Merge pull request #4215 from aignatov-bio/ai-sci-6939-fix-smart-annotation-in-new-steps

Fix smart annotation for step editing [SCI-6939]

app/assets/stylesheets/steps/components/text.scss

@@ -5,28 +5,21 @@
   position: relative;
   width: calc(100% + 16px);
 
-  .action-container {
-    cursor: pointer;
-    height: 100%;
-    left: 0;
-    position: absolute;
-    width: 100%;
-    z-index: 100;
 
-    .buttons-container {
-      background: linear-gradient(
-        90deg,
-        transparent 0%,
-        $color-concrete 25%,
-        $color-concrete 100%
-      );
-      display: none;
-      padding-left: 2em;
-      position: absolute;
-      right: 0;
-    }
+  .buttons-container {
+    background: linear-gradient(
+      90deg,
+      transparent 0%,
+      $color-concrete 25%,
+      $color-concrete 100%
+    );
+    display: none;
+    padding-left: 2em;
+    position: absolute;
+    right: 0;
   }
 
+
   .element-grip {
     align-items: center;
     color: $color-silver-chalice;
@@ -66,7 +59,8 @@
   }
 
   &.edit {
-    .action-container {
+    .buttons-container,
+    .element-grip {
       display: none;
     }
   }

app/javascript/vue/protocol/step.vue

@@ -298,14 +298,14 @@
         let index = this.elements.findIndex((e) => e.id === element.id);
 
         if (skipRequest) {
-          this.elements[index].orderable = element;
+          this.elements[index].attributes.orderable = element.attributes.orderable;
         } else {
           $.ajax({
             url: element.attributes.orderable.urls.update_url,
             method: 'PUT',
             data: element.attributes.orderable,
             success: (result) => {
-              this.elements[index].orderable = result;
+              this.elements[index].attributes.orderable = result.data.attributes;
             }
           }).error(() => {
             HelperModule.flashAlertMsg(this.i18n.t('errors.general'), 'danger');

app/javascript/vue/protocol/step_elements/checklist.vue

@@ -8,10 +8,12 @@
         <InlineEdit
           v-if="element.attributes.orderable.urls.update_url"
           :value="element.attributes.orderable.name"
+          :sa_value="element.attributes.orderable.sa_name"
           :characterLimit="255"
           :placeholder="''"
           :allowBlank="false"
           :autofocus="editingName"
+          :smartAnnotation="true"
           :attributeName="`${i18n.t('Checklist')} ${i18n.t('name')}`"
           @editingEnabled="editingName = true"
           @editingDisabled="editingName = false"
@@ -149,13 +151,16 @@
       },
       saveItem(item) {
         if (item.attributes.id) {
-          this.checklistItems.splice(
-            item.attributes.position, 1, item
-          );
           $.ajax({
             url: item.attributes.urls.update_url,
             type: 'PATCH',
             data: item,
+            success: (result) => {
+              let updatedItem = this.checklistItems[item.attributes.position]
+              updatedItem.attributes = result.data.attributes
+              updatedItem.attributes.id = item.attributes.id
+              this.$set(this.checklistItems, item.attributes.position, updatedItem)
+            },
             error: () => HelperModule.flashAlertMsg(this.i18n.t('errors.general'), 'danger')
           });
         } else {

app/javascript/vue/protocol/step_elements/checklistItem.vue

@@ -17,12 +17,14 @@
           <InlineEdit
             v-if="!checklistItem.attributes.urls || updateUrl"
             :value="checklistItem.attributes.text"
+            :sa_value="checklistItem.attributes.sa_text"
             :characterLimit="10000"
             :placeholder="''"
             :allowBlank="true"
             :autofocus="editingText"
             :attributeName="`${i18n.t('ChecklistItem')} ${i18n.t('name')}`"
             :multilinePaste="true"
+            :smartAnnotation="true"
             @editingEnabled="enableTextEdit"
             @editingDisabled="disableTextEdit"
             @update="updateText"

app/javascript/vue/protocol/step_elements/text.vue

@@ -1,21 +1,18 @@
 <template>
   <div class="step-text-container" :class="{ 'edit': inEditMode }" @keyup.enter="enableEditMode($event)" tabindex="0">
-    <div ref="actionContainer" class="action-container" @click="enableEditMode($event)">
-      <div v-if="reorderElementUrl" class="element-grip" @click="$emit('reorder')">
-        <i class="fas fa-grip-vertical"></i>
-      </div>
-      <div class="buttons-container">
-        <button v-if="element.attributes.orderable.urls.update_url" class="btn icon-btn btn-light" tabindex="-1">
-          <i class="fas fa-pen"></i>
-        </button>
-        <button v-if="element.attributes.orderable.urls.delete_url" class="btn icon-btn btn-light" @click="showDeleteModal" tabindex="-1">
-          <i class="fas fa-trash"></i>
-        </button>
-      </div>
+    <div v-if="reorderElementUrl" class="element-grip" @click="$emit('reorder')">
+      <i class="fas fa-grip-vertical"></i>
+    </div>
+    <div class="buttons-container">
+      <button v-if="element.attributes.orderable.urls.update_url" class="btn icon-btn btn-light" tabindex="-1" @click="enableEditMode($event)">
+        <i class="fas fa-pen"></i>
+      </button>
+      <button v-if="element.attributes.orderable.urls.delete_url" class="btn icon-btn btn-light" @click="showDeleteModal" tabindex="-1">
+        <i class="fas fa-trash"></i>
+      </button>
     </div>
     <Tinymce
       v-if="element.attributes.orderable.urls.update_url"
-      :inEditMode="inEditMode"
       :value="element.attributes.orderable.text"
       :value_html="element.attributes.orderable.text_view"
       :placeholder="i18n.t('protocols.steps.text.placeholder')"
@@ -26,6 +23,7 @@
       :lastUpdated="element.attributes.orderable.updated_at"
       @update="update"
       @editingDisabled="disableEditMode"
+      @editingEnabled="enableEditMode"
     />
     <div v-else v-html="element.attributes.orderable.text_view"></div>
     <deleteElementModal v-if="confirmingDelete" @confirm="deleteElement($event)" @cancel="closeDeleteModal"/>
@@ -70,10 +68,6 @@
     },
     methods: {
       enableEditMode() {
-        if (
-          $(this.$refs.actionContainer).hasClass('fas fa-grip-vertical') ||
-          $(this.$refs.actionContainer).hasClass('element-grip')
-        ) return
         if (!this.element.attributes.orderable.urls.update_url) return
         if (this.inEditMode == true) return
         this.inEditMode = true

