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658 commits 69 branches 179 tags 165 MiB
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225 commits

Author SHA1 Message Date
zmagod d482dff2e6 adds label to current project in clone experiment modal [fixes SCI-341] 2016-09-07 08:26:36 +02:00
Matej Zrimšek b0ad6d0753 Fixed result file deletion and result name updating [fixes SCI-409]. Fixed step name and checklists names and its items names checking, and items removing [fixes SCI-407]. 2016-09-06 23:26:00 +02:00
zmagod b44a284b54 sets edit experiment validation 2016-09-06 11:46:28 +02:00
zmagod 9d469f9092 sets front end validation for new experiment modal [fixes SCI-348] 2016-09-06 11:44:03 +02:00
zmagod de6c03a73b setup experiment modal input validation 2016-09-06 11:44:03 +02:00
Zmago Devetak 9440371f3f Merge pull request #131 from ZmagoD/zd_SCI_400 
Sets front end validation for experiment move action [fixes SCI-400]
 2016-09-06 11:39:38 +02:00
Luka Murn bda5120548 Resize archived experiment panels 
Closes SCI-397.
 2016-09-06 10:55:05 +02:00
Mojca Lorber 47983812e7 minimize buttons on mobile phone 2016-09-06 10:10:49 +02:00
Luka Murn 81883911c4 Merge pull request #132 from Ducz0r/lm-sci-228 
Updates to invite users to team modal window
 2016-09-05 15:53:15 +02:00
mlorb aea288371f Merge pull request #129 from mlorb/ml_sci_310 
adds tasks, experiment and project category in protocol search results [SCI-310]
 2016-09-05 15:31:35 +02:00
Mojca Lorber 6a802e9fa7 fixes redirection to project page for all categories in search results 2016-09-05 11:40:49 +02:00
Mojca Lorber 740392c687 optimization 2016-09-05 10:58:37 +02:00
zmagod 667fb67052 sets front end validation for experiment move action [fixes SCI-400] 2016-09-02 16:31:17 +02:00
Zmago Devetak ea26a532e4 Merge pull request #126 from ZmagoD/zd_SCI_332 
By default all experiments should be collapsed
 2016-09-02 15:58:03 +02:00
Mojca Lorber 83034f705d adds tasks, experiment and project category in protocol search results 2016-09-02 11:45:54 +02:00
Luka Murn 61f4fbd1d4 Remove warning info when removing pending user from organization 2016-09-01 13:23:53 +02:00
zmagod ac7ac95da8 [fixes SCI-332] 2016-09-01 10:38:20 +02:00
zmagod e8f971829a added project to session storage 2016-08-31 15:13:17 +02:00
zmagod eb394ce209 fixes searching tables bug [fixes SCI-402] 2016-08-31 11:01:10 +02:00
zmagod b05c3df4d3 adds toggle id only to elements with modules 2016-08-31 10:25:40 +02:00
zmagod eb39eedfdf [fixes SCI-398] again 2016-08-31 08:46:51 +02:00
Zmago Devetak 375a72db18 Merge pull request #114 from ZmagoD/zd_SCI_294_vol2 
fixes reports file name [fixes SCI-294]
 2016-08-30 14:59:07 +02:00
Mojca Lorber 43c3a0bb81 fixes merge again 2016-08-30 12:54:08 +02:00
Mojca Lorber 81f9e59dcd fixes merge 2016-08-30 12:14:15 +02:00
Mojca Lorber e8d187b5f6 Merge branch 'ml_sci_395' 
Conflicts:
	app/views/canvas/edit/modal/_move_module.html.erb
	app/views/canvas/edit/modal/_move_module_group.html.erb
 2016-08-30 11:41:25 +02:00
zmagod f356acb882 fixes reports file name [fixes SCI-294] 2016-08-30 11:36:39 +02:00
Zmago Devetak 6878adda46 Merge pull request #112 from ZmagoD/zd_SCI_338_vol2 
Tutorial
 2016-08-30 11:07:51 +02:00
jbargu fa357dd54f Merge pull request #110 from jbargu/jg_SCI_328_move_task_no_experiment 
Remove move on empty experiments
 2016-08-30 11:06:16 +02:00
Mojca Lorber 596d403d5f change position of buttons 2016-08-30 09:16:53 +02:00
zmagod 5518d1cd1e fixed 16 step of tutorial 2016-08-30 08:52:44 +02:00
Jure Grabnar 0c184dcdcf Remove Move button on empty experiments 
SCI-328 #close.
