scinote-eln/scinote-web
1
1
Fork 0
mirror of https://github.com/scinote-eln/scinote-web.git synced 2024-09-21 23:46:21 +08:00
Code Issues Packages Projects Releases Wiki Activity
6028 commits 70 branches 179 tags 165 MiB
Commit graph

423 commits

Author SHA1 Message Date
Alex Kriuchykhin a4b75f00d2
Merge pull request #1400 from okriuchykhin/ok_SCI_2727 
Make AWS access key variables optional [SCI-2727]
 2018-11-28 14:45:45 +01:00
Oleksii Kriuchykhin 32d00cb2b9 Make AWS access key variables optional [SCI-2727] 2018-11-28 10:41:05 +01:00
Alex Kriuchykhin 5ce6a9babd
Merge pull request #1399 from okriuchykhin/ok_SCI_2727 
Add subfolder option to S3 bucket config [SCI-2727]
 2018-11-27 17:46:36 +01:00
Oleksii Kriuchykhin 32536db171 Add subfolder option to S3 bucket config [SCI-2727] 2018-11-27 14:58:34 +01:00
mlorb 18d9ab5888 fixes upon @Ducz0r request 2018-11-26 14:23:26 +01:00
mlorb 4052fad9e0 fix hound 2018-11-23 15:51:18 +01:00
mlorb f61187dd18 Hide sign-in with third party applications (e.g. LinkedIn) in Oauth flows 2018-11-23 15:44:04 +01:00
Alex Kriuchykhin d524a1d508
Merge pull request #1364 from okriuchykhin/ok_SCI_2778 
Add time format selection to settings [SCI-2778]
 2018-11-19 10:17:09 +01:00
Luka Murn e9c0b34662 Merge branch 'core-api' into 'master' 
Conflicts:
	Gemfile
	app/services/api.rb
	config/initializers/api.rb
	config/initializers/extends.rb
	config/routes.rb
	db/schema.rb
	spec/controllers/api/api_controller_spec.rb
 2018-11-14 16:59:04 +01:00
Oleksii Kriuchykhin 8d0dbc7076 Add time format selection to settings [SCI-2778] 2018-11-09 16:19:40 +01:00
Oleksii Kriuchykhin 60e78fa868 Improve code style for error handling [SCI-2773] 2018-11-07 15:43:44 +01:00
Alex Kriuchykhin e9b64b65a3
Merge pull request #1330 from okriuchykhin/ok_SCI_2770 
Add request rate throttling for API [SCI-2770]
 2018-10-19 09:38:31 +02:00
Oleksii Kriuchykhin ed46115b3f Implement inventory column data type name mappings [SCI-2772] 2018-10-16 15:35:02 +02:00
Matej Zrimšek 17380ba0ca Refactoring rebased code [SCI-2641] 2018-10-15 01:12:25 +02:00
Matej Zrimšek aa30cf6130 Refactor StringUtility#to_filesystems_compatible_filename [SCI-2641] 2018-10-12 07:40:22 +02:00
Matej Zrimšek 7152d2f0f1 Fix/update file naming convection for exported files [SCI-2641] 2018-10-12 07:40:21 +02:00
Oleksii Kriuchykhin 8cf59d8d22 Add request rate throttling for API [SCI-2770] 2018-10-11 09:48:06 +02:00
Luka Murn dc2ab5fdc0 Fix the Doorkeeper config/access for all users (due to update of Gem) 2018-10-07 13:11:56 +02:00
Luka Murn 7b5a65416a Update status endpoint 2018-10-06 11:47:23 +02:00
Oleksii Kriuchykhin 49e788a9ad Mergre latest core-api [SCI-2515] 2018-09-14 10:24:05 +02:00
Alex Kriuchykhin 18dfeb537b
Merge pull request #1269 from okriuchykhin/ok_SCI_2604 
Improve health check endpoint [SCI-2604]
 2018-08-24 16:55:47 +02:00
Oleksii Kriuchykhin 4d49671ae8 Add CRUD for inventories and columns [SCI-2690][SCI-2691][SCI-2692][SCI-2693][SCI-2694][SCI-2695] 2018-08-24 16:41:26 +02:00
Oleksii Kriuchykhin 730ce96a43 Add inventory item CREATE endpoint [SCI-2687] 2018-08-24 15:46:00 +02:00
Oleksii Kriuchykhin 5488fc66fc Refactor JSON API mime type registration [SCI-2687] 2018-08-24 15:37:23 +02:00
Oleksii Kriuchykhin 490376513b Add inventory item CREATE endpoint [SCI-2687] 2018-08-24 15:36:19 +02:00
Oleksii Kriuchykhin c8abb3d9b8 Add user_identities CRUD endpoints, make API V1 togglable [SCI-2664][SCI-2686] 2018-08-24 15:27:59 +02:00
