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751 commits

Author SHA1 Message Date
Luka Murn
a2935c6620 Add sample info modal popup to sample smart annotations 
This MR also loads datatables.js globally (as it's required by
the modal), so I removed it everywhere in code, and it shouldn't
be used anymore (e.g. '//= require datatables').

Closes SCI-892.
 2017-01-16 15:52:02 +01:00
okriuchykhin
02bfd19d1c Merge pull request #385 from okriuchykhin/ok_SCI_102 
Fix XSS on activites and throghout the rest of app [SCI-102]
 2017-01-16 11:41:38 +01:00
Luka Murn
1acf258c70 Fix minor Zmagohound comment 2017-01-14 10:00:52 +01:00
zmagod
1b2fa78e42 adds user preview to user smart annotation [fixes SCI-832] 2017-01-13 11:34:10 +01:00
Oleksii Kriuchykhin
75031e17b9 Remove double sanitization from views [SCI-102] 2017-01-12 16:54:15 +01:00
Luka Murn
bc03a26d4b Also fix this new year issue on comments display 2017-01-12 15:06:12 +01:00
Luka Murn
8b01f912a0 Fix new year problems with activities 
Closes SCI-876.
 2017-01-12 14:47:15 +01:00
Oleksii Kriuchykhin
0350f2f792 Add html escaping to name filelds in the views [SCI-102] 2017-01-12 11:03:14 +01:00
Oleksii Kriuchykhin
d05c16b0ba Added auto_link wrapper with custom sanitization [SCI-102] 2017-01-11 17:02:17 +01:00
Oleksii Kriuchykhin
0546716a0b Improve user input sanitization, fix bugs [SCI-102] 2017-01-11 15:50:11 +01:00
zmagod
3a1ec0eb5e refactor [fixes SCI-834] [fixes SCI-837] [fixes SCI-823] [fixes SCI-835] [fixes SCI-836] [fixes SCI-824] 2017-01-11 14:56:47 +01:00
Matej Zrimšek
30a9c283fb Added back bullets to images in protocol preview in protocol repository. 2017-01-11 14:15:07 +01:00
Matej Zrimšek
852dc2eb7e Added file downloading to protocol preview in protocol repository. [SCI-878] 2017-01-11 14:14:12 +01:00
zmagod
a4aa933151 refactor smart annotation parser helper 2017-01-11 10:34:14 +01:00
zmagod
a903772de8 style dropdown 2017-01-10 17:05:32 +01:00
zmagod
fc76a4ae6d Merge branch 'smart-annotations' of https://github.com/biosistemika/scinote-web into zd_SCI_834 2017-01-10 14:22:04 +01:00
zmagod
89e8946a47 expand smart annotation 2017-01-10 14:14:21 +01:00
zmagod
e0e998a0d8 add smart annotation parser helper 2017-01-10 14:14:21 +01:00
zmagod
94262b56ef prepare data for atwho 2017-01-10 14:14:21 +01:00
Oleksii Kriuchykhin
4c9c9037ed Enable image preview after editing protocol and disable preview modal animation [SCI-868] 2017-01-09 17:19:46 +01:00
okriuchykhin
3f930ccfce Merge pull request #392 from okriuchykhin/ok_SCI_858 
Fixes wrong samples info modals being shown in samples datatable [SCI-858]
 2017-01-09 12:49:38 +01:00
mz3944
ef431da2db Merge pull request #389 from mz3944/mz-sci-848 
Unable to delete samples [SCI-848]
 2017-01-09 11:57:48 +01:00
mlorb
f14ad0f762 Merge pull request #387 from mlorb/ml_sci_732 
Add protocol preview to search results [SCI-732]
 2017-01-09 11:28:04 +01:00
Oleksii Kriuchykhin
bc8db28746 Fixes wrong samples info modals being shown in samples datatable [SCI-858] 2017-01-09 09:38:42 +01:00
Oleksii Kriuchykhin
aa2b573278 Enable image preview while editing steps and code style improvements [SCI-694] 2017-01-06 15:58:23 +01:00
Matej Zrimšek
ec7a1cb4c0 Replaced remaining related hard-coded names with constants and generalized delete samples name fetching. Minor refactoring. [SCI-848] 2017-01-06 14:23:20 +01:00
Luka Murn
7835753d3c Add atwho-users URL to <body> 2017-01-06 12:48:37 +01:00
Mojca Lorber
aad2eadeae syntax fix 2017-01-06 10:46:36 +01:00
Mojca Lorber
4e7e261225 fix protocol preview 2017-01-06 10:10:33 +01:00
Mojca Lorber
356edba1b3 add protocol preview to search results 2017-01-05 18:08:59 +01:00
Matej Zrimšek
4b0f47675a Fixes experiment button not being clicable in project overview page. [SCI-849] 2017-01-05 14:42:52 +01:00
Oleksii Kriuchykhin
cd3924afd3 Sanitize .html_safe marked strings which contain tags [SCI-102] 2017-01-05 13:04:19 +01:00
Oleksii Kriuchykhin
9c4191a1e0 Initial code commit [SCI-102] 2017-01-05 13:04:19 +01:00
mlorb
59751ec41e Merge pull request #373 from mlorb/ml_sci_709 
Add Protocol Preview to Protocol repository [SCI-709]
 2017-01-04 11:28:55 +01:00
Luka Murn
3bee9d2e12 Save an (yet unworking) version of user smart annotations 
Used so other devs can start working on smart annotations.
