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1068 commits

Author SHA1 Message Date
Oleksii Kriuchykhin
401b37956b Simplify protocol export start [SCI-742] 2017-01-23 17:43:48 +01:00
Oleksii Kriuchykhin
d555ba7905 Add export to protocol management page and code style improvements [SCI-742] 2017-01-23 17:43:48 +01:00
Oleksii Kriuchykhin
14a6705b55 Implemented protocol export through Zip::OutputStream [SCI-742] 2017-01-23 17:43:48 +01:00
zmagod
9c3bc8dac7 fixes checklist item user popover bug [fixes SCI-907] 2017-01-23 09:47:04 +01:00
mz3944
fd63a1de12 Merge pull request #432 from mlorb/ml-sci-fix-847 
Add dynamic length for sample type/group field when adding new sample [SCI-847]
 2017-01-20 15:46:34 +01:00
mz3944
18a2e4c423 Merge pull request #433 from mz3944/mz-sci-914 
Edit of a sample in sample table does not work
 2017-01-20 13:02:05 +01:00
Zmago Devetak
c1e7cc83a7 Merge pull request #434 from ZmagoD/zd_SCI_915 
Text is deleted when entering smart annotation in rich text editor
 2017-01-20 13:01:29 +01:00
Zmago Devetak
7bd368e002 Merge pull request #431 from ZmagoD/zd_add_code_highlight 
Fixes code highlight and smart annotations experiments bug
 2017-01-20 12:59:21 +01:00
zmagod
71453398b1 bugfix 2017-01-20 11:33:49 +01:00
zmagod
4f7d62e79d removes unneeded annotations [fixes SCI-915] 2017-01-20 11:33:10 +01:00
Matej Zrimšek
5d65627808 Fixed sample editing in samples table. [SCI-914] 2017-01-20 11:10:17 +01:00
Mojca Lorber
3789769af3 add dynamic length for sample type/group field when adding new sample 2017-01-20 09:53:44 +01:00
zmagod
9550c6dd35 fixes highlight.js 2017-01-19 17:09:25 +01:00
Matej Zrimšek
54f8b01341 Removed smart annotation filter button disabling, when no results are found for that filter (so that 'no result found' displays instead). [SCI-894] 2017-01-19 15:26:28 +01:00
Oleksii Kriuchykhin
890c5e3c3d Add “no results found” message in smart annotation [SCI-886] 2017-01-19 13:42:58 +01:00
Zmago Devetak
039a8d7da6 Merge pull request #426 from ZmagoD/zd_add_tinyMCE 
Add tiny mce
 2017-01-19 12:57:55 +01:00
zmagod
2cbb8ba41a removed unneeded comments 2017-01-19 12:54:48 +01:00
mz3944
da604d2619 Merge pull request #427 from mz3944/mz-sci-908 
Some smart annotations refactoring [SCI-908]
 2017-01-19 12:15:20 +01:00
zmagod
f2d5066dc7 fix some bugs 2017-01-19 11:37:59 +01:00
Matej Zrimšek
5d86bbb812 Smart annotations improved documentation. [SCI-908] 2017-01-19 10:56:02 +01:00
Matej Zrimšek
fec83e8c45 Smart annotations refactoring. [SCI-908] 2017-01-19 10:55:43 +01:00
zmagod
2ccafdd670 bug fix 2017-01-19 10:12:01 +01:00
zmagod
27d3868f37 fix bugs 2017-01-19 09:40:39 +01:00
zmagod
88d7cb200e removed quill 2017-01-18 23:06:14 +01:00
zmagod
65fa631b1c adding tinyMce first run 2017-01-18 22:40:08 +01:00
okriuchykhin
18d329fb42 Merge pull request #423 from okriuchykhin/ok_SCI_896 
Make search work for full names in smart annotations [SCI-896]
 2017-01-18 17:58:52 +01:00
Oleksii Kriuchykhin
6555fd02b6 Make search work for full names in smart annotations [SCI-896] 2017-01-18 16:57:51 +01:00
mz3944
b5e38afb64 Merge pull request #416 from mz3944/mz-sci-884 
Smart annotation bug fixes [SCI-884, SCI-889] [WIP]
 2017-01-18 16:13:19 +01:00
Matej Zrimšek
dbbb709bf2 Smart annotations minor refactoring. [SCI-884, SCI-889] 2017-01-18 16:04:39 +01:00
Matej Zrimšek
24458fe590 Smart annotations filter switching fixed/hacked. [SCI-884, SCI-889] 2017-01-18 15:29:48 +01:00
Mojca Lorber
dde9854bf1 update protocol import/export and clone 2017-01-18 14:22:19 +01:00
Luka Murn
cf72da5635 Merge branch 'improved-files-handling' into 'master' 
Conflicts:
	app/assets/javascripts/protocols/steps.js.erb
	app/helpers/assets_helper.rb
	db/schema.rb
 2017-01-18 11:29:40 +01:00
Oleksii Kriuchykhin
12eb1df69f Remove previous fix for popups [SCI-855] 2017-01-18 10:59:00 +01:00
Zmago Devetak
1b9f7db385 Merge pull request #405 from ZmagoD/zd_SCI_832 
Visualization of User smart annotation after saving the field
 2017-01-18 09:36:42 +01:00
Matej Zrimšek
d3c33c9dca Refactored smart annotation JS. [SCI-884] 2017-01-17 10:05:41 +01:00
Luka Murn
a2935c6620 Add sample info modal popup to sample smart annotations 
This MR also loads datatables.js globally (as it's required by
the modal), so I removed it everywhere in code, and it shouldn't
be used anymore (e.g. '//= require datatables').

Closes SCI-892.
 2017-01-16 15:52:02 +01:00
Matej Zrimšek
2877126dc6 Fixed selected search filter button style. [SCI-884] 2017-01-16 12:52:03 +01:00
mlorb
88cc87d168 Merge pull request #408 from mlorb/ml-sci-847-v2 
Adjust columns width in samples table header after selecting sample group [SCI-847]
 2017-01-16 10:52:00 +01:00
Mojca Lorber
9f1a49847e fix table header again 2017-01-13 18:54:43 +01:00
Matej Zrimšek
15d7944302 Preventing splitting of the words in the lookup query for # smart annotations. Query on the # is now performed on every character input, before it sometimes just filtered out the old (results count limited) query. Some refactoring of samrt annotations JS. [SCI-884, SCI-889] 2017-01-13 18:51:05 +01:00
Mojca Lorber
5f7e0b2227 adjust columns width in samples table header after selecting sample group 2017-01-13 15:59:47 +01:00
Oleksii Kriuchykhin
a190ef36ff Extend comment to make more clear [SCI-855] 2017-01-13 12:43:43 +01:00
zmagod
1b2fa78e42 adds user preview to user smart annotation [fixes SCI-832] 2017-01-13 11:34:10 +01:00
Oleksii Kriuchykhin
097209bd9d Fix compatibility of fixed samples table header and modal-tooltip [SCI-855] 2017-01-13 11:34:05 +01:00
zmagod
1840fdb7e5 cleanup js 2017-01-12 09:52:29 +01:00
zmagod
3a1ec0eb5e refactor [fixes SCI-834] [fixes SCI-837] [fixes SCI-823] [fixes SCI-835] [fixes SCI-836] [fixes SCI-824] 2017-01-11 14:56:47 +01:00
okriuchykhin
8d4b2d7373 Merge pull request #399 from okriuchykhin/ok_SCI_811_v2 
Fix changed sample type and sample group in sample edit [SCI-811]
 2017-01-11 11:37:38 +01:00
mlorb
b898c792c4 Merge pull request #395 from mlorb/ml_sci_847 
Adjust columns width in table header after selecting sample type/group [SCI-847]
 2017-01-11 10:43:12 +01:00
zmagod
a4aa933151 refactor smart annotation parser helper 2017-01-11 10:34:14 +01:00
zmagod
a903772de8 style dropdown 2017-01-10 17:05:32 +01:00
Oleksii Kriuchykhin
a3d9e25feb Fix changed sample type and sample group in sample edit [SCI-811] 2017-01-10 16:51:51 +01:00
