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''
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end
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def pio_stp_8(iterating_key) # protocols io software package parser
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if iterating_key['name'] &&
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iterating_key['developer'] &&
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iterating_key['version'] &&
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iterating_key['link'] &&
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iterating_key['repository'] &&
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iterating_key['os_name'] &&
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iterating_key['os_version']
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append = t('protocols.protocols_io_import.comp_append.soft_packg.title') +
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pio_eval_len(
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sanitize_input(iterating_key['name']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.soft_packg.dev') +
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pio_eval_len(
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sanitize_input(iterating_key['developer']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.soft_packg.vers') +
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pio_eval_len(
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sanitize_input(iterating_key['version']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.general_link') +
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pio_eval_len(
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sanitize_input(iterating_key['link']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.soft_packg.repo') +
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pio_eval_len(
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sanitize_input(iterating_key['repository']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.soft_packg.os') +
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pio_eval_len(
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sanitize_input(iterating_key['os_name']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) + ' , ' +
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pio_eval_len(
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sanitize_input(iterating_key['os_version']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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)
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return append
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end
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''
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end
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def pio_stp_9(iterating_key) # protocols io dataset parser
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if iterating_key['name'].present? &&
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iterating_key['link']
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append = t('protocols.protocols_io_import.comp_append.dataset.title') +
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pio_eval_len(
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sanitize_input(iterating_key['name']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.general_link') +
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pio_eval_len(
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sanitize_input(iterating_key['link']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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)
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return append
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end
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''
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end
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def pio_stp_15(iterating_key) # protocols io commands parser
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if iterating_key['name'].present? &&
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iterating_key['description'] &&
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iterating_key['os_name'] &&
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iterating_key['os_version']
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append = t('protocols.protocols_io_import.comp_append.command.title') +
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pio_eval_len(
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sanitize_input(iterating_key['name']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.command.desc') +
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pio_eval_len(
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sanitize_input(iterating_key['description']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.command.os') +
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pio_eval_len(
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sanitize_input(iterating_key['os_name']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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' , ' +
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pio_eval_len(
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sanitize_input(iterating_key['os_version']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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)
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return append
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end
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''
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end
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def pio_stp_18(iterating_key) # protocols io sub protocol parser
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if iterating_key['protocol_name'].present? &&
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iterating_key['full_name'] &&
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iterating_key['link']
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append =
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t(
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'protocols.protocols_io_import.comp_append.sub_protocol.title'
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) +
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pio_eval_len(
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sanitize_input(iterating_key['protocol_name']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t(
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'protocols.protocols_io_import.comp_append.sub_protocol.author'
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) +
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pio_eval_len(
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sanitize_input(iterating_key['full_name']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.general_link') +
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pio_eval_len(
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sanitize_input(iterating_key['link']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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)
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return append
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end
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''
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end
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def pio_stp_19(iterating_key) # protocols io safety information parser
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if iterating_key['body'].present? &&
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iterating_key['link']
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append =
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t(
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'protocols.protocols_io_import.comp_append.safety_infor.title'
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) +
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pio_eval_len(
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sanitize_input(iterating_key['body']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.general_link') +
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pio_eval_len(
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sanitize_input(iterating_key['link']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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)
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return append
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end
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''
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end
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def protocols_io_fill_desc(json_hash)
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description_array = %w[
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( before_start warning guidelines manuscript_citation publish_date
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vendor_name vendor_link keywords tags link created_on )
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]
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description_string =
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if json_hash['description'].present?
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'<strong>' + t('protocols.protocols_io_import.preview.prot_desc') +
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'</strong>' + pio_eval_len(
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sanitize_input(json_hash['description']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_MEDIUM
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).html_safe
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else
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'<strong>' + t('protocols.protocols_io_import.preview.prot_desc') +
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'</strong>' + t('protocols.protocols_io_import.comp_append.missing_desc')
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end
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description_string += '<br>'
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description_array.each do |e|
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if e == 'created_on' && json_hash[e].present?