Alex Kriuchykhin 1832c0e806
Merge pull request #1262 from okriuchykhin/ok_SCI_2614 
Add read inventories and inventory items endpoints [SCI-2614][SCI-2616][SCI-2617]
 2018-08-24 15:22:13 +02:00
Oleksii Kriuchykhin 0322316d74 Make API V1 togglable [SCI-2686] 2018-08-24 12:11:28 +02:00
Oleksii Kriuchykhin 6795b08a91 Refactor invite users modal initialization [SCI-2651] 2018-08-20 13:13:34 +02:00
Oleksii Kriuchykhin 1a57289009 Improve health check endpoint [SCI-2604] 2018-08-17 16:13:21 +02:00
Oleksii Kriuchykhin ecde634a2c Add OAuth2 provider [SCI-2515] 2018-08-17 13:17:59 +02:00
Oleksii Kriuchykhin 3f7590bb57 Rename type for inventories and add mimetype for JSON API [SCI-2614][SCI-2616][SCI-2617] 2018-08-10 17:01:14 +02:00
Oleksii Kriuchykhin 4df9a4c9ca Fix code style warnings [SCI-2614][SCI-2616][SCI-2617] 2018-08-08 17:01:49 +02:00
Oleksii Kriuchykhin 298b866df4 Fix failing tests [SCI-2611][SCI-2612] 2018-08-07 14:58:02 +02:00
Oleksii Kriuchykhin 22e12d8fc3 Add GET teams and team API endpoints [SCI-2611][SCI-2612] 2018-07-31 13:40:27 +02:00
Oleksii Kriuchykhin 0e372af729 Adds API authentication with Azure AD [SCI-2608] 2018-07-24 14:21:33 +02:00
zmagod 43903080ce code style fixes 2018-07-04 12:42:28 +02:00
nbernot 7aacc2b4a2 extract repository_item html form creation in to a separate 'class' 2018-06-29 14:28:06 +02:00
Zmago Devetak 7fd3eec195
Merge pull request #1219 from ZmagoD/zd_SCI_2415 
move maximum file size limit to an ENV variable [fixes SCI-2415]
 2018-06-26 18:43:16 +02:00
Oleksii Kriuchykhin c0232d9eb2 Add extend for task child elements in reports [SCI-2377] 2018-06-19 14:34:36 +02:00
zmagod db1944cc90 move maximum file size limit to an ENV variable [fixes SCI-2415] 2018-06-19 14:15:14 +02:00
Luka Murn 9a4fdd166e Merge branch 'lm-sci-2431-fix' of https://github.com/Ducz0r/scinote-web into Ducz0r-lm-sci-2431-fix 
Conflicts:
	app/views/projects/index.html.erb
 2018-06-12 17:44:42 +02:00
Zmago Devetak 74ccaf06b9
Merge pull request #1184 from ZmagoD/zd_SCI_2417 
adds asset_text_data to global search options
 2018-06-08 14:30:52 +02:00
Luka Murn b324a2dab3 Restyle activities page 2018-06-07 09:29:47 +02:00
zmagod 9abf50e7c5 Limits the max. amount of rows when importing into inventories [fixes SCI-2468] 2018-05-31 10:45:31 +02:00
zmagod 3da098cb60 fixes the issue with extraction of text from file [fixes SCI-2417] 2018-05-31 09:42:57 +02:00
zmagod e0908fb85f adds asset_text_data to global search options 2018-05-30 18:18:09 +02:00
Luka Murn f8c8887d72 Forgot to remove the constant 2018-05-27 17:23:50 +02:00
Luka Murn b86edf20a5 Remove auto-toggling of navigation sidebar depending on width 2018-05-27 15:44:15 +02:00
Luka Murn dac44acf2a Rename sciNote -> SciNote (config/ folder) 2018-05-21 15:11:12 +02:00
zmagod b125863baf Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2371 2018-05-17 11:25:33 +02:00
okriuchykhin ac6c5de83c
Merge pull request #1134 from okriuchykhin/ok_SCI_2301 
Fix initialization of default value for repositories limit [SCI-2301]
 2018-05-16 10:24:56 +02:00
Oleksii Kriuchykhin beacdb934f Change default inventory limit to 6 [SCI-2301] 2018-05-16 10:23:36 +02:00
zmagod 4573655ec8 adds save PDF report to inventory feature [fixes SCI-2371] 2018-05-16 09:31:19 +02:00
Luka Murn 10cd494936
Update WEBINARS_URL 2018-05-15 15:58:35 +02:00
