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5939 commits 77 branches 180 tags 167 MiB
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1320 commits

Author SHA1 Message Date
Oleksii Kriuchykhin
a6b80589f2 Fix default order of the columns in repositories [SCI-1445] 2017-07-10 15:32:18 +02:00
Luka Murn
3e80f761b8 Add "about" modal, prepare hooks, VERSION system for addons 
Also the addon generator is fixed so it properly creates VERSION
file for new addons.
 2017-07-10 15:27:50 +02:00
Luka Murn
9f60ece25f Merge branch 'master' into rails-5.1 
Conflicts:
	app/models/repository.rb
	app/models/repository_row.rb
	app/views/projects/index.html.erb
	app/views/shared/_secondary_navigation.html.erb
 2017-07-06 15:12:15 +02:00
Zmago Devetak
53a1dd14b7 Merge pull request #718 from ZmagoD/zd_SCI_1129_v3 
Fixes error message [fixes SCI-1129]
 2017-07-04 11:16:36 +02:00
Oleksii Kriuchykhin
4c6690e59b Fix ordering of the columns after adding the new ones [SCI-1445] 2017-07-03 11:53:15 +02:00
Oleksii Kriuchykhin
5c39b90b2d Fix activities button misbehaviour with turbolinks [SCI-1412] 2017-06-30 16:33:52 +02:00
Oleksii Kriuchykhin
e474cda03a Fix activities [SCI-1412] 2017-06-28 16:49:50 +02:00
zmagod
a9f38962bc Fixes error message [fixes SCI-1129] 2017-06-28 11:17:50 +02:00
mz3944
ca59ac5e36 Merge pull request #714 from mz3944/mz-SCI-1402 
Missing error message when not selecting name in case of import repository file [SCI-1402]
 2017-06-27 11:54:26 +02:00
Oleksii Kriuchykhin
938896981d Remove spinner after samples import error [SCI-1399] 2017-06-26 16:51:58 +02:00
Matej Zrimšek
f847b44067 Error is displayed and import is prevented in case repository name column is not mapped, when importing repository items from file. [SCI-1402] 2017-06-26 16:50:40 +02:00
zmagod
75507107fd migrate to 4.2.9 2017-06-23 08:50:12 +02:00
zmagod
1690d8ebe3 removed reload on hide modal 2017-06-22 16:47:50 +02:00
zmagod
a2e1aa5b36 fixes bug with long text in parse records modal [fixes SCI-1392] 2017-06-22 14:43:01 +02:00
zmagod
28129ebb73 refactor 2017-06-21 17:39:20 +02:00
zmagod
bad52ceff1 Merge branch 'master' of https://github.com/biosistemika/scinote-web into zd_SCI_1336 2017-06-21 15:56:07 +02:00
mz3944
568e41f5fa Merge pull request #701 from mz3944/mz-SCI-1383 
Removed empty first column of repository export file [SCI-1383]
 2017-06-21 10:57:46 +02:00
mz3944
d19bfc8fd8 Merge pull request #700 from mz3944/mz-SCI-1386 
Fixed tooltip not showing on mouse over truncated cell text [SCI-1386]
 2017-06-21 10:40:37 +02:00
Matej Zrimšek
47407ef40c Removed empty first column of repository export file. [SCI-1383] 2017-06-20 18:40:41 +02:00
Matej Zrimšek
ce97d18e78 Fixed tooltip not showing on mouse over truncated cell text. [SCI-1386] 2017-06-20 17:51:51 +02:00
Matej Zrimšek
d49524a26f Set correct repository icon on reports and done some needed refactoring with this. [SCI-1378] 2017-06-20 16:10:50 +02:00
mlorb
14429a270c Merge pull request #689 from mlorb/ml_sci_1354 
Truncate and display text in tooltip in custom repository fields [SCI-1354]
 2017-06-19 15:50:38 +02:00
Mojca Lorber
730c4738d5 fix tooltip in edit mode 2017-06-19 15:49:31 +02:00
Mojca Lorber
39dd6daabb small fixes 2017-06-19 15:30:38 +02:00
mlorb
122ac7971f Merge pull request #692 from mlorb/ml_sci_1348 
Fix cog position on repositories page [SCI-1348]
 2017-06-19 15:16:01 +02:00
mlorb
9a7669bf2a remove empty line 2017-06-19 15:15:27 +02:00
zmagod
70fa681519 split the import service 2017-06-19 14:05:37 +02:00
Mojca Lorber
9b941fe374 fix flash when deleting samples of other users 2017-06-16 17:12:04 +02:00
Mojca Lorber
b6f146f177 fix cog position on repositories page 2017-06-16 11:54:31 +02:00
Oleksii Kriuchykhin
94d74b8101 Make assigned column always visible in repositories [SCI-1346] 2017-06-16 11:47:41 +02:00
Mojca Lorber
a195c9a5af truncate and display text in tooltip in custom repository fields 2017-06-15 15:08:33 +02:00
zmagod
5d6fba7153 fixes bug with sorting columns [fixes SCI-1371] 2017-06-14 17:35:41 +02:00
zmagod
2d3b5f4308 refactor 2017-06-14 10:55:24 +02:00
okriuchykhin
da87a41c86 Merge pull request #680 from okriuchykhin/ok_SCI_1365 
Remove row selection after assign/unassign in repositories [SCI-1365]
 2017-06-14 10:19:09 +02:00
zmagod
6dd85d6c39 fixes drag'n drop bug in results on safari [fixes SCI-1370] 2017-06-14 09:45:49 +02:00
zmagod
cee052fc19 added service object 2017-06-14 09:11:20 +02:00
Mojca Lorber
849b269d87 fix errors in repo table 2017-06-13 16:56:34 +02:00
Oleksii Kriuchykhin
2e98433abc Remove row selection after assign/unassign in repositories [SCI-1365] 2017-06-13 16:56:28 +02:00
Zmago Devetak
f3f1a68070 Merge pull request #667 from ZmagoD/zd_SCI_1338 
fixes long column names in repository dropdown [fixes SCI-1338]
 2017-06-13 09:33:04 +02:00
okriuchykhin
d88de4009a Merge pull request #674 from okriuchykhin/ok_SCI_1346 
Fix reordering columns to the first position [SCI-1346]
 2017-06-13 09:01:10 +02:00
okriuchykhin
56c3b891a5 Merge pull request #673 from okriuchykhin/ok_SCI_1350 
Fix row selection info after record deletion [SCI-1350]
 2017-06-13 09:00:48 +02:00
okriuchykhin
05c77e7298 Merge pull request #672 from okriuchykhin/ok_SCI_1341 
Fix row selecton after column reorder in repositories [SCI-1341]
 2017-06-13 09:00:33 +02:00
Matej Zrimšek
e3db79b3cc Added repository permissions check when exporting repository records. Minor repositories refactoring and code style fixing. [SCI-1275] 2017-06-12 17:49:42 +02:00
Oleksii Kriuchykhin
248fd7be06 Fix reordering columns to the first position [SCI-1346] 2017-06-12 17:16:49 +02:00
Oleksii Kriuchykhin
c081cda5f3 Fix row selection info after record deletion [SCI-1350] 2017-06-12 10:23:18 +02:00
Oleksii Kriuchykhin
aa42ca6b8b Fix row selecton after column reorder in repositories [SCI-1341] 2017-06-12 10:07:16 +02:00
Matej Zrimšek
514aa6214b Repository records minor JS refactoring. [SCI-1275] 2017-06-09 19:44:28 +02:00
Matej Zrimšek
29b721365a Moved export form to proper place in the code. [SCI-1275] 2017-06-09 19:44:28 +02:00
rekonder
4df8e1ffe3 Fixed bugs with duplicated generated csv, toggle columns and exportig right columns of selected repository 2017-06-09 19:44:28 +02:00
rekonder
ede744849b Export repository [aj-SCI-1275] 2017-06-09 19:44:28 +02:00
Luka Murn
e26337d5ee Merge pull request #671 from biosistemika/custom-repositories 
Merge custom-repositories into master
 2017-06-09 18:46:47 +02:00
zmagod
d1977d0773 fixes long column names in repository dropdown [fixes SCI-1338] 2017-06-09 11:42:38 +02:00
Zmago Devetak
4873624cec Merge pull request #658 from ZmagoD/zd_SCI_1011 
Multiple file upload with drag & drop capability in steps and results
 2017-06-09 10:03:33 +02:00
zmagod
33b996ffee refactor 2017-06-09 09:49:57 +02:00
Luka Murn
7bb1af3692 Minor JS fix 2017-06-08 15:28:26 +02:00
Mojca Lorber
0004c2b7d5 fix selection of tab after redirection 2017-06-08 14:17:27 +02:00
Mojca Lorber
71c523c406 load tabs with javascript 2017-06-08 13:47:30 +02:00
Luka Murn
2ab31aba2f Merge pull request #660 from Ducz0r/lm-sci-1270 
Copy repository functionality [SCI-1270]
 2017-06-08 11:45:57 +02:00
Luka Murn
27feb46d8f Merge pull request #659 from Ducz0r/lm-sci-1279 
Include repositories in reports [SCI-1279]
 2017-06-08 11:24:21 +02:00
Luka Murn
38361e4bb4 Setup initial GUI 2017-06-07 18:43:48 +02:00
Matej Zrimšek
77a225ec31 Added toggle between assigned and all repository records. [SCI-1276] 2017-06-07 18:13:25 +02:00
Luka Murn
02dd6636ba Allow saving & editing of reports with repository elements 
Closes SCI-1279.
 2017-06-07 16:55:00 +02:00
Luka Murn
b5f6d1da94 Allow custom repositories to be added to reports 2017-06-07 16:54:32 +02:00
Oleksii Kriuchykhin
ad8dd6d740 PR fixes [SCI-1274] 2017-06-07 15:23:25 +02:00
Oleksii Kriuchykhin
8b1190060e Add custom repository table [SCI-1274] 2017-06-07 15:23:25 +02:00
Zmago Devetak
fcec42ae31 Merge pull request #645 from ZmagoD/zd_SCI_1278 
generates samples csv file in background job [fixes SCI-1278]
 2017-06-07 15:04:24 +02:00
zmagod
c6bb20039b adds drag'n drop feature in task results [fixes SCI-1011], [fixes SCI-1310] and [fixes SCI-285] 2017-06-07 13:29:39 +02:00
Mojca Lorber
51c4eeb106 renaming 2017-06-06 15:50:43 +02:00
Mojca Lorber
39dda1ad5d refactoring 2017-06-06 13:18:44 +02:00
ajugo
887d9a4f52 Samples - show all/show assigned [SCI-1277] (#644) 
* Samples - show all/show assigned [SCI-1277]

* Some fixes in code

* Some minor fixes in code

* Omit present

* Correct missed present

* Fixing hound warnings
 2017-06-06 12:46:56 +02:00
Mojca Lorber
da98788031 small code fixes 2017-06-06 09:57:50 +02:00
Mojca Lorber
13bf4ad229 create new repository 2017-06-06 09:54:39 +02:00
Luka Murn
f382c04f01 Refactor JS code a bit 
Closes SCI-1323.
 2017-06-06 08:02:01 +02:00
Luka Murn
1712fc0611 Fix bug with protocol preview modal not working in protocol repo 
Closes SCI-1323.