zmagod
fc76a4ae6d Merge branch 'smart-annotations' of https://github.com/biosistemika/scinote-web into zd_SCI_834 2017-01-10 14:22:04 +01:00
zmagod
89e8946a47 expand smart annotation 2017-01-10 14:14:21 +01:00
zmagod
e0e998a0d8 add smart annotation parser helper 2017-01-10 14:14:21 +01:00
zmagod
6efcf49927 working version of dropdown filter 2017-01-10 14:14:21 +01:00
zmagod
53d20df449 added xregexp 2017-01-10 14:14:21 +01:00
zmagod
94262b56ef prepare data for atwho 2017-01-10 14:14:21 +01:00
Luka Murn
0cf5afa499 Merge pull request #376 from Ducz0r/lm-sci-813-fix 
Fix search on hidden columns in samples table [SCI-813]
 2017-01-10 11:27:56 +01:00
Luka Murn
05be1e862f Update filter after toggling visibility (if neccesary) 2017-01-10 11:26:12 +01:00
okriuchykhin
f8237e025a Merge pull request #394 from okriuchykhin/ok_SCI_853 
Fix non removable error messages in samples [SCI-853]
 2017-01-10 11:00:01 +01:00
Oleksii Kriuchykhin
4c9c9037ed Enable image preview after editing protocol and disable preview modal animation [SCI-868] 2017-01-09 17:19:46 +01:00
Mojca Lorber
a0a7f35d44 adjust columns width in table header after selecting sample type/group 2017-01-09 15:00:07 +01:00
Oleksii Kriuchykhin
773b00933a Improve multiple messages handling in samples [SCI-853] 2017-01-09 13:55:50 +01:00
Oleksii Kriuchykhin
0fd7688427 Fix hiding of error messages in the samples datatable [SCI-853] 2017-01-09 13:34:23 +01:00
okriuchykhin
3f930ccfce Merge pull request #392 from okriuchykhin/ok_SCI_858 
Fixes wrong samples info modals being shown in samples datatable [SCI-858]
 2017-01-09 12:49:38 +01:00
mz3944
54ef2be94b Merge pull request #383 from mz3944/mz-sci-845 
Fixed samples table all rows un/checking. [SCI-845]
 2017-01-09 11:58:44 +01:00
mlorb
006db01b11 Merge pull request #390 from mlorb/ml_sci_850 
Fix samples info popup error [SCI-850]
 2017-01-09 11:38:50 +01:00
Oleksii Kriuchykhin
bc8db28746 Fixes wrong samples info modals being shown in samples datatable [SCI-858] 2017-01-09 09:38:42 +01:00
Luka Murn
0ee5b98977 Refactor code a bit, add dismiss button to header 2017-01-07 09:59:52 +01:00
Matej Zrimšek
72df48500d Fixed samples table all rows un/checking. [SCI-845] 2017-01-06 18:19:20 +01:00
Mojca Lorber
6f7c08fa63 fix samples info popup error 2017-01-06 17:31:17 +01:00
Oleksii Kriuchykhin
89710d8782 Enable image preview for newly uploaded images [SCI-694] 2017-01-06 16:41:24 +01:00
Oleksii Kriuchykhin
aa2b573278 Enable image preview while editing steps and code style improvements [SCI-694] 2017-01-06 15:58:23 +01:00
Luka Murn
7835753d3c Add atwho-users URL to <body> 2017-01-06 12:48:37 +01:00
Mojca Lorber
4e7e261225 fix protocol preview 2017-01-06 10:10:33 +01:00
Mojca Lorber
356edba1b3 add protocol preview to search results 2017-01-05 18:08:59 +01:00
Luka Murn
b614ce714b Restyle atwho dropdown 2017-01-05 14:06:48 +01:00
Luka Murn
a78bb79618 Temp commit 2017-01-05 12:07:17 +01:00
Luka Murn
eb64162633 Remove Gem dependency, add atwho as regular vendor/js 2017-01-05 12:06:59 +01:00
Luka Murn
09ef3b3ad5 Merge pull request #378 from Ducz0r/lm-sci-802-fix 
Add tooltips to samples column dropdown [SCI-802]
 2017-01-04 11:30:04 +01:00
Luka Murn
2c5b27ce81 Change "Update" to "Save" 
Closes SCI-802.
 2017-01-04 11:29:34 +01:00
mlorb
59751ec41e Merge pull request #373 from mlorb/ml_sci_709 
Add Protocol Preview to Protocol repository [SCI-709]
 2017-01-04 11:28:55 +01:00
Luka Murn
3bee9d2e12 Save an (yet unworking) version of user smart annotations 
Used so other devs can start working on smart annotations.
 2017-01-04 10:54:02 +01:00
Luka Murn
23e60e0d01 Add Gems for smart annotations (atwho) 2017-01-04 10:51:55 +01:00
Luka Murn
6402acc102 Merge pull request #377 from Ducz0r/lm-sci-820-fix 
Fix 2 bugs with comments editing [SCI-820]
 2017-01-04 10:47:29 +01:00
Luka Murn
37cd6417c8 Merge pull request #374 from Ducz0r/lm-sci-808-814-fix 
Fix some bugs on sample groups & types page [SCI-808, SCI-814]
 2017-01-04 09:50:26 +01:00
Mojca Lorber
a0704cd873 remove duplicated includes of css and js 2017-01-03 17:33:01 +01:00
zmagod
a434649f42 Merge branch 'master' of https://github.com/biosistemika/scinote-web into office_integration 2017-01-03 16:35:25 +01:00
Mojca Lorber
c476faca30 fix hound 2017-01-03 11:04:09 +01:00
Mojca Lorber
e555535dfb add edit button to protocol preview modal 2017-01-03 10:04:14 +01:00
Oleksii Kriuchykhin
0d01a4b2bd Remove unneeded function from utils.js [SCI-819] 2016-12-30 15:50:43 +01:00
Oleksii Kriuchykhin
4065be9e4e Fix marking of selected option [SCI-819] 2016-12-30 15:50:43 +01:00
Oleksii Kriuchykhin
e22ff6f8bb Fix an issue with sample editing and type/group dropdowns [SCI-819] 2016-12-30 15:50:43 +01:00
okriuchykhin
2474eac37d Merge pull request #367 from okriuchykhin/ok_SCI_818 
Fix sample info popup [SCI-818]
 2016-12-30 15:43:28 +01:00
okriuchykhin
e826791429 Merge pull request #365 from okriuchykhin/ok_SCI_807 
Fix buttons disappear when deleting columns in samples [SCI-807]
 2016-12-30 15:43:13 +01:00
okriuchykhin
73478d7b5e Merge pull request #372 from okriuchykhin/ok_SCI_816 
Fix flash message display in samples table [SCI-816]
 2016-12-30 15:30:14 +01:00
Oleksii Kriuchykhin
e156dbc987 Implement flash message hiding through module pattern [SCI-816] 2016-12-28 14:52:03 +01:00
Luka Murn
2304742d87 Add tooltips to samples column dropdown 
Closes SCI-802.
 2016-12-27 08:45:23 +01:00
Luka Murn
b931b20f02 Fix 2 bugs with comments editing 
Closes SCI-820.
 2016-12-23 20:41:23 +01:00
Luka Murn
fbc2be890c Fix search on hidden columns in samples table 
Closes SCI-813.
 2016-12-23 19:56:54 +01:00
Luka Murn
87d8fece46 Fix bug on edit/cancel sample group page 
Closes SCI-814.
 2016-12-23 12:50:49 +01:00
mlorb
876ce37a96 Merge pull request #366 from mlorb/ml-sci-284 
Samples - freeze header row and edit button... [SCI-284]
 2016-12-23 12:29:41 +01:00
Mojca Lorber
40e3240a99 add content to preview modal 2016-12-22 11:43:11 +01:00
Luka Murn
5beaa26224 Update utils.js 
Closes SCI-811.
 2016-12-22 10:03:00 +01:00
Oleksii Kriuchykhin
ee5e0ad455 Fix flash message display in samples table [SCI-816] 2016-12-21 17:26:33 +01:00
Luka Murn
af6bf2aee1 Fix jQuery selector, make it work for new samples 2016-12-21 16:23:09 +01:00
Luka Murn
e52277bdad Fix sample types & groups when editing sample in samples table 
Closes SCI-811.