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new_e = '<strong>' + e.humanize + '</strong>'
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description_string +=
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new_e.to_s + ': ' + pio_eval_len(
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sanitize_input(params['protocol']['created_at'].to_s),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) + '<br>'
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elsif e == 'tags' && json_hash[e].any? && json_hash[e] != ''
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new_e = '<strong>' + e.humanize + '</strong>'
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description_string +=
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new_e.to_s + ': '
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tags_length_checker = ''
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json_hash[e].each do |tag|
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tags_length_checker +=
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sanitize_input(tag['tag_name']) + ' , '
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end
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description_string += pio_eval_len(
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tags_length_checker,
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_MEDIUM
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)
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description_string += '<br>'
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elsif json_hash[e].present?
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new_e = '<strong>' + e.humanize + '</strong>'
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description_string +=
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new_e.to_s + ': ' +
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pio_eval_prot_desc(
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sanitize_input(json_hash[e]),
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e
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).html_safe + '<br>'
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end
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end
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description_string
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end
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def protocols_io_fill_step(original_json, newj)
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# newj = new json
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# (simple to map) id 1= step description, id 6= section (title),
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# id 17= expected result
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# (complex mapping with nested hashes) id 8 = software package,
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# id 9 = dataset, id 15 = command, id 18 = attached sub protocol
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# id 19= safety information ,
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# id 20= regents (materials, like scinote samples kind of)
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newj['0'] = {}
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newj['0']['position'] = 0
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newj['0']['name'] = 'Protocol info'
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@remaining = ProtocolsIoHelper::PIO_P_AVAILABLE_LENGTH
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newj['0']['tables'], table_str = protocolsio_string_to_table_element(
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sanitize_input(protocols_io_fill_desc(original_json).html_safe)
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)
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newj['0']['description'] = table_str
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original_json['steps'].each_with_index do |step, pos_orig| # loop over steps
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i = pos_orig + 1
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@remaining = ProtocolsIoHelper::PIO_S_AVAILABLE_LENGTH
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# position of step (first, second.... etc),
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newj[i.to_s] = {} # the json we will insert into db
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newj[i.to_s]['position'] = i
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newj[i.to_s]['description'] = '' unless newj[i.to_s].key?('description')
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newj[i.to_s]['name'] = '' unless newj[i.to_s].key?('name')
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step['components'].each do |key, value|
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# sometimes there are random index values as keys
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# instead of hashes, this is a workaround to that buggy json format
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key = value if value.class == Hash
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# append is the string that we append values into for description
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# pio_stp_x means protocols io step (id of component) parser
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case key['component_type_id']
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when '1'
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newj[i.to_s]['description'] += pio_stp_1(key['data'])
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when '6'
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newj[i.to_s]['name'] = pio_stp_6(key['data'])
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when '17'
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newj[i.to_s]['description'] += pio_stp_17(key['data'])
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when '8'
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newj[i.to_s]['description'] += pio_stp_8(key['source_data'])
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when '9'
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newj[i.to_s]['description'] += pio_stp_9(key['source_data'])
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when '15'
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newj[i.to_s]['description'] += pio_stp_15(key['source_data'])
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when '18'
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newj[i.to_s]['description'] += pio_stp_18(key['source_data'])
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when '19'
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newj[i.to_s]['description'] += pio_stp_19(key['source_data'])
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end # case end
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end # finished looping over step components
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newj[i.to_s]['tables'], table_str = protocolsio_string_to_table_element(
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newj[i.to_s]['description']
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)
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newj[i.to_s]['description'] = table_str
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end # steps
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newj
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end
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def move_protocol(action)
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rollbacked = false
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results = []
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@ -145,4 +145,316 @@ module ProtocolsIoHelper
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def close_open_html_tags(text)
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Nokogiri::HTML::DocumentFragment.parse(text).to_html
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end
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def prepare_for_view(attribute_text, size)
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case(size)
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when 'small'
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pio_eval_len(
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sanitize_input(string_html_table_remove(not_null(attribute_text))),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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)
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when 'medium'
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pio_eval_len(
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sanitize_input(string_html_table_remove(not_null(attribute_text))),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_MEDIUM
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)
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when 'big'
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pio_eval_len(
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sanitize_input(string_html_table_remove(not_null(attribute_text))),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_BIG
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)
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else
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end
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end
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# pio_stp_x means protocols io step (id of component) parser
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def pio_stp_1(iterating_key) # protocols io description parser
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br = '<br>'
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append =
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if iterating_key.present?
