From b1f9e7f1ca842f08b17f52d5716603093b60cdf7 Mon Sep 17 00:00:00 2001
From: aignatov-bio <47317017+aignatov-bio@users.noreply.github.com>
Date: Thu, 5 Sep 2019 08:33:53 +0200
Subject: [PATCH] Fix global activities jsonb field [SCI-3830] (#2030)

* Fix global activities jsonb field

* Fix tests
---
 app/helpers/global_activities_helper.rb       |   22 +-
 app/models/concerns/activity_values_model.rb  |    1 -
 .../references/_experiment.html.erb           |    2 +-
 .../references/_my_module.html.erb            |    2 +-
 .../references/_project.html.erb              |    4 +-
 .../references/_protocol.html.erb             |    4 +-
 .../references/_report.html.erb               |    4 +-
 .../references/_repository.html.erb           |    4 +-
 .../references/_result.html.erb               |    2 +-
 .../references/_team.html.erb                 |    4 +-
 ...145834_convert_activities_json_to_jsonb.rb |   10 +
 db/schema.rb                                  | 1108 +++++++++++++++++
 spec/models/activity_spec.rb                  |    6 +-
 .../create_activity_service_spec.rb           |    2 +-
 14 files changed, 1146 insertions(+), 29 deletions(-)
 create mode 100644 db/migrate/20190903145834_convert_activities_json_to_jsonb.rb
 create mode 100644 db/schema.rb

diff --git a/app/helpers/global_activities_helper.rb b/app/helpers/global_activities_helper.rb
index 6956696f2..decc6a13c 100644
--- a/app/helpers/global_activities_helper.rb
+++ b/app/helpers/global_activities_helper.rb
@@ -7,12 +7,12 @@ module GlobalActivitiesHelper
 
   def generate_activity_content(activity, no_links = false)
     parameters = {}
-    activity.values[:message_items].each do |key, value|
+    activity.message_items.each do |key, value|
       parameters[key] =
         if value.is_a? String
           value
-        elsif value[:type] == 'Time' # use saved date for printing
-          l(Time.at(value[:value]), format: :full_date)
+        elsif value['type'] == 'Time' # use saved date for printing
+          l(Time.at(value['value']), format: :full_date)
         else
           no_links ? generate_name(value) : generate_link(value, activity)
         end
@@ -21,15 +21,15 @@ module GlobalActivitiesHelper
       I18n.t("global_activities.content.#{activity.type_of}_html", parameters.symbolize_keys),
       team: activity.team
     )
-  rescue StandardError => ex
-    Rails.logger.error(ex.message)
-    Rails.logger.error(ex.backtrace.join("\n"))
+  rescue StandardError => e
+    Rails.logger.error(e.message)
+    Rails.logger.error(e.backtrace.join("\n"))
     I18n.t('global_activities.index.content_generation_error', activity_id: activity.id)
   end
 
   def generate_link(message_item, activity)
-    obj = message_item[:type].constantize.find_by_id(message_item[:id])
-    return message_item[:value] unless obj
+    obj = message_item['type'].constantize.find_by_id(message_item['id'])
+    return message_item['value'] unless obj
 
     current_value = generate_name(message_item)
     team = activity.team
@@ -98,10 +98,10 @@ module GlobalActivitiesHelper
   end
 
   def generate_name(message_item)
-    obj = message_item[:type].constantize.find_by_id(message_item[:id])
-    return message_item[:value] unless obj
+    obj = message_item['type'].constantize.find_by_id(message_item['id'])
+    return message_item['value'] unless obj
 
-    value = obj.public_send(message_item[:value_for] || 'name')
+    value = obj.public_send(message_item['value_for'] || 'name')
     value = I18n.t('global_activities.index.no_name') if value.blank?
 
     value
diff --git a/app/models/concerns/activity_values_model.rb b/app/models/concerns/activity_values_model.rb
index 825be5317..1bc7c0caa 100644
--- a/app/models/concerns/activity_values_model.rb
+++ b/app/models/concerns/activity_values_model.rb
@@ -8,7 +8,6 @@ module ActivityValuesModel
   # rubocop:enable Style/ClassVars
 