 2016-12-21 13:15:55 +01:00
Oleksii Kriuchykhin
034976a709 Fix sample info popup [SCI-818] 2016-12-20 17:21:17 +01:00
Oleksii Kriuchykhin
00ea3a027c Fix generation of preview url for new steps and results [SCI-694] 2016-12-20 16:10:53 +01:00
Oleksii Kriuchykhin
cbef971d85 Fix timeouts when fetching images from S3 [SCI-694] 2016-12-20 15:36:07 +01:00
Mojca Lorber
ba0214d1ff staying on same page after saving a sample; fix button disappearance when adding new column 2016-12-20 15:19:31 +01:00
Mojca Lorber
165ec6144c adjust columns width in table header when editing or adding new sample; and fix horizontal scrolling 2016-12-20 13:41:19 +01:00
Oleksii Kriuchykhin
42f71f4da8 Fix buttons disappear when deleting columns in samples datatable [SCI-807] 2016-12-20 09:49:21 +01:00
Oleksii Kriuchykhin
d2b76d8385 Improved image preview modal [SCI-694] 2016-12-19 17:36:18 +01:00
Mojca Lorber
d1e2354f4e add scrolling functionality and remove bug with adding new column 2016-12-19 16:59:09 +01:00
zmagod
6f7f6a8b7f removes dropdown sorting [fixes SCI-811] 2016-12-19 16:41:14 +01:00
zmagod
efe41817f2 removes sample group/type link in new sample form [fixes SCI-809] 2016-12-19 10:49:21 +01:00
Oleksii Kriuchykhin
b537feb8a0 Added large preview [SCI-694] 2016-12-16 17:07:08 +01:00
Oleksii Kriuchykhin
0541253ffa Added modal for images preview [SCI-694] 2016-12-16 15:53:16 +01:00
Zmago Devetak
90a115fff3 Merge pull request #342 from ZmagoD/zd_SCI_758 
Generate png preview images for uploaded TIFF images
 2016-12-16 15:39:07 +01:00
Zmago Devetak
c8631077df Merge pull request #361 from biosistemika/improved-sample-table 
Improved sample table
 2016-12-16 15:37:54 +01:00
Zmago Devetak
c9d38a5454 Merge pull request #359 from ZmagoD/zd_SCI_804 
disables sorting and columns dropdown when editing or adding new samp…
 2016-12-16 12:56:11 +01:00
Zmago Devetak
601594fdb9 Merge pull request #355 from ZmagoD/zd_fix_mozilla_compatibility_issue 
fixes compatibility issue on mozilla firefox
 2016-12-16 11:57:18 +01:00
Zmago Devetak
b35744d18e Merge pull request #360 from ZmagoD/zd_update_gemfile 
updated gemfile
 2016-12-16 11:53:05 +01:00
zmagod
897e34a23b reinitialize highlight.js after ajax call 2016-12-16 11:44:42 +01:00
zmagod
b87246c8c2 cleanup spinner after edit step 2016-12-16 11:10:03 +01:00
Zmago Devetak
ad9b25ba44 Merge pull request #356 from ZmagoD/zd_SCI_803 
fixes bug with long column names in edit mode [fixes SCI-803]
 2016-12-16 11:02:42 +01:00
Zmago Devetak
3d500800cd Merge pull request #358 from ZmagoD/zd_SCI_805_801 
removes error message from new type/group form [fixes SCI-805]
 2016-12-16 10:54:23 +01:00
zmagod
25671c744a disables sorting and columns dropdown when editing or adding new sampe [fixes SCI-804] 2016-12-16 09:50:45 +01:00
zmagod
fffa0d91da removes error message from new type/group form [fixes SCI-805] 2016-12-15 16:17:34 +01:00
zmagod
7c88f3e0aa fixed empty name error 2016-12-15 15:50:07 +01:00
zmagod
6755ebcbf8 fixes bug with long column names in edit mode [fixes SCI-803] 2016-12-15 15:26:51 +01:00
Zmago Devetak
daee14bed5 Merge pull request #343 from ZmagoD/zd_SCI_780 
fixed step description links [fixes SCI-780]
 2016-12-15 13:12:25 +01:00
zmagod
dc6e9dcbd8 fixes compatibility issue on mozilla firefox 2016-12-15 11:57:17 +01:00
Mojca Lorber
69d164da68 add new column on first position 2016-12-15 11:20:40 +01:00
zmagod
9083f84396 Merge branch 'improved-sample-table' of https://github.com/biosistemika/scinote-web into zd_SCI_789 2016-12-15 11:03:19 +01:00
zmagod
3e31f114d4 app/assets/javascripts/samples/sample_datatable.js 2016-12-15 10:51:17 +01:00
zmagod
b164886270 fixed error mesage scroll 2016-12-15 10:44:23 +01:00
zmagod
b003d192c3 fixed edit mode 2016-12-15 09:54:38 +01:00
zmagod
ba58ac2a77 Merge branch 'improved-sample-table' of https://github.com/biosistemika/scinote-web into zd_SCI_781_796 2016-12-15 09:26:12 +01:00
zmagod
54fee339f8 cleanup unneeded code 2016-12-15 09:23:38 +01:00
zmagod
4d6a85ed7c fixed sample groups colorpicker [fixes SCI-781] 2016-12-15 09:23:38 +01:00
zmagod
b07f9fae59 fixes new sample group/type link in sample row [fixes SCI-796] 2016-12-15 09:23:38 +01:00
zmagod
6d2fb3b02c Merge branch 'improved-sample-table' of https://github.com/biosistemika/scinote-web into zd_SCI_790 2016-12-14 17:05:00 +01:00
zmagod
dfd472d37d fixed column name after edit 2016-12-14 16:47:39 +01:00
zmagod
a9f8239516 fixed edit action 2016-12-14 16:37:44 +01:00
okriuchykhin
c4ff12be51 Merge pull request #349 from okriuchykhin/ok_SCI_783 
Fix columns ordering when deleting custom fields [SCI-783]
 2016-12-14 16:19:20 +01:00
Oleksii Kriuchykhin
fa1cf1f04d Better handling of columns deleting with fixing columns ordering [SCI-783] 2016-12-14 15:23:00 +01:00
zmagod
50c9dd3f59 fixed typo 2016-12-14 14:40:56 +01:00
okriuchykhin
2fd7536039 Merge pull request #352 from okriuchykhin/ok_SCI_793 
Hide dropdown when user interacts with samples table [SCI-793]
 2016-12-14 14:19:38 +01:00
okriuchykhin
6381166eb1 Merge pull request #346 from okriuchykhin/ok_SCI_788 
Preserve scroll position in the samples columns dropdown when reordering [SCI-788]
 2016-12-14 14:19:15 +01:00
Zmago Devetak
ef4ae1abcb Merge pull request #348 from ZmagoD/zd_SCI_785 
fixes samples table dropdown edit mode [fixes SCI-785]
 2016-12-14 13:37:09 +01:00
zmagod
1ff98bb6df adds tooltip to samples dropdown and column names 2016-12-14 13:36:10 +01:00
Oleksii Kriuchykhin
9f439cf183 Hide dropdown when user interacts with samples table [SCI-793] 2016-12-13 17:25:01 +01:00
zmagod
d9971b4502 adds error message in samples table dropdown [fixes SCI-789] 2016-12-13 17:08:19 +01:00
Oleksii Kriuchykhin
e414af2fc3 Fix columns ordering when deleting custom fields [SCI-783] 2016-12-13 16:21:17 +01:00
zmagod
fa19bf1de7 fixes samples table dropdown edit mode [fixes SCI-785] 2016-12-13 15:43:31 +01:00
zmagod
2426539715 fixes long names in columns dropdown [fixes SCI-784] 2016-12-13 14:54:37 +01:00
zmagod
c960230bf0 fixes dropdown height bug [fixes SCI-787] 2016-12-13 11:35:50 +01:00
Oleksii Kriuchykhin
de12fac767 Preserve scroll position in the samples coluns dropdown when reordering [SCI_788] 2016-12-13 11:25:35 +01:00
Mojca Lorber
2cfcba0ceb add protocol preview modal 2016-12-13 10:39:18 +01:00
Zmago Devetak
d54007f69c Merge pull request #337 from ZmagoD/zd_SCI_740 
limits max size of all uploaded files at the one time
 2016-12-13 09:04:14 +01:00
zmagod
b56913cc87 refactor 2016-12-12 16:21:38 +01:00
zmagod
8dd8a7e7cd Merge branch 'improved-sample-table' of https://github.com/biosistemika/scinote-web into zd_improved_samples_table_SCI_774_775_778_777 2016-12-12 15:52:25 +01:00
zmagod
5176f8b459 clean unneeded code [fixes SCI-778] refactor js 2016-12-12 15:40:13 +01:00
Luka Murn
d30a9780f4 Merge branch 'lm-sci-711-fix' of https://github.com/Ducz0r/scinote-web into Ducz0r-lm-sci-711-fix 
Conflicts:
	app/assets/javascripts/samples/sample_datatable.js
 2016-12-12 09:57:37 +01:00
okriuchykhin
420daf3a6a Merge pull request #344 from okriuchykhin/ok_SCI_779 
Fix adding new samples columns [SCI-779]
 2016-12-12 09:29:27 +01:00
Oleksii Kriuchykhin
435a8d20bb Fix columns visability and reordering bug [SCI-779] 2016-12-09 17:37:22 +01:00
Matej Zrimšek
54de13de82 Upon redirection when clicking the new sample type or group link, you're automatically in adding mode. [Fixes SCI-701] 2016-12-09 17:22:09 +01:00
Matej Zrimšek
0b12c87b09 Restyled new sample type and group dropdown links. Some minor refactoring of related code and docs. [Fixes SCI-701] 2016-12-09 16:44:50 +01:00
Oleksii Kriuchykhin
460ca067a2 Fix adding new samples columns [SCI-779] 2016-12-09 16:07:41 +01:00
zmagod
e23be6cc0e fixed step description links [fixes SCI-780] 2016-12-09 15:26:41 +01:00
Oleksii Kriuchykhin
274fd63a41 Initial code commit [SCI-779] 2016-12-09 15:21:26 +01:00
zmagod
8b0dab624d clear unneeded css, change processing image [fixes SCI-758] 2016-12-09 14:24:20 +01:00
zmagod
de3099e4d1 removes asset_helper, fixes loading of processed thumbnails in results and steps and when loading protocols from repository 2016-12-09 13:59:49 +01:00
Luka Murn
8a55ef29e4 Remove unused code 
Closes SCI-711.