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br +
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pio_eval_len(
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sanitize_input(iterating_key),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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br
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else
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t('protocols.protocols_io_import.comp_append.missing_desc')
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end
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append
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end
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def pio_stp_6(iterating_key) # protocols io section(title) parser
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return pio_eval_title_len(sanitize_input(iterating_key)) if iterating_key.present?
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t('protocols.protocols_io_import.comp_append.missing_step')
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end
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def pio_stp_17(iterating_key) # protocols io expected result parser
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if iterating_key.present?
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append =
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t('protocols.protocols_io_import.comp_append.expected_result') +
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pio_eval_len(
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sanitize_input(iterating_key),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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'<br>'
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return append
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end
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''
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end
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def pio_stp_8(iterating_key) # protocols io software package parser
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if iterating_key['name'] &&
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iterating_key['developer'] &&
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iterating_key['version'] &&
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iterating_key['link'] &&
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iterating_key['repository'] &&
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iterating_key['os_name'] &&
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iterating_key['os_version']
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append = t('protocols.protocols_io_import.comp_append.soft_packg.title') +
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pio_eval_len(
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sanitize_input(iterating_key['name']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.soft_packg.dev') +
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pio_eval_len(
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sanitize_input(iterating_key['developer']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.soft_packg.vers') +
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pio_eval_len(
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sanitize_input(iterating_key['version']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.general_link') +
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pio_eval_len(
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sanitize_input(iterating_key['link']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.soft_packg.repo') +
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pio_eval_len(
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sanitize_input(iterating_key['repository']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.soft_packg.os') +
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pio_eval_len(
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sanitize_input(iterating_key['os_name']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) + ' , ' +
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pio_eval_len(
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sanitize_input(iterating_key['os_version']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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)
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return append
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end
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''
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end
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def pio_stp_9(iterating_key) # protocols io dataset parser
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if iterating_key['name'].present? &&
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iterating_key['link']
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append = t('protocols.protocols_io_import.comp_append.dataset.title') +
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pio_eval_len(
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sanitize_input(iterating_key['name']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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) +
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t('protocols.protocols_io_import.comp_append.general_link') +
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pio_eval_len(
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sanitize_input(iterating_key['link']),
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ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
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)
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return append
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end
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''
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end
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def pio_stp_15(iterating_key) # protocols io commands parser
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if iterating_key['name'].present? &&
|
||||
iterating_key['description'] &&
|
||||
iterating_key['os_name'] &&
|
||||
iterating_key['os_version']
|
||||
append = t('protocols.protocols_io_import.comp_append.command.title') +
|
||||
pio_eval_len(
|
||||
sanitize_input(iterating_key['name']),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
) +
|
||||
t('protocols.protocols_io_import.comp_append.command.desc') +
|
||||
pio_eval_len(
|
||||
sanitize_input(iterating_key['description']),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
) +
|
||||
t('protocols.protocols_io_import.comp_append.command.os') +
|
||||
pio_eval_len(
|
||||
sanitize_input(iterating_key['os_name']),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
) +
|
||||
' , ' +
|
||||
pio_eval_len(
|
||||
sanitize_input(iterating_key['os_version']),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
)
|
||||
return append
|
||||
end
|
||||
''
|
||||
end
|
||||
|
||||
def pio_stp_18(iterating_key) # protocols io sub protocol parser
|
||||
if iterating_key['protocol_name'].present? &&
|
||||
iterating_key['full_name'] &&
|
||||
iterating_key['link']
|
||||
append =
|
||||
t(
|
||||
'protocols.protocols_io_import.comp_append.sub_protocol.title'
|
||||
) +
|
||||
pio_eval_len(
|
||||
sanitize_input(iterating_key['protocol_name']),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
) +
|
||||
t(
|
||||
'protocols.protocols_io_import.comp_append.sub_protocol.author'
|
||||
) +
|
||||
pio_eval_len(
|
||||
sanitize_input(iterating_key['full_name']),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
) +
|
||||
t('protocols.protocols_io_import.comp_append.general_link') +
|
||||
pio_eval_len(
|
||||
sanitize_input(iterating_key['link']),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
)
|
||||
return append
|
||||
end
|
||||
''
|
||||
end
|
||||
|
||||
def pio_stp_19(iterating_key) # protocols io safety information parser
|
||||
if iterating_key['body'].present? &&
|
||||
iterating_key['link']
|
||||
append =
|
||||
t(
|
||||
'protocols.protocols_io_import.comp_append.safety_infor.title'
|
||||
) +
|
||||
pio_eval_len(
|
||||
sanitize_input(iterating_key['body']),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
) +
|
||||
t('protocols.protocols_io_import.comp_append.general_link') +
|
||||
pio_eval_len(
|
||||
sanitize_input(iterating_key['link']),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
)
|
||||
return append
|
||||
end
|
||||
''
|
||||
end
|
||||
|
||||
def protocols_io_fill_desc(json_hash)
|
||||
description_array = %w[
|
||||
( before_start warning guidelines manuscript_citation publish_date
|
||||
vendor_name vendor_link keywords tags link created_on )
|
||||
]
|
||||
description_string =
|
||||
if json_hash['description'].present?