 2017-01-04 10:54:02 +01:00
Luka Murn
6402acc102 Merge pull request #377 from Ducz0r/lm-sci-820-fix 
Fix 2 bugs with comments editing [SCI-820]
 2017-01-04 10:47:29 +01:00
Luka Murn
37cd6417c8 Merge pull request #374 from Ducz0r/lm-sci-808-814-fix 
Fix some bugs on sample groups & types page [SCI-808, SCI-814]
 2017-01-04 09:50:26 +01:00
Mojca Lorber
a0704cd873 remove duplicated includes of css and js 2017-01-03 17:33:01 +01:00
zmagod
a434649f42 Merge branch 'master' of https://github.com/biosistemika/scinote-web into office_integration 2017-01-03 16:35:25 +01:00
Mojca Lorber
e555535dfb add edit button to protocol preview modal 2017-01-03 10:04:14 +01:00
okriuchykhin
68ac3486c7 Merge pull request #381 from okriuchykhin/ok_SCI_275 
Add task name to project activity [SCI-275]
 2016-12-30 15:32:08 +01:00
okriuchykhin
cce57d066c Merge pull request #370 from okriuchykhin/ok_SCI_817 
Fix issue with long samples column names in import modal [SCI-817]
 2016-12-30 15:29:32 +01:00
okriuchykhin
e8955b0304 Merge pull request #375 from okriuchykhin/ok_SCI_361 
Add sorting to Project's experiments overview [SCI-361]
 2016-12-30 15:28:53 +01:00
Oleksii Kriuchykhin
f076226b3f Add task name to project activity [SCI-275] 2016-12-29 16:31:48 +01:00
Oleksii Kriuchykhin
d798f1b120 Fix XSS vulnerability in protocol keywords [SCI-632] 2016-12-29 15:15:29 +01:00
Luka Murn
b931b20f02 Fix 2 bugs with comments editing 
Closes SCI-820.
 2016-12-23 20:41:23 +01:00
Oleksii Kriuchykhin
4d3e002c81 Add sorting to Project's experiments overview [SCI-361] 2016-12-23 15:40:01 +01:00
Luka Murn
4b50c73474 Merge pull request #363 from Ducz0r/lm-sci-546-fix 
Restyle step table display in reports [SCI-546]
 2016-12-23 12:57:54 +01:00
Luka Murn
3922be2b17 Change String in sample types & groups 
Closes SCI-808.
 2016-12-23 11:48:57 +01:00
Mojca Lorber
40e3240a99 add content to preview modal 2016-12-22 11:43:11 +01:00
zmagod
e554fdf805 code refactor 2016-12-21 16:52:15 +01:00
Oleksii Kriuchykhin
53ea09c3de Fix issue with long samples column names in import modal [SCI-817] 2016-12-21 14:34:53 +01:00
Oleksii Kriuchykhin
00ea3a027c Fix generation of preview url for new steps and results [SCI-694] 2016-12-20 16:10:53 +01:00
Oleksii Kriuchykhin
cbef971d85 Fix timeouts when fetching images from S3 [SCI-694] 2016-12-20 15:36:07 +01:00
Oleksii Kriuchykhin
d2b76d8385 Improved image preview modal [SCI-694] 2016-12-19 17:36:18 +01:00
Luka Murn
a48eaf662e Restyle step table display in reports so 
Closes SCI-546.
 2016-12-19 15:09:49 +01:00
zmagod
efe41817f2 removes sample group/type link in new sample form [fixes SCI-809] 2016-12-19 10:49:21 +01:00
Oleksii Kriuchykhin
b537feb8a0 Added large preview [SCI-694] 2016-12-16 17:07:08 +01:00
Oleksii Kriuchykhin
8738b3e09d Added image preview to Results [SCI-694] 2016-12-16 15:55:46 +01:00
Oleksii Kriuchykhin
0541253ffa Added modal for images preview [SCI-694] 2016-12-16 15:53:16 +01:00
Zmago Devetak
c8631077df Merge pull request #361 from biosistemika/improved-sample-table 
Improved sample table
 2016-12-16 15:37:54 +01:00
zmagod
ba58ac2a77 Merge branch 'improved-sample-table' of https://github.com/biosistemika/scinote-web into zd_SCI_781_796 2016-12-15 09:26:12 +01:00
zmagod
4d6a85ed7c fixed sample groups colorpicker [fixes SCI-781] 2016-12-15 09:23:38 +01:00
zmagod
b07f9fae59 fixes new sample group/type link in sample row [fixes SCI-796] 2016-12-15 09:23:38 +01:00
zmagod
6d2fb3b02c Merge branch 'improved-sample-table' of https://github.com/biosistemika/scinote-web into zd_SCI_790 2016-12-14 17:05:00 +01:00
okriuchykhin
c4ff12be51 Merge pull request #349 from okriuchykhin/ok_SCI_783 
Fix columns ordering when deleting custom fields [SCI-783]
 2016-12-14 16:19:20 +01:00
Oleksii Kriuchykhin
fa1cf1f04d Better handling of columns deleting with fixing columns ordering [SCI-783] 2016-12-14 15:23:00 +01:00
zmagod
1ff98bb6df adds tooltip to samples dropdown and column names 2016-12-14 13:36:10 +01:00
zmagod
9037ab3f48 fixed navigation link 2016-12-14 10:35:48 +01:00
Mojca Lorber
2cfcba0ceb add protocol preview modal 2016-12-13 10:39:18 +01:00
zmagod
4b0e2baa3f fixes breadcrumbs in secondary nav 2016-12-12 16:03:14 +01:00
zmagod
8dd8a7e7cd Merge branch 'improved-sample-table' of https://github.com/biosistemika/scinote-web into zd_improved_samples_table_SCI_774_775_778_777 2016-12-12 15:52:25 +01:00