 2016-12-09 13:49:19 +01:00
Luka Murn
1a8b141b95 Add delete custom field functionality 2016-12-09 13:49:19 +01:00
Luka Murn
7e32c13d27 Fix edit & delete functionality so it works with draggable 2016-12-09 13:18:59 +01:00
Luka Murn
754c90b612 Edit functionality now works 2016-12-09 13:18:59 +01:00
Luka Murn
54ebdbb06c Update edit mode JS & CSS 2016-12-09 13:18:59 +01:00
Luka Murn
da630ac2cb Make edit, delete buttons clickable & hide them if neccesary 2016-12-09 13:18:59 +01:00
Matej Zrimšek
aea679ec11 Added links for creating new sample type and group when creating new sample. [fixes SCI-701] 2016-12-09 11:39:12 +01:00
Mojca Lorber
0e3526c9ad Merge branch 'mlorb-ml-sci-696' into improved-sample-table 
Conflicts:
	app/assets/javascripts/samples/sample_datatable.js
 2016-12-08 15:44:50 +01:00
Mojca Lorber
1b2a438ed4 remove fixed columns 2016-12-08 15:24:54 +01:00
zmagod
40fdfef67f setup delayed_paperclip gem 2016-12-08 15:24:14 +01:00
Mojca Lorber
7d88e247fc refactoring 2016-12-08 14:41:35 +01:00
zmagod
ac52e643be cleanup direct upload 2016-12-08 11:26:13 +01:00
Mojca Lorber
5b5342de6f make first column fixed 2016-12-07 15:02:18 +01:00
zmagod
9f1e436623 limits max size of all uploaded files at the one time [fixes SCI-740] 2016-12-07 09:02:04 +01:00
okriuchykhin
cb2abfa7a9 Merge pull request #325 from okriuchykhin/ok_SCI_712 
Added form for adding new columns to samples table into dropdown [SCI-712]
 2016-12-06 15:00:01 +01:00
Zmago Devetak
49f9e64171 Merge pull request #333 from ZmagoD/zd_SCI_700 
Managing sample groups tab
 2016-12-06 14:51:09 +01:00
zmagod
8ca7151df4 added constant to load_from_file_size_error local 2016-12-06 13:52:07 +01:00
Oleksii Kriuchykhin
e02d780e44 Added Enter key handling and fixed error reporting [SCI-712] 2016-12-06 13:22:26 +01:00
Oleksii Kriuchykhin
da7e86c7c2 Fix save/delete buttons after updating datatable and added permissions check [SCI-712] 2016-12-06 13:22:26 +01:00
Oleksii Kriuchykhin
f6dd64772a Add columns to samples table without page reload [SCI-712] 2016-12-06 13:22:26 +01:00
Oleksii Kriuchykhin
40db8310fd Move code to sample_datatable.js and removed unused modal [SCI-712] 2016-12-06 13:22:26 +01:00
Oleksii Kriuchykhin
22dabd2177 Added form for adding new columns to samples table into dropdown [SCI-712] 2016-12-06 13:17:05 +01:00
Oleksii Kriuchykhin
94866e8994 Initial code commit for samples columns dropdown [SCI-712] 2016-12-06 13:16:05 +01:00
Mojca Lorber
1bc0ca9e75 fix bug with first time load 2016-12-06 13:14:29 +01:00
zmagod
787b8b1600 fixed new sample type/group form 2016-12-06 12:01:02 +01:00
Mojca Lorber
12088ebfd3 add visibility functionality after refresh 2016-12-06 09:40:28 +01:00
Mojca Lorber
849f78b4df implement reordering of columns in the samples table and change from local to database storage 2016-12-05 11:34:36 +01:00
zmagod
ef2471d3f7 fixes inport eln error message and spinner [fixes SCI-752] 2016-12-05 10:44:58 +01:00
zmagod
7725374c42 refactor sample types/groups [fixes SCI-700] 2016-12-02 09:58:35 +01:00
zmagod
83aae59eed adds sample groups index page 2016-12-02 09:33:09 +01:00
Zmago Devetak
33adb58950 Merge pull request #328 from ZmagoD/zd_SCI_699 
Managing sample types tab
 2016-11-30 16:14:13 +01:00
Oleksii Kriuchykhin
f51f33ec25 Added sorting functionality to samples colunmns dropdown [SCI-695] 2016-11-30 11:42:05 +01:00
zmagod
a2e13441e5 removes create_sample_type modal and related js actions 2016-11-30 09:02:34 +01:00
zmagod
4e4a48620c adds validation to input fields 2016-11-29 18:08:29 +01:00
zmagod
12848f15fa adds sample_type index view with all crud actions 2016-11-29 17:15:54 +01:00
Zmago Devetak
1e870a6e7c Merge pull request #320 from ZmagoD/zd_SCI_698 
adds new samples columns dropdown [fixes SCI-698]
 2016-11-28 16:30:16 +01:00
zmagod
72d1dfb15e cleanup sample_datatable.js 2016-11-28 16:28:22 +01:00
zmagod
9d91d2ce28 adds new samples columns dropdown [fixes SCI-698] 2016-11-25 17:29:30 +01:00
Luka Murn
b1b095910c Merge pull request #309 from Ducz0r/lm-remove-unused-files 
Brace for impact...
 2016-11-25 10:00:29 +01:00
Matej Zrimšek
1db926101d Minor refactoring. 2016-11-23 10:48:43 +01:00
Matej Zrimšek
6bc2603157 Fixed tutorial overlay unexpectedly blurring the screen when not running the tutorial. [fixes SCI-707] 2016-11-23 10:36:09 +01:00
Zmago Devetak
0f3db56a74 Merge pull request #311 from ZmagoD/zd_SCI_716 
load comments after edit step [fixes SCI-716]
 2016-11-23 09:14:57 +01:00
zmagod
8d7285ce7c load comments after edit step [fixes SCI-716] 2016-11-22 14:39:08 +01:00
Oleksii Kriuchykhin
d7aa155860 Disable keyboard navigation in tutorial [SCI-703] 2016-11-22 14:14:42 +01:00
Oleksii Kriuchykhin
be59b85d3b Added additional checks for tutorial steps [SCI-703] 2016-11-22 13:55:23 +01:00
Oleksii Kriuchykhin
cc86ff268f Reload page after exit from tutorial [SCI-703] 2016-11-22 13:49:57 +01:00
mz3944
c5bc3a4dc6 Merge pull request #303 from mz3944/mz_and_new_tutorial_steps_SCI_571_v2 
Added additional tutorial step for showing protocol link. Tutorial st…
 2016-11-21 16:06:45 +01:00
Oleksii Kriuchykhin
d6f5f6b9bf Changes default behaviour for absolute urls in Quill [SCI-684] 2016-11-21 14:18:08 +01:00
Luka Murn
f5795f5516 Remove unused assets & helpers 2016-11-18 11:30:03 +01:00
Matej Zrimšek
f13cc5be0e Added additional tutorial step for showing protocol link. Tutorial steps 1-3 are now completelly handled in JS and not in HTML (preferred way). 2016-11-17 18:03:49 +01:00
Luka Murn
26d04b1f3c Merge branch 'rich-text-formatting' into 'master' 
Conflicts:
	Gemfile.lock
	app/assets/stylesheets/themes/scinote.scss
 2016-11-17 16:39:33 +01:00
Luka Murn
9d3685f872 Merge branch 'gamification' into 'master' 
Conflicts:
	app/controllers/users/invitations_controller.rb
	app/controllers/users/settings_controller.rb
 2016-11-17 16:30:18 +01:00
Matej Zrimšek
c8eb82cc85 Fixed tutorial step numbers and changed getting next page reference on protocols page. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
92d990a715 Code for tutorial function steps parameter reformatted. Deleted Git merging line. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
0e97bfc002 Refactored and added back button for tutorial for steps 21-22. Minor tutorial function renaming and docs update. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
c64146904a Refactored and added back button for tutorial for steps 19-20. Updated tutorial steps count. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
47c1308ba6 Refactored and added back button for tutorial for step 18. Tutorial function now also works with one page step. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
00ed91e856 Refactored and added back button for tutorial for steps 16-17. Tutorial now exits upon page leave. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
bfe7c19f93 Refactored and added back button for tutorial for steps 14-15. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
4ee7baabec Enriched tutorial function description. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
33c96c9eee Refactored and added back button for tutorial for steps 12-13. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
0687153eb8 Minor tutorial refactoring. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
f4206ea3d0 No warning popup is shown when running tutorial. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
3f8d3d5939 Refactored and added back button for tutorial for steps 6-11. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
74e58b044f Tutorial refactored using one method, for steps 1-5. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
0d133ff32e Refactoring and added back buttons for tutorial steps 1-5. 2016-11-17 14:46:04 +01:00
Luka Murn
d1701bd7ae Merge pull request #276 from Ducz0r/lm-sci-637 
Automatically resize textarea elements [SCI-637]
 2016-11-17 09:58:36 +01:00
Luka Murn
a3bbf94643 Add a smart_text_area tag & implement it throughout application 
This fixes the mentioned issues @mlorb mentioned.
Closes SCI-637.
 2016-11-16 17:57:01 +01:00
Oleksii Kriuchykhin
d2e29935cf Improved tutorial styling [SCI-685] 2016-11-16 15:44:06 +01:00
okriuchykhin
43b85ac5c2 Merge pull request #293 from okriuchykhin/ok_SCI_670 
Fix project canvas interactivity in the tutorial [SCI-670]
 2016-11-16 11:32:13 +01:00
Luka Murn
83160a487b Fix importer so it supports rendering & importing rich text format 
Closes SCI-674.
 2016-11-15 16:57:53 +01:00
Oleksii Kriuchykhin
410837e6cf Fix project canvas interactivity in the tutorial [SCI-670] 2016-11-15 16:53:20 +01:00
Luka Murn
263244ad83 Reload whole page after user is invited from team invite users modal 
Closes SCI-664.
