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9898 commits 70 branches 179 tags 165 MiB
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724 commits

Author SHA1 Message Date
aignatov-bio 3eb2c98cce
Update render permission for smart annotation [SCI-6112] (#3571) 2021-10-01 14:23:29 +02:00
artoscinote 63923f0e63
Skip inaccessible elements when generating reports [SCI-6109] (#3569) 2021-10-01 14:18:40 +02:00
artoscinote f68d724202
Rework experiment permissions [SCI-6054] (#3538) 
* Rework experiment permissions [SCI-6054]
 2021-09-30 11:32:11 +02:00
Martin Artnik 7e6ca3be8a Merge branch 'develop' into features/new_permissions 2021-09-06 10:33:32 +02:00
Martin Artnik 1b26a4f65a Added access token to protocols.io requests [SCI-5968] 2021-08-26 15:26:35 +02:00
Martin Artnik 56576960b0 Rework molecule registration activities [SCI-5999] 2021-08-13 15:15:45 +02:00
Martin Artnik 861be4bb35 Fix issues with BioEddie integration [SCI-5982] 2021-08-11 09:50:00 +02:00
Martin Artnik 8f3f39f7c7 Fixed handling of activity subject parents when matching activity filters [SCI-5973] 2021-08-06 13:43:30 +02:00
Martin Artnik 57d5e6c2a7 Merge branch 'develop' into features/barcodes 2021-08-03 13:36:36 +02:00
artoscinote f839cb5256
Merge pull request #3464 from biosistemika/features/bioeddie-integration 
Features/bioeddie integration
 2021-08-03 13:32:53 +02:00
artoscinote c41247a5fd
Merge pull request #3439 from artoscinote/ma_SCI_5879 
Implement Save & Register molecule [SCI-5879]
 2021-08-03 12:15:46 +02:00
Martin Artnik a82af505eb Merge branch 'develop' into features/webhooks 2021-08-02 16:22:52 +02:00
Martin Artnik 0f417f9730 Merge branch 'develop' into features/barcodes 2021-07-29 13:32:17 +02:00
Martin Artnik 67f4e81a3a Merge branch 'develop' into features/new_permissions 2021-07-28 15:16:47 +02:00
Martin Artnik e57132dbd0 Added print job queue system, job status endpoint [SCI-5903] 2021-07-27 15:26:18 +02:00
Martin Artnik 53e072f79e Added error handling to API wrapper [SCI-5939] 2021-07-27 10:36:06 +02:00
Martin Artnik 61919e81b6 Remove FLUICS API client hack [SCI-5939] 2021-07-27 09:41:51 +02:00
Martin Artnik b32b207f3d Added FLUICS API client [SCI-5939] 2021-07-23 13:52:28 +02:00
Martin Artnik 662370d2bd Removed auto-disable, fixed ActiveJob + DelayedJob retry handling [SCI-5800] 2021-07-22 13:43:36 +02:00
Martin Artnik 4bb080c25b Merge migrations, code fixes [SCI-5800] 2021-07-22 10:51:03 +02:00
Martin Artnik 04b94d504d Moved activity logging to controller [SCI-5879] 2021-07-22 09:52:04 +02:00
Alex Kriuchykhin dfa2a7775d
Merge pull request #3422 from okriuchykhin/ok_SCI_5847 
Fix repository cell joining and preloading [SCI-5847]
 2021-07-21 13:18:21 +02:00
Alex Kriuchykhin dbc54278b2
Merge pull request #3211 from okriuchykhin/ok_SCI_5531 
Add basic API client for BMT [SCI-5531]
 2021-07-21 13:13:52 +02:00
Oleksii Kriuchykhin 36708b47cf Fix code styling [SCI-5531] 2021-07-21 13:10:30 +02:00
artoscinote 888131a465
Merge branch 'features/bioeddie-integration' into ma_SCI_5879 2021-07-20 09:48:13 +02:00
aignatov-bio 53456988ba
Add bioEddie activities and user licenses [SCI-5845][SCI-5842] (#3411) 
* Add bio eddie licens to users [SCI-5845]