zmagod
5176f8b459 clean unneeded code [fixes SCI-778] refactor js 2016-12-12 15:40:13 +01:00
zmagod
d9025a9601 changes create/edit mode buttons [fixes SCI-777] 2016-12-12 14:42:06 +01:00
zmagod
8bb452e4f7 trim long names [fixes SCI-774] adds secondary navigation and sidebar [fixes SCI-775] 2016-12-12 10:30:03 +01:00
zmagod
de3099e4d1 removes asset_helper, fixes loading of processed thumbnails in results and steps and when loading protocols from repository 2016-12-09 13:59:49 +01:00
Luka Murn
1a8b141b95 Add delete custom field functionality 2016-12-09 13:49:19 +01:00
Luka Murn
da630ac2cb Make edit, delete buttons clickable & hide them if neccesary 2016-12-09 13:18:59 +01:00
Mojca Lorber
0e3526c9ad Merge branch 'mlorb-ml-sci-696' into improved-sample-table 
Conflicts:
	app/assets/javascripts/samples/sample_datatable.js
 2016-12-08 15:44:50 +01:00
zmagod
40fdfef67f setup delayed_paperclip gem 2016-12-08 15:24:14 +01:00
zmagod
ac52e643be cleanup direct upload 2016-12-08 11:26:13 +01:00
okriuchykhin
cb2abfa7a9 Merge pull request #325 from okriuchykhin/ok_SCI_712 
Added form for adding new columns to samples table into dropdown [SCI-712]
 2016-12-06 15:00:01 +01:00
zmagod
dd85b128d2 fixed glyphicon-ok position 2016-12-06 14:47:16 +01:00
Oleksii Kriuchykhin
da7e86c7c2 Fix save/delete buttons after updating datatable and added permissions check [SCI-712] 2016-12-06 13:22:26 +01:00
Oleksii Kriuchykhin
f6dd64772a Add columns to samples table without page reload [SCI-712] 2016-12-06 13:22:26 +01:00
Oleksii Kriuchykhin
40db8310fd Move code to sample_datatable.js and removed unused modal [SCI-712] 2016-12-06 13:22:26 +01:00
Oleksii Kriuchykhin
22dabd2177 Added form for adding new columns to samples table into dropdown [SCI-712] 2016-12-06 13:17:05 +01:00
Oleksii Kriuchykhin
94866e8994 Initial code commit for samples columns dropdown [SCI-712] 2016-12-06 13:16:05 +01:00
zmagod
787b8b1600 fixed new sample type/group form 2016-12-06 12:01:02 +01:00
Mojca Lorber
849f78b4df implement reordering of columns in the samples table and change from local to database storage 2016-12-05 11:34:36 +01:00
Zmago Devetak
a376118cd8 Merge pull request #334 from ZmagoD/zd_SCI_746 
fixes bug with deleted team name
 2016-12-05 10:47:39 +01:00
Zmago Devetak
91f29745c4 Merge pull request #314 from ZmagoD/zd_SCI_643 
adds autolink
 2016-12-05 10:47:23 +01:00
zmagod
6274cd413e fixes bug with deleted team name [fixes SCI-746] 2016-12-02 16:07:00 +01:00
zmagod
7725374c42 refactor sample types/groups [fixes SCI-700] 2016-12-02 09:58:35 +01:00
zmagod
83aae59eed adds sample groups index page 2016-12-02 09:33:09 +01:00
Luka Murn
6a770f6a7e Fix inviting users not working 
Closes SCI-750, SCI-751.

Probably reopens parts of SCI-746.
 2016-12-01 15:46:37 +01:00
Luka Murn
c0a03d9f2d Merge pull request #322 from Ducz0r/lm-add-show-version-var 
Add an environmental variable to toggle version display in navbar
 2016-11-30 09:49:40 +01:00
Luka Murn
84d0cf4620 Use rails helpers as per @ZmagoD's request 2016-11-30 09:48:57 +01:00
Luka Murn
76ec77fce4 Merge pull request #329 from biosistemika/simplify-signup 
Merge simplify-signup into master
 2016-11-30 09:41:20 +01:00
Luka Murn
d685ac939b Merge pull request #326 from Ducz0r/lm-sci-746-fix 
Fix some recaptcha form submit errors for signup pages
 2016-11-30 09:35:16 +01:00
zmagod
a2e13441e5 removes create_sample_type modal and related js actions 2016-11-30 09:02:34 +01:00
zmagod
4e4a48620c adds validation to input fields 2016-11-29 18:08:29 +01:00
zmagod
12848f15fa adds sample_type index view with all crud actions 2016-11-29 17:15:54 +01:00
Luka Murn
e099a279b1 Remove link to "Resend confirmation instructions" if not neccesary 
Closes SCI-747.
 2016-11-29 16:12:35 +01:00
Luka Murn
b5d0a39827 Fix some recaptcha form submit errors for signup pages 
Closes SCI-746.
 2016-11-29 15:53:58 +01:00
zmagod
5c0b2d7b24 init sample_types page 2016-11-29 08:57:12 +01:00
Zmago Devetak
1e870a6e7c Merge pull request #320 from ZmagoD/zd_SCI_698 
adds new samples columns dropdown [fixes SCI-698]
 2016-11-28 16:30:16 +01:00
Luka Murn
9f998d6fed Add an environmental variable to toggle version display in navbar 
The variable is called NAVBAR_SHOW_VERSION. If not specified,
it defaults to the current behavior (version is hidden on
production, but visible on development & test environments).