 2017-06-05 17:10:13 +02:00
Matej Zrimšek
2c6ad4aa05 Refactored modal popups for repositories to make them general. [fix 1269] 2017-06-05 14:13:24 +02:00
zmagod
ab4961ddb1 adds overlay partial 2017-06-05 11:31:05 +02:00
zmagod
67d902db52 refactor 2017-06-05 10:43:58 +02:00
Matej Zrimšek
d8d54232c3 After repository renaming user is redirected to the same repository. Removed the unimplemented repository copy dropdown option. [SCI-1269] 2017-06-02 19:08:51 +02:00
Matej Zrimšek
c82fd66146 Removed unneeded utility JS function. [SCI-1269] 2017-06-02 17:52:04 +02:00
Matej Zrimšek
f8258812ef Repository remove and rename refactoring. [SCI-1269] 2017-06-02 17:50:34 +02:00
Matej Zrimšek
21a72da84f Added rename logic and improved remove logic. [SCI-1269] 2017-06-02 17:50:34 +02:00
Matej Zrimšek
cdaac6a01b Added remove repository modal logic. [SCI-1269] 2017-06-02 17:50:33 +02:00
Matej Zrimšek
791bb934ca Remove repository modal logic (WIP). [SCI-1269] 2017-06-02 17:50:33 +02:00
zmagod
1c021b11db adds drag and drop files upload to steps [fixes SCI-1310] 2017-06-02 16:34:09 +02:00
ajugo
a9bd86352d Step: wrong last columns of table [fixes SCI-405] (#600) 
* Step: wrong last two columns of table after add table results [fixes SCI-405]

* Changing double quotes to single

* Adding empty line back
 2017-06-01 15:52:02 +02:00
zmagod
b527afd12b generates samples csv file in background job [fixes SCI-1278] 2017-05-29 14:42:55 +02:00
Zmago Devetak
1df6265326 Merge pull request #627 from ZmagoD/zd_SCI_1280 
prevent to duplicate new step [fixes SCI-1280]
 2017-05-29 09:55:22 +02:00
zmagod
5806cb8e67 removes unneeded animateSpinner call 2017-05-29 09:10:11 +02:00
mz3944
9fe3b717c8 Merge pull request #626 from mz3944/mz-SCI-487 
Simplify "Add contents to report" popup
 2017-05-23 09:57:39 +02:00
ajugo
1abaefce4f At importing large sample file, error flash message appears [fixes SCI-903] (#625) 
* At importing large sample file, error flash message appears [fixes SCI-903]

* Changing double quotes to single

* Adding animatedSpinner
 2017-05-18 09:19:44 +02:00
Matej Zrimšek
20265ddd69 Readded result content modal for report creation and updated checkbox hierarchy logic accordingly. [fixes SCI-487] 2017-05-17 18:18:57 +02:00
Oleksii Kriuchykhin
bbf6d38c50 Fix error handling in result_assets [SCI-1288] 2017-05-17 15:14:35 +02:00
zmagod
b21923cf98 prevent to duplicate new step [fixes SCI-1280] 2017-05-16 11:52:07 +02:00
Matej Zrimšek
79ec3b5e4c Selected all checkboxes by default for result content adding modal and added disabling logic for dependent checkboxes. [fixes SCI-487] 2017-05-15 18:20:42 +02:00
Matej Zrimšek
901558c733 Made checkbox logic sitewide available and applied it to other content adding modals in report aswell. [fixes SCI-487] 2017-05-15 18:20:42 +02:00
Matej Zrimšek
ba693c65a8 Fixed adding contents to report logic and removed unneeded code. [fixes SCI-487] 2017-05-15 18:20:42 +02:00
zmagod
9bec7dd96e Merge branch 'master' of https://github.com/biosistemika/scinote-web into zd_SCI_1248 2017-05-15 14:49:37 +02:00
zmagod
d34b2520b5 refactor results javascript, fixes bug with results archive [fixes SCI-1262] prevents duplicate request [fixes SCI-1248] 2017-05-12 15:59:58 +02:00
zmagod
070a829c49 change new results hendlers 2017-05-12 10:02:33 +02:00
zmagod
81a3cb0a41 adds results js code in modules 2017-05-11 16:54:28 +02:00
mlorb
219921ee33 Merge pull request #612 from mlorb/ml_sci_1250 
Fix sample page bugs when editing column name [SCI-1250]
 2017-05-11 13:48:20 +02:00
okriuchykhin
328c9292b1 Merge pull request #606 from okriuchykhin/ok_SCI_1235 
Fix error messages display during file upload in steps and results [SCI-1235]
 2017-05-11 13:00:36 +02:00
Mojca Lorber
86bc6adc2a fix lost column updated name at sample page and bug with another user not able to view column dropdown 2017-05-11 11:16:12 +02:00
zmagod
2081e0a94b Merge branch 'master' of https://github.com/biosistemika/scinote-web into release-1.10.1 2017-05-10 15:14:17 +02:00
zmagod
a4032f5cc6 first run 2017-05-10 13:53:32 +02:00
Oleksii Kriuchykhin
52ad5ecdc2 Fix error messages display during file upload in steps and results [SCI-1235] 2017-05-09 17:13:47 +02:00
okriuchykhin
ccc640f2bc Merge pull request #593 from okriuchykhin/ok_SCI_1158 
Add advanced search options [SCI-1158]
 2017-05-09 10:23:34 +02:00
okriuchykhin
bd0b930382 Merge pull request #598 from okriuchykhin/ok_SCI_152 
Add counters for users and comments on canvas [SCI-152]
 2017-05-09 10:22:53 +02:00
Oleksii Kriuchykhin
bd5a48b9c8 Improve code style [SCI-1158] 2017-05-08 18:00:14 +02:00
Oleksii Kriuchykhin
344b9c290a Add counters for users and comments on canvas [SCI-152] 2017-05-08 17:32:55 +02:00
Zmago Devetak
4b816f5322 Merge pull request #568 from ZmagoD/zd_SCI_1119 
Add images to fields with rich text formatting
 2017-05-08 13:06:58 +02:00
Oleksii Kriuchykhin
0ee7e11620 Add advanced search options [SCI-1158] 2017-05-05 16:41:23 +02:00
mlorb
4c85ac7bf5 Merge pull request #588 from mlorb/ml_sci_191 
Add information how many samples are selected [SCI-191]
 2017-05-05 15:24:16 +02:00
Zmago Devetak
de3d1172c1 Merge pull request #584 from ZmagoD/zd_SCI_1200 
add popup for approval to complete the Task [fixes SCI-1200]
 2017-05-05 14:57:27 +02:00
Mojca Lorber
45baba1803 fix zmago the hound 2017-05-04 16:46:52 +02:00
Mojca Lorber
ad9497a638 add information how many samples are selected 2017-05-04 16:30:29 +02:00
zmagod
f784844472 fixes bug with empty checklist item [fixes SCI-1233] 2017-05-04 16:15:00 +02:00
zmagod
acc5594f1b add popup for approval to complete the Task [fixes SCI-1200] 2017-05-04 12:41:22 +02:00
Mojca Lorber
f8f6a5f63a fix bug edit canvas not working and fix positioning of cloned task/workflow 2017-05-04 10:54:50 +02:00
zmagod
5b58824ec0 refactor 2017-05-03 15:30:08 +02:00
ajugo
41df727e57 Merge pull request #569 from rekonder/aj-SCI-1130 
Fix error with close on reports
 2017-05-03 12:27:42 +02:00
ajugo
081aa4aea7 Merge pull request #570 from rekonder/aj-SCI-1088 
My profile - avatar size fix [SCI-1088]
 2017-05-03 12:27:05 +02:00
Matej Zrimšek
8ad52354eb Used locales instead of hardcoded values for intro.js tutorial popup. 2017-04-25 16:03:50 +02:00
Matej Zrimšek
e8bc9542cc Removed some unneeded intro.js tutorial code. 2017-04-25 16:03:50 +02:00
Matej Zrimšek
a6573bd508 Next button is now always focused when navigating through tutorial steps. [fixes SCI-719] 2017-04-25 16:03:50 +02:00
Matej Zrimšek
a5cffd06f3 Removed all tutorial data from ERB, so that all tutorial code is in JS. [needed for fixing SCI-719] 2017-04-25 16:03:50 +02:00
Mojca Lorber
49574e7a06 remove behavior of not allowing the empty tables in steps 2017-04-25 10:21:16 +02:00
rekonder
b93edac3b9 My profile - avatar size fixes [SCI-1088] 2017-04-25 10:02:00 +02:00
zmagod
66f43803c0 refactor, fix user annotation bug 2017-04-24 16:22:25 +02:00
rekonder
dc46a7b650 Fix error with close on reports 2017-04-24 16:02:30 +02:00
zmagod
55c8c498e2 add image upload functionality to result text 2017-04-24 12:28:27 +02:00
zmagod
550f563666 working version for steps first run 2017-04-21 16:09:04 +02:00
Mojca Lorber
cf00ecd62e new experiment redirection 2017-04-20 17:55:28 +02:00
zmagod
c25df63a14 add tinymce img importer and refactor input sanitize helper 2017-04-19 09:11:52 +02:00
okriuchykhin
3d805d529d Merge pull request #554 from okriuchykhin/ok_SCI_877 
Add image preview to protocol repository [SCI-877]
 2017-04-18 08:58:39 +02:00
mlorb
ddc0e86c92 Merge pull request #556 from mlorb/ml_sci_1174 
Fix bug with changing user own role from admin to normal user [SCI-1174]
 2017-04-13 14:33:58 +02:00
Zmago Devetak
ec60044949 Merge pull request #548 from ZmagoD/zd_SCI_1129_v2 
Disables annimateSpiner in result assets actions
 2017-04-13 14:06:50 +02:00
Mojca Lorber
27c661d7c4 fix bug with changing user own role from admin to normal user 2017-04-12 16:56:10 +02:00
Oleksii Kriuchykhin
181d981a51 Add image preview to protocol repository [SCI-877] 2017-04-12 16:05:38 +02:00
zmagod
929d8aab5e disables annimateSpiner in result assets actions 2017-04-10 15:40:36 +02:00
Zmago Devetak
91793c295a Merge pull request #542 from ZmagoD/zd_SCI_825 
Smart annotations and Notifications
 2017-04-10 15:10:17 +02:00
Luka Murn
becdd687a6 Only require jquery-ui-sortable on samples page 
(hopefully) closes SCI-794.
