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https://github.com/scinote-eln/scinote-web.git
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Update export all generator
This commit is contained in:
aignatov-bio
parent
e240b629c4
commit
bdcc7939ad
2 changed files with 105 additions and 134 deletions
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@ -92,10 +92,7 @@ class Report < ApplicationRecord
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end
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def self.generate_whole_project_report(project, current_user, current_team)
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report_contents = gen_element_content(project, nil, 'project_header', true)
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Extends::EXPORT_ALL_PROJECT_ELEMENTS.each do |report_element, children|
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report_contents += public_send("generate_#{report_element}_element", project, children)
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end
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report_contents = gen_element_content(project, Extends::EXPORT_ALL_PROJECT_ELEMENTS)
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report = Report.new
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report.name = loop do
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@ -110,126 +107,32 @@ class Report < ApplicationRecord
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report
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end
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def self.gen_element_content(parent_obj, association_objs, type_of,
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use_parent_id = false, sort_order = nil,
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children = nil)
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parent_type = parent_obj.class.name.underscore
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type = type_of.split('_').last.singularize
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extra_id_needed = use_parent_id && !association_objs.nil?
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def self.gen_element_content(parent, children)
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elements = []
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association_objs ||= [nil]
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association_objs.each do |obj|
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elements << {
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'type_of' => type_of,
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'id' => {}.tap do |ids_hash|
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if use_parent_id
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ids_hash["#{parent_type}_id"] = parent_obj.id
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else
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ids_hash["#{type}_id"] = obj.id
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end
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ids_hash["#{type}_id"] = obj.id if extra_id_needed
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end,
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'sort_order' => sort_order.presence,
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'children' => children.presence || []
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children.each do |element|
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element_hash = lambda { |object|
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hash_object = {
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'type_of' => element[:type_of] || element[:type_of_lambda].call(object),
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'id' => { element[:id_key] => object.id },
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'sort_order' => element[:sort_order],
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'children' => gen_element_content(object, element[:children])
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}
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hash_object['id'][element[:parent_id_key]] = parent.id if element[:parent_id_key]
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hash_object
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}
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end
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if element[:relation]
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(element[:relation].inject(parent) { |p, method| p.public_send(method) }).each do |child|
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elements.push(element_hash.call(child))
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end
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else
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elements.push(element_hash.call(parent))
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end
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end
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elements
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end
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def self.generate_experiments_element(project, elements)
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experiments = []
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project.experiments.each do |experiment|
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experiment_contents = []
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elements.each do |report_element, children|
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experiment_contents += public_send("generate_#{report_element}_element", experiment, children)
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end
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experiments += gen_element_content(experiment, nil, 'experiment', true, nil, experiment_contents)
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end
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experiments
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end
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def self.generate_my_modules_element(experiment, elements)
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my_modules = []
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experiment.my_modules.each do |my_module|
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my_module_contents = []
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elements.each do |report_element, children|
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my_module_contents += public_send("generate_#{report_element}_element", my_module, children)
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end
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my_modules += gen_element_content(my_module, nil, 'my_module', true, nil, my_module_contents)
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end
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my_modules
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end
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def self.generate_my_module_protocol_element(my_module, elements)
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protcol_contents = []
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elements.each do |report_element, children|
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protcol_contents += public_send("generate_#{report_element}_element", my_module, children)
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end
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gen_element_content(my_module, nil, 'my_module_protocol', true, nil, protcol_contents)
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end
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def self.generate_my_module_steps_element(my_module, elements)
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steps = []
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my_module.protocol.steps.each do |step|
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step_contents = []
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elements.each do |report_element, children|
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step_contents += public_send("generate_#{report_element}_element", step, children)
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end
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steps += gen_element_content(step, nil, 'step', true, nil, step_contents)
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end
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steps
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end
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def self.generate_step_assets_element(step, _elements)
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gen_element_content(step, step.assets, 'step_asset')
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end
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def self.generate_step_tables_element(step, _elements)
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gen_element_content(step, step.tables, 'step_table')
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end
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def self.generate_step_checklists_element(step, _elements)
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gen_element_content(step, step.checklists, 'step_checklist')
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end
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def self.generate_step_comments_element(step, _elements)
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gen_element_content(step, nil, 'step_comments', true, 'asc')
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end
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def self.generate_my_module_results_element(my_module, elements)
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results = []