* Add activities for BioEddie [SCI-5842]
 2021-07-19 21:33:28 +02:00
artoscinote 5f9c04844f
Added prefixed IDs to repository rows (items) [SCI-5909] (#3441) 
* Added prefixed IDs to repository rows (items) [SCI-5909]

* Fix prefixed id queries to work with joins, use subquery in repository search [SCI-5909]

* Fixed accessing repository_row parent code [SCI-5909]

* Better handling of repository_row code display [SCI-5909]

* Fix index warning for id prefixed models issue setting up project [SCI-5909]
 2021-07-19 14:23:36 +02:00
Martin Artnik 96a5b97bdb Implement Save & Register molecule [SCI-5879] 2021-07-15 12:37:04 +02:00
Oleksii Kriuchykhin 549fc8e5a0 Fix repository cell joining and preloading [SCI-5847] 2021-07-07 17:43:51 +02:00
Oleksii Kriuchykhin d1208bad0b Merge branch 'develop' into features/new_permissions 2021-07-07 13:44:36 +02:00
Martin Artnik 3662365cac Small code style tweak SCI-5800 2021-06-30 13:15:08 +02:00
Martin Artnik 618f5cfb53 Code style fixes [SCI-5800] 2021-06-30 13:08:16 +02:00
artoscinote 723b594632
Merge pull request #3398 from artoscinote/ma_SCI_5828 
Expose experiment IDs in interface and reports [SCI-5828]
 2021-06-30 12:58:25 +02:00
Martin Artnik b623e2f40f Report generation fixes [SCI-5851] 2021-06-29 13:46:45 +02:00
aignatov-bio 786e74e4de
Add BioEddie integration [SCI-5654][SCI-5657][SCI-5658][SCI-5670] (#3391) 
* Add backend for bioeddie [SCI-5654]

* Add modal for bioeddie [SCI-5654]

* Add bio eddie editor to steps and results [SCI-5654]

* Fix markup and code styling
 2021-06-23 19:48:44 +02:00
Martin Artnik d67d53b926 Code style fixes 2021-06-22 13:27:03 +02:00
Martin Artnik 66d2e65114 Fixed report docx generation [SCI-5837] 2021-06-21 12:52:12 +02:00
Martin Artnik 879cf5081d Added experiment code to experiment cards filter [SCI-5829] 2021-06-18 14:38:07 +02:00
Martin Artnik afc1b2d8b6 Added experiment code to PDF and DOCX [SCI-5830] 2021-06-18 14:14:02 +02:00
Oleksii Kriuchykhin bb458abec6 Remove old reports code [SCI-5650] 2021-06-18 10:40:00 +02:00
Martin Artnik c6648111f3 Code style fixes [SCI-5800] 2021-06-17 22:00:13 +02:00
Oleksii Kriuchykhin 1e3197875c Fix repositories selection in report wizard and deleted repositories handling [SCI-5831] 2021-06-17 16:23:27 +02:00
Martin Artnik 47071e23a1 Added specs for webhooks 2021-06-17 14:54:30 +02:00
Alex Kriuchykhin 4caa5f9ac1
Merge pull request #3394 from okriuchykhin/ok_SCI_5776_v2 
Fix repository snapshots for export all [SCI-5776]
 2021-06-17 11:35:16 +02:00
Martin Artnik 4ee50f87d5 Implement webhook service and scheduling jobs [SCI-5801, SCI-5802] 2021-06-17 09:19:04 +02:00
Oleksii Kriuchykhin 85a5cca98a Fix repository snapshots for export all [SCI-5776] 2021-06-16 16:17:12 +02:00
aignatov-bio 12d8b84cfd
Fix snapshots for deleted inventory [SCI-5826] (#3393) 2021-06-16 15:23:34 +02:00
aignatov-bio 7313b5fa16
Add archived and deleted repositories to reports [SCI-5781] (#3387) 
* Add archived and deleted repositories to reports [SCI-5781]

* Small markup fix [SCI-5781]
 2021-06-16 10:56:08 +02:00
Martin Artnik 6cf9ea5bc0 Implement Activity -> ActivityFilter matching service [SCI-5800] 2021-06-15 16:13:28 +02:00
aignatov-bio 9103fcf356
Add project header to reports [SCI-5798] (#3380) 2021-06-14 12:42:18 +02:00