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2682 commits 70 branches 179 tags 165 MiB
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594 commits

Author SHA1 Message Date
Luka Murn ae5bccf709 Merge branch 'master' into rails-5.1 
Conflicts:
	Gemfile.lock
	app/datatables/repository_datatable.rb
	app/models/repository_cell.rb
 2017-08-07 08:45:53 +02:00
Oleksii Kriuchykhin 35b643f34e Fix typo in config and code style improvements [SCI-1507] 2017-08-04 10:19:56 +02:00
Oleksii Kriuchykhin e958410261 Add core API using JWT authentication and tests for it [SCI-1507] 2017-08-03 17:00:14 +02:00
zmagod c314bae28d add team switch js/controller 2017-08-03 16:03:15 +02:00
zmagod 6ef19725f1 adds redux 2017-08-02 17:27:05 +02:00
zmagod caae1e2fe8 adds intl, router, bootstrap to npm modules 2017-07-31 10:42:40 +02:00
zmagod a46e28a85a fixes signup spec [fixes SCI-1471] 2017-07-28 15:37:28 +02:00
Luka Murn 03a7440136 Remove SkyLight stuff (we're not using it any more) 2017-07-27 14:26:44 +02:00
Toni Dezman 78f26525e9 Settings SPA works 2017-07-27 13:53:29 +02:00
zmagod 416ab8eee3 Merge branch 'rails-5.1' of https://github.com/biosistemika/scinote-web into zd_SCI_1400 2017-07-26 16:20:09 +02:00
zmagod c34e4a0814 fix background worker bug 2017-07-26 13:31:36 +02:00
Oleksii Kriuchykhin 6c33b46f6a Improve import of repository records plus tsv file import fixes [SCI-1487] 2017-07-20 11:44:10 +02:00
Zmago Devetak 7b898666da Merge pull request #745 from ZmagoD/zd_SCI_1485 
refactor repositories js files [fixes SCI-1485]
 2017-07-19 11:17:52 +02:00
Oleksii Kriuchykhin ece27b2652 Fix importing files with empty header cells and error messages improvements [SCI-1484] 2017-07-18 14:54:35 +02:00
zmagod a2b7bcda4c refactor repositories js files [fixes SCI-1485] 2017-07-17 15:05:28 +02:00
Oleksii Kriuchykhin 036ee390ed Fix error messages in repository import and uploading files starting with hyphen[SCI-1484] 2017-07-14 16:19:03 +02:00
Oleksii Kriuchykhin b8e93ee883 Add Webpacker and React [SCI-1461] 2017-07-12 16:41:55 +02:00
Luka Murn 1dc3e49367 Merge pull request #739 from Ducz0r/lm-sci-1432 
Extend confirmation period of emails to 7 days [SCI-1432]
 2017-07-11 10:57:16 +02:00
Luka Murn 19a8dfe116 Extend confirmation period of emails to 7 days 
Closes SCI-1432.
 2017-07-11 08:32:52 +02:00
Luka Murn 3e80f761b8 Add "about" modal, prepare hooks, VERSION system for addons 
Also the addon generator is fixed so it properly creates VERSION
file for new addons.
 2017-07-10 15:27:50 +02:00
Luka Murn 16e672b9d8 Add VERSION file where the sciNote Core version is stored 2017-07-10 09:26:35 +02:00
Luka Murn bc8d945101 Damn, I spent too much time on GeneIO. Fixing again >_< 2017-07-07 13:19:39 +02:00
Luka Murn e9ef7b61ef Fix WickedPdf bug on production 2017-07-07 13:05:18 +02:00
mz3944 f55861b373 Merge pull request #731 from mz3944/mz-SCI-1413 
Fixed some RoR 5.1 default settings. [SCI-1413]
 2017-07-06 17:17:27 +02:00
Luka Murn 4317da343b Don't use listen gem in development mode 2017-07-06 16:49:50 +02:00
Luka Murn 9f60ece25f Merge branch 'master' into rails-5.1 
Conflicts:
	app/models/repository.rb
	app/models/repository_row.rb
	app/views/projects/index.html.erb
	app/views/shared/_secondary_navigation.html.erb
 2017-07-06 15:12:15 +02:00
Matej Zrimšek 9d0fd4e76f Reverted settings for WebSockets, because we might use redis subscription adapter. [SCI-1413] 2017-07-06 12:55:58 +02:00
zmagod 750c82a80f setup testing tools [fixes SCI-1400] 2017-07-06 09:07:05 +02:00
Matej Zrimšek 843116f645 Fixed some RoR 5.1 default settings. [SCI-1413] 2017-07-04 14:42:53 +02:00
Luka Murn 9a19cb711f Version bump to 1.12.1 2017-07-04 08:00:32 +02:00
zmagod fd13921720 fixes repeat tutorial [fixes SCI-1410] 2017-06-29 11:00:50 +02:00
zmagod 525c9770ac fixes experiment page [fixes SCI-1395] 2017-06-28 15:21:32 +02:00
zmagod 71aa05bb0e refactor 2017-06-27 14:58:49 +02:00
mlorb 025050a7cd Merge pull request #716 from mlorb/ml-sci-1420 
Add tooltips to navigation bar [SCI-1420]
 2017-06-27 14:52:07 +02:00
Mojca Lorber d03be76f35 add tooltips to archive buttons 2017-06-27 14:48:45 +02:00
Mojca Lorber 6bfb5e125c add tooltips to navigation bar 2017-06-27 13:46:49 +02:00