 2016-08-30 08:26:59 +02:00
zmagod 2ac20d1af1 adds new image + new panel title [fixes SCI-336] 2016-08-29 09:28:29 +02:00
Luka Murn a0311970f8 Add missing commits for showing image and not able to preview 2016-08-26 16:49:32 +02:00
zmagod d886d05ccb Merge branch 'zd_SCI_338' 2016-08-26 16:32:49 +02:00
Matej Zrimšek e3a7f45fdf Merge branch 'master' into mz_file_upload_and_client_side_upgrade 
Conflicts:
	app/assets/javascripts/application.js
	app/views/results/_result_asset.html.erb
	app/views/steps/_step.html.erb
 2016-08-26 11:13:40 +02:00
Zmago Devetak 0cfc758f43 Merge pull request #102 from ZmagoD/zd_SCI_336 
implement first time popup logic
 2016-08-26 09:19:36 +02:00
zmagod 2031c42920 fixed confirmation text 2016-08-26 09:13:45 +02:00
zmagod 1738ca66d2 one-time introductory popup [fixes SCI-336] 2016-08-25 18:44:21 +02:00
Luka Murn 8018cff02e Merge pull request #103 from Ducz0r/bb_edit_delete_comments 
Edit&delete comments
 2016-08-25 17:18:48 +02:00
Zmago Devetak 1b21e55fea Merge pull request #100 from ZmagoD/zd_SCI_381 
Adds experiment and team to tag search resuls [fixes SCI-381]
 2016-08-25 15:43:50 +02:00
zmagod 8ff645fb89 disabled experiment dropdown actions 2016-08-25 15:16:51 +02:00
Zmago Devetak b090fd8d5b Merge pull request #95 from ZmagoD/zd_SCI_374 
adds edit workflow link if no workflow [fixes SCI-374]
 2016-08-25 14:07:33 +02:00
Luka Murn 6d86a02d7c Add individual permission checks in dropdowns 
Closes SCI-258.
 2016-08-25 13:51:50 +02:00
Luka Murn 24dd25d9f5 Add edit/delete result comment functionality 
Lessons learned during this fix:
Don't use dependant: :destroy on both ends of association
between 2 ActiveRecords, or you will run into stack overflow.
 2016-08-25 13:51:31 +02:00
Luka Murn bac0455435 Add edit&delete functionality to step comments 
This commit also:
* fixes a bug in permission_helper.rb,
* fixes comments.js a bit,
* adds 2 more re-renders of dropdown position calculations to canvas.js and projects/index.js.
 2016-08-25 13:51:31 +02:00
Luka Murn c92d016f65 Add edit&delete module/task comments functionality 
This required a minor fix of comments.js.
 2016-08-25 13:51:31 +02:00
Luka Murn f0d9cb96fa Add edit project comments functionality 2016-08-25 13:51:30 +02:00
Luka Murn 15c0baeee8 Add delete project comment functionality 
This commit also removes the old code from @bberic.
 2016-08-25 13:51:30 +02:00
Luka Murn 5569a1e6d2 Revert 2 files that contained no changes 2016-08-25 13:51:30 +02:00
scibb a76d82d188 delete and edit comments for projects, protocols, results, and workflow elements 2016-08-25 13:51:30 +02:00
zmagod 5fabe06b8d implement first time popup logic 2016-08-25 11:44:49 +02:00
Mojca Lorber 4a5d720724 change position of overview and samples 2016-08-25 11:19:53 +02:00
zmagod 1120ef1407 adds experiment and team to tag search resuls [fixes SCI-381] 2016-08-25 10:40:03 +02:00
mlorb c38a4e2614 Merge pull request #94 from mlorb/ml_sci_375 
add move experiment instructions [SCI-375]
 2016-08-25 09:45:16 +02:00
mlorb 0a066f436f Merge pull request #96 from mlorb/ml_sci_369 
buttons update on experiment overview [SCI-369]
 2016-08-25 08:54:16 +02:00
zmagod dbdbff12eb add experiment level tutorial step [fixes SCI-338] 2016-08-24 19:03:58 +02:00
Mojca Lorber 2a897432e1 update buttons on canvas view 2016-08-24 17:00:27 +02:00
jbargu 5c104ac050 Merge pull request #93 from jbargu/jg_sci_378_move_experiment_error 
Fix 404 move experiment error
 2016-08-24 16:35:29 +02:00
Zmago Devetak 0de7ea31ea Merge pull request #90 from ZmagoD/zd_SCI_376 
fixes cloned experiment protocol [fixes SCI-376]
 2016-08-24 14:12:19 +02:00
zmagod 9393a96302 adds edit workflow link if no workflow [fixes SCI-374] 2016-08-24 14:10:50 +02:00
Mojca Lorber 0558d49e26 buttons update on experiment overview 2016-08-24 13:50:25 +02:00
Jure Grabnar 00da7efb44 Merge remote-tracking branch 'origin/jg_SCI_328_moving_workflows' 
Conflicts:
	app/models/experiment.rb

SCI-328 #close
 2016-08-24 13:11:10 +02:00
Zmago Devetak afaeab492d Merge pull request #87 from ZmagoD/zd_SCI_371 
hide the dropdown if user has no permissions(technician) [fixes SCI-371]
 2016-08-24 11:56:29 +02:00
jbargu 180efac87b Merge pull request #92 from jbargu/jg_exp_overview_navbar_sci_353 
Show whole tree structure for experiment in sidebar
 2016-08-24 11:50:39 +02:00