 2016-11-28 10:52:17 +01:00
Luka Murn
d142fa96d9 Merge pull request #317 from Ducz0r/lm-sci-735-fix 
Add Deface hooks to sign up & confirm invitation forms
 2016-11-28 10:22:46 +01:00
zmagod
9d91d2ce28 adds new samples columns dropdown [fixes SCI-698] 2016-11-25 17:29:30 +01:00
Luka Murn
a16bbe8fd2 Typo fix 2016-11-25 11:52:33 +01:00
Luka Murn
cb16ab3c75 Add Deface hooks to signup & confirm invitation forms 2016-11-25 11:50:20 +01:00
Oleksii Kriuchykhin
3fdb20b92c Add full name field to accept invitation form [SCI-738] 2016-11-25 11:15:10 +01:00
Luka Murn
b1b095910c Merge pull request #309 from Ducz0r/lm-remove-unused-files 
Brace for impact...
 2016-11-25 10:00:29 +01:00
Oleksii Kriuchykhin
592ed802b2 Switched to use of recaptcha_input_tag helper method [SCI-706] 2016-11-24 14:19:44 +01:00
Oleksii Kriuchykhin
698e07a3b5 Enable reCaptcha and auto log in on confirm invitation form [SCI-706] 2016-11-24 14:11:02 +01:00
Mojca Lorber
beae54e278 remove already_authenticated alert flash 2016-11-23 14:55:41 +01:00
zmagod
32eea3dbdd adds autolink to result comments 2016-11-23 14:24:51 +01:00
zmagod
fafecce264 adds autolink to comments, tast desc., step desc., experiment desc., samples table 'only custom fields', checklists [fixes SCI-643] 2016-11-23 14:18:50 +01:00
Mojca Lorber
48ac289b6e put recaptcha in helper method 2016-11-22 17:57:42 +01:00
Mojca Lorber
60f23b109b integrate reCaptcha into sciNote 2016-11-22 14:57:41 +01:00
mz3944
c5bc3a4dc6 Merge pull request #303 from mz3944/mz_and_new_tutorial_steps_SCI_571_v2 
Added additional tutorial step for showing protocol link. Tutorial st…
 2016-11-21 16:06:45 +01:00
Luka Murn
59eb1c1d18 Remove unused new, edit user_projects views 2016-11-19 17:01:10 +01:00
Luka Murn
911b7ba72f Remove unused new user_my_module view 2016-11-19 16:59:24 +01:00
Luka Murn
008b31df0c Finish removing new comment forms 2016-11-19 16:54:55 +01:00
Luka Murn
595b213b1a Changes up to samples in views folder 2016-11-19 16:51:40 +01:00
Mojca Lorber
086f937fbb fix empty space and blockquote padding - rich text editing 2016-11-18 12:43:57 +01:00
Matej Zrimšek
f13cc5be0e Added additional tutorial step for showing protocol link. Tutorial steps 1-3 are now completelly handled in JS and not in HTML (preferred way). 2016-11-17 18:03:49 +01:00
Luka Murn
26d04b1f3c Merge branch 'rich-text-formatting' into 'master' 
Conflicts:
	Gemfile.lock
	app/assets/stylesheets/themes/scinote.scss
 2016-11-17 16:39:33 +01:00
Luka Murn
9d3685f872 Merge branch 'gamification' into 'master' 
Conflicts:
	app/controllers/users/invitations_controller.rb
	app/controllers/users/settings_controller.rb
 2016-11-17 16:30:18 +01:00
Matej Zrimšek
c8eb82cc85 Fixed tutorial step numbers and changed getting next page reference on protocols page. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
c64146904a Refactored and added back button for tutorial for steps 19-20. Updated tutorial steps count. 2016-11-17 14:46:04 +01:00
Luka Murn
d1701bd7ae Merge pull request #276 from Ducz0r/lm-sci-637 
Automatically resize textarea elements [SCI-637]
 2016-11-17 09:58:36 +01:00
zmagod
da54d779ec Merge branch 'rich-text-formatting' of https://github.com/biosistemika/scinote-web into zd_SCI_687 2016-11-17 08:48:40 +01:00
Luka Murn
a3bbf94643 Add a smart_text_area tag & implement it throughout application 
This fixes the mentioned issues @mlorb mentioned.
Closes SCI-637.
 2016-11-16 17:57:01 +01:00
Luka Murn
aadcdde417 Merge pull request #294 from Ducz0r/lm-sci-674-fix 
Import protocol steps' rich text styling when importing protocols [SCI-674]
 2016-11-16 16:59:18 +01:00
Oleksii Kriuchykhin
d2e29935cf Improved tutorial styling [SCI-685] 2016-11-16 15:44:06 +01:00
zmagod
b781db9667 fixed bullets 2016-11-16 15:30:14 +01:00
Zmago Devetak
d3234bc52f Merge pull request #284 from biosistemika/zd_SCI_662 
fixes description label [fixes SCI-662]
 2016-11-16 14:16:57 +01:00
zmagod
7953372d83 add description label 2016-11-16 13:59:35 +01:00
Luka Murn
83160a487b Fix importer so it supports rendering & importing rich text format 
Closes SCI-674.
 2016-11-15 16:57:53 +01:00
Luka Murn
04749c3b2c Allow inviting of existing, unconfirmed users 
Closes SCI-676.