Oleksii Kriuchykhin 1e5f9519ca Fix initialization of default value for repositories limit [SCI-2301] 2018-05-11 10:34:32 +02:00
Oleksii Kriuchykhin 8ec643c54b Move REPOSITORIES_LIMIT from constants to env variables [SCI-2301] 2018-05-09 18:03:16 +02:00
Zmago Devetak a6275062b7
Merge pull request #1126 from ZmagoD/zd_SCI_2344 
adds new string truncation method [fixes SCI-2344]
 2018-05-07 16:30:12 +02:00
Zmago Devetak d744f24b85
Merge pull request #1118 from ZmagoD/zd_SCI_2323 
sign_out user after 7 days [fixes SCI-2323]
 2018-05-03 14:36:44 +02:00
zmagod 0b721d86b1 adds new string truncation method [fixes SCI-2344] 2018-05-03 14:24:23 +02:00
zmagod 0584453575 fixes per @okriuchykhin 's request 2018-04-26 17:18:03 +02:00
zmagod e9642cadad Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2304 2018-04-26 14:26:30 +02:00
Luka Murn cd04596c62
Merge pull request #1111 from Ducz0r/lm-sci-2276-fix 
Update the code for repository table states so it (hopefully) causes less errors [SCI-2276]
 2018-04-25 12:37:27 +02:00
Luka Murn bd6f97fabc Add initializer to include helpers in all assets (including .js) 2018-04-25 10:51:19 +02:00
zmagod 503ad1ba20 removes samples from views [fixes SCI-2304] 2018-04-24 08:26:55 +02:00
Luka Murn 68caf56ec2 Add comment to constants 2018-04-20 12:31:22 +02:00
Luka Murn 21e7e7057e Refactor all the methods into two new services 2018-04-20 12:31:22 +02:00
Luka Murn 5e2622ecfc Change default repository state to Ruby representation 
Also remove some dead code from repositories datatables
 2018-04-20 12:31:22 +02:00
zmagod dafa29d4bf Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2124 2018-04-20 10:33:15 +02:00
Zmago Devetak 93fc1af12d
Merge pull request #1083 from ZmagoD/zd_SCI_2259 
set limit on maximum number of dropdown list items [fixes SCI-2259]
 2018-04-19 17:17:54 +02:00
zmagod 9d282d1800 adds new reports index page [fixes SCI-2124] 2018-04-18 16:47:52 +02:00
mlorb 04a20ab7ec change links 2018-04-16 17:05:22 +02:00
mlorb a10f671184
Merge pull request #1081 from mlorb/ml-sci-2123 
Refactor settings into the new navigation bar [SCI-2123]
 2018-04-09 13:21:16 +02:00
zmagod b12f6f1b92 set limit on maximum number of dropdown list items [fixes SCI-2259] 2018-04-09 12:50:25 +02:00
Zmago Devetak bdb6554870
Merge pull request #1049 from ZmagoD/zd_SCI_2218_2219 
adds manage columns page
 2018-04-06 17:06:28 +02:00
mlorb 70dfe66b2d refactoring 2018-04-06 14:20:40 +02:00
zmagod cf7761daaa Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into ok_SCI_2223 2018-04-06 12:56:39 +02:00
mlorb b8e91e91a1 refactor settings into the new navigation bar 2018-04-05 16:30:02 +02:00
zmagod a8a19df06d Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2218_2219 2018-04-05 08:51:58 +02:00
okriuchykhin e608d629c7
Merge pull request #1068 from okriuchykhin/ok_SCI_2217 
Refactor file preview modal [SCI-2217]
 2018-04-05 00:18:43 +02:00
zmagod 0c05c60ebf Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2218_2219 2018-04-04 16:06:38 +02:00
Zmago Devetak d1f3a65279
Merge pull request #1073 from ZmagoD/zd_SCI_2206 
add ID column to repository [fixes SCI-2206]
 2018-04-04 15:39:59 +02:00
Oleksii Kriuchykhin 3b7977ee3b Merge latest changes from ux-release-1 [SCI-2217] 2018-04-04 14:20:34 +02:00
zmagod 38b84edfb0 Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2139_2121 2018-04-04 12:59:41 +02:00
zmagod e630d3113f add ID column to repository [fixes SCI-2206] 2018-04-04 11:55:11 +02:00