 2016-11-15 16:21:32 +01:00
mlorb
b0b2484fdf Merge pull request #279 from mlorb/ml_sci_638_vol2 
Fix validation problems for rich text fields [SCI-638]
 2016-11-11 12:37:02 +01:00
Mojca Lorber
4d681bb63c change strip html function 2016-11-11 12:34:57 +01:00
zmagod
59f7bdb54e hide flash after 5 sec [fixes SCI-660] 2016-11-11 12:30:48 +01:00
Mojca Lorber
3b7af3e66c fix validation logic 2016-11-11 11:42:16 +01:00
Oleksii Kriuchykhin
b9f982ead7 Additional steps added to tutorial and numbering of the steps fixed [SCI-571] 2016-11-11 10:07:34 +01:00
Oleksii Kriuchykhin
d2491a18a4 Tutorial Save Protocol step added [SCI-571] 2016-11-11 10:06:18 +01:00
Luka Murn
b42922d32c Add autosize functionality to all textareas 
Closes SCI-637
 2016-11-11 09:09:41 +01:00
Luka Murn
55f9633d1d Add jQuery.autosize plugin 2016-11-11 09:09:41 +01:00
Luka Murn
acd8ce8932 Merge pull request #270 from Ducz0r/lm-sci-644 
Convert all large text input fields into text areas (10000 characters)
 2016-11-11 09:07:25 +01:00
Luka Murn
0e065026bd Closes SCI-648 2016-11-10 16:18:17 +01:00
Mojca Lorber
ab0879e8d6 Integrate library with default settings 2016-11-09 13:09:53 +01:00
Luka Murn
b246853117 Code styling (use link_to, %w) 2016-11-08 16:43:25 +01:00
Luka Murn
55d8fea359 Make all comment edit fields textareas 2016-11-08 11:29:55 +01:00
Luka Murn
0ab62576a2 Add new modal to organization page, remove old modal code 2016-11-07 09:43:10 +01:00
Luka Murn
6fe0d6b3df A working invite modal! 2016-11-07 09:43:10 +01:00
Luka Murn
ccf8932611 Add first version of invite users modal 2016-11-07 09:43:09 +01:00
Luka Murn
b4685b0a40 Remove console.log() 2016-10-25 18:13:29 +02:00
Luka Murn
cd360d7279 Fix the save report alert() bug 
Closes SCI-616
 2016-10-25 18:12:29 +02:00
Zmago Devetak
12c77df883 Merge pull request #237 from ZmagoD/zd_SCI_593_v2 
Styled global team switch and search [fixes SCI-593]
 2016-10-21 16:28:50 +02:00
zmagod
49d3879642 fixes padding on mobile, added separator on team switch dropdown, focus search input 2016-10-21 11:46:59 +02:00
okriuchykhin
f876ade05e Merge pull request #236 from okriuchykhin/ok_SCI_557 
Fixes issue with new comments and date separator SCI-557
 2016-10-21 10:29:46 +02:00
Zmago Devetak
f615b3da41 Merge pull request #230 from ZmagoD/zd_SCI_586 
Adds new team button to team switch dropdown [fixes SCI-586]
 2016-10-21 08:29:05 +02:00
Oleksii Kriuchykhin
0c1ff06f21 Fixes issue with new comments and date separator SCI-557 2016-10-20 22:33:15 +02:00
mlorb
fa4f3fb0a0 Merge pull request #220 from mlorb/ml_sci_462 
fix multiplication of edit comment fields [SCI-462]
 2016-10-20 15:14:31 +02:00
Oleksii Kriuchykhin
347216183f Fixes different color of buttons in notifications settings [SCI-590] 2016-10-20 14:17:07 +02:00
zmagod
f21c9e394f adds new team button to team switch dropdown [fixes SCI-586] 2016-10-20 13:47:41 +02:00
Luka Murn
640a575a3a Merge pull request #222 from biosistemika/modular-tasks 
Merge global team switch into master
 2016-10-18 11:39:09 +02:00
zmagod
557957c857 fixed issue with mozilla browsers 2016-10-17 15:21:19 +02:00
zmagod
d86a4dd311 setup global team switch view and controller action 2016-10-17 15:10:26 +02:00
Oleksii Kriuchykhin
0ec7c019b3 Fix issue with pop-up windows and turbolinks [SCI-463] 2016-10-17 14:25:54 +02:00
Mojca Lorber
177c4b5918 fix multiplication of edit comment fields 2016-10-17 12:59:51 +02:00
Matej Zrimšek
f2cd9890dd Replaced hardcoded infinity values with constants. Added quotation marks to Ruby string constants in JS. 2016-10-17 11:57:47 +02:00
Matej Zrimšek
a6a2a237aa Removed unneeded ERB tags, which caused error. Minor refactoring. 2016-10-17 11:57:47 +02:00
Matej Zrimšek
ece89da391 Removed ruby constants duplicates in JS, because of caching problems. 2016-10-17 11:57:47 +02:00
Matej Zrimšek
05acf5a725 Replaced all Ruby constants instances in JS to be called from JS. 2016-10-17 11:57:46 +02:00
Matej Zrimšek
0780bd2416 Ruby constants are now automatically available in JS. Refactoring was needed. 2016-10-17 11:57:37 +02:00
Matej Zrimšek
a3dfb59558 Added remaining constants. 2016-10-17 11:30:05 +02:00
Matej Zrimšek
21ec05d541 Refactored searches (user and globals earch) and used constants. 2016-10-17 11:17:59 +02:00
Oleksii Kriuchykhin
c6fb57318f Added use of constants in JS [SCI-530] 2016-10-13 13:06:11 +02:00
Oleksii Kriuchykhin
37cff75013 Fixes issue with comments options menu [SCI-530] 2016-10-13 12:07:41 +02:00
Mojca Lorber
42f6b679f8 Adding system notifications email function in settings 2016-10-12 11:50:26 +02:00
Mojca Lorber
6bea0a9e1a fixes merge conflicts 2016-10-12 10:55:40 +02:00
Mojca Lorber
4f1cbad7da adding update notifications in settings 2016-10-12 10:42:07 +02:00
Zmago Devetak
f25767fdc3 Merge pull request #209 from ZmagoD/zd_SCI_534_remove_popup 
Removed introductory popup [fixes SCI-534]
 2016-10-12 08:13:46 +02:00
Oleksii Kriuchykhin
5399033fce Added user settings for email notifications [SCI-443] 2016-10-11 16:43:17 +02:00
zmagod
42a30576e3 removed introductory popup [fixes SCI-534] 2016-10-11 08:33:50 +02:00
Jure Grabnar
1f67aec258 Prevent destroying protocols when file is edited 
SCI-552 #close
 2016-10-06 16:13:42 +02:00
Luka Murn
5c80c8a817 Add "no notifications" to dropdown & notifications index page 2016-10-05 16:58:21 +02:00
okriuchykhin
50f28fe883 Merge pull request #193 from okriuchykhin/ok_global_notifications-SCI-442 
Global notifications screen [SCI-442]
 2016-10-05 16:01:41 +02:00
Oleksii Kriuchykhin
868ffd03d6 JS code improvement [SCI-442] 2016-10-05 15:51:11 +02:00
Oleksii Kriuchykhin
8907e54b49 Global notifications index page added [SCI-442] 2016-10-05 15:51:11 +02:00
Zmago Devetak
f3708bcac0 Merge pull request #191 from ZmagoD/zd_SCI_469_ver2 
Comments date duplication
 2016-10-05 15:47:42 +02:00
zmagod
b0f6b1f4d0 fixed comments action on project page 2016-10-05 15:39:54 +02:00
Zmago Devetak
eea310514a Merge pull request #194 from ZmagoD/zd_SCI_531_533 
Notification style fixes
 2016-10-05 15:27:36 +02:00
zmagod
bca3d19562 fixed comment options dropdown position 2016-10-05 15:26:11 +02:00
Zmago Devetak
71ad5bf034 Merge pull request #190 from ZmagoD/zd_SCI_529 
Prepare settings screen for notifications
 2016-10-05 14:54:47 +02:00
okriuchykhin
bfa7e57bd8 Merge pull request #168 from okriuchykhin/ok_SCI-463 
Fixes issue with unexpected notification windows [fixes SCI-463]
 2016-10-05 14:45:23 +02:00
zmagod
f9d956bbca fix notifications number on [fixes SCI-531] 2016-10-05 11:50:57 +02:00
zmagod
d90f17d1eb clean comments date duplication [fixes SCI-469] 2016-10-05 08:42:32 +02:00
zmagod
a68e7abc57 first run notification settings 2016-10-04 15:52:48 +02:00
Luka Murn
61cb9651c7 Merge pull request #188 from biosistemika/global-notifications 
Global notifications
 2016-10-04 08:30:50 +02:00
zmagod
c9bbab1004 added html_safe to outputed message, hide notifications number when dropdown is toggled, clear all unseen notification form count when the dropdown is toggled, generate notification only to other users 2016-10-03 20:31:00 +02:00
mlorb
153b692c0c Merge pull request #181 from mlorb/ml_sci_321 
Displaying more information for individual samples in Sample table [SCI-321]
 2016-10-03 16:37:35 +02:00
zmagod
36fb2713b3 start fixing comments dates 2016-10-03 16:10:20 +02:00
Zmago Devetak
91c7d8a952 Merge pull request #176 from ZmagoD/zd_SCI_474 
Unify the comments
 2016-10-03 15:26:17 +02:00
Jure Grabnar
f727289935 Add lock check for editing result 2016-10-03 13:43:35 +02:00