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my_module.results.each do |result|
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result_contents = []
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elements.each do |report_element, children|
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result_contents += public_send("generate_#{report_element}_element", result, children)
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end
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result_type = if result.asset
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'result_asset'
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elsif result.table
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'result_table'
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elsif result.result_text
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'result_text'
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end
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results += gen_element_content(result, nil, result_type, true, nil, result_contents)
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end
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results
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end
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def self.generate_result_comments_element(result, _elements)
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gen_element_content(result, nil, 'result_comments', true, 'asc')
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end
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def self.generate_my_module_activities_element(my_module, _elements)
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gen_element_content(my_module, nil, 'my_module_activity', true, 'asc')
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end
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def self.generate_my_module_repositories_element(my_module, _elements)
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repositories = my_module.experiment.project.assigned_repositories_and_snapshots
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gen_element_content(my_module, repositories, 'my_module_repository', true, 'asc')
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end
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private
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# Recursively save a single JSON element
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@ -41,24 +41,92 @@ class Extends
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my_module_repository: 17,
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my_module_protocol: 18 }
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EXPORT_ALL_PROJECT_ELEMENTS = {
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experiments: {
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my_modules: {
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my_module_protocol: {},
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my_module_steps: {
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step_assets: {},
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step_tables: {},
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step_checklists: {},
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step_comments: {}
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},
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my_module_results: {
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result_comments: {}
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},
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my_module_activities: {},
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my_module_repositories: {}
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}
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EXPORT_ALL_PROJECT_ELEMENTS = [
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{
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type_of: 'project_header',
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id_key: 'project_id',
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children: []
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},
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{
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type_of: 'experiment',
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id_key: 'experiment_id',
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relation: %w(experiments),
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children: [
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{
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type_of: 'my_module',
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id_key: 'my_module_id',
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relation: %w(my_modules),
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children: [
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{
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type_of: 'my_module_protocol',
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id_key: 'my_module_id',
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children: []
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},
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{
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type_of: 'step',
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relation: %w(protocol steps),
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id_key: 'step_id',
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children: [
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{
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type_of: 'step_asset',
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relation: %w(assets),
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id_key: 'asset_id',
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children: []
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},
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{
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type_of: 'step_table',
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relation: %w(tables),
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id_key: 'table_id',
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children: []
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},
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{
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type_of: 'step_checklist',
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relation: %w(checklists),
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id_key: 'checklist_id',
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children: []
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},
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{
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type_of: 'step_comments',
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id_key: 'step_id',
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sort_order: 'asc',
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children: []
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}
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]
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},
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{
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type_of_lambda: lambda { |result|
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(result.result_asset ||
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result.result_table ||
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result.result_text).class.to_s.underscore
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},
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relation: %w(results),
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id_key: 'result_id',
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children: [{
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type_of: 'result_comments',
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id_key: 'result_id',
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sort_order: 'asc',
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children: []
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}]
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},
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{
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type_of: 'my_module_activity',
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id_key: 'my_module_id',
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sort_order: 'asc',
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children: []
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},
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{
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type_of: 'my_module_repository',
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relation: %w(experiment project assigned_repositories_and_snapshots),
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id_key: 'repository_id',
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parent_id_key: 'my_module_id',
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sort_order: 'asc',
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children: []
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}
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]
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}
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]
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}
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}
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]
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# Data type name should match corresponding model's name
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REPOSITORY_DATA_TYPES = { RepositoryTextValue: 0,
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