 2016-11-15 15:04:31 +01:00
Mojca Lorber
c089832909 add validation for result text field 2016-11-15 12:55:32 +01:00
okriuchykhin
01b01939f3 Merge pull request #277 from okriuchykhin/ok_SCI_571 
Additional steps added to tutorial and numbering of the steps fixed [SCI-571]
 2016-11-15 12:05:20 +01:00
Mojca Lorber
607f1381d0 fix mobile view 2016-11-15 10:58:15 +01:00
Mojca Lorber
6afc5c5a4b fix position of buttons in text result 2016-11-14 16:31:48 +01:00
zmagod
67c508a891 fixes description label [fixes SCI-662] 2016-11-14 13:47:20 +01:00
Oleksii Kriuchykhin
2fb3041784 Fixes edit avatar link area [SCI-649] 2016-11-11 13:17:44 +01:00
mlorb
b0b2484fdf Merge pull request #279 from mlorb/ml_sci_638_vol2 
Fix validation problems for rich text fields [SCI-638]
 2016-11-11 12:37:02 +01:00
mlorb
1ca452db7b Merge pull request #273 from mlorb/ml_sci_640 
Add rich text formatting on results and remove markdown [SCI-640]
 2016-11-11 12:06:13 +01:00
mlorb
d42adff77e Merge pull request #275 from mlorb/ml_sci_642 
Add formatted text in reports [SCI-642]
 2016-11-11 12:04:19 +01:00
Oleksii Kriuchykhin
b9f982ead7 Additional steps added to tutorial and numbering of the steps fixed [SCI-571] 2016-11-11 10:07:34 +01:00
Oleksii Kriuchykhin
d2491a18a4 Tutorial Save Protocol step added [SCI-571] 2016-11-11 10:06:18 +01:00
Luka Murn
b42922d32c Add autosize functionality to all textareas 
Closes SCI-637
 2016-11-11 09:09:41 +01:00
Luka Murn
acd8ce8932 Merge pull request #270 from Ducz0r/lm-sci-644 
Convert all large text input fields into text areas (10000 characters)
 2016-11-11 09:07:25 +01:00
Mojca Lorber
1facd2cefe fix validation problems 2016-11-10 17:20:17 +01:00
Mojca Lorber
fbaffbcaab add formatted text in reports 2016-11-10 15:20:40 +01:00
Mojca Lorber
3e162b3a93 remove redcarpet gem - markdown 2016-11-10 14:11:32 +01:00
Mojca Lorber
456c6d1ad6 Copy rich text functionality to text results 2016-11-10 12:19:59 +01:00
Mojca Lorber
ab0879e8d6 Integrate library with default settings 2016-11-09 13:09:53 +01:00
Luka Murn
c88f834ba9 Merge pull request #269 from Ducz0r/lm-sci-569 
Add a refactored invite users modal that can be reused throughout application
 2016-11-08 16:57:05 +01:00
Luka Murn
b246853117 Code styling (use link_to, %w) 2016-11-08 16:43:25 +01:00
Zmago Devetak
82a12f0fce Merge pull request #262 from ZmagoD/zd_add_notification_types_to_constants 
Enables notifications to be extended
 2016-11-08 13:08:15 +01:00
Luka Murn
d44a757b25 Add textareas to checklist name & items 
Closes SCI-644
 2016-11-08 11:50:29 +01:00
Luka Murn
55d8fea359 Make all comment edit fields textareas 2016-11-08 11:29:55 +01:00
Luka Murn
9438ba7e10 Fix a bug 2016-11-08 09:00:00 +01:00
Luka Murn
9260ed31f3 Add Deface hooks to main navbar 2016-11-07 16:57:18 +01:00
Luka Murn
0ab62576a2 Add new modal to organization page, remove old modal code 2016-11-07 09:43:10 +01:00
Luka Murn
a188984ede Allow strings of modal to be replaced 2016-11-07 09:43:10 +01:00
Luka Murn
6fe0d6b3df A working invite modal! 2016-11-07 09:43:10 +01:00
Luka Murn
ccf8932611 Add first version of invite users modal 2016-11-07 09:43:09 +01:00
Matej Zrimšek
0fe5822825 Added profile statistics data hook. 2016-11-03 17:50:32 +01:00
Mojca Lorber
a234c4c9d9 fix merge conflict problem with avatar on profile page 2016-11-03 15:23:09 +01:00
zmagod
1d6b93829c added hooks in notifications preview 2016-11-03 14:48:01 +01:00
Mojca Lorber
44b51d087a merging 2016-11-02 14:06:20 +01:00
Zmago Devetak
6e022699eb Merge pull request #256 from ZmagoD/add_getting_started_flash_hook 
Added getting started hoot to layout/application.html
 2016-10-28 16:19:20 +02:00
zmagod
01b27e9e6d added getting started hoot to layout/application.html 2016-10-28 10:36:15 +02:00
Mojca Lorber
91ec201fd0 make image clickable 2016-10-27 16:18:31 +02:00
Oleksii Kriuchykhin
d28edfb488 Added statistics block in users profile [SCI-566] 2016-10-27 13:44:27 +02:00
Mojca Lorber
8309df0aaf fix hound 2016-10-26 13:51:05 +02:00
Mojca Lorber
878952f072 change edit avatar in profile 2016-10-26 13:41:17 +02:00
zmagod