   included do
-    serialize :values, JsonbHashSerializer
     after_initialize :init_default_values, if: :new_record?
     before_create :add_user
   end
diff --git a/app/views/global_activities/references/_experiment.html.erb b/app/views/global_activities/references/_experiment.html.erb
index 6f1b748c4..5c8842700 100644
--- a/app/views/global_activities/references/_experiment.html.erb
+++ b/app/views/global_activities/references/_experiment.html.erb
@@ -9,7 +9,7 @@
                             subject.name&.truncate(Constants::NAME_TRUNCATION_LENGTH),
                             title: subject.name) %>
   <% else %>
-    <% name = subject&.name || breadcrumbs[:experiment] %>
+    <% name = subject&.name || breadcrumbs['experiment'] %>
     <span title="<%= name %>">
       <%= name&.truncate(Constants::NAME_TRUNCATION_LENGTH) %>
     </span>
diff --git a/app/views/global_activities/references/_my_module.html.erb b/app/views/global_activities/references/_my_module.html.erb
index 0cbcd11a8..c29f133c9 100644
--- a/app/views/global_activities/references/_my_module.html.erb
+++ b/app/views/global_activities/references/_my_module.html.erb
@@ -17,7 +17,7 @@
                             subject.name&.truncate(Constants::NAME_TRUNCATION_LENGTH),
                             title: subject.name) %>
   <% else %>
-    <% name = subject&.name || breadcrumbs[:my_module] %>
+    <% name = subject&.name || breadcrumbs['my_module'] %>
     <span title="<%= name %>">
       <%= name&.truncate(Constants::NAME_TRUNCATION_LENGTH) %>
     </span>
diff --git a/app/views/global_activities/references/_project.html.erb b/app/views/global_activities/references/_project.html.erb
index 30602fbe3..f515afed9 100644
--- a/app/views/global_activities/references/_project.html.erb
+++ b/app/views/global_activities/references/_project.html.erb
@@ -9,8 +9,8 @@
                             subject.name&.truncate(Constants::NAME_TRUNCATION_LENGTH),
                             title: subject.name) %>
   <% else %>
-    <span title="<%= breadcrumbs[:project] %>">
-      <%= breadcrumbs[:project]&.truncate(Constants::NAME_TRUNCATION_LENGTH) %>
+    <span title="<%= breadcrumbs['project'] %>">
+      <%= breadcrumbs['project']&.truncate(Constants::NAME_TRUNCATION_LENGTH) %>
     </span>
   <% end %>
 </div>
diff --git a/app/views/global_activities/references/_protocol.html.erb b/app/views/global_activities/references/_protocol.html.erb
index c2605e4b4..74bb2315e 100644
--- a/app/views/global_activities/references/_protocol.html.erb
+++ b/app/views/global_activities/references/_protocol.html.erb
@@ -21,8 +21,8 @@
 <% else %>
   <div class="ga-breadcrumb">
     <span class="fas fa-edit"></span>
-    <span title="<%= breadcrumbs[:protocol] %>">
-      <%= breadcrumbs[:protocol]&.truncate(Constants::NAME_TRUNCATION_LENGTH) %>
+    <span title="<%= breadcrumbs['protocol'] %>">
+      <%= breadcrumbs['protocol']&.truncate(Constants::NAME_TRUNCATION_LENGTH) %>
     </span>
   </div>
 <% end %>
diff --git a/app/views/global_activities/references/_report.html.erb b/app/views/global_activities/references/_report.html.erb
index ad8244a64..ede016a46 100644
--- a/app/views/global_activities/references/_report.html.erb
+++ b/app/views/global_activities/references/_report.html.erb
@@ -8,8 +8,8 @@
                             subject.name&.truncate(Constants::NAME_TRUNCATION_LENGTH),
                             title: subject.name) %>
   <% else %>
-    <span title="<%= breadcrumbs[:report] %>">
-      <%= breadcrumbs[:report]&.truncate(Constants::NAME_TRUNCATION_LENGTH) %>
+    <span title="<%= breadcrumbs['report'] %>">
+      <%= breadcrumbs['report']&.truncate(Constants::NAME_TRUNCATION_LENGTH) %>
     </span>
   <% end %>
 </div>
diff --git a/app/views/global_activities/references/_repository.html.erb b/app/views/global_activities/references/_repository.html.erb
index b8b3ff035..13580ce4d 100644
--- a/app/views/global_activities/references/_repository.html.erb
+++ b/app/views/global_activities/references/_repository.html.erb
@@ -8,8 +8,8 @@
                             subject.name&.truncate(Constants::NAME_TRUNCATION_LENGTH),
                             title: subject.name) %>
   <% else %>
-    <span title="<%= breadcrumbs[:repository] %>">
-      <%= breadcrumbs[:repository]&.truncate(Constants::NAME_TRUNCATION_LENGTH) %>
+    <span title="<%= breadcrumbs['repository'] %>">
+      <%= breadcrumbs['repository']&.truncate(Constants::NAME_TRUNCATION_LENGTH) %>
     </span>
   <% end %>
 </div>
diff --git a/app/views/global_activities/references/_result.html.erb b/app/views/global_activities/references/_result.html.erb
index a874ddfa8..29f4c0cd7 100644
--- a/app/views/global_activities/references/_result.html.erb
+++ b/app/views/global_activities/references/_result.html.erb
@@ -10,7 +10,7 @@
                             subject.name&.truncate(Constants::NAME_TRUNCATION_LENGTH),
                             title: subject.name) %>
   <% else %>
-    <% name = subject&.name || breadcrumbs[:result] %>
+    <% name = subject&.name || breadcrumbs['result'] %>
     <span title="<%= name %>">
       <%= name&.truncate(Constants::NAME_TRUNCATION_LENGTH) %>
     </span>
diff --git a/app/views/global_activities/references/_team.html.erb b/app/views/global_activities/references/_team.html.erb
index 451508059..e257869ac 100644
--- a/app/views/global_activities/references/_team.html.erb
+++ b/app/views/global_activities/references/_team.html.erb
@@ -6,8 +6,8 @@
                             subject.name&.truncate(Constants::NAME_TRUNCATION_LENGTH),
                             title: subject.name %>
   <% else %>
-    <span title="<%= breadcrumbs[:team] %>">
-      <%= breadcrumbs[:team]&.truncate(Constants::NAME_TRUNCATION_LENGTH) %>
+    <span title="<%= breadcrumbs['team'] %>">
+      <%= breadcrumbs['team']&.truncate(Constants::NAME_TRUNCATION_LENGTH) %>
     </span>
   <% end %>
 </div>
diff --git a/db/migrate/20190903145834_convert_activities_json_to_jsonb.rb b/db/migrate/20190903145834_convert_activities_json_to_jsonb.rb
new file mode 100644
index 000000000..681393d8f
--- /dev/null
+++ b/db/migrate/20190903145834_convert_activities_json_to_jsonb.rb
@@ -0,0 +1,10 @@
+# frozen_string_literal: true
+
+class ConvertActivitiesJsonToJsonb < ActiveRecord::Migration[5.2]
+  def change
+    change_column :activities, :values, 'jsonb USING CAST(values AS jsonb)'
+    ActiveRecord::Base.connection.execute("
+      UPDATE activities SET values = REGEXP_REPLACE(values::text, '^\"||\"$||\\\\', '', 'g')::jsonb
+    ")
+  end
+end
diff --git a/db/schema.rb b/db/schema.rb
new file mode 100644
index 000000000..596956419
--- /dev/null
+++ b/db/schema.rb
@@ -0,0 +1,1108 @@
+# This file is auto-generated from the current state of the database. Instead
+# of editing this file, please use the migrations feature of Active Record to
+# incrementally modify your database, and then regenerate this schema definition.
+#
+# Note that this schema.rb definition is the authoritative source for your
+# database schema. If you need to create the application database on another
+# system, you should be using db:schema:load, not running all the migrations
+# from scratch. The latter is a flawed and unsustainable approach (the more migrations
+# you'll amass, the slower it'll run and the greater likelihood for issues).
+#
+# It's strongly recommended that you check this file into your version control system.
+
+ActiveRecord::Schema.define(version: 2019_09_03_145834) do
+
+  # These are extensions that must be enabled in order to support this database
+  enable_extension "btree_gist"
+  enable_extension "pg_trgm"
+  enable_extension "plpgsql"
+
+  create_table "activities", force: :cascade do |t|
+    t.bigint "my_module_id"
+    t.bigint "owner_id"
+    t.integer "type_of", null: false
+    t.string "message"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "project_id"
+    t.bigint "experiment_id"
+    t.string "subject_type"
+    t.bigint "subject_id"
+    t.bigint "team_id"
+    t.integer "group_type"
+    t.jsonb "values"
+    t.index ["created_at"], name: "index_activities_on_created_at"
+    t.index ["experiment_id"], name: "index_activities_on_experiment_id"
+    t.index ["my_module_id"], name: "index_activities_on_my_module_id"
+    t.index ["owner_id"], name: "index_activities_on_owner_id"
+    t.index ["project_id"], name: "index_activities_on_project_id"
+    t.index ["subject_type", "subject_id"], name: "index_activities_on_subject_type_and_subject_id"
+    t.index ["team_id"], name: "index_activities_on_team_id"
+    t.index ["type_of"], name: "index_activities_on_type_of"
+  end
+
+  create_table "asset_text_data", force: :cascade do |t|
+    t.text "data", null: false
+    t.bigint "asset_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.tsvector "data_vector"
+    t.index ["asset_id"], name: "index_asset_text_data_on_asset_id", unique: true
+    t.index ["data_vector"], name: "index_asset_text_data_on_data_vector", using: :gin
+  end
+
+  create_table "assets", force: :cascade do |t|
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.string "file_file_name"
+    t.string "file_content_type"
+    t.bigint "file_file_size"
+    t.datetime "file_updated_at"
+    t.bigint "created_by_id"
+    t.bigint "last_modified_by_id"
+    t.integer "estimated_size", default: 0, null: false
+    t.boolean "file_present", default: false, null: false
