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Improve generation of a demo project

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Closes SCI-3096
This commit is contained in:
Jure Grabnar 2019-02-26 08:06:07 +01:00
parent aa8a2b040a
commit b6dd783114
2 changed files with 58 additions and 28 deletions
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69
app/utilities/first_time_data_generator.rb
View file

@ -1,6 +1,6 @@
module FirstTimeDataGenerator module FirstTimeDataGenerator
# Create data for demo for new users # Create data for demo for new users
def seed_demo_data(user, team) def seed_demo_data(user, team, asset_queue = :demo)
@user = user @user = user
# If private private team does not exist, # If private private team does not exist,
@ -152,7 +152,7 @@ module FirstTimeDataGenerator
) )
end end
name = 'Demo project' name = '[NEW] Demo project by SciNote'
exp_name = 'qPCR Experiment Version 01' exp_name = 'qPCR Experiment Version 01'
# If there is an existing demo project, archive and rename it # If there is an existing demo project, archive and rename it
if team.projects.where(name: name).present? if team.projects.where(name: name).present?
@ -620,7 +620,7 @@ module FirstTimeDataGenerator
contents: tab_content['module2']['samples_table'] contents: tab_content['module2']['samples_table']
) )
# Add file to existig step # Add file to existig step
DelayedUploaderDemo.delay(queue: :demo).add_step_asset( DelayedUploaderDemo.delay(queue: asset_queue).add_step_asset(
step: my_modules[1].protocol.steps.where('position = 0').take, step: my_modules[1].protocol.steps.where('position = 0').take,
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -642,7 +642,7 @@ module FirstTimeDataGenerator
user_annotation + ' Please complete this by Monday.' user_annotation + ' Please complete this by Monday.'
) )
# Results # Results
DelayedUploaderDemo.delay(queue: :demo).generate_result_asset( DelayedUploaderDemo.delay(queue: asset_queue).generate_result_asset(
my_module: my_modules[1], my_module: my_modules[1],
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -651,7 +651,7 @@ module FirstTimeDataGenerator
file_name: 'mock-inoculated-plant.JPG' file_name: 'mock-inoculated-plant.JPG'
) )
DelayedUploaderDemo.delay(queue: :demo).generate_result_asset( DelayedUploaderDemo.delay(queue: asset_queue).generate_result_asset(
my_module: my_modules[1], my_module: my_modules[1],
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -782,7 +782,7 @@ module FirstTimeDataGenerator
).sneaky_save ).sneaky_save
# Second result # Second result
DelayedUploaderDemo.delay(queue: :demo).generate_result_asset( DelayedUploaderDemo.delay(queue: asset_queue).generate_result_asset(
my_module: my_modules[2], my_module: my_modules[2],
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -879,7 +879,7 @@ module FirstTimeDataGenerator
generate_module_steps(my_modules[3], module_step_names, module_step_descriptions) generate_module_steps(my_modules[3], module_step_names, module_step_descriptions)
# Add file to existig step 1 # Add file to existig step 1
DelayedUploaderDemo.delay(queue: :demo).add_step_asset( DelayedUploaderDemo.delay(queue: asset_queue).add_step_asset(
step: my_modules[3].protocol.steps.where('position = 0').take, step: my_modules[3].protocol.steps.where('position = 0').take,
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -978,7 +978,7 @@ module FirstTimeDataGenerator
checklist.save checklist.save
# Results # Results
DelayedUploaderDemo.delay(queue: :demo).generate_result_asset( DelayedUploaderDemo.delay(queue: asset_queue).generate_result_asset(
my_module: my_modules[3], my_module: my_modules[3],
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -1100,35 +1100,35 @@ module FirstTimeDataGenerator
checklist.save checklist.save
# Add file to existig steps # Add file to existig steps
DelayedUploaderDemo.delay(queue: :demo).add_step_asset( DelayedUploaderDemo.delay(queue: asset_queue).add_step_asset(
step: my_modules[5].protocol.steps.where('position = 0').take, step: my_modules[5].protocol.steps.where('position = 0').take,