|
||||
'<strong>' + t('protocols.protocols_io_import.preview.prot_desc') +
|
||||
'</strong>' + pio_eval_len(
|
||||
sanitize_input(json_hash['description']),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_MEDIUM
|
||||
).html_safe
|
||||
else
|
||||
'<strong>' + t('protocols.protocols_io_import.preview.prot_desc') +
|
||||
'</strong>' + t('protocols.protocols_io_import.comp_append.missing_desc')
|
||||
end
|
||||
description_string += '<br>'
|
||||
description_array.each do |e|
|
||||
if e == 'created_on' && json_hash[e].present?
|
||||
new_e = '<strong>' + e.humanize + '</strong>'
|
||||
description_string +=
|
||||
new_e.to_s + ': ' + pio_eval_len(
|
||||
sanitize_input(params['protocol']['created_at'].to_s),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
) + '<br>'
|
||||
elsif e == 'tags' && json_hash[e].any? && json_hash[e] != ''
|
||||
new_e = '<strong>' + e.humanize + '</strong>'
|
||||
description_string +=
|
||||
new_e.to_s + ': '
|
||||
tags_length_checker = ''
|
||||
json_hash[e].each do |tag|
|
||||
tags_length_checker +=
|
||||
sanitize_input(tag['tag_name']) + ' , '
|
||||
end
|
||||
description_string += pio_eval_len(
|
||||
tags_length_checker,
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_MEDIUM
|
||||
)
|
||||
description_string += '<br>'
|
||||
elsif json_hash[e].present?
|
||||
new_e = '<strong>' + e.humanize + '</strong>'
|
||||
description_string +=
|
||||
new_e.to_s + ': ' +
|
||||
pio_eval_prot_desc(
|
||||
sanitize_input(json_hash[e]),
|
||||
e
|
||||
).html_safe + '<br>'
|
||||
end
|
||||
end
|
||||
description_string
|
||||
end
|
||||
|
||||
def protocols_io_fill_step(original_json, newj)
|
||||
# newj = new json
|
||||
# (simple to map) id 1= step description, id 6= section (title),
|
||||
# id 17= expected result
|
||||
# (complex mapping with nested hashes) id 8 = software package,
|
||||
# id 9 = dataset, id 15 = command, id 18 = attached sub protocol
|
||||
# id 19= safety information ,
|
||||
# id 20= regents (materials, like scinote samples kind of)
|
||||
newj['0'] = {}
|
||||
newj['0']['position'] = 0
|
||||
newj['0']['name'] = 'Protocol info'
|
||||
@remaining = ProtocolsIoHelper::PIO_P_AVAILABLE_LENGTH
|
||||
newj['0']['tables'], table_str = protocolsio_string_to_table_element(
|
||||
sanitize_input(protocols_io_fill_desc(original_json).html_safe)
|
||||
)
|
||||
newj['0']['description'] = table_str
|
||||
original_json['steps'].each_with_index do |step, pos_orig| # loop over steps
|
||||
i = pos_orig + 1
|
||||
@remaining = ProtocolsIoHelper::PIO_S_AVAILABLE_LENGTH
|
||||
# position of step (first, second.... etc),
|
||||
newj[i.to_s] = {} # the json we will insert into db
|
||||
newj[i.to_s]['position'] = i
|
||||
newj[i.to_s]['description'] = '' unless newj[i.to_s].key?('description')
|
||||
newj[i.to_s]['name'] = '' unless newj[i.to_s].key?('name')
|
||||
step['components'].each do |key, value|
|
||||
# sometimes there are random index values as keys
|
||||
# instead of hashes, this is a workaround to that buggy json format
|
||||
key = value if value.class == Hash
|
||||
# append is the string that we append values into for description
|
||||
# pio_stp_x means protocols io step (id of component) parser
|
||||
case key['component_type_id']
|
||||
when '1'
|
||||
newj[i.to_s]['description'] += pio_stp_1(key['data'])
|
||||
when '6'
|
||||
newj[i.to_s]['name'] = pio_stp_6(key['data'])
|
||||
when '17'
|
||||
newj[i.to_s]['description'] += pio_stp_17(key['data'])
|
||||
when '8'
|
||||
newj[i.to_s]['description'] += pio_stp_8(key['source_data'])
|
||||