mlorb 11c0f5e5a1
Merge pull request #1067 from mlorb/ml-sci-2243 
Style Guide - refactor colors, typography and buttons [SCI-2243]
 2018-04-03 11:30:02 +02:00
mlorb e5e92eb215 fix the rest of the constants 2018-04-03 10:28:39 +02:00
Oleksii Kriuchykhin 51860652c1 Refactor smart annotations modal [SCI-2223] 2018-04-02 20:38:56 +02:00
okriuchykhin 5e0cf58bc5
Merge pull request #1058 from okriuchykhin/ok_SCI_2111 
Implement search in file repository cells and improve performance [SCI-2111]
 2018-03-30 12:39:47 +02:00
Oleksii Kriuchykhin cc5d8550b1 Refactor file preview modal [SCI-2217] 2018-03-30 11:50:28 +02:00
zmagod 56b0900619 Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2218_2219 2018-03-29 16:42:10 +02:00
zmagod 7c1390ece2 implement sidebar toggle [fixes SCI-2232] 2018-03-28 14:12:11 +02:00
mlorb 22afa61b11 refactor colors 2018-03-28 13:54:01 +02:00
Oleksii Kriuchykhin e42fc3117b Implement search in file repository cells and improve performance [SCI-2111] 2018-03-26 13:19:09 +02:00
zmagod 3efe06a410 Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2139_2121 2018-03-26 12:02:24 +02:00
mlorb faaecec2ff implement new Help dropup in navigation 2018-03-23 14:08:27 +01:00
zmagod 3be3c00574 adds manage columns page [fixes SCI-2218] 2018-03-22 09:35:36 +01:00
zmagod 62858bc14f Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2139_2121 2018-03-20 14:46:11 +01:00
zmagod 1ad8c259d1 add blank page for repositories [fixes SCI-2139] 2018-03-20 14:45:57 +01:00
zmagod 1cdba5e0d3 Merge branch 'samples_to_repositories_table_migration' of https://github.com/biosistemika/scinote-web into zd_SCI_2068 2018-03-16 11:05:16 +01:00
Zmago Devetak d7679dcb99
Merge pull request #1032 from ZmagoD/zd_SCI_2141 
refactor global activities in separate page [fixes SCI-2141]
 2018-03-13 15:20:14 +01:00
zmagod dd2f7dd417 Merge branch 'master' of https://github.com/biosistemika/scinote-web into samples_to_repositories_table_migration 2018-03-13 13:24:36 +01:00
Oleksii Kriuchykhin be1ead22e0 Implement importable selector for repository columns [SCI-2078] 2018-03-13 11:36:05 +01:00
zmagod e218cae453 refactor global activities in separate page [fixes SCI-2141] 2018-03-12 11:01:23 +01:00
mlorb 64e26e1c60 add file custom column type to db 2018-03-09 17:04:54 +01:00
zmagod 4f951f6679 adds unit specs for datatable service [fixes SCI-2068] 2018-03-09 14:22:00 +01:00
Oleksii Kriuchykhin 1765d83cd1 Refactor search to support repository list items [SCI-2108] 2018-03-09 11:05:43 +01:00
mlorb 5e44859ce0
Merge pull request #1010 from mlorb/ml-sci-1826 
Sign up with linkedIn account [SCI-1826]
 2018-03-05 13:24:36 +01:00
Zmago Devetak 50ccec5007
Merge pull request #1009 from ZmagoD/zd_SCI_2066 
add info modal for repository items [fixes SCI-2066]
 2018-03-05 12:49:29 +01:00
mlorb f5949e9d10 refactor 2018-03-01 17:52:24 +01:00
Luka Murn 070450f813 Merge branch 'release-1.12.11' 
Conflicts:
	config/initializers/extends.rb
 2018-03-01 14:04:57 +01:00
mlorb 9199f287ba fix hound 2018-03-01 09:18:36 +01:00
mlorb 08439e7f58 sign up with linkedIn account 2018-02-28 18:12:21 +01:00
Oleksii Kriuchykhin aa933ad1f4 Add extendable file types mappings for icons [PIP-46] 2018-02-26 14:23:02 +01:00
okriuchykhin 5a94b40d9c
Merge pull request #978 from okriuchykhin/ok_SCI_2003 
Improve files handling in protocol cloning [SCI-2003]
 2018-02-12 11:01:59 +01:00