current_user: user, current_user: user,
current_team: team, current_team: team,
file_name: 'Mixes_Templats.xlsx' file_name: 'Mixes_Templats.xlsx'
) )
DelayedUploaderDemo.delay(queue: :demo).add_step_asset( DelayedUploaderDemo.delay(queue: asset_queue).add_step_asset(
step: my_modules[5].protocol.steps.where('position = 1').take, step: my_modules[5].protocol.steps.where('position = 1').take,
current_user: user, current_user: user,
current_team: team, current_team: team,
file_name: 'qPCR_template.jpg' file_name: 'qPCR_template.jpg'
) )
DelayedUploaderDemo.delay(queue: :demo).add_step_asset( DelayedUploaderDemo.delay(queue: asset_queue).add_step_asset(
step: my_modules[5].protocol.steps.where('position = 1').take, step: my_modules[5].protocol.steps.where('position = 1').take,
current_user: user, current_user: user,
current_team: team, current_team: team,
file_name: '96plate.docx' file_name: '96plate.docx'
) )
DelayedUploaderDemo.delay(queue: :demo).add_step_asset( DelayedUploaderDemo.delay(queue: asset_queue).add_step_asset(
step: my_modules[5].protocol.steps.where('position = 2').take, step: my_modules[5].protocol.steps.where('position = 2').take,
current_user: user, current_user: user,
current_team: team, current_team: team,
file_name: 'cycling_conditions.JPG' file_name: 'cycling_conditions.JPG'
) )
DelayedUploaderDemo.delay(queue: :demo).add_step_asset( DelayedUploaderDemo.delay(queue: asset_queue).add_step_asset(
step: my_modules[5].protocol.steps.where('position = 2').take, step: my_modules[5].protocol.steps.where('position = 2').take,
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -1171,7 +1171,7 @@ module FirstTimeDataGenerator
).sneaky_save ).sneaky_save
# Results # Results
DelayedUploaderDemo.delay(queue: :demo).generate_result_asset( DelayedUploaderDemo.delay(queue: asset_queue).generate_result_asset(
my_module: my_modules[5], my_module: my_modules[5],
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -1180,7 +1180,7 @@ module FirstTimeDataGenerator
file_name: '1505745387970-1058053257.jpg' file_name: '1505745387970-1058053257.jpg'
) )
DelayedUploaderDemo.delay(queue: :demo).generate_result_asset( DelayedUploaderDemo.delay(queue: asset_queue).generate_result_asset(
my_module: my_modules[5], my_module: my_modules[5],
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -1189,7 +1189,7 @@ module FirstTimeDataGenerator
file_name: 'chromatogram.png' file_name: 'chromatogram.png'
) )
DelayedUploaderDemo.delay(queue: :demo).generate_result_asset( DelayedUploaderDemo.delay(queue: asset_queue).generate_result_asset(
my_module: my_modules[5], my_module: my_modules[5],
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -1198,7 +1198,7 @@ module FirstTimeDataGenerator
file_name: 'curves.JPG' file_name: 'curves.JPG'
) )
DelayedUploaderDemo.delay(queue: :demo).generate_result_asset( DelayedUploaderDemo.delay(queue: asset_queue).generate_result_asset(
my_module: my_modules[5], my_module: my_modules[5],
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -1207,7 +1207,7 @@ module FirstTimeDataGenerator
file_name: 'Bacterial_colonies.jpg' file_name: 'Bacterial_colonies.jpg'
) )
DelayedUploaderDemo.delay(queue: :demo).generate_result_asset( DelayedUploaderDemo.delay(queue: asset_queue).generate_result_asset(
my_module: my_modules[5], my_module: my_modules[5],
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -1358,21 +1358,21 @@ module FirstTimeDataGenerator
module_step_descriptions) module_step_descriptions)
# Add file to existig steps # Add file to existig steps
DelayedUploaderDemo.delay(queue: :demo).add_step_asset( DelayedUploaderDemo.delay(queue: asset_queue).add_step_asset(
step: my_modules[6].protocol.steps.where('position = 0').take, step: my_modules[6].protocol.steps.where('position = 0').take,
current_user: user, current_user: user,
current_team: team, current_team: team,
file_name: 'Native_SDS-PAGE_for_complex_analysis.jpg' file_name: 'Native_SDS-PAGE_for_complex_analysis.jpg'
) )
DelayedUploaderDemo.delay(queue: :demo).add_step_asset( DelayedUploaderDemo.delay(queue: asset_queue).add_step_asset(