when '9'
|
||||
newj[i.to_s]['description'] += pio_stp_9(key['source_data'])
|
||||
when '15'
|
||||
newj[i.to_s]['description'] += pio_stp_15(key['source_data'])
|
||||
when '18'
|
||||
newj[i.to_s]['description'] += pio_stp_18(key['source_data'])
|
||||
when '19'
|
||||
newj[i.to_s]['description'] += pio_stp_19(key['source_data'])
|
||||
end # case end
|
||||
end # finished looping over step components
|
||||
newj[i.to_s]['tables'], table_str = protocolsio_string_to_table_element(
|
||||
newj[i.to_s]['description']
|
||||
)
|
||||
newj[i.to_s]['description'] = table_str
|
||||
end # steps
|
||||
newj
|
||||
end
|
||||
|
||||
end
|
||||
|
|
|
|||
|
|
@ -22,78 +22,52 @@
|
|||
<% if json_object['description'].present? %>
|
||||
<% prot_info_string += (json_object['description']) %>
|
||||
<strong><%= t('protocols.protocols_io_import.preview.prot_desc') %></strong>
|
||||
<% description = pio_eval_len(
|
||||
sanitize_input(string_html_table_remove(json_object['description'])),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_MEDIUM) %>
|
||||
<%= description.html_safe %><br>
|
||||
<%= prepare_for_view(json_object['description'],'medium').html_safe %>
|
||||
<br>
|
||||
<% end %>
|
||||
<% if json_object['before_start'].present? %>
|
||||
<% prot_info_string += (json_object['before_start']) %>
|
||||
<strong><%= t('protocols.protocols_io_import.preview.b_s_p') %></strong>
|
||||
<% before_start = pio_eval_len(
|
||||
sanitize_input(string_html_table_remove(json_object['before_start'])),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_MEDIUM
|
||||
) %>
|
||||
<%= before_start.html_safe %><br>
|
||||
<%= prepare_for_view(json_object['before_start'],'medium').html_safe %>
|
||||
<br>
|
||||
<% end %>
|
||||
<% if json_object['warning'].present? %>
|
||||
<% prot_info_string += (json_object['warning']) %>
|
||||
<strong><%= t('protocols.protocols_io_import.preview.warn') %></strong>
|
||||
<% sft_warning = pio_eval_len(
|
||||
sanitize_input(string_html_table_remove(json_object['warning'])),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_MEDIUM
|
||||
) %>
|
||||
<%= sft_warning.html_safe%><br>
|
||||
<%= prepare_for_view(json_object['warning'],'medium').html_safe %>
|
||||
<br>
|
||||
<% end %>
|
||||
<% if json_object['guidelines'].present? %>
|
||||
<% prot_info_string += (json_object['guidelines']) %>
|
||||
<strong><%= t('protocols.protocols_io_import.preview.guideln') %></strong>
|
||||
<% guidelines = pio_eval_len(
|
||||
sanitize_input(string_html_table_remove(json_object['guidelines'])),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_MEDIUM
|
||||
) %>
|
||||
<%= guidelines.html_safe %><br>
|
||||
<%= prepare_for_view(json_object['guidelines'],'medium').html_safe %>
|
||||
<br>
|
||||
<% end %>
|
||||
<% if json_object['manuscript_citation'].present? %>
|
||||
<% prot_info_string += (json_object['manuscript_citation']) %>
|
||||
<strong><%= t('protocols.protocols_io_import.preview.manu_cit') %></strong>
|
||||
<% manu_cit = pio_eval_len(
|
||||
sanitize_input(string_html_table_remove(json_object['manuscript_citation'])),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_MEDIUM
|
||||
) %>
|
||||
<%= manu_cit.html_safe %><br>
|
||||
<%= prepare_for_view(json_object['manuscript_citation'],'medium').html_safe %>
|
||||
<br>
|
||||
<% end %>
|
||||
<% if json_object['publish_date'].present? %>
|
||||
<strong><%= t('protocols.protocols_io_import.preview.pbl_date') %></strong>
|
||||
<% pbl_date = pio_eval_len(
|
||||
sanitize_input(json_object['publish_date']),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