+    t.string "lock", limit: 1024
+    t.integer "lock_ttl"
+    t.integer "version", default: 1
+    t.boolean "file_processing"
+    t.integer "team_id"
+    t.integer "file_image_quality"
+    t.index "trim_html_tags((file_file_name)::text) gin_trgm_ops", name: "index_assets_on_file_file_name", using: :gin
+    t.index ["created_at"], name: "index_assets_on_created_at"
+    t.index ["created_by_id"], name: "index_assets_on_created_by_id"
+    t.index ["last_modified_by_id"], name: "index_assets_on_last_modified_by_id"
+    t.index ["team_id"], name: "index_assets_on_team_id"
+  end
+
+  create_table "checklist_items", force: :cascade do |t|
+    t.string "text", null: false
+    t.boolean "checked", default: false, null: false
+    t.bigint "checklist_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "created_by_id"
+    t.bigint "last_modified_by_id"
+    t.integer "position"
+    t.index "trim_html_tags((text)::text) gin_trgm_ops", name: "index_checklist_items_on_text", using: :gin
+    t.index ["checklist_id"], name: "index_checklist_items_on_checklist_id"
+    t.index ["created_by_id"], name: "index_checklist_items_on_created_by_id"
+    t.index ["last_modified_by_id"], name: "index_checklist_items_on_last_modified_by_id"
+  end
+
+  create_table "checklists", force: :cascade do |t|
+    t.string "name", null: false
+    t.bigint "step_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "created_by_id"
+    t.bigint "last_modified_by_id"
+    t.index "trim_html_tags((name)::text) gin_trgm_ops", name: "index_checklists_on_name", using: :gin
+    t.index ["created_by_id"], name: "index_checklists_on_created_by_id"
+    t.index ["last_modified_by_id"], name: "index_checklists_on_last_modified_by_id"
+    t.index ["step_id"], name: "index_checklists_on_step_id"
+  end
+
+  create_table "comments", force: :cascade do |t|
+    t.string "message", null: false
+    t.bigint "user_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "last_modified_by_id"
+    t.string "type"
+    t.integer "associated_id"
+    t.index "trim_html_tags((message)::text) gin_trgm_ops", name: "index_comments_on_message", using: :gin
+    t.index ["associated_id"], name: "index_comments_on_associated_id"
+    t.index ["created_at"], name: "index_comments_on_created_at"
+    t.index ["last_modified_by_id"], name: "index_comments_on_last_modified_by_id"
+    t.index ["type"], name: "index_comments_on_type"
+    t.index ["user_id"], name: "index_comments_on_user_id"
+  end
+
+  create_table "connections", force: :cascade do |t|
+    t.bigint "input_id", null: false
+    t.bigint "output_id", null: false
+    t.index ["input_id"], name: "index_connections_on_input_id"
+    t.index ["output_id"], name: "index_connections_on_output_id"
+  end
+
+  create_table "custom_fields", force: :cascade do |t|
+    t.string "name", null: false
+    t.bigint "user_id", null: false
+    t.bigint "team_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "last_modified_by_id"
+    t.index ["last_modified_by_id"], name: "index_custom_fields_on_last_modified_by_id"
+    t.index ["team_id"], name: "index_custom_fields_on_team_id"
+    t.index ["user_id"], name: "index_custom_fields_on_user_id"
+  end
+
+  create_table "delayed_jobs", force: :cascade do |t|
+    t.integer "priority", default: 0, null: false
+    t.integer "attempts", default: 0, null: false
+    t.text "handler", null: false
+    t.text "last_error"
+    t.datetime "run_at"
+    t.datetime "locked_at"
+    t.datetime "failed_at"
+    t.string "locked_by"
+    t.string "queue"
+    t.datetime "created_at"
+    t.datetime "updated_at"
+    t.index ["priority", "run_at"], name: "delayed_jobs_priority"
+    t.index ["queue"], name: "delayed_jobs_queue"
+  end
+
+  create_table "experiments", force: :cascade do |t|
+    t.string "name", null: false
+    t.text "description"
+    t.integer "project_id", null: false
+    t.bigint "created_by_id", null: false
+    t.bigint "last_modified_by_id", null: false
+    t.boolean "archived", default: false, null: false
+    t.bigint "archived_by_id"
+    t.datetime "archived_on"
+    t.bigint "restored_by_id"
+    t.datetime "restored_on"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.string "workflowimg_file_name"
+    t.string "workflowimg_content_type"
+    t.bigint "workflowimg_file_size"
+    t.datetime "workflowimg_updated_at"
+    t.uuid "uuid"
+    t.index ["archived_by_id"], name: "index_experiments_on_archived_by_id"
+    t.index ["created_by_id"], name: "index_experiments_on_created_by_id"
+    t.index ["last_modified_by_id"], name: "index_experiments_on_last_modified_by_id"
+    t.index ["name"], name: "index_experiments_on_name"
+    t.index ["project_id"], name: "index_experiments_on_project_id"
+    t.index ["restored_by_id"], name: "index_experiments_on_restored_by_id"
+  end
+
+  create_table "my_module_groups", force: :cascade do |t|
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "created_by_id"
+    t.bigint "experiment_id", default: 0, null: false
+    t.index ["created_by_id"], name: "index_my_module_groups_on_created_by_id"
+    t.index ["experiment_id"], name: "index_my_module_groups_on_experiment_id"
+  end
+
+  create_table "my_module_repository_rows", force: :cascade do |t|
+    t.bigint "repository_row_id", null: false
+    t.integer "my_module_id"
+    t.bigint "assigned_by_id", null: false
+    t.datetime "created_at"
+    t.datetime "updated_at"
+    t.index ["my_module_id", "repository_row_id"], name: "index_my_module_ids_repository_row_ids"
+    t.index ["repository_row_id"], name: "index_my_module_repository_rows_on_repository_row_id"
+  end
+
+  create_table "my_module_tags", force: :cascade do |t|
+    t.integer "my_module_id"
+    t.integer "tag_id"
+    t.bigint "created_by_id"
+    t.index ["created_by_id"], name: "index_my_module_tags_on_created_by_id"
+    t.index ["my_module_id"], name: "index_my_module_tags_on_my_module_id"
+    t.index ["tag_id"], name: "index_my_module_tags_on_tag_id"
+  end
+
+  create_table "my_modules", force: :cascade do |t|
+    t.string "name", null: false
+    t.datetime "due_date"
+    t.string "description"
+    t.integer "x", default: 0, null: false
+    t.integer "y", default: 0, null: false
+    t.bigint "my_module_group_id"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.boolean "archived", default: false, null: false
+    t.datetime "archived_on"
+    t.bigint "created_by_id"
+    t.bigint "last_modified_by_id"
+    t.bigint "archived_by_id"
+    t.bigint "restored_by_id"
+    t.datetime "restored_on"
+    t.integer "nr_of_assigned_samples", default: 0
+    t.integer "workflow_order", default: -1, null: false
+    t.bigint "experiment_id", default: 0, null: false
+    t.integer "state", limit: 2, default: 0
+    t.datetime "completed_on"
+    t.index "trim_html_tags((description)::text) gin_trgm_ops", name: "index_my_modules_on_description", using: :gin
+    t.index "trim_html_tags((name)::text) gin_trgm_ops", name: "index_my_modules_on_name", using: :gin
+    t.index ["archived_by_id"], name: "index_my_modules_on_archived_by_id"
+    t.index ["created_by_id"], name: "index_my_modules_on_created_by_id"
+    t.index ["experiment_id"], name: "index_my_modules_on_experiment_id"
+    t.index ["last_modified_by_id"], name: "index_my_modules_on_last_modified_by_id"
+    t.index ["my_module_group_id"], name: "index_my_modules_on_my_module_group_id"
+    t.index ["restored_by_id"], name: "index_my_modules_on_restored_by_id"
+  end
+
+  create_table "notifications", force: :cascade do |t|
+    t.string "title"
+    t.string "message"
+    t.integer "type_of", null: false
+    t.bigint "generator_user_id"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.index ["created_at"], name: "index_notifications_on_created_at"
+  end
+
+  create_table "oauth_access_grants", force: :cascade do |t|
+    t.bigint "resource_owner_id", null: false
+    t.bigint "application_id", null: false
+    t.string "token", null: false
+    t.integer "expires_in", null: false
+    t.text "redirect_uri", null: false
+    t.datetime "created_at", null: false
+    t.datetime "revoked_at"
+    t.string "scopes"
+    t.index ["application_id"], name: "index_oauth_access_grants_on_application_id"
+    t.index ["token"], name: "index_oauth_access_grants_on_token", unique: true
+  end
+
+  create_table "oauth_access_tokens", force: :cascade do |t|
+    t.bigint "resource_owner_id"
+    t.bigint "application_id"
+    t.text "token", null: false
+    t.string "refresh_token"
+    t.integer "expires_in"
+    t.datetime "revoked_at"
+    t.datetime "created_at", null: false
+    t.string "scopes"
+    t.string "previous_refresh_token", default: "", null: false
+    t.index ["application_id"], name: "index_oauth_access_tokens_on_application_id"
+    t.index ["refresh_token"], name: "index_oauth_access_tokens_on_refresh_token", unique: true
+    t.index ["resource_owner_id"], name: "index_oauth_access_tokens_on_resource_owner_id"
+    t.index ["token"], name: "index_oauth_access_tokens_on_token", unique: true
+  end
+
+  create_table "oauth_applications", force: :cascade do |t|
+    t.string "name", null: false
+    t.string "uid", null: false
+    t.string "secret", null: false
+    t.text "redirect_uri", null: false
+    t.string "scopes", default: "", null: false
+    t.boolean "confidential", default: true, null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.index ["uid"], name: "index_oauth_applications_on_uid", unique: true