okriuchykhin d126391940 Merge pull request #710 from okriuchykhin/ok_SCI_1356 
Add global search in custom repositories [SCI-1356]
 2017-06-27 13:41:53 +02:00
mz3944 ca59ac5e36 Merge pull request #714 from mz3944/mz-SCI-1402 
Missing error message when not selecting name in case of import repository file [SCI-1402]
 2017-06-27 11:54:26 +02:00
Matej Zrimšek f847b44067 Error is displayed and import is prevented in case repository name column is not mapped, when importing repository items from file. [SCI-1402] 2017-06-26 16:50:40 +02:00
Oleksii Kriuchykhin 84556cf744 Fix naming of repository items in modal and messages [SCI-1404] 2017-06-26 16:03:02 +02:00
Oleksii Kriuchykhin e038bc58fa Add global search in custom repositories [SCI-1356] 2017-06-23 16:12:56 +02:00
zmagod 819f47b450 setup sciNote for Rails 5.1 2017-06-23 15:19:08 +02:00
Zmago Devetak d726c121bc Version bump to 1.12.0 2017-06-23 12:37:19 +02:00
Matej Zrimšek be855e98db Changed repository records filter naming. [SCI-1398] 2017-06-23 10:16:50 +02:00
zmagod bad52ceff1 Merge branch 'master' of https://github.com/biosistemika/scinote-web into zd_SCI_1336 2017-06-21 15:56:07 +02:00
zmagod f66fb49b56 adds import records to repositories [fixes SCI-1336] 2017-06-21 14:45:50 +02:00
zmagod f64e1ac713 fix locales 2017-06-21 09:31:39 +02:00
mlorb 122ac7971f Merge pull request #692 from mlorb/ml_sci_1348 
Fix cog position on repositories page [SCI-1348]
 2017-06-19 15:16:01 +02:00
Mojca Lorber 86530bbda0 fix flash text 2017-06-16 14:41:50 +02:00
Mojca Lorber b6f146f177 fix cog position on repositories page 2017-06-16 11:54:31 +02:00
Mojca Lorber 4566fc7191 fix text in activity for assign/unassign records message 2017-06-15 10:06:12 +02:00
Mojca Lorber 77d922a5e8 change the name of add record/repository in repositories 2017-06-13 09:45:18 +02:00
zmagod a865253a2e first run 2017-06-13 08:10:10 +02:00
rekonder ede744849b Export repository [aj-SCI-1275] 2017-06-09 19:44:28 +02:00
Luka Murn e26337d5ee Merge pull request #671 from biosistemika/custom-repositories 
Merge custom-repositories into master
 2017-06-09 18:46:47 +02:00
Zmago Devetak 4873624cec Merge pull request #658 from ZmagoD/zd_SCI_1011 
Multiple file upload with drag & drop capability in steps and results
 2017-06-09 10:03:33 +02:00
Mojca Lorber 71c523c406 load tabs with javascript 2017-06-08 13:47:30 +02:00
Luka Murn 810599bef2 Fix en.yml localization bug 2017-06-08 13:36:37 +02:00
Luka Murn 2ab31aba2f Merge pull request #660 from Ducz0r/lm-sci-1270 
Copy repository functionality [SCI-1270]
 2017-06-08 11:45:57 +02:00
Luka Murn 27feb46d8f Merge pull request #659 from Ducz0r/lm-sci-1279 
Include repositories in reports [SCI-1279]
 2017-06-08 11:24:21 +02:00
Luka Murn e0828657b3 Somebody kill the Hound please 2017-06-08 11:23:24 +02:00
Luka Murn 9bfbf3b634 Minor fix #2 2017-06-08 11:22:27 +02:00
Luka Murn b729c06f31 Minor fix 2017-06-08 11:20:11 +02:00
Luka Murn 61eb52f86f Implement GUI for copying repositories 
Closes SCI.1270.
 2017-06-07 19:11:25 +02:00
Luka Murn 38361e4bb4 Setup initial GUI 2017-06-07 18:43:48 +02:00
Luka Murn 0aee11d6d8 Hound is love, Hound is life #2 2017-06-07 18:26:32 +02:00
Luka Murn 42f7b4f68d Hound is love, Hound is life 2017-06-07 18:22:15 +02:00
Matej Zrimšek 77a225ec31 Added toggle between assigned and all repository records. [SCI-1276] 2017-06-07 18:13:25 +02:00
Luka Murn 02dd6636ba Allow saving & editing of reports with repository elements 
Closes SCI-1279.
 2017-06-07 16:55:00 +02:00
Luka Murn b5f6d1da94 Allow custom repositories to be added to reports 2017-06-07 16:54:32 +02:00
Oleksii Kriuchykhin c18bba9fbe Fix rebase errors [SCI-1274] 2017-06-07 15:50:22 +02:00
Oleksii Kriuchykhin 8b1190060e Add custom repository table [SCI-1274] 2017-06-07 15:23:25 +02:00
Zmago Devetak fcec42ae31 Merge pull request #645 from ZmagoD/zd_SCI_1278 
generates samples csv file in background job [fixes SCI-1278]
 2017-06-07 15:04:24 +02:00
zmagod c6bb20039b adds drag'n drop feature in task results [fixes SCI-1011], [fixes SCI-1310] and [fixes SCI-285] 2017-06-07 13:29:39 +02:00
Mojca Lorber 51c4eeb106 renaming 2017-06-06 15:50:43 +02:00
ajugo 887d9a4f52 Samples - show all/show assigned [SCI-1277] (#644) 
* Samples - show all/show assigned [SCI-1277]