) %>
|
||||
<%= pbl_date.html_safe %><br>
|
||||
<%= prepare_for_view(json_object['publish_date'],'small').html_safe %>
|
||||
<br>
|
||||
<% end %>
|
||||
<% if json_object['vendor_name'].present? %>
|
||||
<strong><%= t('protocols.protocols_io_import.preview.vnd_name') %></strong>
|
||||
<% vnd_name = pio_eval_len(
|
||||
sanitize_input(json_object['vendor_name']),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_MEDIUM
|
||||
) %>
|
||||
<%= vnd_name.html_safe %><br>
|
||||
<%= prepare_for_view(json_object['vendor_name'],'medium').html_safe %>
|
||||
<br>
|
||||
<% end %>
|
||||
<% if json_object['vendor_link'].present? %>
|
||||
<strong><%= t('protocols.protocols_io_import.preview.vnd_link') %></strong>
|
||||
<% vnd_link = pio_eval_len(
|
||||
sanitize_input(json_object['vendor_link']),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_BIG
|
||||
) %>
|
||||
<%= vnd_link.html_safe %><br>
|
||||
<%= prepare_for_view(json_object['vendor_link'],'big').html_safe %>
|
||||
<br>
|
||||
<% end %>
|
||||
<% if json_object['keywords'].present? %>
|
||||
<strong><%= t('protocols.protocols_io_import.preview.key_wrd') %></strong>
|
||||
<% keywords = pio_eval_len(
|
||||
sanitize_input(json_object['keywords']),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_MEDIUM
|
||||
) %>
|
||||
<%= keywords.html_safe %><br>
|
||||
<%= prepare_for_view(json_object['keywords'],'medium').html_safe %>
|
||||
<br>
|
||||
<% end %>
|
||||
<% if json_object['tags'].present? %>
|
||||
<strong><%= t('protocols.protocols_io_import.preview.tags') %></strong>
|
||||
|
|
@ -101,19 +75,13 @@
|
|||
<% json_object['tags'].each do |tag| %>
|
||||
<% string_of_tags += tag['tag_name']+' , ' %>
|
||||
<% end %>
|
||||
<% tags = pio_eval_len(
|
||||
sanitize_input(string_of_tags),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_MEDIUM
|
||||
)%>
|
||||
<%= tags.html_safe %><br>
|
||||
<%= prepare_for_view(string_of_tags,'medium').html_safe %>
|
||||
<br>
|
||||
<% end %>
|
||||
<% if json_object['link'].present? %>
|
||||
<strong><%= t('protocols.protocols_io_import.preview.p_link') %></strong>
|
||||
<% link = pio_eval_len(
|
||||
sanitize_input(json_object['link']).html_safe,
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_BIG
|
||||
) %>
|
||||
<%= link.html_safe %><br>
|
||||
<%= prepare_for_view(json_object['link'],'big').html_safe %>
|
||||
<br>
|
||||
<% end %>
|
||||
<% tables, garbage = protocolsio_string_to_table_element(prot_info_string) %>
|
||||
<% if tables.present? %>
|
||||
|
|
|
|||
|
|
@ -41,20 +41,15 @@
|
|||
<% case key['component_type_id']
|
||||
when '1' %>
|
||||
<% step_info_string += (key['data']) %>
|
||||
<br><strong><%= t('protocols.protocols_io_import.preview.strng_s_desc') %></strong>
|
||||
<% s_desc = pio_eval_len(
|
||||
sanitize_input(string_html_table_remove(key['data'])),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
)%>
|
||||
<%= s_desc.html_safe %><br>
|
||||
<br>
|
||||
<strong><%= t('protocols.protocols_io_import.preview.strng_s_desc') %></strong>
|
||||
<%= prepare_for_view(key['data'],'small').html_safe %>
|
||||
<br>
|
||||
<% when '17' %>
|
||||
<% step_info_string += (key['data']) %>
|
||||
<br><strong><%= t('protocols.protocols_io_import.preview.s_exp_res') %></strong>
|
||||
<% s_exp_res = pio_eval_len(
|
||||
sanitize_input(string_html_table_remove(key['data'])),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
)%>
|
||||
<%= s_exp_res.html_safe %>
|
||||
<br>
|
||||
<strong><%= t('protocols.protocols_io_import.preview.s_exp_res') %></strong>
|
||||