zmagod
77df0bc82c cleans more comment link 2016-10-03 12:34:16 +02:00
Mojca Lorber
093fbd6b8e fixes hound again 2016-10-03 10:40:32 +02:00
Mojca Lorber
2041f2a09d fixes hound 2016-10-03 10:15:46 +02:00
Mojca Lorber
053cd8ed84 removes handler 2016-10-03 10:12:13 +02:00
zmagod
b9bc2f17c8 fixing hound 2016-10-03 08:27:13 +02:00
zmagod
2ee02ec472 mark all seen notifications 2016-10-03 08:20:23 +02:00
Luka Murn
c83342d9f0 Merge pull request #173 from okriuchykhin/ok_SCI-484 
Fix issue with duplicate error messages in experiments modal [SCI-484]
 2016-09-30 08:24:51 +02:00
zmagod
e1a1b93d44 fixed migrations 2016-09-29 14:49:58 +02:00
Mojca Lorber
f4345f3aef fixes hound 2016-09-28 16:09:39 +02:00
Mojca Lorber
efa7a1d7b5 add sample information in pop-up 2016-09-28 15:46:41 +02:00
zmagod
2a86aaf7e4 changed popout content [fixes SCI-520] 2016-09-28 15:12:30 +02:00
zmagod
dad0d3868b fixing hound 2016-09-27 17:31:37 +02:00
zmagod
402a77526a cleaned console.log 2016-09-27 16:22:09 +02:00
zmagod
2235778110 fixed project and task comments + fixed date issue 2016-09-27 16:19:31 +02:00
zmagod
0d322eba13 fixed hound 2016-09-27 11:03:10 +02:00
zmagod
4903cb970c removed comments helper 2016-09-27 10:47:18 +02:00
zmagod
1eb9f772f4 refactor sciNote comments js and unified all comments behavior [fixes SCI-474] 2016-09-27 10:30:48 +02:00
zmagod
1cdfde827f fixes protocol and results comments 2016-09-27 09:26:25 +02:00
zmagod
980ff63104 fixed task comments 2016-09-27 09:18:46 +02:00
zmagod
02bfa1949e fixed project comments 2016-09-27 09:00:02 +02:00
Oleksii Kriuchykhin
8a3a9451e9 Fix issue with duplicate error messages in experiments modal [SCI-484] 2016-09-26 12:58:22 +02:00
Oleksii Kriuchykhin
db1e24202a Minor code cleanup [fixes SCI-463] 2016-09-26 09:08:38 +02:00
Mojca Lorber
c2b742374f adding popup sample info 2016-09-23 17:45:02 +02:00
Oleksii Kriuchykhin
2c144aa2f3 Fix issue with unexpected notification windows appearing after report editor exit [fixes SCI-463] 2016-09-23 11:56:13 +02:00
Zmago Devetak
2b678998d3 Merge pull request #166 from ZmagoD/zd_SCI_471 
fixes load comments [fixes SCI-471]
 2016-09-23 09:17:27 +02:00
zmagod
4f2df691ba add error validations 2016-09-23 08:34:39 +02:00
zmagod
6143b257d0 fixes edit modal [fixes SCI-467] 2016-09-23 08:32:46 +02:00
Matej Zrimšek
0317872bc0 Added check if no comments are present for file result, which caused JS error. 2016-09-22 18:12:35 +02:00
mz3944
cde7f3805f Merge pull request #165 from mz3944/mz_replace_hardcoded_values_with_constants_v2 
Added missing validation for protocol description.
 2016-09-22 17:36:18 +02:00
Matej Zrimšek
13e886f7a9 Removed unneeded upper case for errors which had them, along with their refactoring. [fixes SCI-408] 2016-09-22 17:35:23 +02:00
okriuchykhin
087ee08976 Merge pull request #164 from okriuchykhin/ok_SCI-400 
Fixes issue with new experiment modal and with move of experiments [fixes SCI-400]
 2016-09-22 17:01:58 +02:00
okriuchykhin
729cbef27b Merge pull request #156 from okriuchykhin/ok_SCI-459 
Fixes issue with too many " | " signs in error message [fixes SCI-459]
 2016-09-22 16:12:17 +02:00
zmagod
303cb4308a fixes load comments [fixes SCI-471] 2016-09-22 13:46:27 +02:00
Oleksii Kriuchykhin
b334b037f8 Fixes issue with old data in modal fields [fixes SCI-400] 2016-09-22 10:54:03 +02:00
Matej Zrimšek
c614843044 Minor refactoring with hound alert fixes. 2016-09-21 19:48:18 +02:00
Matej Zrimšek
234918a76d Word wrapping and truncating added to whole application [fixes SCI-458]. Fixed some bugs which were related to long/too long text and validations. Modified parts of application to accomodate for longer text limits. 2016-09-21 19:48:18 +02:00
Matej Zrimšek
c6a23aab98 Added missing validations for text fields. Added text trimming, which removes spaces from beginning and ending of text. [fixes SCI-408] 2016-09-21 19:37:36 +02:00
zmagod
06b1992e94 Merge branch 'zd_SCI_436' of https://github.com/ZmagoD/scinote-web into ZmagoD-zd_SCI_436 2016-09-21 19:20:55 +02:00
zmagod
2bfe8f0636 fixing hound 2016-09-21 08:16:23 +02:00
zmagod
9f56df02d2 removes comment tab and add comment in the info tab [fixes SCI-436] 2016-09-20 18:53:51 +02:00
zmagod
42bbc47f5f first working version 2016-09-20 17:06:07 +02:00
zmagod
0ca65aeca5 fixed step comment sorting 2016-09-20 13:31:50 +02:00
zmagod
cd64e035c0 set form validations 2016-09-20 09:50:03 +02:00
zmagod
f48553e807 fixed ajax call 2016-09-19 16:12:07 +02:00
Oleksii Kriuchykhin
3f0a2c7dfc Fixes issue with too many " | " signs in error message [fixes SCI-459] 2016-09-19 13:53:24 +02:00
Matej Zrimšek
c2f0106993 Replaced hardcoded values with unified constants. Minor refactoring. Also front-end error handling was updated accordingly. [fixes SCI-408] 2016-09-16 15:56:44 +02:00
zmagod
938aa32190 js tweaks 2016-09-16 15:22:24 +02:00
zmagod
635f6b92d6 fixed comments display 2016-09-16 11:55:10 +02:00
zmagod
b9b466cd8e Merge branch 'jg_sci_350_formulas' of https://github.com/jbargu/scinote-web into jbargu-jg_sci_350_formulas 2016-09-16 09:28:19 +02:00
zmagod
e90f0bd3d5 refactor step view 2016-09-16 09:04:21 +02:00
Zmago Devetak
01656c1018 Merge pull request #153 from ZmagoD/zd_SCI_448 
Wrong name of experiment and task - gets undefined as prefix
 2016-09-15 15:00:34 +02:00
mlorb
587369e7a6 Merge pull request #152 from mlorb/ml_sci_428 
fixes responsiveness on mobile phone for sample view [SCI-428]
 2016-09-15 12:11:48 +02:00
zmagod
0a2ab57e28 styled new comments layout 2016-09-15 11:45:51 +02:00
zmagod
e3ae22763e removed comments tab in protocol step 2016-09-15 08:46:14 +02:00
Zmago Devetak
d0a180a1e8 Merge pull request #148 from ZmagoD/zd_SCI_342 
fixes sidebar expanded elements when adding new experiments
 2016-09-14 13:48:34 +02:00
Mojca Lorber
386cedda71 fixes hound again 2016-09-14 11:34:24 +02:00
Mojca Lorber
aba5305cd6 fixes hound 2016-09-14 11:24:19 +02:00
zmagod
c4fabdb67a clean unneeded Observer configurations 2016-09-14 11:16:42 +02:00
zmagod
e1d871dcdb clear undefind from experiment name and refactor sidebar in reports [fixes SCI-448] 2016-09-14 11:11:35 +02:00
Mojca Lorber
a9029e0928 fixes responsiveness on mobile phone for sample view 2016-09-14 11:08:40 +02:00
zmagod
65383f1824 fixes sidebar expanded elements when adding new experiments [fixes SCI-342] 2016-09-13 13:09:57 +02:00
Jure Grabnar
fa3515d2eb Add formulas to reports 2016-09-13 09:46:21 +02:00
Jure Grabnar
3b364be70b Add formulas to steps tables 2016-09-13 09:44:17 +02:00
Jure Grabnar
5c88bdeeae Add formulas for readonly results tables 2016-09-13 09:44:17 +02:00
Jure Grabnar
e096f936f9 Add formulas to results 2016-09-13 09:44:17 +02:00
Matej Zrimšek
af8ab3e081 Fixed step's checklist items editing (items not multiplying and new item insertion always at bottom) [fixes SCI-427]. Improved step/result comment GUI [SCI-446]. 2016-09-12 16:55:46 +02:00
Zmago Devetak
1368716aa0 Merge pull request #130 from ZmagoD/zd_SCI_348 
project overview - updating (or creating new) experiment details
 2016-09-08 12:49:35 +02:00
mlorb
f4029a04fd Merge pull request #142 from mlorb/ml_sci_415 
fixes navbar size when resizing window [SCI-415]
 2016-09-08 12:46:36 +02:00
Matej Zrimšek
6eca3661bf Some JS error refactoring and accordingly updated error rendering when experiment description is too long. 2016-09-08 12:43:31 +02:00
Mojca Lorber
4c66ca6f80 fixes navbar size when resizing window 2016-09-08 09:17:58 +02:00
Matej Zrimšek