zmagod 6b7ff11bcf setup models for repository list column [fixes SCI-2015] 2018-02-07 15:28:28 +01:00
Luka Murn b5ac4494d5 Uncommit load_addons_specs.rb 2018-02-06 16:58:15 +01:00
Luka Murn 5281d0792e Comment load_addons_specs.rb out 2018-02-06 08:48:33 +01:00
Luka Murn 4ddc7dfa85 Comment react-hijack code 2018-02-06 08:00:29 +01:00
Oleksii Kriuchykhin 16e1d072b9 Improve files handling in protocol clonning [SCI-2003] 2018-02-01 15:44:08 +01:00
zmagod 2684d2b515 fix typo 2018-02-01 15:34:40 +01:00
zmagod 952173fbd6 escape if no feature folder present 2018-02-01 14:03:36 +01:00
zmagod c6d585bc57 adds spec/features loader [fixes SCI-1998] 2018-02-01 13:37:52 +01:00
okriuchykhin df66a3b410
Merge pull request #973 from okriuchykhin/ok_SCI_1975 
Allow optional tagging for logs [SCI-1975]
 2018-01-31 13:31:01 +01:00
Luka Murn d4183aa253 Fix a typo 2018-01-31 08:20:42 +01:00
Oleksii Kriuchykhin bdc60b9d53 Allow optional tagging for logs [SCI-1975] 2018-01-30 18:24:01 +01:00
Luka Murn f752f82658 Fix canaid initializer so it only uses required Gems' permissions 
This should make sure that other addons that are located in
/addons folder, but not actually required by the core,
do not cause trouble.
 2018-01-26 16:24:28 +01:00
Zmago Devetak 4716fc7752
Merge pull request #955 from biosistemika/decoupling 
Decoupling
 2018-01-25 11:33:06 +01:00
okriuchykhin a2896031ab
Merge pull request #951 from okriuchykhin/ok_SCI_1949 
Allow first user seeding from env variables [SCI-1949]
 2018-01-23 14:02:54 +01:00
zmagod f8a3fca2db Merge branch 'master' of https://github.com/biosistemika/scinote-web into decoupling 2018-01-23 11:06:33 +01:00
zmagod 246146c71e adds Delayed::Worker initializer [fixes SCI_1948] 2018-01-19 16:30:29 +01:00
Oleksii Kriuchykhin d1a515da90 Allow first user seeding from env variables [SCI-1949] 2018-01-18 16:23:33 +01:00
Adrian Oprea a5ecc1a36e refactor(addons_loader): Extract paths to variables / build mega-config file 
- Create variables for the paths the script impacts
- Create a file to host the configuration, import each add-on config and re-export them through a single object
 2018-01-16 17:22:00 +02:00
zmagod 3e95503017 adds(addon_loader) a generator that creates a js file with available addons 
Signed-off-by: zmagod <zmago_devetak@yahoo.com>
 2018-01-16 14:18:31 +01:00
zmagod fc5daabb73 fix(addon_loader): make symlink to target addon/client 
Signed-off-by: zmagod <zmago_devetak@yahoo.com>
 2018-01-16 10:54:11 +01:00
zmagod ed44762ff2 adds rescue 2018-01-15 08:44:59 +01:00
zmagod 0bfa92046d add an initializer that creates symlinks to react components in core [fixes SCI-1902] 2018-01-12 17:14:27 +01:00
Oleksii Kriuchykhin 8b11427780 Add allowed zip file type to Powerpoin and Word files [SCI-1916] 2018-01-11 15:17:30 +01:00
Luka Murn cf291bf887 Merge branch 'gilson-iot-rails4' 
Conflicts:
	Gemfile.lock
 2017-12-19 10:56:39 +01:00
Zmago Devetak 00be4460cc
Merge pull request #806 from ZmagoD/disable_tiny_mce_asset_unless_step 
Fixes bug with embedded images [SCI-1624]
 2017-12-12 09:53:24 +01:00
zmagod e69e9f6794 remove unneeded comment and add tiny_mce_asset regex in a constant 2017-11-24 17:04:01 +01:00
Luka Murn c51a85a161
Merge pull request #888 from biosistemika/lm-sci-1795 
Setup main architecture for permissions refactoring [SCI-1795]
 2017-11-23 12:32:49 +01:00
Zmago Devetak 2f66c1df25
adds travis config file (#873) 
* adds travis config file