+  end
+
+  create_table "projects", force: :cascade do |t|
+    t.string "name", null: false
+    t.integer "visibility", default: 0, null: false
+    t.datetime "due_date"
+    t.bigint "team_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.boolean "archived", default: false, null: false
+    t.datetime "archived_on"
+    t.bigint "created_by_id"
+    t.bigint "last_modified_by_id"
+    t.bigint "archived_by_id"
+    t.bigint "restored_by_id"
+    t.datetime "restored_on"
+    t.string "experiments_order"
+    t.boolean "template"
+    t.boolean "demo", default: false, null: false
+    t.index "trim_html_tags((name)::text) gin_trgm_ops", name: "index_projects_on_name", using: :gin
+    t.index ["archived_by_id"], name: "index_projects_on_archived_by_id"
+    t.index ["created_by_id"], name: "index_projects_on_created_by_id"
+    t.index ["last_modified_by_id"], name: "index_projects_on_last_modified_by_id"
+    t.index ["restored_by_id"], name: "index_projects_on_restored_by_id"
+    t.index ["team_id"], name: "index_projects_on_team_id"
+  end
+
+  create_table "protocol_keywords", force: :cascade do |t|
+    t.string "name"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.integer "nr_of_protocols", default: 0
+    t.bigint "team_id", null: false
+    t.index "trim_html_tags((name)::text) gin_trgm_ops", name: "index_protocol_keywords_on_name", using: :gin
+    t.index ["team_id"], name: "index_protocol_keywords_on_team_id"
+  end
+
+  create_table "protocol_protocol_keywords", force: :cascade do |t|
+    t.bigint "protocol_id", null: false
+    t.bigint "protocol_keyword_id", null: false
+    t.index ["protocol_id"], name: "index_protocol_protocol_keywords_on_protocol_id"
+    t.index ["protocol_keyword_id"], name: "index_protocol_protocol_keywords_on_protocol_keyword_id"
+  end
+
+  create_table "protocols", force: :cascade do |t|
+    t.string "name"
+    t.text "authors"
+    t.text "description"
+    t.bigint "added_by_id"
+    t.bigint "my_module_id"
+    t.bigint "team_id", null: false
+    t.integer "protocol_type", default: 0, null: false
+    t.bigint "parent_id"
+    t.datetime "parent_updated_at"
+    t.bigint "archived_by_id"
+    t.datetime "archived_on"
+    t.bigint "restored_by_id"
+    t.datetime "restored_on"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.datetime "published_on"
+    t.integer "nr_of_linked_children", default: 0
+    t.index "trim_html_tags((name)::text) gin_trgm_ops", name: "index_protocols_on_name", using: :gin
+    t.index "trim_html_tags(authors) gin_trgm_ops", name: "index_protocols_on_authors", using: :gin
+    t.index "trim_html_tags(description) gin_trgm_ops", name: "index_protocols_on_description", using: :gin
+    t.index ["added_by_id"], name: "index_protocols_on_added_by_id"
+    t.index ["archived_by_id"], name: "index_protocols_on_archived_by_id"
+    t.index ["my_module_id"], name: "index_protocols_on_my_module_id"
+    t.index ["parent_id"], name: "index_protocols_on_parent_id"
+    t.index ["protocol_type"], name: "index_protocols_on_protocol_type"
+    t.index ["restored_by_id"], name: "index_protocols_on_restored_by_id"
+    t.index ["team_id"], name: "index_protocols_on_team_id"
+  end
+
+  create_table "report_elements", force: :cascade do |t|
+    t.integer "position", null: false
+    t.integer "type_of", null: false
+    t.integer "sort_order", default: 0
+    t.bigint "report_id"
+    t.integer "parent_id"
+    t.bigint "project_id"
+    t.bigint "my_module_id"
+    t.bigint "step_id"
+    t.bigint "result_id"
+    t.bigint "checklist_id"
+    t.bigint "asset_id"
+    t.bigint "table_id"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "experiment_id"
+    t.integer "repository_id"
+    t.index ["asset_id"], name: "index_report_elements_on_asset_id"
+    t.index ["checklist_id"], name: "index_report_elements_on_checklist_id"
+    t.index ["experiment_id"], name: "index_report_elements_on_experiment_id"
+    t.index ["my_module_id"], name: "index_report_elements_on_my_module_id"
+    t.index ["parent_id"], name: "index_report_elements_on_parent_id"
+    t.index ["project_id"], name: "index_report_elements_on_project_id"
+    t.index ["report_id"], name: "index_report_elements_on_report_id"
+    t.index ["repository_id"], name: "index_report_elements_on_repository_id"
+    t.index ["result_id"], name: "index_report_elements_on_result_id"
+    t.index ["step_id"], name: "index_report_elements_on_step_id"
+    t.index ["table_id"], name: "index_report_elements_on_table_id"
+  end
+
+  create_table "reports", force: :cascade do |t|
+    t.string "name", null: false
+    t.string "description"
+    t.bigint "project_id", null: false
+    t.bigint "user_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "last_modified_by_id"
+    t.bigint "team_id"
+    t.index "trim_html_tags((description)::text) gin_trgm_ops", name: "index_reports_on_description", using: :gin
+    t.index "trim_html_tags((name)::text) gin_trgm_ops", name: "index_reports_on_name", using: :gin
+    t.index ["last_modified_by_id"], name: "index_reports_on_last_modified_by_id"
+    t.index ["project_id"], name: "index_reports_on_project_id"
+    t.index ["team_id"], name: "index_reports_on_team_id"
+    t.index ["user_id"], name: "index_reports_on_user_id"
+  end
+
+  create_table "repositories", force: :cascade do |t|
+    t.integer "team_id"
+    t.bigint "created_by_id", null: false
+    t.string "name"
+    t.datetime "created_at"
+    t.datetime "updated_at"
+    t.datetime "discarded_at"
+    t.boolean "shared", default: false, null: false
+    t.integer "permission_level", default: 0, null: false
+    t.index ["discarded_at"], name: "index_repositories_on_discarded_at"
+    t.index ["permission_level"], name: "index_repositories_on_permission_level"
+    t.index ["shared"], name: "index_repositories_on_shared"
+    t.index ["team_id"], name: "index_repositories_on_team_id"
+  end
+
+  create_table "repository_asset_values", force: :cascade do |t|
+    t.bigint "asset_id"
+    t.bigint "created_by_id"
+    t.bigint "last_modified_by_id"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.index ["asset_id"], name: "index_repository_asset_values_on_asset_id"
+    t.index ["created_by_id"], name: "index_repository_asset_values_on_created_by_id"
+    t.index ["last_modified_by_id"], name: "index_repository_asset_values_on_last_modified_by_id"
+  end
+
+  create_table "repository_cells", force: :cascade do |t|
+    t.bigint "repository_row_id"
+    t.integer "repository_column_id"
+    t.string "value_type"
+    t.bigint "value_id"
+    t.datetime "created_at"
+    t.datetime "updated_at"
+    t.index ["repository_column_id"], name: "index_repository_cells_on_repository_column_id"
+    t.index ["repository_row_id"], name: "index_repository_cells_on_repository_row_id"
+    t.index ["value_type", "value_id"], name: "index_repository_cells_on_value_type_and_value_id"
+  end
+
+  create_table "repository_columns", force: :cascade do |t|
+    t.integer "repository_id"
+    t.bigint "created_by_id", null: false
+    t.string "name"
+    t.integer "data_type", null: false
+    t.datetime "created_at"
+    t.datetime "updated_at"
+    t.index ["repository_id"], name: "index_repository_columns_on_repository_id"
+  end
+
+  create_table "repository_date_values", force: :cascade do |t|
+    t.datetime "data"
+    t.datetime "created_at"
+    t.datetime "updated_at"
+    t.bigint "created_by_id", null: false
+    t.bigint "last_modified_by_id", null: false
+  end
+
+  create_table "repository_list_items", force: :cascade do |t|
+    t.bigint "repository_id"
+    t.bigint "repository_column_id"
+    t.text "data", null: false
+    t.bigint "created_by_id"
+    t.bigint "last_modified_by_id"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.index "trim_html_tags(data) gin_trgm_ops", name: "index_repository_list_items_on_data", using: :gin
+    t.index ["created_by_id"], name: "index_repository_list_items_on_created_by_id"
+    t.index ["last_modified_by_id"], name: "index_repository_list_items_on_last_modified_by_id"
+    t.index ["repository_column_id"], name: "index_repository_list_items_on_repository_column_id"
+    t.index ["repository_id"], name: "index_repository_list_items_on_repository_id"
+  end
+
+  create_table "repository_list_values", force: :cascade do |t|
+    t.bigint "repository_list_item_id"
+    t.bigint "created_by_id"
+    t.bigint "last_modified_by_id"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.index ["created_by_id"], name: "index_repository_list_values_on_created_by_id"
+    t.index ["last_modified_by_id"], name: "index_repository_list_values_on_last_modified_by_id"
+    t.index ["repository_list_item_id"], name: "index_repository_list_values_on_repository_list_item_id"
+  end
+
+  create_table "repository_rows", force: :cascade do |t|
+    t.integer "repository_id"
+    t.bigint "created_by_id", null: false
+    t.bigint "last_modified_by_id", null: false
+    t.string "name"
+    t.datetime "created_at"
+    t.datetime "updated_at"
+    t.index "trim_html_tags((name)::text) gin_trgm_ops", name: "index_repository_rows_on_name", using: :gin
+    t.index ["repository_id"], name: "index_repository_rows_on_repository_id"
+  end
+
+  create_table "repository_table_states", force: :cascade do |t|
+    t.jsonb "state", null: false