b0ad6d0753 Fixed result file deletion and result name updating [fixes SCI-409]. Fixed step name and checklists names and its items names checking, and items removing [fixes SCI-407]. 2016-09-06 23:26:00 +02:00
zmagod
daa144ce7c added missing bracket 2016-09-06 11:57:03 +02:00
zmagod
856d226946 fixed move experiment form error duplication 2016-09-06 11:48:56 +02:00
zmagod
a5a24c7610 clear unused variable 2016-09-06 11:46:28 +02:00
zmagod
b672d85405 fixed error message duplication 2016-09-06 11:46:28 +02:00
zmagod
b44a284b54 sets edit experiment validation 2016-09-06 11:46:28 +02:00
zmagod
9d469f9092 sets front end validation for new experiment modal [fixes SCI-348] 2016-09-06 11:44:03 +02:00
zmagod
de6c03a73b setup experiment modal input validation 2016-09-06 11:44:03 +02:00
Zmago Devetak
9440371f3f Merge pull request #131 from ZmagoD/zd_SCI_400 
Sets front end validation for experiment move action [fixes SCI-400]
 2016-09-06 11:39:38 +02:00
Zmago Devetak
1a19753df9 Merge pull request #128 from ZmagoD/zd_SCI_105 
Trim long words in reports [fixes SCI-105]
 2016-09-06 10:10:06 +02:00
zmagod
a7b6135b2f cleared console.log 2016-09-06 10:08:32 +02:00
Luka Murn
81883911c4 Merge pull request #132 from Ducz0r/lm-sci-228 
Updates to invite users to team modal window
 2016-09-05 15:53:15 +02:00
Luka Murn
1d8600b39f Fix bug when inviting existing users onto teams 
Closes SCI-228
 2016-09-05 14:52:56 +02:00
mz3944
50e0c26e89 Merge pull request #125 from mz3944/mz_removed_avatar_upload_popop_sci_399 
Popup for preventing page leaving when uploading avatar fixed [fixes SCI-399]
 2016-09-05 11:49:04 +02:00
zmagod
667fb67052 sets front end validation for experiment move action [fixes SCI-400] 2016-09-02 16:31:17 +02:00
Zmago Devetak
ea26a532e4 Merge pull request #126 from ZmagoD/zd_SCI_332 
By default all experiments should be collapsed
 2016-09-02 15:58:03 +02:00
zmagod
28fa00c30c trim long words in reports [fixes SCI-105] 2016-09-01 15:45:39 +02:00
zmagod
ac7ac95da8 [fixes SCI-332] 2016-09-01 10:38:20 +02:00
Matej Zrimšek
4fdf478426 Minor refactoring. 2016-08-31 17:57:06 +02:00
Matej Zrimšek
828eebeb16 Popup for preventing page leaving when uploading avatar fixed [fixes SCI-399] 2016-08-31 17:21:17 +02:00
zmagod
55ba2de41f fixes object duplication 2016-08-31 16:34:08 +02:00
zmagod
fabfa83171 introdutory popup cookie 2016-08-31 15:18:21 +02:00
zmagod
e8f971829a added project to session storage 2016-08-31 15:13:17 +02:00
Luka Murn
5cb79f6282 Fix the default parameters in JS 
This was causing major issues in IE.
 2016-08-31 14:04:45 +02:00
zmagod
b05c3df4d3 adds toggle id only to elements with modules 2016-08-31 10:25:40 +02:00
zmagod
21f84bacb6 set sidebar collapsed elements 2016-08-31 08:24:59 +02:00
jbargu
2cd5d85d68 Merge pull request #120 from jbargu/jg_SCI_328_move_experiment_reconnect 
When moving a task, it should connect the source and destination
 2016-08-30 18:01:38 +02:00
mlorb
905acfd43d Merge pull request #109 from mlorb/ml_sci_286 
fixes notification when adding new sample [SCI-286]
 2016-08-30 17:54:45 +02:00
Mojca Lorber
dd8e5d5e12 fixes hound 2016-08-30 17:12:26 +02:00
Mojca Lorber
1b1e6daa21 fixes notification disappearance and error notifications 2016-08-30 16:55:59 +02:00
Jure Grabnar
9a82e7d72b Connect tasks on moving 
SCI-328 #close
 2016-08-30 15:57:27 +02:00
mlorb
8fc29248b3 Merge pull request #119 from mlorb/ml_sci_396 
fixes missing experiment name in side bar [SCI-396]
 2016-08-30 15:05:04 +02:00
Zmago Devetak
11b314fa20 Merge pull request #107 from ZmagoD/zd_bug_fix 
fixes new task button after tutorial ends
 2016-08-30 15:04:11 +02:00
Mojca Lorber
52f228725a fixes hound 2016-08-30 14:04:47 +02:00
Mojca Lorber
aeda6f77d2 fixes missing experiment name in side bar 2016-08-30 13:51:16 +02:00
Luka Murn
c6e575bd2a Merge pull request #115 from Ducz0r/lm-deleting-comments-fix 
Fix for deleting comments
 2016-08-30 13:15:35 +02:00
Luka Murn
77ec5bcff9 Reposition comment dropdowns horizontally if needed 
Closes SCI-258
 2016-08-30 11:39:50 +02:00
Luka Murn
4ee4c6caba Remove JS validator from step comments 2016-08-30 11:06:30 +02:00
zmagod
4b6567e488 fixed workflowimg link 2016-08-30 11:03:33 +02:00
zmagod
6f1c4df942 fixed new task button in canvas 2016-08-30 10:48:28 +02:00
zmagod
57c1707e81 fixes secondary navigation [fixes SCI-338] 2016-08-30 09:53:56 +02:00
zmagod
d33bb50519 disabled secondary navigation in samples tutorial 2016-08-30 08:57:05 +02:00
zmagod
5518d1cd1e fixed 16 step of tutorial 2016-08-30 08:52:44 +02:00
Mojca Lorber
53cdbc2638 fixes notification when adding new sample 2016-08-29 13:45:54 +02:00
zmagod
5af9d10c6a fixes new task button after tutorial ends 2016-08-29 11:46:45 +02:00
zmagod
d886d05ccb Merge branch 'zd_SCI_338' 2016-08-26 16:32:49 +02:00
Matej Zrimšek
e3a7f45fdf Merge branch 'master' into mz_file_upload_and_client_side_upgrade 
Conflicts:
	app/assets/javascripts/application.js
	app/views/results/_result_asset.html.erb
	app/views/steps/_step.html.erb
 2016-08-26 11:13:40 +02:00
Zmago Devetak
0cfc758f43 Merge pull request #102 from ZmagoD/zd_SCI_336 
implement first time popup logic
 2016-08-26 09:19:36 +02:00
zmagod
b0bd92e3f4 fixed edit action 2016-08-26 09:17:55 +02:00
Matej Zrimšek
782d384e26 Spinner now doesn't hide prematurally on file uploading. Some recently introduced bugs quickfixes (report images not showing, locale missplealing, client-side blank tables deletion deleted all tables, error if no asset present in a step). 2016-08-25 22:26:53 +02:00
Matej Zrimšek
04d9163ff6 Paperclip file spoofing corrected/modified. 2016-08-25 18:57:06 +02:00
zmagod
99976722a8 uncomment js file 2016-08-25 18:49:49 +02:00
zmagod
1738ca66d2 one-time introductory popup [fixes SCI-336] 2016-08-25 18:44:21 +02:00
Luka Murn
8018cff02e Merge pull request #103 from Ducz0r/bb_edit_delete_comments 
Edit&delete comments
 2016-08-25 17:18:48 +02:00
mlorb
b1218cb3d6 Merge pull request #59 from biosistemika/ml_sci_244 
fixes tutorial bug of inappropriate window [SCI-244]
 2016-08-25 17:16:45 +02:00
Luka Murn
b533b0aca6 Fix another minor bug 2016-08-25 17:15:53 +02:00
Luka Murn
7cd94e8b0d Fix a minor bug on canvas 2016-08-25 17:09:55 +02:00
Luka Murn
9cd99fc532 Display "no comments" if you delete the last comment 2016-08-25 17:01:30 +02:00
zmagod
7a47ff6bc5 fixed new task error 2016-08-25 15:30:32 +02:00
zmagod
8ff645fb89 disabled experiment dropdown actions 2016-08-25 15:16:51 +02:00
Zmago Devetak
b090fd8d5b Merge pull request #95 from ZmagoD/zd_SCI_374 
adds edit workflow link if no workflow [fixes SCI-374]
 2016-08-25 14:07:33 +02:00
Luka Murn
24dd25d9f5 Add edit/delete result comment functionality 
Lessons learned during this fix:
Don't use dependant: :destroy on both ends of association
between 2 ActiveRecords, or you will run into stack overflow.
 2016-08-25 13:51:31 +02:00
Luka Murn
bac0455435 Add edit&delete functionality to step comments 
This commit also:
* fixes a bug in permission_helper.rb,
* fixes comments.js a bit,
* adds 2 more re-renders of dropdown position calculations to canvas.js and projects/index.js.
 2016-08-25 13:51:31 +02:00
Luka Murn
c92d016f65 Add edit&delete module/task comments functionality 
This required a minor fix of comments.js.
 2016-08-25 13:51:31 +02:00
Luka Murn
f0d9cb96fa Add edit project comments functionality 2016-08-25 13:51:30 +02:00
Luka Murn
15c0baeee8 Add delete project comment functionality 
This commit also removes the old code from @bberic.