24b81c96f6 sets current_organization_id if no current_organization is available for current_user, hides separator if only one team present [fixes SCI-608] 2016-10-24 21:20:41 +02:00
Luka Murn
b13fd22408 Add back the release notes URL to navbar 
Closes SCI-604
 2016-10-24 16:59:32 +02:00
Zmago Devetak
12c77df883 Merge pull request #237 from ZmagoD/zd_SCI_593_v2 
Styled global team switch and search [fixes SCI-593]
 2016-10-21 16:28:50 +02:00
Luka Murn
388e092bbf Merge pull request #238 from Ducz0r/lm-sci-596-fix 
SCI-596 fix
 2016-10-21 11:59:01 +02:00
zmagod
49d3879642 fixes padding on mobile, added separator on team switch dropdown, focus search input 2016-10-21 11:46:59 +02:00
Zmago Devetak
4f5b7ad8ad Merge pull request #228 from ZmagoD/zd_SCI_585 
Removes archived projects from index page [fixes SCI-585]
 2016-10-21 11:33:01 +02:00
Luka Murn
7b825a217f Closes SCI-596 2016-10-21 11:08:47 +02:00
zmagod
c642e208dd styled global team switch and search [fixes SCI-593] 2016-10-21 09:33:18 +02:00
zmagod
db806f3c10 hide private projects 2016-10-21 09:06:19 +02:00
Zmago Devetak
f615b3da41 Merge pull request #230 from ZmagoD/zd_SCI_586 
Adds new team button to team switch dropdown [fixes SCI-586]
 2016-10-21 08:29:05 +02:00
zmagod
f21c9e394f adds new team button to team switch dropdown [fixes SCI-586] 2016-10-20 13:47:41 +02:00
zmagod
4c086a6fc1 removes archived projects from index page [fixes SCI-585] 2016-10-20 13:13:44 +02:00
zmagod
8aaf58f75f removes org selector form project archive [fixes SCI-587] 2016-10-20 12:50:55 +02:00
Luka Murn
640a575a3a Merge pull request #222 from biosistemika/modular-tasks 
Merge global team switch into master
 2016-10-18 11:39:09 +02:00
zmagod
54a3237994 displays org name on the project index page if no project 2016-10-17 15:21:19 +02:00
zmagod
8a6899aeea restyled team switch dropdown 2016-10-17 15:21:19 +02:00
zmagod
a116feac9c fixed typos and added truncation to org name 2016-10-17 15:21:19 +02:00
zmagod
1614cbc2b2 fixes repeat tutorial button and localization typos 2016-10-17 15:16:22 +02:00
zmagod
fa36488397 fixed new project form 2016-10-17 15:10:26 +02:00
zmagod
8f24d0d80c fixed new user registration 2016-10-17 15:10:26 +02:00
zmagod
bb9c03df24 fixes controllers 2016-10-17 15:10:26 +02:00
zmagod
d7f514db09 fixes search 2016-10-17 15:10:26 +02:00
zmagod
efe031d766 setup current_organization in all controllers 2016-10-17 15:10:26 +02:00
zmagod
d86a4dd311 setup global team switch view and controller action 2016-10-17 15:10:26 +02:00
Oleksii Kriuchykhin
0ec7c019b3 Fix issue with pop-up windows and turbolinks [SCI-463] 2016-10-17 14:25:54 +02:00
Matej Zrimšek
a6a2a237aa Removed unneeded ERB tags, which caused error. Minor refactoring. 2016-10-17 11:57:47 +02:00
Matej Zrimšek
ece89da391 Removed ruby constants duplicates in JS, because of caching problems. 2016-10-17 11:57:47 +02:00
Matej Zrimšek
778ed8814b Removed some unneeded code. 2016-10-17 11:57:46 +02:00
Matej Zrimšek
0780bd2416 Ruby constants are now automatically available in JS. Refactoring was needed. 2016-10-17 11:57:37 +02:00
Matej Zrimšek
a3dfb59558 Added remaining constants. 2016-10-17 11:30:05 +02:00
Matej Zrimšek
21ec05d541 Refactored searches (user and globals earch) and used constants. 2016-10-17 11:17:59 +02:00
Luka Murn
02d3e03f75 Bugfix for notification emails 
The URLs in notification emails didn't get server URL prepended,
so users could not click on them.
 2016-10-13 12:12:28 +02:00
mlorb
78f7879c04 Merge pull request #216 from mlorb/ml_sci_555 
Adding update notifications in settings [SCI-555]
 2016-10-13 08:53:55 +02:00
Mojca Lorber
8f783f87f7 fixes hound 2016-10-12 15:32:40 +02:00
Mojca Lorber
42f6b679f8 Adding system notifications email function in settings 2016-10-12 11:50:26 +02:00
Mojca Lorber
6bea0a9e1a fixes merge conflicts 2016-10-12 10:55:40 +02:00
Luka Murn
cccabcdd7b Remove invitation_to_organization email 
This email is no longer needed, because if user enables
assignment notifications, he/she will already receive an
email whenever he/she is added to a new organization/team (via
notifications email).