<%= prepare_for_view(key['data'],'small').html_safe %>
|
||||
<br>
|
||||
<% end %>
|
||||
<% elsif key && whitelist_complex.include?(key['component_type_id']) %>
|
||||
|
|
@ -63,112 +58,63 @@
|
|||
<% step_info_string += not_null(key['source_data']['name']) %>
|
||||
<br>
|
||||
<strong><%= not_null(key['name'])+': ' %></strong>
|
||||
<%= pio_eval_len(
|
||||
sanitize_input(string_html_table_remove(not_null(key['source_data']['name'])).html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe %>
|
||||
<br><%= t('protocols.protocols_io_import.preview.dev') %>
|
||||
<%= pio_eval_len(
|
||||
sanitize_input(not_null(key['source_data']['developer']).html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe %>
|
||||
<br><%= t('protocols.protocols_io_import.preview.vers') %>
|
||||
<%= pio_eval_len(
|
||||
sanitize_input(not_null(key['source_data']['version']).html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe %>
|
||||
<br><%= t('protocols.protocols_io_import.preview.s_link') %>
|
||||
<%= pio_eval_len(
|
||||
sanitize_input(not_null(key['source_data']['link']).html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe %>
|
||||
<br><%= t('protocols.protocols_io_import.preview.repo') %>
|
||||
<%= pio_eval_len(
|
||||
sanitize_input(not_null(key['source_data']['repository']).html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe %>
|
||||
<br><%= t('protocols.protocols_io_import.preview.os') %>
|
||||
<%= pio_eval_len(
|
||||
sanitize_input(not_null(key['source_data']['os_name']).html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe+
|
||||
' , '+
|
||||
pio_eval_len(
|
||||
sanitize_input(not_null(key['source_data']['os_version']).html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe %>
|
||||
<%= prepare_for_view(key['source_data']['name'],'small').html_safe %>
|
||||
<br>
|
||||
<%= t('protocols.protocols_io_import.preview.dev') %>
|
||||
<%= prepare_for_view(key['source_data']['developer'],'small').html_safe %>
|
||||
<br>
|
||||
<%= t('protocols.protocols_io_import.preview.vers') %>
|
||||
<%= prepare_for_view(key['source_data']['version'],'small').html_safe %>
|
||||
<br>
|
||||
<%= t('protocols.protocols_io_import.preview.s_link') %>
|
||||
<%= prepare_for_view(key['source_data']['link'],'small').html_safe %>
|
||||
<br>
|
||||
<%= t('protocols.protocols_io_import.preview.repo') %>
|
||||
<%= prepare_for_view(key['source_data']['repository'],'small').html_safe %>
|
||||
<br>
|
||||
<%= t('protocols.protocols_io_import.preview.os') %>
|
||||
<%= prepare_for_view(key['source_data']['os_name'],'small').html_safe + ' , ' +
|
||||
prepare_for_view(key['source_data']['os_version'],'small').html_safe %>
|
||||
<% when '9'%>
|
||||
<% step_info_string += not_null(key['source_data']['name']) %>
|
||||
<br>
|
||||
<strong><%= not_null(key['name'])+': ' %></strong>
|
||||
<%= pio_eval_len(
|
||||
sanitize_input(string_html_table_remove(not_null(key['source_data']['name'])).html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe %>
|
||||
<br><%= t('protocols.protocols_io_import.preview.s_link') %>
|
||||
<%= pio_eval_len(
|
||||
sanitize_input(not_null(key['source_data']['link']).html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe %>
|
||||
<%= prepare_for_view(key['source_data']['name'],'small').html_safe %>
|
||||
<br>
|
||||
<%= t('protocols.protocols_io_import.preview.s_link') %>
|
||||
<%= prepare_for_view(key['source_data']['link'],'small').html_safe %>
|
||||
<% when '15'%>
|
||||
<% step_info_string += not_null(key['source_data']['description']) %>
|
||||
<br>
|
||||