 2017-04-07 13:05:22 +02:00
okriuchykhin
aa776aaa71 Merge pull request #541 from okriuchykhin/ok_SCI_615 
Fix moving of the steps after adding a new one [SCI-615]
 2017-04-06 15:50:01 +02:00
zmagod
f16607579f refactor steps annotation 2017-04-06 13:03:13 +02:00
Oleksii Kriuchykhin
5c0197220d Fix moving of the steps after adding a new one [SCI-615] 2017-04-06 12:53:21 +02:00
Mojca Lorber
5e62046627 remove ERROR from message 2017-04-05 14:40:55 +02:00
mlorb
317739af1e Merge pull request #530 from biosistemika/ml_sci_1044 
Add data-hook and yadcf-filter plug-in [SCI-1044]
 2017-03-31 14:00:23 +02:00
Mojca Lorber
9458f391e5 add data-hook and yadcf-filter plug-in 2017-03-29 15:59:51 +02:00
zmagod
9ce95470b3 fixes alert messages in samples [fixes SCI-1135] 2017-03-28 15:14:05 +02:00
mlorb
3beb179f87 Merge pull request #514 from biosistemika/ml_sci_1089 
Add error messages to sample group/type edit/delete actions [SCI-1089]
 2017-03-27 09:57:32 +02:00
okriuchykhin
33544ec91d Merge pull request #521 from okriuchykhin/ok_SCI_1087 
Move flash message creation JS code to helper method [SCI-1087]
 2017-03-20 15:35:21 +01:00
Oleksii Kriuchykhin
c715902058 Move flash message creation JS code to helper method [SCI-1087] 2017-03-17 17:58:53 +01:00
Mojca Lorber
83fa8570d7 refactoring 2017-03-17 17:52:15 +01:00
zmagod
95a0f596b7 adds file link 2017-03-17 16:40:57 +01:00
zmagod
52878e0989 fixed wopi buttons [fixes SCI-1110] 2017-03-16 15:38:11 +01:00
Mojca Lorber
4792bd87b9 fix error message when editing custom column on locked task 2017-03-15 14:09:44 +01:00
Mojca Lorber
7a4e3201e7 add error messages to sample group/type edit/delete actions 2017-03-14 17:32:25 +01:00
zmagod
7b16e5643e fix assets preprocesor for wopi files 2017-03-13 13:20:49 +01:00
zmagod
0c2523beca Merge branch 'master' of https://github.com/biosistemika/scinote-web into office_integration 2017-03-10 16:21:43 +01:00
Luka Murn
800df7a26b Also make button icons work when rendering them via JS 
Closes SCI-1073.
 2017-03-08 13:55:10 +01:00
Luka Murn
42b773f180 Merge pull request #504 from Ducz0r/lm-sci-1078-fix 
Fix sample type groups edit color script [SCI-1078]
 2017-03-02 13:09:51 +01:00
Luka Murn
3599537e42 Fix sample type groups edit color script so it works properly now 
Closes SCI-1078.
 2017-03-01 09:09:44 +01:00
Luka Murn
2252b46afc Canvas should now properly work again 
Closes SCI-1057.
 2017-02-28 10:41:55 +01:00
zmagod
151dc79a81 adds hook for lock task action 2017-02-21 16:25:50 +01:00
okriuchykhin
8e18ff44a6 Merge pull request #479 from okriuchykhin/ok_SCI_999 
Add task complete/uncomplete functionality [SCI-999]
 2017-02-20 15:19:00 +01:00
Oleksii Kriuchykhin
218e96b1f0 Code style fixes [SCI-999] 2017-02-16 11:45:07 +01:00
Oleksii Kriuchykhin
cf8566df33 Add task complete/uncomplete functionality [SCI-999] 2017-02-10 14:27:20 +01:00
Luka Murn
f7bd62547e Refactor teams settings into its own controllers 2017-02-09 14:37:59 +01:00
Luka Murn
5cb3eb5e09 Refactor preferences -> move them to subcontroller, subroute 2017-02-09 11:07:16 +01:00
okriuchykhin
c2a69982aa Merge pull request #471 from okriuchykhin/ok_SCI_936 
Adds datatable to all teams page [SCI-936]
 2017-02-07 10:33:33 +01:00
Oleksii Kriuchykhin
80dbc669d0 Simplify all teams dt definition [SCI-936] 2017-02-06 17:17:48 +01:00
Oleksii Kriuchykhin
449f4479e9 Fix code style issues [SCI-936] 2017-02-06 17:08:20 +01:00
Oleksii Kriuchykhin
916ed2572a Fix smart annotation is missing at editing column with smart annotation [SCI-997] 2017-02-03 16:42:38 +01:00
Oleksii Kriuchykhin
62535a01bd Move teams datatable js code into separate file [SCI-936] 2017-02-03 10:44:42 +01:00
Oleksii Kriuchykhin
db90c5d63b Add datatable to all teams page [SCI-936] 2017-02-02 09:53:59 +01:00
Mojca Lorber
d3e0eca44e redesign individual team page 2017-02-01 14:44:47 +01:00
Zmago Devetak
5c9954bb89 Merge pull request #450 from ZmagoD/zd_SCI_939 
Refactor "organizations" to "teams"
 2017-02-01 13:12:02 +01:00
zmagod
be5faad97c fixes hound 2017-01-31 13:33:55 +01:00
okriuchykhin
9909f9dcff Merge pull request #456 from okriuchykhin/ok_SCI_951 
Fix missing preview images in task and protocol management [SCI-951]
 2017-01-27 14:42:41 +01:00
okriuchykhin
53e09bd50a Merge pull request #457 from okriuchykhin/ok_SCI_955 
Fix comments re-initialization after edit of the results [SCI-955]
 2017-01-27 11:50:52 +01:00
zmagod
e59b2e039a Merge branch 'master' of https://github.com/biosistemika/scinote-web into zd_SCI_939 2017-01-27 11:15:31 +01:00
Luka Murn
2c3be391a8 Merge pull request #462 from ZmagoD/zd_SCI_962_vol2 
fix edit action
 2017-01-26 17:25:57 +01:00
Luka Murn
36f25e98f1 Merge pull request #459 from okriuchykhin/ok_SCI_943 
Fix RTF toolbar init after eding new step [SCI-943]
 2017-01-26 17:25:41 +01:00
zmagod
30912c514e fix edit action 2017-01-26 17:24:24 +01:00
zmagod
cec5f1333d fixes RTE bug for new text results [fixes SCI-962] 2017-01-26 16:54:43 +01:00
Oleksii Kriuchykhin
100cc700c6 Fix RTF toolbar init after eding new step [SCI-943] 2017-01-26 16:37:44 +01:00
Oleksii Kriuchykhin
ff86184b24 Fix comments re-initialization after edit of the results [SCI-955] 2017-01-26 15:24:37 +01:00
Oleksii Kriuchykhin
0f860496a7 Fix image preview after saving of report [SCI-951] 2017-01-26 14:42:14 +01:00
Mojca Lorber
13d1cc5171 fix entering new smart anotations 2017-01-26 13:50:32 +01:00
zmagod
afd8328e9c rename ortanizations -> teams 2017-01-25 14:22:06 +01:00
Oleksii Kriuchykhin
ddd8bcf7b0 Prevent double initialization of popup [SCI-855] 2017-01-25 13:47:01 +01:00
Oleksii Kriuchykhin
96a9857dec Add handling of popups in the end of the table [SCI-855] 2017-01-25 13:47:01 +01:00
Oleksii Kriuchykhin
fb49ce8be2 Improved tooltip handling in samples datatable [SCI-855] 2017-01-25 13:47:01 +01:00
zmagod
8c035a1981 renames organization in assets 2017-01-25 12:12:27 +01:00
Oleksii Kriuchykhin
365eef506c Fixes merge conflicts with smart-annotations branch 2017-01-24 15:20:50 +01:00
mlorb
02f314ce60 Merge pull request #443 from mlorb/ml_sci_919_v2 
Remove table of content and customize link target [SCI-919]
 2017-01-24 14:39:47 +01:00
Luka Murn
53699193a2 Merge branch 'smart-annotations' 
Conflicts:
	app/assets/javascripts/comments.js.erb
	app/assets/javascripts/protocols/index.js
	app/assets/javascripts/protocols/steps.js.erb
	app/assets/javascripts/samples/sample_datatable.js.erb
	app/controllers/my_module_comments_controller.rb
	app/controllers/project_comments_controller.rb
	app/controllers/result_comments_controller.rb
	app/controllers/step_comments_controller.rb
	app/datatables/sample_datatable.rb
	app/views/my_module_comments/_comment.html.erb
	app/views/project_comments/_comment.html.erb
	app/views/projects/show/_experiment.html.erb
	app/views/reports/elements/_experiment_element.html.erb
	app/views/reports/elements/_result_comments_element.html.erb
	app/views/reports/elements/_result_text_element.html.erb
	app/views/reports/elements/_step_checklist_element.html.erb
	app/views/reports/elements/_step_comments_element.html.erb
	app/views/reports/elements/_step_element.html.erb
	app/views/result_comments/_comment.html.erb
	app/views/results/_result_text.html.erb
	app/views/step_comments/_comment.html.erb
	app/views/steps/_step.html.erb
	db/schema.rb
 2017-01-24 14:33:23 +01:00
Mojca Lorber
4dc7998fdd Remove table of content and customize link target 2017-01-24 13:10:01 +01:00
mlorb
4253e3de2b Merge pull request #439 from mlorb/ml_sci_919 
Remove functionalities from rich text formatting [SCI-919]
 2017-01-24 11:03:34 +01:00
Matej Zrimšek
b48e48e100 Prevent sample row in samples datatable from toggling when clicking on smart annotation link. [SCI-913] 2017-01-24 10:56:10 +01:00
Matej Zrimšek
2e041d9e81 Added smart annotations when adding new sample in samples table. [SCI-913] 2017-01-24 10:23:26 +01:00
Mojca Lorber
eb40513ada remove functionalities from rich text formatting 2017-01-24 09:44:37 +01:00
Oleksii Kriuchykhin
401b37956b Simplify protocol export start [SCI-742] 2017-01-23 17:43:48 +01:00
Oleksii Kriuchykhin
d555ba7905 Add export to protocol management page and code style improvements [SCI-742] 2017-01-23 17:43:48 +01:00
Oleksii Kriuchykhin
14a6705b55 Implemented protocol export through Zip::OutputStream [SCI-742] 2017-01-23 17:43:48 +01:00
zmagod
9c3bc8dac7 fixes checklist item user popover bug [fixes SCI-907] 2017-01-23 09:47:04 +01:00
mz3944
fd63a1de12 Merge pull request #432 from mlorb/ml-sci-fix-847 
Add dynamic length for sample type/group field when adding new sample [SCI-847]
 2017-01-20 15:46:34 +01:00
mz3944
18a2e4c423 Merge pull request #433 from mz3944/mz-sci-914 
Edit of a sample in sample table does not work
 2017-01-20 13:02:05 +01:00
Zmago Devetak
c1e7cc83a7 Merge pull request #434 from ZmagoD/zd_SCI_915 
Text is deleted when entering smart annotation in rich text editor
 2017-01-20 13:01:29 +01:00
Zmago Devetak