+    t.integer "user_id", null: false
+    t.integer "repository_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.index ["repository_id"], name: "index_repository_table_states_on_repository_id"
+    t.index ["user_id"], name: "index_repository_table_states_on_user_id"
+  end
+
+  create_table "repository_text_values", force: :cascade do |t|
+    t.string "data"
+    t.datetime "created_at"
+    t.datetime "updated_at"
+    t.bigint "created_by_id", null: false
+    t.bigint "last_modified_by_id", null: false
+    t.index "trim_html_tags((data)::text) gin_trgm_ops", name: "index_repository_text_values_on_data", using: :gin
+  end
+
+  create_table "result_assets", force: :cascade do |t|
+    t.bigint "result_id", null: false
+    t.bigint "asset_id", null: false
+    t.index ["result_id", "asset_id"], name: "index_result_assets_on_result_id_and_asset_id"
+  end
+
+  create_table "result_tables", force: :cascade do |t|
+    t.bigint "result_id", null: false
+    t.bigint "table_id", null: false
+    t.index ["result_id", "table_id"], name: "index_result_tables_on_result_id_and_table_id"
+  end
+
+  create_table "result_texts", force: :cascade do |t|
+    t.string "text", null: false
+    t.bigint "result_id", null: false
+    t.index "trim_html_tags((text)::text) gin_trgm_ops", name: "index_result_texts_on_text", using: :gin
+    t.index ["result_id"], name: "index_result_texts_on_result_id"
+  end
+
+  create_table "results", force: :cascade do |t|
+    t.string "name"
+    t.bigint "my_module_id", null: false
+    t.bigint "user_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.boolean "archived", default: false, null: false
+    t.datetime "archived_on"
+    t.bigint "last_modified_by_id"
+    t.bigint "archived_by_id"
+    t.bigint "restored_by_id"
+    t.datetime "restored_on"
+    t.index "trim_html_tags((name)::text) gin_trgm_ops", name: "index_results_on_name", using: :gin
+    t.index ["archived_by_id"], name: "index_results_on_archived_by_id"
+    t.index ["created_at"], name: "index_results_on_created_at"
+    t.index ["last_modified_by_id"], name: "index_results_on_last_modified_by_id"
+    t.index ["my_module_id"], name: "index_results_on_my_module_id"
+    t.index ["restored_by_id"], name: "index_results_on_restored_by_id"
+    t.index ["user_id"], name: "index_results_on_user_id"
+  end
+
+  create_table "sample_custom_fields", force: :cascade do |t|
+    t.string "value", null: false
+    t.bigint "custom_field_id", null: false
+    t.bigint "sample_id"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.index "trim_html_tags((value)::text) gin_trgm_ops", name: "index_sample_custom_fields_on_value", using: :gin
+    t.index ["custom_field_id"], name: "index_sample_custom_fields_on_custom_field_id"
+    t.index ["sample_id"], name: "index_sample_custom_fields_on_sample_id"
+  end
+
+  create_table "sample_groups", force: :cascade do |t|
+    t.string "name", null: false
+    t.string "color", default: "#ff0000", null: false
+    t.bigint "team_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "created_by_id"
+    t.bigint "last_modified_by_id"
+    t.index "trim_html_tags((name)::text) gin_trgm_ops", name: "index_sample_groups_on_name", using: :gin
+    t.index ["created_by_id"], name: "index_sample_groups_on_created_by_id"
+    t.index ["last_modified_by_id"], name: "index_sample_groups_on_last_modified_by_id"
+    t.index ["team_id"], name: "index_sample_groups_on_team_id"
+  end
+
+  create_table "sample_my_modules", force: :cascade do |t|
+    t.bigint "sample_id", null: false
+    t.bigint "my_module_id", null: false
+    t.bigint "assigned_by_id"
+    t.datetime "assigned_on"
+    t.index ["assigned_by_id"], name: "index_sample_my_modules_on_assigned_by_id"
+    t.index ["my_module_id"], name: "index_sample_my_modules_on_my_module_id"
+    t.index ["sample_id", "my_module_id"], name: "index_sample_my_modules_on_sample_id_and_my_module_id"
+  end
+
+  create_table "sample_types", force: :cascade do |t|
+    t.string "name", null: false
+    t.bigint "team_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "created_by_id"
+    t.bigint "last_modified_by_id"
+    t.index "trim_html_tags((name)::text) gin_trgm_ops", name: "index_sample_types_on_name", using: :gin
+    t.index ["created_by_id"], name: "index_sample_types_on_created_by_id"
+    t.index ["last_modified_by_id"], name: "index_sample_types_on_last_modified_by_id"
+    t.index ["team_id"], name: "index_sample_types_on_team_id"
+  end
+
+  create_table "samples", force: :cascade do |t|
+    t.string "name", null: false
+    t.bigint "user_id", null: false
+    t.bigint "team_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "sample_group_id"
+    t.bigint "sample_type_id"
+    t.bigint "last_modified_by_id"
+    t.integer "nr_of_modules_assigned_to", default: 0
+    t.index "trim_html_tags((name)::text) gin_trgm_ops", name: "index_samples_on_name", using: :gin
+    t.index ["last_modified_by_id"], name: "index_samples_on_last_modified_by_id"
+    t.index ["sample_group_id"], name: "index_samples_on_sample_group_id"
+    t.index ["sample_type_id"], name: "index_samples_on_sample_type_id"
+    t.index ["team_id"], name: "index_samples_on_team_id"
+    t.index ["user_id"], name: "index_samples_on_user_id"
+  end
+
+  create_table "samples_tables", force: :cascade do |t|
+    t.jsonb "status", default: {"time"=>0, "order"=>[[2, "desc"]], "start"=>0, "length"=>10, "search"=>{"regex"=>false, "smart"=>true, "search"=>"", "caseInsensitive"=>true}, "columns"=>[{"search"=>{"regex"=>false, "smart"=>true, "search"=>"", "caseInsensitive"=>true}, "visible"=>true}, {"search"=>{"regex"=>false, "smart"=>true, "search"=>"", "caseInsensitive"=>true}, "visible"=>true}, {"search"=>{"regex"=>false, "smart"=>true, "search"=>"", "caseInsensitive"=>true}, "visible"=>true}, {"search"=>{"regex"=>false, "smart"=>true, "search"=>"", "caseInsensitive"=>true}, "visible"=>true}, {"search"=>{"regex"=>false, "smart"=>true, "search"=>"", "caseInsensitive"=>true}, "visible"=>true}, {"search"=>{"regex"=>false, "smart"=>true, "search"=>"", "caseInsensitive"=>true}, "visible"=>true}, {"search"=>{"regex"=>false, "smart"=>true, "search"=>"", "caseInsensitive"=>true}, "visible"=>true}], "assigned"=>"all", "ColReorder"=>[0, 1, 2, 3, 4, 5, 6]}, null: false
+    t.integer "user_id", null: false
+    t.integer "team_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.index ["team_id"], name: "index_samples_tables_on_team_id"
+    t.index ["user_id"], name: "index_samples_tables_on_user_id"
+  end
+
+  create_table "settings", force: :cascade do |t|
+    t.text "type", null: false
+    t.jsonb "values", default: {}, null: false
+    t.index ["type"], name: "index_settings_on_type", unique: true
+  end
+
+  create_table "step_assets", force: :cascade do |t|
+    t.bigint "step_id", null: false
+    t.bigint "asset_id", null: false
+    t.index ["step_id", "asset_id"], name: "index_step_assets_on_step_id_and_asset_id"
+  end
+
+  create_table "step_tables", force: :cascade do |t|
+    t.bigint "step_id", null: false
+    t.bigint "table_id", null: false
+    t.index ["step_id", "table_id"], name: "index_step_tables_on_step_id_and_table_id", unique: true
+  end
+
+  create_table "steps", force: :cascade do |t|
+    t.string "name"
+    t.string "description"
+    t.integer "position", null: false
+    t.boolean "completed", null: false
+    t.datetime "completed_on"
+    t.bigint "user_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "last_modified_by_id"
+    t.bigint "protocol_id", null: false
+    t.index "trim_html_tags((description)::text) gin_trgm_ops", name: "index_steps_on_description", using: :gin
+    t.index "trim_html_tags((name)::text) gin_trgm_ops", name: "index_steps_on_name", using: :gin
+    t.index ["created_at"], name: "index_steps_on_created_at"
+    t.index ["last_modified_by_id"], name: "index_steps_on_last_modified_by_id"
+    t.index ["position"], name: "index_steps_on_position"
+    t.index ["protocol_id"], name: "index_steps_on_protocol_id"
+    t.index ["user_id"], name: "index_steps_on_user_id"
+  end
+
+  create_table "system_notifications", force: :cascade do |t|
+    t.string "title"
+    t.text "description"
+    t.string "modal_title"
+    t.text "modal_body"
+    t.boolean "show_on_login", default: false
+    t.datetime "source_created_at"
+    t.bigint "source_id"
+    t.datetime "last_time_changed_at", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.index ["last_time_changed_at"], name: "index_system_notifications_on_last_time_changed_at"
+    t.index ["source_created_at"], name: "index_system_notifications_on_source_created_at"
+    t.index ["source_id"], name: "index_system_notifications_on_source_id", unique: true
+  end
+
+  create_table "tables", force: :cascade do |t|
+    t.binary "contents", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "created_by_id"
+    t.bigint "last_modified_by_id"
+    t.tsvector "data_vector"
+    t.string "name", default: ""
+    t.integer "team_id"
+    t.index "trim_html_tags((name)::text) gin_trgm_ops", name: "index_tables_on_name", using: :gin
+    t.index ["created_at"], name: "index_tables_on_created_at"
+    t.index ["created_by_id"], name: "index_tables_on_created_by_id"
+    t.index ["data_vector"], name: "index_tables_on_data_vector", using: :gin
+    t.index ["last_modified_by_id"], name: "index_tables_on_last_modified_by_id"