<strong><%= key['name']+': ' %></strong>
|
||||
<% s_cmd = pio_eval_len(
|
||||
sanitize_input(not_null(key['source_data']['name'])),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
) %>
|
||||
<%= s_cmd.html_safe %>
|
||||
<br><%= t('protocols.protocols_io_import.preview.s_desc') %>
|
||||
<% s_cmd_desc = pio_eval_len(
|
||||
sanitize_input(string_html_table_remove(not_null(key['source_data']['description']))),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
) %>
|
||||
<% s_cmd_desc.html_safe %>
|
||||
<br><%= t('protocols.protocols_io_import.preview.os') %>
|
||||
<%= pio_eval_len(
|
||||
sanitize_input(not_null(key['source_data']['os_name']).html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe +
|
||||
' , '+
|
||||
pio_eval_len(
|
||||
sanitize_input(not_null(key['source_data']['os_version']).html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe %>
|
||||
<%= prepare_for_view(key['source_data']['name'],'small').html_safe %>
|
||||
<br>
|
||||
<%= t('protocols.protocols_io_import.preview.s_desc') %>
|
||||
<%= prepare_for_view(key['source_data']['description'],'small').html_safe %>
|
||||
<br>
|
||||
<%= t('protocols.protocols_io_import.preview.os') %>
|
||||
<%= prepare_for_view(key['source_data']['os_name'],'small').html_safe + ' , ' +
|
||||
prepare_for_view(key['source_data']['os_version'],'small').html_safe %>
|
||||
<% when '18'%>
|
||||
<br><strong><%= t('protocols.protocols_io_import.preview.sub_prot') %></strong>
|
||||
<%= pio_eval_len(
|
||||
sanitize_input(not_null(key['source_data']['protocol_name']).html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe %>
|
||||
<br><%= t('protocols.protocols_io_import.preview.auth') %>
|
||||
<%= pio_eval_len(
|
||||
sanitize_input(not_null(key['source_data']['full_name']).html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe %>
|
||||
<br>
|
||||
<strong><%= t('protocols.protocols_io_import.preview.sub_prot') %></strong>
|
||||
<%= prepare_for_view(key['source_data']['protocol_name'],'small').html_safe %>
|
||||
<br>
|
||||
<%= t('protocols.protocols_io_import.preview.auth') %>
|
||||
<%= prepare_for_view(key['source_data']['full_name'],'small').html_safe %>
|
||||
<br>
|
||||
<% if key['source_data']['link'].present? %>
|
||||
<%= t('protocols.protocols_io_import.preview.s_nobr_link') %>
|
||||
<%= pio_eval_len(
|
||||
sanitize_input(key['source_data']['link'].html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe %>
|
||||
<%= prepare_for_view(key['source_data']['link'],'small').html_safe %>
|
||||
<% end %>
|
||||
<% when '19'%>
|
||||
<% step_info_string += not_null(key['source_data']['body']) %>
|
||||
<br>
|
||||
<strong><%= key['name']+': ' %></strong>
|
||||
<% s_safety = pio_eval_len(
|
||||
sanitize_input(string_html_table_remove(not_null(key['source_data']['body']))),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
) %>
|
||||
<%= s_safety.html_safe %>
|
||||
<br><%= t('protocols.protocols_io_import.preview.s_link') %>
|
||||
<%= pio_eval_len(
|
||||
sanitize_input(not_null(key['source_data']['link']).html_safe),
|
||||
ProtocolsIoHelper::PIO_ELEMENT_RESERVED_LENGTH_SMALL
|
||||
).html_safe %>
|
||||
<% when '20'%>
|
||||
<strong><%= not_null(key['name'])+': ' %></strong>
|
||||
<%= prepare_for_view(key['source_data']['body'],'small').html_safe %>
|
||||
<br>
|
||||
<%= t('protocols.protocols_io_import.preview.s_link') %>
|
||||
<%= prepare_for_view(key['source_data']['link'],'small').html_safe %>
|
||||
<% else %>
|
||||
<% end #case if%>
|
||||
<% end #inner if%>
|
||||
|
|
|
|||
Loading…
Add table
Reference in a new issue