7bd368e002 Merge pull request #431 from ZmagoD/zd_add_code_highlight 
Fixes code highlight and smart annotations experiments bug
 2017-01-20 12:59:21 +01:00
zmagod
71453398b1 bugfix 2017-01-20 11:33:49 +01:00
zmagod
4f7d62e79d removes unneeded annotations [fixes SCI-915] 2017-01-20 11:33:10 +01:00
Matej Zrimšek
5d65627808 Fixed sample editing in samples table. [SCI-914] 2017-01-20 11:10:17 +01:00
Mojca Lorber
3789769af3 add dynamic length for sample type/group field when adding new sample 2017-01-20 09:53:44 +01:00
zmagod
9550c6dd35 fixes highlight.js 2017-01-19 17:09:25 +01:00
Matej Zrimšek
54f8b01341 Removed smart annotation filter button disabling, when no results are found for that filter (so that 'no result found' displays instead). [SCI-894] 2017-01-19 15:26:28 +01:00
Oleksii Kriuchykhin
890c5e3c3d Add “no results found” message in smart annotation [SCI-886] 2017-01-19 13:42:58 +01:00
Zmago Devetak
039a8d7da6 Merge pull request #426 from ZmagoD/zd_add_tinyMCE 
Add tiny mce
 2017-01-19 12:57:55 +01:00
zmagod
2cbb8ba41a removed unneeded comments 2017-01-19 12:54:48 +01:00
mz3944
da604d2619 Merge pull request #427 from mz3944/mz-sci-908 
Some smart annotations refactoring [SCI-908]
 2017-01-19 12:15:20 +01:00
zmagod
f2d5066dc7 fix some bugs 2017-01-19 11:37:59 +01:00
Matej Zrimšek
5d86bbb812 Smart annotations improved documentation. [SCI-908] 2017-01-19 10:56:02 +01:00
Matej Zrimšek
fec83e8c45 Smart annotations refactoring. [SCI-908] 2017-01-19 10:55:43 +01:00
zmagod
2ccafdd670 bug fix 2017-01-19 10:12:01 +01:00
zmagod
27d3868f37 fix bugs 2017-01-19 09:40:39 +01:00
zmagod
88d7cb200e removed quill 2017-01-18 23:06:14 +01:00
zmagod
65fa631b1c adding tinyMce first run 2017-01-18 22:40:08 +01:00
okriuchykhin
18d329fb42 Merge pull request #423 from okriuchykhin/ok_SCI_896 
Make search work for full names in smart annotations [SCI-896]
 2017-01-18 17:58:52 +01:00
Oleksii Kriuchykhin
6555fd02b6 Make search work for full names in smart annotations [SCI-896] 2017-01-18 16:57:51 +01:00
mz3944
b5e38afb64 Merge pull request #416 from mz3944/mz-sci-884 
Smart annotation bug fixes [SCI-884, SCI-889] [WIP]
 2017-01-18 16:13:19 +01:00
Matej Zrimšek
dbbb709bf2 Smart annotations minor refactoring. [SCI-884, SCI-889] 2017-01-18 16:04:39 +01:00
Matej Zrimšek
24458fe590 Smart annotations filter switching fixed/hacked. [SCI-884, SCI-889] 2017-01-18 15:29:48 +01:00
Mojca Lorber
dde9854bf1 update protocol import/export and clone 2017-01-18 14:22:19 +01:00
Luka Murn
cf72da5635 Merge branch 'improved-files-handling' into 'master' 
Conflicts:
	app/assets/javascripts/protocols/steps.js.erb
	app/helpers/assets_helper.rb
	db/schema.rb
 2017-01-18 11:29:40 +01:00
Oleksii Kriuchykhin
12eb1df69f Remove previous fix for popups [SCI-855] 2017-01-18 10:59:00 +01:00
Zmago Devetak
1b9f7db385 Merge pull request #405 from ZmagoD/zd_SCI_832 
Visualization of User smart annotation after saving the field
 2017-01-18 09:36:42 +01:00
Matej Zrimšek
d3c33c9dca Refactored smart annotation JS. [SCI-884] 2017-01-17 10:05:41 +01:00
Luka Murn
a2935c6620 Add sample info modal popup to sample smart annotations 
This MR also loads datatables.js globally (as it's required by
the modal), so I removed it everywhere in code, and it shouldn't
be used anymore (e.g. '//= require datatables').

Closes SCI-892.
 2017-01-16 15:52:02 +01:00
Matej Zrimšek
2877126dc6 Fixed selected search filter button style. [SCI-884] 2017-01-16 12:52:03 +01:00
mlorb
88cc87d168 Merge pull request #408 from mlorb/ml-sci-847-v2 
Adjust columns width in samples table header after selecting sample group [SCI-847]
 2017-01-16 10:52:00 +01:00
Mojca Lorber
9f1a49847e fix table header again 2017-01-13 18:54:43 +01:00
Matej Zrimšek
15d7944302 Preventing splitting of the words in the lookup query for # smart annotations. Query on the # is now performed on every character input, before it sometimes just filtered out the old (results count limited) query. Some refactoring of samrt annotations JS. [SCI-884, SCI-889] 2017-01-13 18:51:05 +01:00
Mojca Lorber
5f7e0b2227 adjust columns width in samples table header after selecting sample group 2017-01-13 15:59:47 +01:00
Oleksii Kriuchykhin
a190ef36ff Extend comment to make more clear [SCI-855] 2017-01-13 12:43:43 +01:00
zmagod
1b2fa78e42 adds user preview to user smart annotation [fixes SCI-832] 2017-01-13 11:34:10 +01:00
Oleksii Kriuchykhin
097209bd9d Fix compatibility of fixed samples table header and modal-tooltip [SCI-855] 2017-01-13 11:34:05 +01:00
zmagod
1840fdb7e5 cleanup js 2017-01-12 09:52:29 +01:00
zmagod
3a1ec0eb5e refactor [fixes SCI-834] [fixes SCI-837] [fixes SCI-823] [fixes SCI-835] [fixes SCI-836] [fixes SCI-824] 2017-01-11 14:56:47 +01:00
okriuchykhin
8d4b2d7373 Merge pull request #399 from okriuchykhin/ok_SCI_811_v2 
Fix changed sample type and sample group in sample edit [SCI-811]
 2017-01-11 11:37:38 +01:00
mlorb
b898c792c4 Merge pull request #395 from mlorb/ml_sci_847 
Adjust columns width in table header after selecting sample type/group [SCI-847]
 2017-01-11 10:43:12 +01:00
zmagod
a4aa933151 refactor smart annotation parser helper 2017-01-11 10:34:14 +01:00
zmagod
a903772de8 style dropdown 2017-01-10 17:05:32 +01:00
Oleksii Kriuchykhin
a3d9e25feb Fix changed sample type and sample group in sample edit [SCI-811] 2017-01-10 16:51:51 +01:00
zmagod
fc76a4ae6d Merge branch 'smart-annotations' of https://github.com/biosistemika/scinote-web into zd_SCI_834 2017-01-10 14:22:04 +01:00
zmagod
89e8946a47 expand smart annotation 2017-01-10 14:14:21 +01:00
zmagod
e0e998a0d8 add smart annotation parser helper 2017-01-10 14:14:21 +01:00
zmagod
6efcf49927 working version of dropdown filter 2017-01-10 14:14:21 +01:00
zmagod
53d20df449 added xregexp 2017-01-10 14:14:21 +01:00
zmagod
94262b56ef prepare data for atwho 2017-01-10 14:14:21 +01:00
Luka Murn
0cf5afa499 Merge pull request #376 from Ducz0r/lm-sci-813-fix 
Fix search on hidden columns in samples table [SCI-813]
 2017-01-10 11:27:56 +01:00
Luka Murn
05be1e862f Update filter after toggling visibility (if neccesary) 2017-01-10 11:26:12 +01:00
okriuchykhin
f8237e025a Merge pull request #394 from okriuchykhin/ok_SCI_853 
Fix non removable error messages in samples [SCI-853]
 2017-01-10 11:00:01 +01:00
Oleksii Kriuchykhin
4c9c9037ed Enable image preview after editing protocol and disable preview modal animation [SCI-868] 2017-01-09 17:19:46 +01:00
Mojca Lorber
a0a7f35d44 adjust columns width in table header after selecting sample type/group 2017-01-09 15:00:07 +01:00
Oleksii Kriuchykhin
773b00933a Improve multiple messages handling in samples [SCI-853] 2017-01-09 13:55:50 +01:00
Oleksii Kriuchykhin
0fd7688427 Fix hiding of error messages in the samples datatable [SCI-853] 2017-01-09 13:34:23 +01:00
okriuchykhin
3f930ccfce Merge pull request #392 from okriuchykhin/ok_SCI_858 
Fixes wrong samples info modals being shown in samples datatable [SCI-858]
 2017-01-09 12:49:38 +01:00
mz3944
54ef2be94b Merge pull request #383 from mz3944/mz-sci-845 
Fixed samples table all rows un/checking. [SCI-845]
 2017-01-09 11:58:44 +01:00
mlorb
006db01b11 Merge pull request #390 from mlorb/ml_sci_850 
Fix samples info popup error [SCI-850]
 2017-01-09 11:38:50 +01:00
Oleksii Kriuchykhin
bc8db28746 Fixes wrong samples info modals being shown in samples datatable [SCI-858] 2017-01-09 09:38:42 +01:00
Luka Murn
0ee5b98977 Refactor code a bit, add dismiss button to header 2017-01-07 09:59:52 +01:00
Matej Zrimšek
72df48500d Fixed samples table all rows un/checking. [SCI-845] 2017-01-06 18:19:20 +01:00
Mojca Lorber
6f7c08fa63 fix samples info popup error 2017-01-06 17:31:17 +01:00
Oleksii Kriuchykhin
89710d8782 Enable image preview for newly uploaded images [SCI-694] 2017-01-06 16:41:24 +01:00
Oleksii Kriuchykhin
aa2b573278 Enable image preview while editing steps and code style improvements [SCI-694] 2017-01-06 15:58:23 +01:00
Luka Murn
7835753d3c Add atwho-users URL to <body> 2017-01-06 12:48:37 +01:00
Mojca Lorber
4e7e261225 fix protocol preview 2017-01-06 10:10:33 +01:00
Mojca Lorber
356edba1b3 add protocol preview to search results 2017-01-05 18:08:59 +01:00
Luka Murn
b614ce714b Restyle atwho dropdown 2017-01-05 14:06:48 +01:00
Luka Murn
a78bb79618 Temp commit 2017-01-05 12:07:17 +01:00
Luka Murn
eb64162633 Remove Gem dependency, add atwho as regular vendor/js 2017-01-05 12:06:59 +01:00
Luka Murn
09ef3b3ad5 Merge pull request #378 from Ducz0r/lm-sci-802-fix 
Add tooltips to samples column dropdown [SCI-802]
 2017-01-04 11:30:04 +01:00
Luka Murn
2c5b27ce81 Change "Update" to "Save" 
Closes SCI-802.
 2017-01-04 11:29:34 +01:00
mlorb
59751ec41e Merge pull request #373 from mlorb/ml_sci_709 
Add Protocol Preview to Protocol repository [SCI-709]
 2017-01-04 11:28:55 +01:00
Luka Murn
3bee9d2e12 Save an (yet unworking) version of user smart annotations 
Used so other devs can start working on smart annotations.