 2016-10-12 10:54:36 +02:00
Mojca Lorber
4f1cbad7da adding update notifications in settings 2016-10-12 10:42:07 +02:00
Zmago Devetak
f25767fdc3 Merge pull request #209 from ZmagoD/zd_SCI_534_remove_popup 
Removed introductory popup [fixes SCI-534]
 2016-10-12 08:13:46 +02:00
Zmago Devetak
b225dc1e29 Merge pull request #210 from ZmagoD/zd_SCI_548_protocol_steps_not_visible 
Fixes protocol steps [fixes SCI-548]
 2016-10-12 08:13:28 +02:00
Oleksii Kriuchykhin
4c6a60c249 Added html_safe to notification email template 2016-10-11 16:46:20 +02:00
Oleksii Kriuchykhin
90c853743c Additional fixes to email markup and logic [SCI-443] 2016-10-11 16:43:17 +02:00
Oleksii Kriuchykhin
5399033fce Added user settings for email notifications [SCI-443] 2016-10-11 16:43:17 +02:00
Oleksii Kriuchykhin
8dc956010c Initial code commit [SCI-443] 2016-10-11 16:43:17 +02:00
zmagod
ea305b356a fixes protocol steps [fixes SCI-548] 2016-10-11 09:10:12 +02:00
zmagod
42a30576e3 removed introductory popup [fixes SCI-534] 2016-10-11 08:33:50 +02:00
Luka Murn
448daab7c8 Merge pull request #207 from biosistemika/add-deface-hotfix 
Merge hotfix 1.3.1 into master
 2016-10-07 18:26:13 +02:00
zmagod
32f03ec94c Add Deface hooks 2016-10-06 16:47:36 +02:00
zmagod
de00a19dd9 fixes styling in settings preferences [SCI-553] 2016-10-06 13:22:44 +02:00
zmagod
5b3889c172 notification index images [fixes SCI-554] 2016-10-06 12:09:01 +02:00
Luka Murn
5c80c8a817 Add "no notifications" to dropdown & notifications index page 2016-10-05 16:58:21 +02:00
Luka Murn
877574e853 Add link to settings from both notification lists 2016-10-05 16:26:26 +02:00
Oleksii Kriuchykhin
083a09c2f7 Add link to notifications index page 2016-10-05 16:13:05 +02:00
okriuchykhin
50f28fe883 Merge pull request #193 from okriuchykhin/ok_global_notifications-SCI-442 
Global notifications screen [SCI-442]
 2016-10-05 16:01:41 +02:00
Oleksii Kriuchykhin
4e2ad1d5e6 Fix the issues after code review [SCI-442] 2016-10-05 15:54:31 +02:00
Oleksii Kriuchykhin
246dae4f46 Code style improvements according to hound [SCI-442] 2016-10-05 15:51:11 +02:00
Oleksii Kriuchykhin
8907e54b49 Global notifications index page added [SCI-442] 2016-10-05 15:51:11 +02:00
Oleksii Kriuchykhin
8b5b0723d1 Initial code commit 2016-10-05 15:51:11 +02:00
Zmago Devetak
f3708bcac0 Merge pull request #191 from ZmagoD/zd_SCI_469_ver2 
Comments date duplication
 2016-10-05 15:47:42 +02:00
Zmago Devetak
eea310514a Merge pull request #194 from ZmagoD/zd_SCI_531_533 
Notification style fixes
 2016-10-05 15:27:36 +02:00
Zmago Devetak
71ad5bf034 Merge pull request #190 from ZmagoD/zd_SCI_529 
Prepare settings screen for notifications
 2016-10-05 14:54:47 +02:00
zmagod
9c7a690944 fixed type, fixed settings controller, fixes setting view on mobile devices 2016-10-05 14:33:22 +02:00
zmagod
5bf278298b fixed navbar on sceens smaller than 1000px 2016-10-05 12:22:27 +02:00
zmagod
d7a4f85ba1 added links to notification project name and task 2016-10-05 09:40:44 +02:00
Jure Grabnar
62356c36a1 Add file extension to global search 2016-10-04 19:04:08 +02:00
zmagod
6229e6a3a1 styled notification settings button [fixes SCI-529] 2016-10-04 16:12:56 +02:00
zmagod
a68e7abc57 first run notification settings 2016-10-04 15:52:48 +02:00
Jure Grabnar
0c7cd52dba Add WOPI icons/buttons to files 2016-10-04 12:34:43 +02:00
Luka Murn
61cb9651c7 Merge pull request #188 from biosistemika/global-notifications 
Global notifications
 2016-10-04 08:30:50 +02:00
zmagod
c9bbab1004 added html_safe to outputed message, hide notifications number when dropdown is toggled, clear all unseen notification form count when the dropdown is toggled, generate notification only to other users 2016-10-03 20:31:00 +02:00
mlorb
00b0f6ab07 Merge pull request #184 from mlorb/ml_sci_472 
Protocol steps/results - change title for comment section, remove info tab [SCI-472]
 2016-10-03 17:20:45 +02:00
Jure Grabnar
03567d6208 Prevent archive of locked result asset 2016-10-03 17:07:57 +02:00
mlorb
153b692c0c Merge pull request #181 from mlorb/ml_sci_321 
Displaying more information for individual samples in Sample table [SCI-321]
 2016-10-03 16:37:35 +02:00
Mojca Lorber
3b0185a45b change title of modal 2016-10-03 16:33:58 +02:00
zmagod
0d23f05698 Merge branch 'global-notifications' of https://github.com/biosistemika/scinote-web into zd_SCI_440 2016-10-03 16:14:22 +02:00
zmagod
36fb2713b3 start fixing comments dates 2016-10-03 16:10:20 +02:00
Zmago Devetak
91c7d8a952 Merge pull request #176 from ZmagoD/zd_SCI_474 
Unify the comments
 2016-10-03 15:26:17 +02:00
zmagod
ea17182372 generate notifications [fixes SCI-440] 2016-10-03 11:37:29 +02:00
Mojca Lorber
5b32be2137 adding subtitle in modal 2016-10-03 09:28:58 +02:00
zmagod
2ee02ec472 mark all seen notifications 2016-10-03 08:20:23 +02:00
Jure Grabnar
1e14955ade Prevent deleting asset on step update 2016-10-01 18:47:05 +02:00
Jure Grabnar
d9fa882d6a Add check for locked files on step delete 2016-10-01 14:51:55 +02:00
Jure Grabnar
a2d6d9a29a Add WOPI controlls to result 2016-10-01 11:23:32 +02:00
Luka Murn
49c5474219 Merge pull request #178 from mz3944/mz_help_button_SCI_13_v2 
Fixed wrong CSS formatting and added release notes link to help link.