 2016-08-25 13:51:30 +02:00
Luka Murn
5569a1e6d2 Revert 2 files that contained no changes 2016-08-25 13:51:30 +02:00
scibb
a76d82d188 delete and edit comments for projects, protocols, results, and workflow elements 2016-08-25 13:51:30 +02:00
zmagod
5fabe06b8d implement first time popup logic 2016-08-25 11:44:49 +02:00
zmagod
f515366d91 fixes workflowing after updating description, fixes canvas bug 2016-08-25 09:11:42 +02:00
zmagod
92bb3dda99 hide last next button 2016-08-25 08:46:11 +02:00
zmagod
dbdbff12eb add experiment level tutorial step [fixes SCI-338] 2016-08-24 19:03:58 +02:00
mlorb
2d90ad1a65 Merge pull request #88 from mlorb/ml_sci_362 
fixes tile size in edit canvas [SCI-362]
 2016-08-24 17:07:11 +02:00
Mojca Lorber
d04df349d5 fixes medium and small zoom 2016-08-24 14:18:12 +02:00
zmagod
9393a96302 adds edit workflow link if no workflow [fixes SCI-374] 2016-08-24 14:10:50 +02:00
Jure Grabnar
00da7efb44 Merge remote-tracking branch 'origin/jg_SCI_328_moving_workflows' 
Conflicts:
	app/models/experiment.rb

SCI-328 #close
 2016-08-24 13:11:10 +02:00
Zmago Devetak
9dc7708b73 Merge pull request #85 from ZmagoD/zd_SCI_360 
fixes project overview style and add no description link [fixes SCI-360]
 2016-08-23 16:24:22 +02:00
Zmago Devetak
aa650bbc65 Merge pull request #82 from ZmagoD/zd_SCI_359 
Add plus button at the bottom of project overview page [fixes SCI-359]
 2016-08-23 16:23:20 +02:00
Zmago Devetak
65049692ea Merge pull request #78 from ZmagoD/zd_SCI_349 
updating thumbnail
 2016-08-23 16:22:07 +02:00
Mojca Lorber
ac68db97b9 fixes tile size in edit canvas 2016-08-23 13:33:10 +02:00
Jure Grabnar
027193f937 Add links for moving module groups 2016-08-23 10:09:25 +02:00
Jure Grabnar
358f2b1c47 Add moving for newly created modules 2016-08-23 10:00:34 +02:00
zmagod
03a3759cf5 fixes project overview style and add no description link [fixes SCI-360] 2016-08-23 08:52:53 +02:00
Jure Grabnar
667b7671a6 Add connections for moved workflows 2016-08-22 17:26:21 +02:00
zmagod
bb11999566 adds plus button at the bottom of project overview page [fixes SCI-359] 2016-08-22 15:22:05 +02:00
zmagod
d38f29d207 set ajax loading of experiments images [fixes SCI-349] 2016-08-22 11:29:19 +02:00
mlorb
ed1cd193ac Merge pull request #77 from mlorb/ml_sci_357 
fixes warning messages when loading a new protocol that is linked with repository [SCI-357]
 2016-08-22 08:56:36 +02:00
Jure Grabnar
5bb99adb25 Add frontend logic for moving workflows from canvas 2016-08-19 17:11:17 +02:00
zmagod
b86e67a0d6 refactor initProjectExperiment 2016-08-19 16:38:34 +02:00
Mojca Lorber
fb081be682 fixes warning messages when loading a new protocol that is linked with repository 2016-08-19 16:03:10 +02:00
zmagod
cac5033eba set ajax for workflow img 2016-08-19 15:36:12 +02:00
Jure Grabnar
80498260e5 Add backend for moving task from canvas 2016-08-19 13:53:43 +02:00
Mojca Lorber
51e0d53b12 remove code duplication 2016-08-19 13:08:35 +02:00
Mojca Lorber
571f5b60f3 fixes notifications appearance and disappearance and content adjustment 2016-08-19 10:48:43 +02:00
Mojca Lorber
5c77167388 update buttons 2016-08-18 16:47:16 +02:00
Mojca Lorber
5695842fe3 fixes notifications when creating sample types and groups 2016-08-18 16:05:15 +02:00
zmagod
072f816286 refactor restore_after_tutorial function 2016-08-18 08:55:40 +02:00
zmagod
f2ee5d73a0 fixed project tutorial bug 2016-08-18 08:53:34 +02:00
mlorb
36d24523b4 Merge pull request #61 from biosistemika/ml_sci_291 
fixes dissapearance of sample type/group when editing samlpe or adding new sample [SCI-291]
 2016-08-18 08:25:31 +02:00
Matej Zrimšek
e4a6a3944e Added deleting of files on S3 server when editing/removing a file. Some refactoring. 2016-08-17 18:13:35 +02:00
Matej Zrimšek
ccdccc5cf1 Changed file uploding to work properly with multiple files and be user friendly in case of errors. Some function names refactoring. 2016-08-17 18:11:13 +02:00
Matej Zrimšek
c87ba5b45c Multiple files upload handling and user experience improved. Spinner now also prevents user from accidentally leaving page. 2016-08-17 18:10:32 +02:00
Matej Zrimšek
951cf67b3d A lot of file uploading edge cases considered. File uploading is now actually redirected to S3 server, as before was not. Error functions changed and error output format specified, which should be used consistently throughout the application. Some other refactoring. 2016-08-17 18:08:21 +02:00
Matej Zrimšek
b70f49f4e0 Some additional refinements. 2016-08-17 18:00:04 +02:00
Matej Zrimšek
86880f0299 Additional changes, refactoring and improvements. 2016-08-17 17:57:54 +02:00
Matej Zrimšek
01aad1764c Some hotfixes to previous commit. Client-side file validation added (except file type validation). Some refactoring. 2016-08-17 17:54:45 +02:00
Matej Zrimšek
e2f94caa96 Step creation is now completelly validated on client-side also, to avoid front-end problems after server-side validation. This was needed as lots of issues were caused by this. Also step creation user experience is enriched and refactoring of related code was done. 2016-08-17 17:54:06 +02:00
Jure Grabnar
77f75fdeb6 Delete module from canvas when moving 2016-08-17 15:46:30 +02:00
Jure Grabnar
0cdea0b51a Add modal for moving task on canvas 2016-08-17 15:46:30 +02:00
Zmago Devetak
da735a51f4 Merge pull request #62 from ZmagoD/zd_SCI_318 
Zd sci 318
 2016-08-17 10:01:10 +02:00
zmagod
4293f9c267 Merge branch 'zd_SCI_271' of https://github.com/ZmagoD/scinote-web into ZmagoD-zd_SCI_271 2016-08-17 09:58:29 +02:00
zmagod
7abc8f3a90 Merge branch 'master' into experiment-level 2016-08-17 09:28:35 +02:00
zmagod
76dd4bc90a fixed protocol status bar [fixes SCI-318] 2016-08-16 10:47:23 +02:00
Mojca Lorber
7dc0c3672a fixes dissapearance of sample type/group when adding/editing new sample 2016-08-16 10:17:29 +02:00
Jure Grabnar
c16eed5e63 Add missing dropdown_actions.js 2016-08-16 09:48:19 +02:00
zmagod
5e647f62d5 changed import label [fixes SCI-317] 2016-08-16 09:34:04 +02:00
zmagod
852fe499fb clean up linked protocol 2016-08-12 16:31:40 +02:00
Mojca Lorber
e6f205368b fixes tutorial bug of inappropriate window 2016-08-12 11:33:27 +02:00
Jure Grabnar
555ed05ae6 Refactor/DRY dropdown actions code for experiment 2016-08-12 10:18:35 +02:00
zmagod
701c26a2dd fixed canvas edit and samples tutorial [fixes: SCI-271] 2016-08-11 16:21:55 +02:00
zmagod
a128815122 fixed tutorial tasks on canvas 2016-08-11 16:06:51 +02:00
zmagod
2e1d81a985 fixed project archive in tutorial 2016-08-11 12:40:16 +02:00
Jure Grabnar
7f21ae138a Set clone actions/routes/view 
DRY code for showing AJAX on project#show page
 2016-08-11 09:46:15 +02:00
scibb
696075bf0f smaller grid steps set. In addition enddpoint bug was fixed 
SCI 170, SCI 292'
 2016-08-08 15:18:38 +02:00
jbargu
3f91e7a476 Merge pull request #47 from biosistemika/jg_explvl_reports 
Update reports with experiment level

[Fixes SCI-35].
 2016-08-08 08:51:23 +02:00
Jure Grabnar
cafec6a1b4 Fix controls on experiment contents 
Also fix bug with adjencent elements not updating controls.

Fixes SCI-35.
 2016-08-04 16:05:03 +02:00
zmagod
a4ec558596 start to implement project overview page 2016-08-04 12:57:33 +02:00
Jure Grabnar
da2a06c999 Fix global sort to work with experiments 2016-08-03 14:59:53 +02:00
Jure Grabnar
acc41dae40 Add experiment content report dialog 
Adding still has to be implemented
 2016-08-03 12:52:51 +02:00
zmagod
caa80642c0 [fixes SCI-304], [fixes SCI-37] 2016-08-03 09:34:10 +02:00
zmagod
e95f518964 refactor canvas_controller, experiments_controller 2016-07-28 16:01:53 +02:00
zmagod
352944fc33 added new/edit experiment modals 2016-07-28 14:44:44 +02:00
Luka Murn
076b67620f Migration GitLab -> GitHub 2016-07-21 13:11:15 +02:00
Luka Murn
055298fee8 Initial commit. 2016-02-12 16:52:43 +01:00