 2017-01-04 10:54:02 +01:00
Luka Murn
23e60e0d01 Add Gems for smart annotations (atwho) 2017-01-04 10:51:55 +01:00
Luka Murn
6402acc102 Merge pull request #377 from Ducz0r/lm-sci-820-fix 
Fix 2 bugs with comments editing [SCI-820]
 2017-01-04 10:47:29 +01:00
Luka Murn
37cd6417c8 Merge pull request #374 from Ducz0r/lm-sci-808-814-fix 
Fix some bugs on sample groups & types page [SCI-808, SCI-814]
 2017-01-04 09:50:26 +01:00
Mojca Lorber
a0704cd873 remove duplicated includes of css and js 2017-01-03 17:33:01 +01:00
zmagod
a434649f42 Merge branch 'master' of https://github.com/biosistemika/scinote-web into office_integration 2017-01-03 16:35:25 +01:00
Mojca Lorber
c476faca30 fix hound 2017-01-03 11:04:09 +01:00
Mojca Lorber
e555535dfb add edit button to protocol preview modal 2017-01-03 10:04:14 +01:00
Oleksii Kriuchykhin
0d01a4b2bd Remove unneeded function from utils.js [SCI-819] 2016-12-30 15:50:43 +01:00
Oleksii Kriuchykhin
4065be9e4e Fix marking of selected option [SCI-819] 2016-12-30 15:50:43 +01:00
Oleksii Kriuchykhin
e22ff6f8bb Fix an issue with sample editing and type/group dropdowns [SCI-819] 2016-12-30 15:50:43 +01:00
okriuchykhin
2474eac37d Merge pull request #367 from okriuchykhin/ok_SCI_818 
Fix sample info popup [SCI-818]
 2016-12-30 15:43:28 +01:00
okriuchykhin
e826791429 Merge pull request #365 from okriuchykhin/ok_SCI_807 
Fix buttons disappear when deleting columns in samples [SCI-807]
 2016-12-30 15:43:13 +01:00
okriuchykhin
73478d7b5e Merge pull request #372 from okriuchykhin/ok_SCI_816 
Fix flash message display in samples table [SCI-816]
 2016-12-30 15:30:14 +01:00
Oleksii Kriuchykhin
e156dbc987 Implement flash message hiding through module pattern [SCI-816] 2016-12-28 14:52:03 +01:00
Luka Murn
2304742d87 Add tooltips to samples column dropdown 
Closes SCI-802.
 2016-12-27 08:45:23 +01:00
Luka Murn
b931b20f02 Fix 2 bugs with comments editing 
Closes SCI-820.
 2016-12-23 20:41:23 +01:00
Luka Murn
fbc2be890c Fix search on hidden columns in samples table 
Closes SCI-813.
 2016-12-23 19:56:54 +01:00
Luka Murn
87d8fece46 Fix bug on edit/cancel sample group page 
Closes SCI-814.
 2016-12-23 12:50:49 +01:00
mlorb
876ce37a96 Merge pull request #366 from mlorb/ml-sci-284 
Samples - freeze header row and edit button... [SCI-284]
 2016-12-23 12:29:41 +01:00
Mojca Lorber
40e3240a99 add content to preview modal 2016-12-22 11:43:11 +01:00
Luka Murn
5beaa26224 Update utils.js 
Closes SCI-811.
 2016-12-22 10:03:00 +01:00
Oleksii Kriuchykhin
ee5e0ad455 Fix flash message display in samples table [SCI-816] 2016-12-21 17:26:33 +01:00
Luka Murn
af6bf2aee1 Fix jQuery selector, make it work for new samples 2016-12-21 16:23:09 +01:00
Luka Murn
e52277bdad Fix sample types & groups when editing sample in samples table 
Closes SCI-811.
 2016-12-21 13:15:55 +01:00
Oleksii Kriuchykhin
034976a709 Fix sample info popup [SCI-818] 2016-12-20 17:21:17 +01:00
Oleksii Kriuchykhin
00ea3a027c Fix generation of preview url for new steps and results [SCI-694] 2016-12-20 16:10:53 +01:00
Oleksii Kriuchykhin
cbef971d85 Fix timeouts when fetching images from S3 [SCI-694] 2016-12-20 15:36:07 +01:00
Mojca Lorber
ba0214d1ff staying on same page after saving a sample; fix button disappearance when adding new column 2016-12-20 15:19:31 +01:00
Mojca Lorber
165ec6144c adjust columns width in table header when editing or adding new sample; and fix horizontal scrolling 2016-12-20 13:41:19 +01:00
Oleksii Kriuchykhin
42f71f4da8 Fix buttons disappear when deleting columns in samples datatable [SCI-807] 2016-12-20 09:49:21 +01:00
Oleksii Kriuchykhin
d2b76d8385 Improved image preview modal [SCI-694] 2016-12-19 17:36:18 +01:00
Mojca Lorber
d1e2354f4e add scrolling functionality and remove bug with adding new column 2016-12-19 16:59:09 +01:00
zmagod
6f7f6a8b7f removes dropdown sorting [fixes SCI-811] 2016-12-19 16:41:14 +01:00
zmagod
efe41817f2 removes sample group/type link in new sample form [fixes SCI-809] 2016-12-19 10:49:21 +01:00
Oleksii Kriuchykhin
b537feb8a0 Added large preview [SCI-694] 2016-12-16 17:07:08 +01:00
Oleksii Kriuchykhin
0541253ffa Added modal for images preview [SCI-694] 2016-12-16 15:53:16 +01:00
Zmago Devetak
90a115fff3 Merge pull request #342 from ZmagoD/zd_SCI_758 
Generate png preview images for uploaded TIFF images
 2016-12-16 15:39:07 +01:00
Zmago Devetak
c8631077df Merge pull request #361 from biosistemika/improved-sample-table 
Improved sample table
 2016-12-16 15:37:54 +01:00
Zmago Devetak
c9d38a5454 Merge pull request #359 from ZmagoD/zd_SCI_804 
disables sorting and columns dropdown when editing or adding new samp…
 2016-12-16 12:56:11 +01:00
Zmago Devetak
601594fdb9 Merge pull request #355 from ZmagoD/zd_fix_mozilla_compatibility_issue 
fixes compatibility issue on mozilla firefox
 2016-12-16 11:57:18 +01:00
Zmago Devetak
b35744d18e Merge pull request #360 from ZmagoD/zd_update_gemfile 
updated gemfile
 2016-12-16 11:53:05 +01:00
zmagod
897e34a23b reinitialize highlight.js after ajax call 2016-12-16 11:44:42 +01:00
zmagod
b87246c8c2 cleanup spinner after edit step 2016-12-16 11:10:03 +01:00
Zmago Devetak
ad9b25ba44 Merge pull request #356 from ZmagoD/zd_SCI_803 
fixes bug with long column names in edit mode [fixes SCI-803]
 2016-12-16 11:02:42 +01:00
Zmago Devetak
3d500800cd Merge pull request #358 from ZmagoD/zd_SCI_805_801 
removes error message from new type/group form [fixes SCI-805]
 2016-12-16 10:54:23 +01:00
zmagod
25671c744a disables sorting and columns dropdown when editing or adding new sampe [fixes SCI-804] 2016-12-16 09:50:45 +01:00
zmagod
fffa0d91da removes error message from new type/group form [fixes SCI-805] 2016-12-15 16:17:34 +01:00
zmagod
7c88f3e0aa fixed empty name error 2016-12-15 15:50:07 +01:00
zmagod
6755ebcbf8 fixes bug with long column names in edit mode [fixes SCI-803] 2016-12-15 15:26:51 +01:00
Zmago Devetak
daee14bed5 Merge pull request #343 from ZmagoD/zd_SCI_780 
fixed step description links [fixes SCI-780]
 2016-12-15 13:12:25 +01:00
zmagod
dc6e9dcbd8 fixes compatibility issue on mozilla firefox 2016-12-15 11:57:17 +01:00
Mojca Lorber
69d164da68 add new column on first position 2016-12-15 11:20:40 +01:00
zmagod
9083f84396 Merge branch 'improved-sample-table' of https://github.com/biosistemika/scinote-web into zd_SCI_789 2016-12-15 11:03:19 +01:00
zmagod
3e31f114d4 app/assets/javascripts/samples/sample_datatable.js 2016-12-15 10:51:17 +01:00
zmagod
b164886270 fixed error mesage scroll 2016-12-15 10:44:23 +01:00
zmagod
b003d192c3 fixed edit mode 2016-12-15 09:54:38 +01:00
zmagod
ba58ac2a77 Merge branch 'improved-sample-table' of https://github.com/biosistemika/scinote-web into zd_SCI_781_796 2016-12-15 09:26:12 +01:00
zmagod
54fee339f8 cleanup unneeded code 2016-12-15 09:23:38 +01:00
zmagod
4d6a85ed7c fixed sample groups colorpicker [fixes SCI-781] 2016-12-15 09:23:38 +01:00
zmagod
b07f9fae59 fixes new sample group/type link in sample row [fixes SCI-796] 2016-12-15 09:23:38 +01:00
zmagod
6d2fb3b02c Merge branch 'improved-sample-table' of https://github.com/biosistemika/scinote-web into zd_SCI_790 2016-12-14 17:05:00 +01:00
zmagod
dfd472d37d fixed column name after edit 2016-12-14 16:47:39 +01:00
zmagod
a9f8239516 fixed edit action 2016-12-14 16:37:44 +01:00
okriuchykhin
c4ff12be51 Merge pull request #349 from okriuchykhin/ok_SCI_783 
Fix columns ordering when deleting custom fields [SCI-783]
 2016-12-14 16:19:20 +01:00
Oleksii Kriuchykhin
fa1cf1f04d Better handling of columns deleting with fixing columns ordering [SCI-783] 2016-12-14 15:23:00 +01:00
zmagod
50c9dd3f59 fixed typo 2016-12-14 14:40:56 +01:00
okriuchykhin
2fd7536039 Merge pull request #352 from okriuchykhin/ok_SCI_793 
Hide dropdown when user interacts with samples table [SCI-793]
 2016-12-14 14:19:38 +01:00
okriuchykhin
6381166eb1 Merge pull request #346 from okriuchykhin/ok_SCI_788 
Preserve scroll position in the samples columns dropdown when reordering [SCI-788]
 2016-12-14 14:19:15 +01:00
Zmago Devetak
ef4ae1abcb Merge pull request #348 from ZmagoD/zd_SCI_785 
fixes samples table dropdown edit mode [fixes SCI-785]
 2016-12-14 13:37:09 +01:00
zmagod
1ff98bb6df adds tooltip to samples dropdown and column names 2016-12-14 13:36:10 +01:00
Oleksii Kriuchykhin
9f439cf183 Hide dropdown when user interacts with samples table [SCI-793] 2016-12-13 17:25:01 +01:00
zmagod
d9971b4502 adds error message in samples table dropdown [fixes SCI-789] 2016-12-13 17:08:19 +01:00
Oleksii Kriuchykhin
e414af2fc3 Fix columns ordering when deleting custom fields [SCI-783] 2016-12-13 16:21:17 +01:00
zmagod
fa19bf1de7 fixes samples table dropdown edit mode [fixes SCI-785] 2016-12-13 15:43:31 +01:00
zmagod
2426539715 fixes long names in columns dropdown [fixes SCI-784] 2016-12-13 14:54:37 +01:00
zmagod
c960230bf0 fixes dropdown height bug [fixes SCI-787] 2016-12-13 11:35:50 +01:00
Oleksii Kriuchykhin
de12fac767 Preserve scroll position in the samples coluns dropdown when reordering [SCI_788] 2016-12-13 11:25:35 +01:00
Mojca Lorber
2cfcba0ceb add protocol preview modal 2016-12-13 10:39:18 +01:00
Zmago Devetak
d54007f69c Merge pull request #337 from ZmagoD/zd_SCI_740 
limits max size of all uploaded files at the one time
 2016-12-13 09:04:14 +01:00
zmagod
b56913cc87 refactor 2016-12-12 16:21:38 +01:00
zmagod
8dd8a7e7cd Merge branch 'improved-sample-table' of https://github.com/biosistemika/scinote-web into zd_improved_samples_table_SCI_774_775_778_777 2016-12-12 15:52:25 +01:00
zmagod
5176f8b459 clean unneeded code [fixes SCI-778] refactor js 2016-12-12 15:40:13 +01:00
Luka Murn
d30a9780f4 Merge branch 'lm-sci-711-fix' of https://github.com/Ducz0r/scinote-web into Ducz0r-lm-sci-711-fix 
Conflicts:
	app/assets/javascripts/samples/sample_datatable.js
 2016-12-12 09:57:37 +01:00
okriuchykhin
420daf3a6a Merge pull request #344 from okriuchykhin/ok_SCI_779 
Fix adding new samples columns [SCI-779]
 2016-12-12 09:29:27 +01:00
Oleksii Kriuchykhin
435a8d20bb Fix columns visability and reordering bug [SCI-779] 2016-12-09 17:37:22 +01:00
Matej Zrimšek
54de13de82 Upon redirection when clicking the new sample type or group link, you're automatically in adding mode. [Fixes SCI-701] 2016-12-09 17:22:09 +01:00
Matej Zrimšek
0b12c87b09 Restyled new sample type and group dropdown links. Some minor refactoring of related code and docs. [Fixes SCI-701] 2016-12-09 16:44:50 +01:00
Oleksii Kriuchykhin
460ca067a2 Fix adding new samples columns [SCI-779] 2016-12-09 16:07:41 +01:00
zmagod
e23be6cc0e fixed step description links [fixes SCI-780] 2016-12-09 15:26:41 +01:00
Oleksii Kriuchykhin
274fd63a41 Initial code commit [SCI-779] 2016-12-09 15:21:26 +01:00
zmagod
8b0dab624d clear unneeded css, change processing image [fixes SCI-758] 2016-12-09 14:24:20 +01:00
zmagod
de3099e4d1 removes asset_helper, fixes loading of processed thumbnails in results and steps and when loading protocols from repository 2016-12-09 13:59:49 +01:00
Luka Murn
8a55ef29e4 Remove unused code 
Closes SCI-711.