 2016-09-30 08:27:57 +02:00
Mojca Lorber
35477b1005 Remove Info tab and change comment title on results view 2016-09-29 16:43:19 +02:00
zmagod
60a503f115 added assignment image 2016-09-29 16:05:43 +02:00
zmagod
e1a1b93d44 fixed migrations 2016-09-29 14:49:58 +02:00
Mojca Lorber
c9fbf845f1 Remove Info tab and change comment title 2016-09-29 14:37:29 +02:00
Matej Zrimšek
a6324d61c5 Fixed wrong CSS formatting, added release notes link to help links, and links now open in new tab. 2016-09-29 14:27:26 +02:00
Mojca Lorber
5d905f0094 refactoring 2016-09-29 14:18:04 +02:00
Luka Murn
f1b74f1906 Fix image names in introductory popup 
This will make sure browsers don't display old, cached images to clients.
 2016-09-29 13:44:38 +02:00
Jure Grabnar
ed8df3cc62 Add favicon url to iframe 2016-09-29 12:19:29 +02:00
zmagod
cab1e9b521 start implement toolbar view 2016-09-28 16:03:52 +02:00
Mojca Lorber
efa7a1d7b5 add sample information in pop-up 2016-09-28 15:46:41 +02:00
zmagod
2a86aaf7e4 changed popout content [fixes SCI-520] 2016-09-28 15:12:30 +02:00
Jure Grabnar
e96e8486ea Add check file permissions to assets controller 
SCI-502 #close
 2016-09-28 09:33:44 +02:00
Jure Grabnar
5aea0fbb19 Refactor the rest of WOPI logic from Nejc 2016-09-28 09:33:44 +02:00
Jure Grabnar
0e9756ad94 Fix bad step view rebase 2016-09-28 09:33:44 +02:00
Nejc Bernot
1b260785ec First working version of office integration 
Only works on scinote-preview
 2016-09-28 09:33:44 +02:00
zmagod
2235778110 fixed project and task comments + fixed date issue 2016-09-27 16:19:31 +02:00
zmagod
1eb9f772f4 refactor sciNote comments js and unified all comments behavior [fixes SCI-474] 2016-09-27 10:30:48 +02:00
zmagod
980ff63104 fixed task comments 2016-09-27 09:18:46 +02:00
zmagod
02bfa1949e fixed project comments 2016-09-27 09:00:02 +02:00
Mojca Lorber
cc5cdf2577 Merge branch 'master' of https://github.com/biosistemika/scinote-web into ml_sci_321 2016-09-26 09:39:05 +02:00
Mojca Lorber
c2b742374f adding popup sample info 2016-09-23 17:45:02 +02:00
mz3944
1c1a7c231e Merge pull request #169 from mz3944/mz_help_button_SCI_13 
Added help dropdown. [SCI-13]
 2016-09-23 13:04:38 +02:00
okriuchykhin
4f0fb7074b Merge pull request #167 from okriuchykhin/ok_SCI-470 
Fix issue with long tags in dropdown list [fixes SCI-470]
 2016-09-23 13:00:06 +02:00
Matej Zrimšek
fc86b7b1fd Added help dropdown. [SCI-13] 2016-09-23 12:52:38 +02:00
Oleksii Kriuchykhin
e8ac754829 Fix issue with long tags in dropdown list [fixes SCI-470] 2016-09-23 11:05:17 +02:00
okriuchykhin
b5c861583d Merge pull request #157 from okriuchykhin/ok_SCI_430 
Fixes issue with unneeded sort icon [fixes SCI-430]
 2016-09-22 16:39:26 +02:00
okriuchykhin
37eedf17a0 Merge pull request #155 from okriuchykhin/ok_SCI-451 
Fixes issue with zoom buttons on canvas [fixes SCI-451]
 2016-09-22 16:11:45 +02:00
Matej Zrimšek
234918a76d Word wrapping and truncating added to whole application [fixes SCI-458]. Fixed some bugs which were related to long/too long text and validations. Modified parts of application to accomodate for longer text limits. 2016-09-21 19:48:18 +02:00
zmagod
06b1992e94 Merge branch 'zd_SCI_436' of https://github.com/ZmagoD/scinote-web into ZmagoD-zd_SCI_436 2016-09-21 19:20:55 +02:00
zmagod
9f56df02d2 removes comment tab and add comment in the info tab [fixes SCI-436] 2016-09-20 18:53:51 +02:00
zmagod
42bbc47f5f first working version 2016-09-20 17:06:07 +02:00
zmagod
da86208441 styled step comments 2016-09-20 14:13:40 +02:00
Oleksii Kriuchykhin
411ee4ee77 Fixes issue with unneeded sort icon [fixes SCI-430] 2016-09-20 11:30:11 +02:00
zmagod
cd64e035c0 set form validations 2016-09-20 09:50:03 +02:00
zmagod
f48553e807 fixed ajax call 2016-09-19 16:12:07 +02:00