* Some fixes in code

* Some minor fixes in code

* Omit present

* Correct missed present

* Fixing hound warnings
 2017-06-06 12:46:56 +02:00
Mojca Lorber acdea2198d code changes after rebasing 2017-06-06 11:10:55 +02:00
Mojca Lorber 13bf4ad229 create new repository 2017-06-06 09:54:39 +02:00
Matej Zrimšek 2c6ad4aa05 Refactored modal popups for repositories to make them general. [fix 1269] 2017-06-05 14:13:24 +02:00
zmagod 67d902db52 refactor 2017-06-05 10:43:58 +02:00
Matej Zrimšek d8d54232c3 After repository renaming user is redirected to the same repository. Removed the unimplemented repository copy dropdown option. [SCI-1269] 2017-06-02 19:08:51 +02:00
Matej Zrimšek 73aaef0949 Fixe repository rename modal submit button. Consistent variable renaming. [SCI-1269] 2017-06-02 17:52:04 +02:00
Matej Zrimšek 21a72da84f Added rename logic and improved remove logic. [SCI-1269] 2017-06-02 17:50:34 +02:00
Matej Zrimšek cdaac6a01b Added remove repository modal logic. [SCI-1269] 2017-06-02 17:50:33 +02:00
Matej Zrimšek 791bb934ca Remove repository modal logic (WIP). [SCI-1269] 2017-06-02 17:50:33 +02:00
Matej Zrimšek b92a760a5c Added dropdown GUI for editing repository. [SCI-1269] 2017-06-02 17:47:28 +02:00
Luka Murn fcc3995049 Merge pull request #647 from biosistemika/master 
Bring latest master changes into custom-repositories
 2017-05-30 14:18:14 +02:00
zmagod b527afd12b generates samples csv file in background job [fixes SCI-1278] 2017-05-29 14:42:55 +02:00
mz3944 689587c4fc Merge pull request #643 from mz3944/mz-SCI-1305 
Handled user removal from the team for user smart annotation [fixes SCI-1305]
 2017-05-29 12:52:19 +02:00
Matej Zrimšek e8f842c29f Forgot to add the updated locales. [fixes SCI-1305] 2017-05-29 11:39:17 +02:00
Zmago Devetak 2224c6511d Merge pull request #630 from ZmagoD/zd_SCI_1240_v2 
fix label [fixes SCI-1240]
 2017-05-29 09:01:30 +02:00
mlorb 872f712be8 Merge branch 'custom-repositories' into ml_sci_1266_v2 2017-05-23 11:05:25 +02:00
mz3944 6b8c8deb16 Merge pull request #634 from mz3944/mz-SCI-414 
Uncompleted steps not added to Reports
 2017-05-23 09:58:05 +02:00
mz3944 9fe3b717c8 Merge pull request #626 from mz3944/mz-SCI-487 
Simplify "Add contents to report" popup
 2017-05-23 09:57:39 +02:00
Mojca Lorber 9ae615264d add global repositories screen - tab control 2017-05-22 17:54:30 +02:00
Oleksii Kriuchykhin e99e3edb7b Add repositories dropdown to task navigation [SCI-1273] 2017-05-18 14:21:00 +02:00
Luka Murn 4c5d7267ac Version bump to 1.11.0 2017-05-18 13:48:02 +02:00
Matej Zrimšek f78c80b148 Added possibility to add uncompleted steps to report. [closes SCI-414] 2017-05-17 13:25:21 +02:00
zmagod b8b47542a6 fix label [fixes SCI-1240] 2017-05-16 16:08:29 +02:00
Oleksii Kriuchykhin 72a651c7de Add migrations and models for custom repositories [SCI-1267] 2017-05-16 15:27:36 +02:00