+    t.index ["team_id"], name: "index_tables_on_team_id"
+  end
+
+  create_table "tags", force: :cascade do |t|
+    t.string "name", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.string "color", default: "#ff0000", null: false
+    t.bigint "project_id", null: false
+    t.bigint "created_by_id"
+    t.bigint "last_modified_by_id"
+    t.index "trim_html_tags((name)::text) gin_trgm_ops", name: "index_tags_on_name", using: :gin
+    t.index ["created_by_id"], name: "index_tags_on_created_by_id"
+    t.index ["last_modified_by_id"], name: "index_tags_on_last_modified_by_id"
+    t.index ["project_id"], name: "index_tags_on_project_id"
+  end
+
+  create_table "team_repositories", force: :cascade do |t|
+    t.bigint "team_id"
+    t.bigint "repository_id"
+    t.integer "permission_level", default: 0, null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.index ["permission_level"], name: "index_team_repositories_on_permission_level"
+    t.index ["repository_id"], name: "index_team_repositories_on_repository_id"
+    t.index ["team_id", "repository_id"], name: "index_team_repositories_on_team_id_and_repository_id", unique: true
+    t.index ["team_id"], name: "index_team_repositories_on_team_id"
+  end
+
+  create_table "teams", force: :cascade do |t|
+    t.string "name", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "created_by_id"
+    t.bigint "last_modified_by_id"
+    t.string "description"
+    t.bigint "space_taken", default: 1048576, null: false
+    t.index ["created_by_id"], name: "index_teams_on_created_by_id"
+    t.index ["last_modified_by_id"], name: "index_teams_on_last_modified_by_id"
+    t.index ["name"], name: "index_teams_on_name"
+  end
+
+  create_table "temp_files", force: :cascade do |t|
+    t.string "session_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.string "file_file_name"
+    t.string "file_content_type"
+    t.bigint "file_file_size"
+    t.datetime "file_updated_at"
+  end
+
+  create_table "tiny_mce_assets", force: :cascade do |t|
+    t.string "image_file_name"
+    t.string "image_content_type"
+    t.bigint "image_file_size"
+    t.datetime "image_updated_at"
+    t.integer "estimated_size", default: 0, null: false
+    t.integer "step_id"
+    t.integer "team_id"
+    t.integer "result_text_id"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.boolean "saved", default: true
+    t.string "object_type"
+    t.bigint "object_id"
+    t.index ["object_type", "object_id"], name: "index_tiny_mce_assets_on_object_type_and_object_id"
+    t.index ["result_text_id"], name: "index_tiny_mce_assets_on_result_text_id"
+    t.index ["step_id"], name: "index_tiny_mce_assets_on_step_id"
+    t.index ["team_id"], name: "index_tiny_mce_assets_on_team_id"
+  end
+
+  create_table "tokens", force: :cascade do |t|
+    t.string "token", null: false
+    t.integer "ttl", null: false
+    t.bigint "user_id", null: false
+  end
+
+  create_table "user_identities", force: :cascade do |t|
+    t.integer "user_id"
+    t.string "provider", null: false
+    t.string "uid", null: false
+    t.datetime "created_at"
+    t.datetime "updated_at"
+    t.index ["provider", "uid"], name: "index_user_identities_on_provider_and_uid", unique: true
+    t.index ["user_id", "provider"], name: "index_user_identities_on_user_id_and_provider", unique: true
+    t.index ["user_id"], name: "index_user_identities_on_user_id"
+  end
+
+  create_table "user_my_modules", force: :cascade do |t|
+    t.bigint "user_id", null: false
+    t.bigint "my_module_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "assigned_by_id"
+    t.index ["assigned_by_id"], name: "index_user_my_modules_on_assigned_by_id"
+    t.index ["my_module_id"], name: "index_user_my_modules_on_my_module_id"
+    t.index ["user_id"], name: "index_user_my_modules_on_user_id"
+  end
+
+  create_table "user_notifications", force: :cascade do |t|
+    t.bigint "user_id"
+    t.bigint "notification_id"
+    t.boolean "checked", default: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.index ["checked"], name: "index_user_notifications_on_checked"
+    t.index ["notification_id"], name: "index_user_notifications_on_notification_id"
+    t.index ["user_id"], name: "index_user_notifications_on_user_id"
+  end
+
+  create_table "user_projects", force: :cascade do |t|
+    t.integer "role"
+    t.bigint "user_id", null: false
+    t.bigint "project_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "assigned_by_id"
+    t.index ["assigned_by_id"], name: "index_user_projects_on_assigned_by_id"
+    t.index ["project_id"], name: "index_user_projects_on_project_id"
+    t.index ["user_id", "project_id"], name: "index_user_projects_on_user_id_and_project_id", unique: true
+    t.index ["user_id"], name: "index_user_projects_on_user_id"
+  end
+
+  create_table "user_system_notifications", force: :cascade do |t|
+    t.bigint "user_id"
+    t.bigint "system_notification_id"
+    t.datetime "seen_at"
+    t.datetime "read_at"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.index ["read_at"], name: "index_user_system_notifications_on_read_at"
+    t.index ["seen_at"], name: "index_user_system_notifications_on_seen_at"
+    t.index ["system_notification_id"], name: "index_user_system_notifications_on_system_notification_id"
+    t.index ["user_id", "system_notification_id"], name: "index_user_system_notifications_on_user_and_notification_id", unique: true
+    t.index ["user_id"], name: "index_user_system_notifications_on_user_id"
+  end
+
+  create_table "user_teams", force: :cascade do |t|
+    t.integer "role", default: 1, null: false
+    t.bigint "user_id", null: false
+    t.bigint "team_id", null: false
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.bigint "assigned_by_id"
+    t.index ["assigned_by_id"], name: "index_user_teams_on_assigned_by_id"
+    t.index ["team_id"], name: "index_user_teams_on_team_id"
+    t.index ["user_id", "team_id"], name: "index_user_teams_on_user_id_and_team_id", unique: true
+    t.index ["user_id"], name: "index_user_teams_on_user_id"
+  end
+
+  create_table "users", force: :cascade do |t|
+    t.string "full_name", null: false
+    t.string "initials", null: false
+    t.string "email", default: "", null: false
+    t.string "encrypted_password", default: "", null: false
+    t.string "reset_password_token"
+    t.datetime "reset_password_sent_at"
+    t.datetime "remember_created_at"
+    t.integer "sign_in_count", default: 0, null: false
+    t.datetime "current_sign_in_at"
+    t.datetime "last_sign_in_at"
+    t.string "current_sign_in_ip"
+    t.string "last_sign_in_ip"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.string "avatar_file_name"
+    t.string "avatar_content_type"
+    t.bigint "avatar_file_size"
+    t.datetime "avatar_updated_at"
+    t.string "confirmation_token"
+    t.datetime "confirmed_at"
+    t.datetime "confirmation_sent_at"
+    t.string "unconfirmed_email"
+    t.string "invitation_token"
+    t.datetime "invitation_created_at"
+    t.datetime "invitation_sent_at"
+    t.datetime "invitation_accepted_at"
+    t.integer "invitation_limit"
+    t.string "invited_by_type"
+    t.integer "invited_by_id"
+    t.integer "invitations_count", default: 0
+    t.bigint "current_team_id"
+    t.string "authentication_token", limit: 30
+    t.jsonb "settings", default: {}, null: false
+    t.jsonb "variables", default: {}, null: false
+    t.index "trim_html_tags((full_name)::text) gin_trgm_ops", name: "index_users_on_full_name", using: :gin
+    t.index ["authentication_token"], name: "index_users_on_authentication_token", unique: true
+    t.index ["confirmation_token"], name: "index_users_on_confirmation_token", unique: true
+    t.index ["email"], name: "index_users_on_email", unique: true
+    t.index ["invitation_token"], name: "index_users_on_invitation_token", unique: true
+    t.index ["invitations_count"], name: "index_users_on_invitations_count"
+    t.index ["invited_by_id"], name: "index_users_on_invited_by_id"
+    t.index ["reset_password_token"], name: "index_users_on_reset_password_token", unique: true
+  end
+
+  create_table "view_states", force: :cascade do |t|
+    t.jsonb "state"
+    t.bigint "user_id"
+    t.string "viewable_type"
+    t.bigint "viewable_id"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.index ["user_id"], name: "index_view_states_on_user_id"
+    t.index ["viewable_type", "viewable_id"], name: "index_view_states_on_viewable_type_and_viewable_id"
+  end
+
+  create_table "wopi_actions", force: :cascade do |t|
+    t.string "action", null: false
+    t.string "extension", null: false
+    t.string "urlsrc", null: false
+    t.bigint "wopi_app_id", null: false
+    t.index ["extension", "action"], name: "index_wopi_actions_on_extension_and_action"
+  end
+
+  create_table "wopi_apps", force: :cascade do |t|
+    t.string "name", null: false
+    t.string "icon", null: false
+    t.bigint "wopi_discovery_id", null: false
+  end
+
+  create_table "wopi_discoveries", force: :cascade do |t|
+    t.integer "expires", null: false
+    t.string "proof_key_mod", null: false
+    t.string "proof_key_exp", null: false
+    t.string "proof_key_old_mod", null: false
+    t.string "proof_key_old_exp", null: false
+  end
+
+  create_table "zip_exports", force: :cascade do |t|
+    t.bigint "user_id"
+    t.datetime "created_at", null: false
+    t.datetime "updated_at", null: false
+    t.string "zip_file_file_name"