Mojca Lorber f554dc6018 add move experiment instructions 2016-08-24 11:36:50 +02:00
Jure Grabnar 3e5e9aed22 Fix 404 on move experiment 
[fixes SCI-378]
 2016-08-24 11:09:03 +02:00
zmagod 27d77bc73f added new permission for dropdown actions 2016-08-24 10:56:30 +02:00
Jure Grabnar e60533af57 Add whole tree structure for experiment 
SCI-353 #close
 2016-08-24 10:47:30 +02:00
Jure Grabnar a41d851830 Fix secondary navigation for experiment level (overview) 2016-08-24 08:54:02 +02:00
Zmago Devetak 9dc7708b73 Merge pull request #85 from ZmagoD/zd_SCI_360 
fixes project overview style and add no description link [fixes SCI-360]
 2016-08-23 16:24:22 +02:00
Zmago Devetak d67997fa8b Merge pull request #83 from ZmagoD/zd_SCI_347 
Fixes search result link for experiment [fixes SCI-347]
 2016-08-23 16:23:41 +02:00
Zmago Devetak aa650bbc65 Merge pull request #82 from ZmagoD/zd_SCI_359 
Add plus button at the bottom of project overview page [fixes SCI-359]
 2016-08-23 16:23:20 +02:00
Zmago Devetak 7e2db66f42 Merge pull request #79 from ZmagoD/zd_SCI_345 
Adds font-awesome to pdf [fixes SCI-345]
 2016-08-23 16:22:30 +02:00
zmagod 0429816154 deleted commented code 2016-08-23 16:21:11 +02:00
zmagod 2bbb439745 fixes cloned experiment protocol [fixes SCI-376] 2016-08-23 16:15:45 +02:00
Jure Grabnar 0d56cea3e4 Add placeholders for empty experiments 2016-08-23 10:37:48 +02:00
Jure Grabnar 358f2b1c47 Add moving for newly created modules 2016-08-23 10:00:34 +02:00
zmagod f918746946 hide the dropdown if user has no permissions(technician) [fixes SCI-371] 2016-08-23 09:26:52 +02:00
zmagod 03a3759cf5 fixes project overview style and add no description link [fixes SCI-360] 2016-08-23 08:52:53 +02:00
zmagod 9a05935067 fixed search result link for experiment [fixes SCI-347] 2016-08-22 15:35:47 +02:00
zmagod bb11999566 adds plus button at the bottom of project overview page [fixes SCI-359] 2016-08-22 15:22:05 +02:00
zmagod eab05eb9db adds font-awesome to pdf [fixes SCI-345] 2016-08-22 14:40:09 +02:00
zmagod d38f29d207 set ajax loading of experiments images [fixes SCI-349] 2016-08-22 11:29:19 +02:00
Jure Grabnar 5bb99adb25 Add frontend logic for moving workflows from canvas 2016-08-19 17:11:17 +02:00
zmagod cac5033eba set ajax for workflow img 2016-08-19 15:36:12 +02:00
Jure Grabnar 80498260e5 Add backend for moving task from canvas 2016-08-19 13:53:43 +02:00
zmagod 6bb8d075e0 truncate asset name in task step and result [fixes SCI-294] 2016-08-18 09:22:12 +02:00
Zmago Devetak 4897e2da0c Merge pull request #68 from ZmagoD/zd_SCI_330 
Zd sci 330
 2016-08-18 08:10:20 +02:00
Zmago Devetak f2e08db106 Merge pull request #67 from ZmagoD/zd_SCI_337 
Zd sci 337
 2016-08-18 08:06:38 +02:00
Matej Zrimšek 27a9dac412 File permissions corrected, with some refactoring. 2016-08-17 18:23:24 +02:00
Matej Zrimšek ccdccc5cf1 Changed file uploding to work properly with multiple files and be user friendly in case of errors. Some function names refactoring. 2016-08-17 18:11:13 +02:00
Matej Zrimšek 951cf67b3d A lot of file uploading edge cases considered. File uploading is now actually redirected to S3 server, as before was not. Error functions changed and error output format specified, which should be used consistently throughout the application. Some other refactoring. 2016-08-17 18:08:21 +02:00
Matej Zrimšek 01aad1764c Some hotfixes to previous commit. Client-side file validation added (except file type validation). Some refactoring. 2016-08-17 17:54:45 +02:00
Matej Zrimšek e2f94caa96 Step creation is now completelly validated on client-side also, to avoid front-end problems after server-side validation. This was needed as lots of issues were caused by this. Also step creation user experience is enriched and refactoring of related code was done. 2016-08-17 17:54:06 +02:00
Jure Grabnar 0cdea0b51a Add modal for moving task on canvas 2016-08-17 15:46:30 +02:00
zmagod 9fd68c7bd5 fixes 'new experiment' button bug on smaller screens 2016-08-17 14:27:59 +02:00
zmagod ca0ba1403d set flask icon to experiment [fixes SCI-330] 2016-08-17 14:17:29 +02:00
zmagod cc2ed32ccb fixes canvas bug when no actions are available for the viewer 2016-08-17 13:29:22 +02:00
zmagod 8d69ca0b88 adds active class to experiment name in sidebar [fixes SCI-331] 2016-08-17 11:21:48 +02:00
Zmago Devetak da735a51f4 Merge pull request #62 from ZmagoD/zd_SCI_318 
Zd sci 318
 2016-08-17 10:01:10 +02:00