step: my_modules[6].protocol.steps.where('position = 4').take, step: my_modules[6].protocol.steps.where('position = 4').take,
current_user: user, current_user: user,
current_team: team, current_team: team,
file_name: 'Native-PAGE-Nature_protocols.pdf' file_name: 'Native-PAGE-Nature_protocols.pdf'
) )
DelayedUploaderDemo.delay(queue: :demo).add_step_asset( DelayedUploaderDemo.delay(queue: asset_queue).add_step_asset(
step: my_modules[6].protocol.steps.where('position = 5').take, step: my_modules[6].protocol.steps.where('position = 5').take,
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -1423,14 +1423,14 @@ module FirstTimeDataGenerator
module_step_descriptions) module_step_descriptions)
# Add file to existig step # Add file to existig step
DelayedUploaderDemo.delay(queue: :demo).add_step_asset( DelayedUploaderDemo.delay(queue: asset_queue).add_step_asset(
step: my_modules[7].protocol.steps.where('position = 0').take, step: my_modules[7].protocol.steps.where('position = 0').take,
current_user: user, current_user: user,
current_team: team, current_team: team,
file_name: 'ddCq-quantification_diagnostics-template.xls' file_name: 'ddCq-quantification_diagnostics-template.xls'
) )
DelayedUploaderDemo.delay(queue: :demo).add_step_asset( DelayedUploaderDemo.delay(queue: asset_queue).add_step_asset(
step: my_modules[7].protocol.steps.where('position = 0').take, step: my_modules[7].protocol.steps.where('position = 0').take,
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -1446,7 +1446,7 @@ module FirstTimeDataGenerator
) )
# Add result # Add result
DelayedUploaderDemo.delay(queue: :demo).generate_result_asset( DelayedUploaderDemo.delay(queue: asset_queue).generate_result_asset(
my_module: my_modules[7], my_module: my_modules[7],
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -1455,7 +1455,7 @@ module FirstTimeDataGenerator
file_name: 'ddCq-quantification_diagnostics-results.xls' file_name: 'ddCq-quantification_diagnostics-results.xls'
) )
DelayedUploaderDemo.delay(queue: :demo).generate_result_asset( DelayedUploaderDemo.delay(queue: asset_queue).generate_result_asset(
my_module: my_modules[7], my_module: my_modules[7],
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -1464,7 +1464,7 @@ module FirstTimeDataGenerator
file_name: 'dilution_curve-efficiency.JPG' file_name: 'dilution_curve-efficiency.JPG'
) )
DelayedUploaderDemo.delay(queue: :demo).generate_result_asset( DelayedUploaderDemo.delay(queue: asset_queue).generate_result_asset(
my_module: my_modules[7], my_module: my_modules[7],
current_user: user, current_user: user,
current_team: team, current_team: team,
@ -1477,6 +1477,23 @@ module FirstTimeDataGenerator
experiment.delay.generate_workflow_img experiment.delay.generate_workflow_img
end end
# Used for delayed jobs
def self.seed_demo_data_with_id(user_id, team_id)
extend self
user = User.find(user_id)
team = Team.find(team_id)
unless user || team
Rails.logger.warning("Could not retrieve user or team in " \
"seed_demo_data_with_id. " \
"User #{user_id} was mapped to #{user.inspect}." \
"Team #{team_id} was mapped to #{team.inspect}.")
return
end
seed_demo_data(user, team, :new_demo_project)
end
# WARNING: This only works on PostgreSQL # WARNING: This only works on PostgreSQL
def pluck_random(scope) def pluck_random(scope)
scope.order('RANDOM()').first scope.order('RANDOM()').first

17
lib/tasks/data.rake
View file

@ -146,8 +146,21 @@ namespace :data do
Rails.logger.info('Creating demo project on existing users') Rails.logger.info('Creating demo project on existing users')
User.find_each do |user| Team.all.each_slice(200).with_index do |teams, i|
seed_demo_data(user, user.teams.first) Rails.logger.info("Processing slice with index #{i}. " \
"First team: #{teams.first.id}, " \
"Last team: #{teams.last.id}.")
teams.each do |team|
owner_ut = team.user_teams.where(role: 2).first
next unless owner_ut
FirstTimeDataGenerator.delay(
run_at: i.hours.from_now,
queue: :new_demo_project,
priority: 1
).seed_demo_data_with_id(owner_ut.user.id, team.id)
end
end end
end end
end end