+    t.string "zip_file_content_type"
+    t.bigint "zip_file_file_size"
+    t.datetime "zip_file_updated_at"
+    t.string "type"
+    t.index ["user_id"], name: "index_zip_exports_on_user_id"
+  end
+
+  add_foreign_key "activities", "experiments"
+  add_foreign_key "activities", "my_modules"
+  add_foreign_key "activities", "projects"
+  add_foreign_key "activities", "users", column: "owner_id"
+  add_foreign_key "asset_text_data", "assets"
+  add_foreign_key "assets", "users", column: "created_by_id"
+  add_foreign_key "assets", "users", column: "last_modified_by_id"
+  add_foreign_key "checklist_items", "checklists"
+  add_foreign_key "checklist_items", "users", column: "created_by_id"
+  add_foreign_key "checklist_items", "users", column: "last_modified_by_id"
+  add_foreign_key "checklists", "steps"
+  add_foreign_key "checklists", "users", column: "created_by_id"
+  add_foreign_key "checklists", "users", column: "last_modified_by_id"
+  add_foreign_key "comments", "users"
+  add_foreign_key "comments", "users", column: "last_modified_by_id"
+  add_foreign_key "connections", "my_modules", column: "input_id"
+  add_foreign_key "connections", "my_modules", column: "output_id"
+  add_foreign_key "custom_fields", "teams"
+  add_foreign_key "custom_fields", "users"
+  add_foreign_key "custom_fields", "users", column: "last_modified_by_id"
+  add_foreign_key "experiments", "users", column: "archived_by_id"
+  add_foreign_key "experiments", "users", column: "created_by_id"
+  add_foreign_key "experiments", "users", column: "last_modified_by_id"
+  add_foreign_key "experiments", "users", column: "restored_by_id"
+  add_foreign_key "my_module_groups", "experiments"
+  add_foreign_key "my_module_groups", "users", column: "created_by_id"
+  add_foreign_key "my_module_repository_rows", "users", column: "assigned_by_id"
+  add_foreign_key "my_module_tags", "users", column: "created_by_id"
+  add_foreign_key "my_modules", "experiments"
+  add_foreign_key "my_modules", "my_module_groups"
+  add_foreign_key "my_modules", "users", column: "archived_by_id"
+  add_foreign_key "my_modules", "users", column: "created_by_id"
+  add_foreign_key "my_modules", "users", column: "last_modified_by_id"
+  add_foreign_key "my_modules", "users", column: "restored_by_id"
+  add_foreign_key "notifications", "users", column: "generator_user_id"
+  add_foreign_key "oauth_access_grants", "oauth_applications", column: "application_id"
+  add_foreign_key "oauth_access_grants", "users", column: "resource_owner_id"
+  add_foreign_key "oauth_access_tokens", "oauth_applications", column: "application_id"
+  add_foreign_key "oauth_access_tokens", "users", column: "resource_owner_id"
+  add_foreign_key "projects", "teams"
+  add_foreign_key "projects", "users", column: "archived_by_id"
+  add_foreign_key "projects", "users", column: "created_by_id"
+  add_foreign_key "projects", "users", column: "last_modified_by_id"
+  add_foreign_key "projects", "users", column: "restored_by_id"
+  add_foreign_key "protocol_keywords", "teams"
+  add_foreign_key "protocol_protocol_keywords", "protocol_keywords"
+  add_foreign_key "protocol_protocol_keywords", "protocols"
+  add_foreign_key "protocols", "my_modules"
+  add_foreign_key "protocols", "protocols", column: "parent_id"
+  add_foreign_key "protocols", "teams"
+  add_foreign_key "protocols", "users", column: "added_by_id"
+  add_foreign_key "protocols", "users", column: "archived_by_id"
+  add_foreign_key "protocols", "users", column: "restored_by_id"
+  add_foreign_key "report_elements", "assets"
+  add_foreign_key "report_elements", "checklists"
+  add_foreign_key "report_elements", "experiments"
+  add_foreign_key "report_elements", "my_modules"
+  add_foreign_key "report_elements", "projects"
+  add_foreign_key "report_elements", "reports"
+  add_foreign_key "report_elements", "results"
+  add_foreign_key "report_elements", "steps"
+  add_foreign_key "report_elements", "tables"
+  add_foreign_key "reports", "projects"
+  add_foreign_key "reports", "users"
+  add_foreign_key "reports", "users", column: "last_modified_by_id"
+  add_foreign_key "repositories", "users", column: "created_by_id"
+  add_foreign_key "repository_asset_values", "users", column: "created_by_id"
+  add_foreign_key "repository_asset_values", "users", column: "last_modified_by_id"
+  add_foreign_key "repository_columns", "users", column: "created_by_id"
+  add_foreign_key "repository_date_values", "users", column: "created_by_id"
+  add_foreign_key "repository_date_values", "users", column: "last_modified_by_id"
+  add_foreign_key "repository_list_items", "repositories"
+  add_foreign_key "repository_list_items", "repository_columns"
+  add_foreign_key "repository_list_items", "users", column: "created_by_id"
+  add_foreign_key "repository_list_items", "users", column: "last_modified_by_id"
+  add_foreign_key "repository_list_values", "users", column: "created_by_id"
+  add_foreign_key "repository_list_values", "users", column: "last_modified_by_id"
+  add_foreign_key "repository_rows", "users", column: "created_by_id"
+  add_foreign_key "repository_rows", "users", column: "last_modified_by_id"
+  add_foreign_key "repository_text_values", "users", column: "created_by_id"
+  add_foreign_key "repository_text_values", "users", column: "last_modified_by_id"
+  add_foreign_key "result_assets", "assets"
+  add_foreign_key "result_assets", "results"
+  add_foreign_key "result_tables", "results"
+  add_foreign_key "result_tables", "tables"
+  add_foreign_key "result_texts", "results"
+  add_foreign_key "results", "my_modules"
+  add_foreign_key "results", "users"
+  add_foreign_key "results", "users", column: "archived_by_id"
+  add_foreign_key "results", "users", column: "last_modified_by_id"
+  add_foreign_key "results", "users", column: "restored_by_id"
+  add_foreign_key "sample_custom_fields", "custom_fields"
+  add_foreign_key "sample_custom_fields", "samples"
+  add_foreign_key "sample_groups", "teams"
+  add_foreign_key "sample_groups", "users", column: "created_by_id"
+  add_foreign_key "sample_groups", "users", column: "last_modified_by_id"
+  add_foreign_key "sample_my_modules", "my_modules"
+  add_foreign_key "sample_my_modules", "samples"
+  add_foreign_key "sample_my_modules", "users", column: "assigned_by_id"
+  add_foreign_key "sample_types", "teams"
+  add_foreign_key "sample_types", "users", column: "created_by_id"
+  add_foreign_key "sample_types", "users", column: "last_modified_by_id"
+  add_foreign_key "samples", "sample_groups"
+  add_foreign_key "samples", "sample_types"
+  add_foreign_key "samples", "teams"
+  add_foreign_key "samples", "users"
+  add_foreign_key "samples", "users", column: "last_modified_by_id"
+  add_foreign_key "step_assets", "assets"
+  add_foreign_key "step_assets", "steps"
+  add_foreign_key "step_tables", "steps"
+  add_foreign_key "step_tables", "tables"
+  add_foreign_key "steps", "protocols"
+  add_foreign_key "steps", "users"
+  add_foreign_key "steps", "users", column: "last_modified_by_id"
+  add_foreign_key "tables", "users", column: "created_by_id"
+  add_foreign_key "tables", "users", column: "last_modified_by_id"
+  add_foreign_key "tags", "projects"
+  add_foreign_key "tags", "users", column: "created_by_id"
+  add_foreign_key "tags", "users", column: "last_modified_by_id"
+  add_foreign_key "team_repositories", "repositories"
+  add_foreign_key "team_repositories", "teams"
+  add_foreign_key "teams", "users", column: "created_by_id"
+  add_foreign_key "teams", "users", column: "last_modified_by_id"
+  add_foreign_key "tokens", "users"
+  add_foreign_key "user_my_modules", "my_modules"
+  add_foreign_key "user_my_modules", "users"
+  add_foreign_key "user_my_modules", "users", column: "assigned_by_id"
+  add_foreign_key "user_notifications", "notifications"
+  add_foreign_key "user_notifications", "users"
+  add_foreign_key "user_projects", "projects"
+  add_foreign_key "user_projects", "users"
+  add_foreign_key "user_projects", "users", column: "assigned_by_id"
+  add_foreign_key "user_system_notifications", "system_notifications"
+  add_foreign_key "user_system_notifications", "users"
+  add_foreign_key "user_teams", "teams"
+  add_foreign_key "user_teams", "users"
+  add_foreign_key "user_teams", "users", column: "assigned_by_id"
+  add_foreign_key "users", "teams", column: "current_team_id"
+  add_foreign_key "view_states", "users"
+  add_foreign_key "wopi_actions", "wopi_apps"
+  add_foreign_key "wopi_apps", "wopi_discoveries"
+  add_foreign_key "zip_exports", "users"
+
+  create_view "datatables_teams", sql_definition: <<-SQL
+      SELECT teams.id,
+      teams.name,
+      user_teams.role,
+      ( SELECT count(*) AS count
+             FROM user_teams user_teams_1
+            WHERE (user_teams_1.team_id = teams.id)) AS members,
+          CASE
+              WHEN (teams.created_by_id = user_teams.user_id) THEN false
+              ELSE true
+          END AS can_be_left,
+      user_teams.id AS user_team_id,
+      user_teams.user_id
+     FROM (teams
+       JOIN user_teams ON ((teams.id = user_teams.team_id)));
+  SQL
+end
diff --git a/spec/models/activity_spec.rb b/spec/models/activity_spec.rb
index 9a4c6370f..3faf57ed0 100644
--- a/spec/models/activity_spec.rb
+++ b/spec/models/activity_spec.rb
@@ -65,7 +65,7 @@ describe Activity, type: :model do
     it 'adds user to message items' do
       activity.save
 