* add dist to travis

* adds script section

* test env

* remove globals

* adds hashed variables

* add matrix

* removed matrix

* test env

* testing

* test

* update Gemfile

* test travis

* test

* test

* test travis

* test

* build with docker

* test

* test

* ads

* add devise secre

* test travis

* test

* test

* test

* adds travis db configurations

* make travis happy

* test

* test

* test

* test

* test

* test

* testing devise

* test

* test

* teset

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* edit env

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* test

* final commit

* test

* cleanup

* cleanup
 2017-11-23 09:55:57 +01:00
Oleksii Kriuchykhin fe8b7d26c1 Improve server side assets validation display for steps [SCI-1747] 2017-11-21 13:48:06 +01:00
Luka Murn ccef5571f1 Add dependency to Canaid, the permission helper library 2017-11-16 15:49:13 +01:00
Oleksii Kriuchykhin 84f4aba213 Pull latest master into gilson-iot-rails4 2017-11-15 15:15:26 +01:00
Luka Murn e740e586e8 Additional fixes required by latest merge from master (nr. 2) 2017-10-23 10:43:32 +02:00
Luka Murn 6c2c5aff17 Additional fixes required by latest merge from master 2017-10-23 09:51:13 +02:00
Oleksii Kriuchykhin 58c2487eb6 Enable :preserve_files in paperclip config [SCI-1626] 2017-10-10 13:32:14 +02:00
Oleksii Kriuchykhin c3fceb90df Backport API to Rails-4 [SCI-1579] 2017-08-30 13:30:41 +02:00