Merge pull request #2293 from aignatov-bio/ai-sci-4223-add-smart-annotations-to-text-fields

Add smart annotations to repository text value [SCI-4223]

app/helpers/repository_datatable_helper.rb

@@ -6,7 +6,7 @@ module RepositoryDatatableHelper
   def prepare_row_columns(repository_rows,
                           repository,
                           columns_mappings,
-                          _team,
+                          team,
                           assigned_rows)
     parsed_records = []
     includes_json = { repository_cells: Extends::REPOSITORY_SEARCH_INCLUDES }
@@ -36,7 +36,7 @@ module RepositoryDatatableHelper
       # Add custom columns
       record.repository_cells.each do |cell|
         row[columns_mappings[cell.repository_column.id]] =
-          display_cell_value(cell)
+          display_cell_value(cell, team)
       end
       parsed_records << row
     end
@@ -66,8 +66,8 @@ module RepositoryDatatableHelper
     Constants::REPOSITORY_TABLE_DEFAULT_STATE['columns'].to_json
   end
 
-  def display_cell_value(cell)
+  def display_cell_value(cell, team)
     "RepositoryDatatable::#{cell.repository_column.data_type}Serializer"
-      .constantize.new(cell.value).serializable_hash
+      .constantize.new(cell.value, scope: { team: team, user: current_user }).serializable_hash
   end
 end

app/serializers/repository_datatable/repository_text_value_serializer.rb

@@ -2,8 +2,15 @@
 
 module RepositoryDatatable
   class RepositoryTextValueSerializer < RepositoryBaseValueSerializer
+    include InputSanitizeHelper
+    include ActionView::Helpers::TextHelper
+    include ApplicationHelper
+
     def value
-      object.data
+      @user = scope[:user]
+      custom_auto_link(object.data,
+                       simple_format: true,
+                       team: scope[:team])
     end
   end
 end