app/javascript/vue/shared/inline_edit.vue

@@ -1,5 +1,5 @@
 <template>
-  <div class="sci-inline-edit" :class="{ 'editing': editing }" tabindex="0" @keyup.enter="enableEdit">
+  <div class="sci-inline-edit" :class="{ 'editing': editing }" tabindex="0" @keyup.enter="enableEdit($event)">
     <div class="sci-inline-edit__content">
       <textarea
         ref="input"
@@ -13,7 +13,7 @@
         @paste="handlePaste"
         @blur="handleBlur"
       ></textarea>
-      <div v-else @click="enableEdit" class="sci-inline-edit__view" :class="{ 'blank': isBlank }">{{ value || placeholder }}</div>
+      <div v-else @click="enableEdit($event)" class="sci-inline-edit__view" v-html="sa_value || value || placeholder" :class="{ 'blank': isBlank }"></div>
       <div v-if="editing && error" class="sci-inline-edit__error">
         {{ error }}
       </div>
@@ -34,12 +34,14 @@
     name: 'InlineEdit',
     props: {
       value: { type: String, default: '' },
+      sa_value: { type: String},
       allowBlank: { type: Boolean, default: true },
       attributeName: { type: String, required: true },
       characterLimit: { type: Number },
       placeholder: { type: String },
       autofocus: { type: Boolean, default: false },
       multilinePaste: { type: Boolean, default: false },
+      smartAnnotation: { type: Boolean, default: false },
       editOnload: { type: Boolean, default: false }
     },
     data() {
@@ -89,6 +91,8 @@
         }
       },
       handleBlur() {
+        if ($('.atwho-view:visible').length) return;
+
         if (this.allowBlank || !this.isBlank) {
           this.$nextTick(this.update);
         } else {
@@ -103,9 +107,15 @@
           this.resize();
         });
       },
-      enableEdit() {
+      enableEdit(e) {
+        if (e && $(e.target).hasClass('atwho-user-popover')) return
         this.editing = true;
         this.focus();
+        this.$nextTick(() => {
+          if (this.smartAnnotation) {
+            SmartAnnotation.init($(this.$refs.input));
+          }
+        })
         this.$emit('editingEnabled');
       },
       cancelEdit() {
@@ -145,7 +155,7 @@
         setTimeout(() => {
           if(!this.allowBlank && this.isBlank) return;
           if(!this.editing) return;
-
+          this.newValue = this.$refs.input.value // Fix for smart annotation
           this.newValue = this.newValue.trim();
           this.editing = false;
           this.$emit('editingDisabled');

app/serializers/checklist_item_serializer.rb

@@ -3,8 +3,18 @@
 class ChecklistItemSerializer < ActiveModel::Serializer
   include Canaid::Helpers::PermissionsHelper
   include Rails.application.routes.url_helpers
+  include ApplicationHelper
+  include ActionView::Helpers::TextHelper
 
-  attributes :id, :text, :checked, :position, :urls
+  attributes :id, :text, :checked, :position, :urls, :sa_text
+
+  def sa_text
+    @user = scope[:user] || @instance_options[:user]
+    custom_auto_link(object.text,
+                     simple_format: false,
+                     tags: %w(img),
+                     team: object.checklist.step.protocol.team)
+  end
 
   def urls
     return {} if object.destroyed? ||

app/serializers/checklist_serializer.rb

@@ -3,14 +3,24 @@
 class ChecklistSerializer < ActiveModel::Serializer
   include Canaid::Helpers::PermissionsHelper
   include Rails.application.routes.url_helpers
+  include ApplicationHelper
+  include ActionView::Helpers::TextHelper
 
-  attributes :id, :name, :urls, :icon
+  attributes :id, :name, :urls, :icon, :sa_name
   has_many :checklist_items, serializer: ChecklistItemSerializer
 
   def icon
     'fa-list-ul'
   end
 
+  def sa_name
+    @user = scope[:user] || @instance_options[:user]
+    custom_auto_link(object.name,
+                     simple_format: false,
+                     tags: %w(img),
+                     team: object.step.protocol.team)
+  end
+
   def urls
     return {} if object.destroyed? || !can_manage_step?(scope[:user] || @instance_options[:user], object.step)