 2016-12-09 13:49:19 +01:00
Luka Murn
1a8b141b95 Add delete custom field functionality 2016-12-09 13:49:19 +01:00
Luka Murn
7e32c13d27 Fix edit & delete functionality so it works with draggable 2016-12-09 13:18:59 +01:00
Luka Murn
754c90b612 Edit functionality now works 2016-12-09 13:18:59 +01:00
Luka Murn
54ebdbb06c Update edit mode JS & CSS 2016-12-09 13:18:59 +01:00
Luka Murn
da630ac2cb Make edit, delete buttons clickable & hide them if neccesary 2016-12-09 13:18:59 +01:00
Matej Zrimšek
aea679ec11 Added links for creating new sample type and group when creating new sample. [fixes SCI-701] 2016-12-09 11:39:12 +01:00
Mojca Lorber
0e3526c9ad Merge branch 'mlorb-ml-sci-696' into improved-sample-table 
Conflicts:
	app/assets/javascripts/samples/sample_datatable.js
 2016-12-08 15:44:50 +01:00
Mojca Lorber
1b2a438ed4 remove fixed columns 2016-12-08 15:24:54 +01:00
zmagod
40fdfef67f setup delayed_paperclip gem 2016-12-08 15:24:14 +01:00
Mojca Lorber
7d88e247fc refactoring 2016-12-08 14:41:35 +01:00
zmagod
ac52e643be cleanup direct upload 2016-12-08 11:26:13 +01:00
Mojca Lorber
5b5342de6f make first column fixed 2016-12-07 15:02:18 +01:00
zmagod
9f1e436623 limits max size of all uploaded files at the one time [fixes SCI-740] 2016-12-07 09:02:04 +01:00
okriuchykhin
cb2abfa7a9 Merge pull request #325 from okriuchykhin/ok_SCI_712 
Added form for adding new columns to samples table into dropdown [SCI-712]
 2016-12-06 15:00:01 +01:00
Zmago Devetak
49f9e64171 Merge pull request #333 from ZmagoD/zd_SCI_700 
Managing sample groups tab
 2016-12-06 14:51:09 +01:00
zmagod
8ca7151df4 added constant to load_from_file_size_error local 2016-12-06 13:52:07 +01:00
Oleksii Kriuchykhin
e02d780e44 Added Enter key handling and fixed error reporting [SCI-712] 2016-12-06 13:22:26 +01:00
Oleksii Kriuchykhin
da7e86c7c2 Fix save/delete buttons after updating datatable and added permissions check [SCI-712] 2016-12-06 13:22:26 +01:00
Oleksii Kriuchykhin
f6dd64772a Add columns to samples table without page reload [SCI-712] 2016-12-06 13:22:26 +01:00
Oleksii Kriuchykhin
40db8310fd Move code to sample_datatable.js and removed unused modal [SCI-712] 2016-12-06 13:22:26 +01:00
Oleksii Kriuchykhin
22dabd2177 Added form for adding new columns to samples table into dropdown [SCI-712] 2016-12-06 13:17:05 +01:00
Oleksii Kriuchykhin
94866e8994 Initial code commit for samples columns dropdown [SCI-712] 2016-12-06 13:16:05 +01:00
Mojca Lorber
1bc0ca9e75 fix bug with first time load 2016-12-06 13:14:29 +01:00
zmagod
787b8b1600 fixed new sample type/group form 2016-12-06 12:01:02 +01:00
Mojca Lorber
12088ebfd3 add visibility functionality after refresh 2016-12-06 09:40:28 +01:00
Mojca Lorber
849f78b4df implement reordering of columns in the samples table and change from local to database storage 2016-12-05 11:34:36 +01:00
zmagod
ef2471d3f7 fixes inport eln error message and spinner [fixes SCI-752] 2016-12-05 10:44:58 +01:00
zmagod
7725374c42 refactor sample types/groups [fixes SCI-700] 2016-12-02 09:58:35 +01:00
zmagod
83aae59eed adds sample groups index page 2016-12-02 09:33:09 +01:00
Zmago Devetak
33adb58950 Merge pull request #328 from ZmagoD/zd_SCI_699 
Managing sample types tab
 2016-11-30 16:14:13 +01:00
Oleksii Kriuchykhin
f51f33ec25 Added sorting functionality to samples colunmns dropdown [SCI-695] 2016-11-30 11:42:05 +01:00
zmagod
a2e13441e5 removes create_sample_type modal and related js actions 2016-11-30 09:02:34 +01:00
zmagod
4e4a48620c adds validation to input fields 2016-11-29 18:08:29 +01:00
zmagod
12848f15fa adds sample_type index view with all crud actions 2016-11-29 17:15:54 +01:00
Zmago Devetak
1e870a6e7c Merge pull request #320 from ZmagoD/zd_SCI_698 
adds new samples columns dropdown [fixes SCI-698]
 2016-11-28 16:30:16 +01:00
zmagod
72d1dfb15e cleanup sample_datatable.js 2016-11-28 16:28:22 +01:00
zmagod
9d91d2ce28 adds new samples columns dropdown [fixes SCI-698] 2016-11-25 17:29:30 +01:00
Luka Murn
b1b095910c Merge pull request #309 from Ducz0r/lm-remove-unused-files 
Brace for impact...
 2016-11-25 10:00:29 +01:00
Matej Zrimšek
1db926101d Minor refactoring. 2016-11-23 10:48:43 +01:00
Matej Zrimšek
6bc2603157 Fixed tutorial overlay unexpectedly blurring the screen when not running the tutorial. [fixes SCI-707] 2016-11-23 10:36:09 +01:00
Zmago Devetak
0f3db56a74 Merge pull request #311 from ZmagoD/zd_SCI_716 
load comments after edit step [fixes SCI-716]
 2016-11-23 09:14:57 +01:00
zmagod
8d7285ce7c load comments after edit step [fixes SCI-716] 2016-11-22 14:39:08 +01:00
Oleksii Kriuchykhin
d7aa155860 Disable keyboard navigation in tutorial [SCI-703] 2016-11-22 14:14:42 +01:00
Oleksii Kriuchykhin
be59b85d3b Added additional checks for tutorial steps [SCI-703] 2016-11-22 13:55:23 +01:00
Oleksii Kriuchykhin
cc86ff268f Reload page after exit from tutorial [SCI-703] 2016-11-22 13:49:57 +01:00
mz3944
c5bc3a4dc6 Merge pull request #303 from mz3944/mz_and_new_tutorial_steps_SCI_571_v2 
Added additional tutorial step for showing protocol link. Tutorial st…
 2016-11-21 16:06:45 +01:00
Oleksii Kriuchykhin
d6f5f6b9bf Changes default behaviour for absolute urls in Quill [SCI-684] 2016-11-21 14:18:08 +01:00
Luka Murn
f5795f5516 Remove unused assets & helpers 2016-11-18 11:30:03 +01:00
Matej Zrimšek
f13cc5be0e Added additional tutorial step for showing protocol link. Tutorial steps 1-3 are now completelly handled in JS and not in HTML (preferred way). 2016-11-17 18:03:49 +01:00
Luka Murn
26d04b1f3c Merge branch 'rich-text-formatting' into 'master' 
Conflicts:
	Gemfile.lock
	app/assets/stylesheets/themes/scinote.scss
 2016-11-17 16:39:33 +01:00
Luka Murn
9d3685f872 Merge branch 'gamification' into 'master' 
Conflicts:
	app/controllers/users/invitations_controller.rb
	app/controllers/users/settings_controller.rb
 2016-11-17 16:30:18 +01:00
Matej Zrimšek
c8eb82cc85 Fixed tutorial step numbers and changed getting next page reference on protocols page. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
92d990a715 Code for tutorial function steps parameter reformatted. Deleted Git merging line. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
0e97bfc002 Refactored and added back button for tutorial for steps 21-22. Minor tutorial function renaming and docs update. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
c64146904a Refactored and added back button for tutorial for steps 19-20. Updated tutorial steps count. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
47c1308ba6 Refactored and added back button for tutorial for step 18. Tutorial function now also works with one page step. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
00ed91e856 Refactored and added back button for tutorial for steps 16-17. Tutorial now exits upon page leave. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
bfe7c19f93 Refactored and added back button for tutorial for steps 14-15. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
4ee7baabec Enriched tutorial function description. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
33c96c9eee Refactored and added back button for tutorial for steps 12-13. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
0687153eb8 Minor tutorial refactoring. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
f4206ea3d0 No warning popup is shown when running tutorial. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
3f8d3d5939 Refactored and added back button for tutorial for steps 6-11. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
74e58b044f Tutorial refactored using one method, for steps 1-5. 2016-11-17 14:46:04 +01:00
Matej Zrimšek
0d133ff32e Refactoring and added back buttons for tutorial steps 1-5. 2016-11-17 14:46:04 +01:00
Luka Murn
d1701bd7ae Merge pull request #276 from Ducz0r/lm-sci-637 
Automatically resize textarea elements [SCI-637]
 2016-11-17 09:58:36 +01:00
Luka Murn
a3bbf94643 Add a smart_text_area tag & implement it throughout application 
This fixes the mentioned issues @mlorb mentioned.