-      expect(activity.message_items).to include(user: be_an(Hash))
+      expect(activity.message_items).to include('user' => be_an(Hash))
     end
   end
 
@@ -73,14 +73,14 @@ describe Activity, type: :model do
     context 'when do not have subject' do
       it 'does not add breadcrumbs to activity' do
         expect { old_activity.generate_breadcrumbs }
-          .not_to(change { activity.values[:breadcrumbs] })
+          .not_to(change { activity.values['breadcrumbs'] })
       end
     end
 
     context 'when have subject' do
       it 'adds breadcrumbs to activity' do
         expect { activity.generate_breadcrumbs }
-          .to(change { activity.values[:breadcrumbs] })
+          .to(change { activity.values['breadcrumbs'] })
       end
 
       context 'when subject is a my_module' do
diff --git a/spec/services/activities/create_activity_service_spec.rb b/spec/services/activities/create_activity_service_spec.rb
index fcd3e1f12..54e84ec50 100644
--- a/spec/services/activities/create_activity_service_spec.rb
+++ b/spec/services/activities/create_activity_service_spec.rb
@@ -71,7 +71,7 @@ describe Activities::CreateActivityService do
         a = service_call.activity
 
         expect(a.message_items[:project].keys)
-          .to contain_exactly('type', 'value', 'id', 'value_for')
+          .to contain_exactly(:type, :value, :id, :value_for)
       end
 
       it 'adds object project to message items as hash' do