Closes SCI-637.
 2016-11-16 17:57:01 +01:00
Oleksii Kriuchykhin
d2e29935cf Improved tutorial styling [SCI-685] 2016-11-16 15:44:06 +01:00
okriuchykhin
43b85ac5c2 Merge pull request #293 from okriuchykhin/ok_SCI_670 
Fix project canvas interactivity in the tutorial [SCI-670]
 2016-11-16 11:32:13 +01:00
Luka Murn
83160a487b Fix importer so it supports rendering & importing rich text format 
Closes SCI-674.
 2016-11-15 16:57:53 +01:00
Oleksii Kriuchykhin
410837e6cf Fix project canvas interactivity in the tutorial [SCI-670] 2016-11-15 16:53:20 +01:00
Luka Murn
263244ad83 Reload whole page after user is invited from team invite users modal 
Closes SCI-664.
 2016-11-15 16:21:32 +01:00
mlorb
b0b2484fdf Merge pull request #279 from mlorb/ml_sci_638_vol2 
Fix validation problems for rich text fields [SCI-638]
 2016-11-11 12:37:02 +01:00
Mojca Lorber
4d681bb63c change strip html function 2016-11-11 12:34:57 +01:00
zmagod
59f7bdb54e hide flash after 5 sec [fixes SCI-660] 2016-11-11 12:30:48 +01:00
Mojca Lorber
3b7af3e66c fix validation logic 2016-11-11 11:42:16 +01:00
Oleksii Kriuchykhin
b9f982ead7 Additional steps added to tutorial and numbering of the steps fixed [SCI-571] 2016-11-11 10:07:34 +01:00
Oleksii Kriuchykhin
d2491a18a4 Tutorial Save Protocol step added [SCI-571] 2016-11-11 10:06:18 +01:00
Luka Murn
b42922d32c Add autosize functionality to all textareas 
Closes SCI-637
 2016-11-11 09:09:41 +01:00
Luka Murn
55f9633d1d Add jQuery.autosize plugin 2016-11-11 09:09:41 +01:00
Luka Murn
acd8ce8932 Merge pull request #270 from Ducz0r/lm-sci-644 
Convert all large text input fields into text areas (10000 characters)
 2016-11-11 09:07:25 +01:00
Luka Murn
0e065026bd Closes SCI-648 2016-11-10 16:18:17 +01:00
Mojca Lorber
ab0879e8d6 Integrate library with default settings 2016-11-09 13:09:53 +01:00
Luka Murn
b246853117 Code styling (use link_to, %w) 2016-11-08 16:43:25 +01:00
Luka Murn
55d8fea359 Make all comment edit fields textareas 2016-11-08 11:29:55 +01:00
Luka Murn
0ab62576a2 Add new modal to organization page, remove old modal code 2016-11-07 09:43:10 +01:00
Luka Murn
6fe0d6b3df A working invite modal! 2016-11-07 09:43:10 +01:00
Luka Murn
ccf8932611 Add first version of invite users modal 2016-11-07 09:43:09 +01:00
Luka Murn
b4685b0a40 Remove console.log() 2016-10-25 18:13:29 +02:00
Luka Murn
cd360d7279 Fix the save report alert() bug 
Closes SCI-616
 2016-10-25 18:12:29 +02:00
Zmago Devetak
12c77df883 Merge pull request #237 from ZmagoD/zd_SCI_593_v2 
Styled global team switch and search [fixes SCI-593]
 2016-10-21 16:28:50 +02:00
zmagod
49d3879642 fixes padding on mobile, added separator on team switch dropdown, focus search input 2016-10-21 11:46:59 +02:00
okriuchykhin
f876ade05e Merge pull request #236 from okriuchykhin/ok_SCI_557 
Fixes issue with new comments and date separator SCI-557
 2016-10-21 10:29:46 +02:00
Zmago Devetak
f615b3da41 Merge pull request #230 from ZmagoD/zd_SCI_586 
Adds new team button to team switch dropdown [fixes SCI-586]
 2016-10-21 08:29:05 +02:00
Oleksii Kriuchykhin
0c1ff06f21 Fixes issue with new comments and date separator SCI-557 2016-10-20 22:33:15 +02:00
mlorb
fa4f3fb0a0 Merge pull request #220 from mlorb/ml_sci_462 
fix multiplication of edit comment fields [SCI-462]
 2016-10-20 15:14:31 +02:00
Oleksii Kriuchykhin
347216183f Fixes different color of buttons in notifications settings [SCI-590] 2016-10-20 14:17:07 +02:00
zmagod
f21c9e394f adds new team button to team switch dropdown [fixes SCI-586] 2016-10-20 13:47:41 +02:00
Luka Murn
640a575a3a Merge pull request #222 from biosistemika/modular-tasks 
Merge global team switch into master
 2016-10-18 11:39:09 +02:00
zmagod
557957c857 fixed issue with mozilla browsers 2016-10-17 15:21:19 +02:00
zmagod
d86a4dd311 setup global team switch view and controller action 2016-10-17 15:10:26 +02:00
Oleksii Kriuchykhin
0ec7c019b3 Fix issue with pop-up windows and turbolinks [SCI-463] 2016-10-17 14:25:54 +02:00
Mojca Lorber
177c4b5918 fix multiplication of edit comment fields 2016-10-17 12:59:51 +02:00
Matej Zrimšek
f2cd9890dd Replaced hardcoded infinity values with constants. Added quotation marks to Ruby string constants in JS. 2016-10-17 11:57:47 +02:00
Matej Zrimšek
a6a2a237aa Removed unneeded ERB tags, which caused error. Minor refactoring. 2016-10-17 11:57:47 +02:00
Matej Zrimšek
ece89da391 Removed ruby constants duplicates in JS, because of caching problems. 2016-10-17 11:57:47 +02:00
Matej Zrimšek
05acf5a725 Replaced all Ruby constants instances in JS to be called from JS. 2016-10-17 11:57:46 +02:00
Matej Zrimšek
0780bd2416 Ruby constants are now automatically available in JS. Refactoring was needed. 2016-10-17 11:57:37 +02:00
Matej Zrimšek
a3dfb59558 Added remaining constants. 2016-10-17 11:30:05 +02:00
Matej Zrimšek
21ec05d541 Refactored searches (user and globals earch) and used constants. 2016-10-17 11:17:59 +02:00
Oleksii Kriuchykhin
c6fb57318f Added use of constants in JS [SCI-530] 2016-10-13 13:06:11 +02:00
Oleksii Kriuchykhin
37cff75013 Fixes issue with comments options menu [SCI-530] 2016-10-13 12:07:41 +02:00
Mojca Lorber
42f6b679f8 Adding system notifications email function in settings 2016-10-12 11:50:26 +02:00
Mojca Lorber
6bea0a9e1a fixes merge conflicts 2016-10-12 10:55:40 +02:00
Mojca Lorber
4f1cbad7da adding update notifications in settings 2016-10-12 10:42:07 +02:00
Zmago Devetak
f25767fdc3 Merge pull request #209 from ZmagoD/zd_SCI_534_remove_popup 
Removed introductory popup [fixes SCI-534]
 2016-10-12 08:13:46 +02:00
Oleksii Kriuchykhin
5399033fce Added user settings for email notifications [SCI-443] 2016-10-11 16:43:17 +02:00
zmagod
42a30576e3 removed introductory popup [fixes SCI-534] 2016-10-11 08:33:50 +02:00
Jure Grabnar
1f67aec258 Prevent destroying protocols when file is edited 
SCI-552 #close
 2016-10-06 16:13:42 +02:00
Luka Murn
5c80c8a817 Add "no notifications" to dropdown & notifications index page 2016-10-05 16:58:21 +02:00
okriuchykhin
50f28fe883 Merge pull request #193 from okriuchykhin/ok_global_notifications-SCI-442 
Global notifications screen [SCI-442]
 2016-10-05 16:01:41 +02:00
Oleksii Kriuchykhin
868ffd03d6 JS code improvement [SCI-442] 2016-10-05 15:51:11 +02:00
Oleksii Kriuchykhin
8907e54b49 Global notifications index page added [SCI-442] 2016-10-05 15:51:11 +02:00
Zmago Devetak
f3708bcac0 Merge pull request #191 from ZmagoD/zd_SCI_469_ver2 
Comments date duplication
 2016-10-05 15:47:42 +02:00
zmagod
b0f6b1f4d0 fixed comments action on project page 2016-10-05 15:39:54 +02:00
Zmago Devetak
eea310514a Merge pull request #194 from ZmagoD/zd_SCI_531_533 
Notification style fixes
 2016-10-05 15:27:36 +02:00
zmagod
bca3d19562 fixed comment options dropdown position 2016-10-05 15:26:11 +02:00
Zmago Devetak
71ad5bf034 Merge pull request #190 from ZmagoD/zd_SCI_529 
Prepare settings screen for notifications
 2016-10-05 14:54:47 +02:00
okriuchykhin
bfa7e57bd8 Merge pull request #168 from okriuchykhin/ok_SCI-463 
Fixes issue with unexpected notification windows [fixes SCI-463]
 2016-10-05 14:45:23 +02:00
zmagod
f9d956bbca fix notifications number on [fixes SCI-531] 2016-10-05 11:50:57 +02:00
zmagod
d90f17d1eb clean comments date duplication [fixes SCI-469] 2016-10-05 08:42:32 +02:00
zmagod
a68e7abc57 first run notification settings 2016-10-04 15:52:48 +02:00
Luka Murn
61cb9651c7 Merge pull request #188 from biosistemika/global-notifications 
Global notifications
 2016-10-04 08:30:50 +02:00
zmagod
c9bbab1004 added html_safe to outputed message, hide notifications number when dropdown is toggled, clear all unseen notification form count when the dropdown is toggled, generate notification only to other users 2016-10-03 20:31:00 +02:00
mlorb
153b692c0c Merge pull request #181 from mlorb/ml_sci_321 
Displaying more information for individual samples in Sample table [SCI-321]
 2016-10-03 16:37:35 +02:00
zmagod
36fb2713b3 start fixing comments dates 2016-10-03 16:10:20 +02:00
Zmago Devetak
91c7d8a952 Merge pull request #176 from ZmagoD/zd_SCI_474 
Unify the comments
 2016-10-03 15:26:17 +02:00
Jure Grabnar
f727289935 Add lock check for editing result 2016-10-03 13:43:35 +02:00
zmagod
77df0bc82c cleans more comment link 2016-10-03 12:34:16 +02:00
Mojca Lorber
093fbd6b8e fixes hound again 2016-10-03 10:40:32 +02:00
Mojca Lorber
2041f2a09d fixes hound 2016-10-03 10:15:46 +02:00
Mojca Lorber
053cd8ed84 removes handler 2016-10-03 10:12:13 +02:00
zmagod
b9bc2f17c8 fixing hound 2016-10-03 08:27:13 +02:00
zmagod
2ee02ec472 mark all seen notifications 2016-10-03 08:20:23 +02:00
Luka Murn
c83342d9f0 Merge pull request #173 from okriuchykhin/ok_SCI-484 
Fix issue with duplicate error messages in experiments modal [SCI-484]
 2016-09-30 08:24:51 +02:00
zmagod
e1a1b93d44 fixed migrations 2016-09-29 14:49:58 +02:00
Mojca Lorber
f4345f3aef fixes hound 2016-09-28 16:09:39 +02:00
Mojca Lorber
efa7a1d7b5 add sample information in pop-up 2016-09-28 15:46:41 +02:00
zmagod
2a86aaf7e4 changed popout content [fixes SCI-520] 2016-09-28 15:12:30 +02:00
zmagod
dad0d3868b fixing hound 2016-09-27 17:31:37 +02:00
zmagod
402a77526a cleaned console.log 2016-09-27 16:22:09 +02:00
zmagod
2235778110 fixed project and task comments + fixed date issue 2016-09-27 16:19:31 +02:00
zmagod
0d322eba13 fixed hound 2016-09-27 11:03:10 +02:00
zmagod
4903cb970c removed comments helper 2016-09-27 10:47:18 +02:00
zmagod
1eb9f772f4 refactor sciNote comments js and unified all comments behavior [fixes SCI-474] 2016-09-27 10:30:48 +02:00
zmagod
1cdfde827f fixes protocol and results comments 2016-09-27 09:26:25 +02:00
zmagod
980ff63104 fixed task comments 2016-09-27 09:18:46 +02:00
zmagod
02bfa1949e fixed project comments 2016-09-27 09:00:02 +02:00
Oleksii Kriuchykhin
8a3a9451e9 Fix issue with duplicate error messages in experiments modal [SCI-484] 2016-09-26 12:58:22 +02:00
Oleksii Kriuchykhin
db1e24202a Minor code cleanup [fixes SCI-463] 2016-09-26 09:08:38 +02:00
Mojca Lorber
c2b742374f adding popup sample info 2016-09-23 17:45:02 +02:00
Oleksii Kriuchykhin
2c144aa2f3 Fix issue with unexpected notification windows appearing after report editor exit [fixes SCI-463] 2016-09-23 11:56:13 +02:00
Zmago Devetak
2b678998d3 Merge pull request #166 from ZmagoD/zd_SCI_471 
fixes load comments [fixes SCI-471]
 2016-09-23 09:17:27 +02:00
zmagod
4f2df691ba add error validations 2016-09-23 08:34:39 +02:00
zmagod
6143b257d0 fixes edit modal [fixes SCI-467] 2016-09-23 08:32:46 +02:00
Matej Zrimšek
0317872bc0 Added check if no comments are present for file result, which caused JS error. 2016-09-22 18:12:35 +02:00
mz3944
cde7f3805f Merge pull request #165 from mz3944/mz_replace_hardcoded_values_with_constants_v2 
Added missing validation for protocol description.
 2016-09-22 17:36:18 +02:00
Matej Zrimšek
13e886f7a9 Removed unneeded upper case for errors which had them, along with their refactoring. [fixes SCI-408] 2016-09-22 17:35:23 +02:00
okriuchykhin
087ee08976 Merge pull request #164 from okriuchykhin/ok_SCI-400 
Fixes issue with new experiment modal and with move of experiments [fixes SCI-400]
 2016-09-22 17:01:58 +02:00
okriuchykhin
729cbef27b Merge pull request #156 from okriuchykhin/ok_SCI-459 
Fixes issue with too many " | " signs in error message [fixes SCI-459]
 2016-09-22 16:12:17 +02:00
zmagod
303cb4308a fixes load comments [fixes SCI-471] 2016-09-22 13:46:27 +02:00
Oleksii Kriuchykhin
b334b037f8 Fixes issue with old data in modal fields [fixes SCI-400] 2016-09-22 10:54:03 +02:00
Matej Zrimšek
c614843044 Minor refactoring with hound alert fixes. 2016-09-21 19:48:18 +02:00
Matej Zrimšek
234918a76d Word wrapping and truncating added to whole application [fixes SCI-458]. Fixed some bugs which were related to long/too long text and validations. Modified parts of application to accomodate for longer text limits. 2016-09-21 19:48:18 +02:00
Matej Zrimšek
c6a23aab98 Added missing validations for text fields. Added text trimming, which removes spaces from beginning and ending of text. [fixes SCI-408] 2016-09-21 19:37:36 +02:00
zmagod
06b1992e94 Merge branch 'zd_SCI_436' of https://github.com/ZmagoD/scinote-web into ZmagoD-zd_SCI_436 2016-09-21 19:20:55 +02:00
zmagod
2bfe8f0636 fixing hound 2016-09-21 08:16:23 +02:00
zmagod
9f56df02d2 removes comment tab and add comment in the info tab [fixes SCI-436] 2016-09-20 18:53:51 +02:00
zmagod
42bbc47f5f first working version 2016-09-20 17:06:07 +02:00
zmagod
0ca65aeca5 fixed step comment sorting 2016-09-20 13:31:50 +02:00
zmagod
cd64e035c0 set form validations 2016-09-20 09:50:03 +02:00
zmagod
f48553e807 fixed ajax call 2016-09-19 16:12:07 +02:00
Oleksii Kriuchykhin
3f0a2c7dfc Fixes issue with too many " | " signs in error message [fixes SCI-459] 2016-09-19 13:53:24 +02:00
Matej Zrimšek
c2f0106993 Replaced hardcoded values with unified constants. Minor refactoring. Also front-end error handling was updated accordingly. [fixes SCI-408] 2016-09-16 15:56:44 +02:00
zmagod
938aa32190 js tweaks 2016-09-16 15:22:24 +02:00
zmagod
635f6b92d6 fixed comments display 2016-09-16 11:55:10 +02:00
zmagod
b9b466cd8e Merge branch 'jg_sci_350_formulas' of https://github.com/jbargu/scinote-web into jbargu-jg_sci_350_formulas 2016-09-16 09:28:19 +02:00
zmagod
e90f0bd3d5 refactor step view 2016-09-16 09:04:21 +02:00
Zmago Devetak
01656c1018 Merge pull request #153 from ZmagoD/zd_SCI_448 
Wrong name of experiment and task - gets undefined as prefix
 2016-09-15 15:00:34 +02:00
mlorb
587369e7a6 Merge pull request #152 from mlorb/ml_sci_428 
fixes responsiveness on mobile phone for sample view [SCI-428]
 2016-09-15 12:11:48 +02:00
zmagod
0a2ab57e28 styled new comments layout 2016-09-15 11:45:51 +02:00
zmagod
e3ae22763e removed comments tab in protocol step 2016-09-15 08:46:14 +02:00
Zmago Devetak
d0a180a1e8 Merge pull request #148 from ZmagoD/zd_SCI_342 
fixes sidebar expanded elements when adding new experiments
 2016-09-14 13:48:34 +02:00
Mojca Lorber
386cedda71 fixes hound again 2016-09-14 11:34:24 +02:00
Mojca Lorber
aba5305cd6 fixes hound 2016-09-14 11:24:19 +02:00
zmagod
c4fabdb67a clean unneeded Observer configurations 2016-09-14 11:16:42 +02:00
zmagod
e1d871dcdb clear undefind from experiment name and refactor sidebar in reports [fixes SCI-448] 2016-09-14 11:11:35 +02:00
Mojca Lorber
a9029e0928 fixes responsiveness on mobile phone for sample view 2016-09-14 11:08:40 +02:00
zmagod
65383f1824 fixes sidebar expanded elements when adding new experiments [fixes SCI-342] 2016-09-13 13:09:57 +02:00
Jure Grabnar
fa3515d2eb Add formulas to reports 2016-09-13 09:46:21 +02:00
Jure Grabnar
3b364be70b Add formulas to steps tables 2016-09-13 09:44:17 +02:00
Jure Grabnar
5c88bdeeae Add formulas for readonly results tables 2016-09-13 09:44:17 +02:00
Jure Grabnar
e096f936f9 Add formulas to results 2016-09-13 09:44:17 +02:00
Matej Zrimšek
af8ab3e081 Fixed step's checklist items editing (items not multiplying and new item insertion always at bottom) [fixes SCI-427]. Improved step/result comment GUI [SCI-446]. 2016-09-12 16:55:46 +02:00
Zmago Devetak
1368716aa0 Merge pull request #130 from ZmagoD/zd_SCI_348 
project overview - updating (or creating new) experiment details
 2016-09-08 12:49:35 +02:00
mlorb
f4029a04fd Merge pull request #142 from mlorb/ml_sci_415 
fixes navbar size when resizing window [SCI-415]
 2016-09-08 12:46:36 +02:00
Matej Zrimšek
6eca3661bf Some JS error refactoring and accordingly updated error rendering when experiment description is too long. 2016-09-08 12:43:31 +02:00
Mojca Lorber
4c66ca6f80 fixes navbar size when resizing window 2016-09-08 09:17:58 +02:00
Matej Zrimšek
b0ad6d0753 Fixed result file deletion and result name updating [fixes SCI-409]. Fixed step name and checklists names and its items names checking, and items removing [fixes SCI-407]. 2016-09-06 23:26:00 +02:00
zmagod
daa144ce7c added missing bracket 2016-09-06 11:57:03 +02:00
zmagod
856d226946 fixed move experiment form error duplication 2016-09-06 11:48:56 +02:00
zmagod
a5a24c7610 clear unused variable 2016-09-06 11:46:28 +02:00
zmagod
b672d85405 fixed error message duplication 2016-09-06 11:46:28 +02:00
zmagod
b44a284b54 sets edit experiment validation 2016-09-06 11:46:28 +02:00
zmagod
9d469f9092 sets front end validation for new experiment modal [fixes SCI-348] 2016-09-06 11:44:03 +02:00
zmagod
de6c03a73b setup experiment modal input validation 2016-09-06 11:44:03 +02:00
Zmago Devetak
9440371f3f Merge pull request #131 from ZmagoD/zd_SCI_400 
Sets front end validation for experiment move action [fixes SCI-400]
 2016-09-06 11:39:38 +02:00
Zmago Devetak
1a19753df9 Merge pull request #128 from ZmagoD/zd_SCI_105 
Trim long words in reports [fixes SCI-105]
 2016-09-06 10:10:06 +02:00
zmagod
a7b6135b2f cleared console.log 2016-09-06 10:08:32 +02:00
Luka Murn
81883911c4 Merge pull request #132 from Ducz0r/lm-sci-228 
Updates to invite users to team modal window
 2016-09-05 15:53:15 +02:00
Luka Murn
1d8600b39f Fix bug when inviting existing users onto teams 
Closes SCI-228
 2016-09-05 14:52:56 +02:00
mz3944
50e0c26e89 Merge pull request #125 from mz3944/mz_removed_avatar_upload_popop_sci_399 
Popup for preventing page leaving when uploading avatar fixed [fixes SCI-399]
 2016-09-05 11:49:04 +02:00
zmagod
667fb67052 sets front end validation for experiment move action [fixes SCI-400] 2016-09-02 16:31:17 +02:00
Zmago Devetak
ea26a532e4 Merge pull request #126 from ZmagoD/zd_SCI_332 
By default all experiments should be collapsed
 2016-09-02 15:58:03 +02:00
zmagod
28fa00c30c trim long words in reports [fixes SCI-105] 2016-09-01 15:45:39 +02:00
zmagod
ac7ac95da8 [fixes SCI-332] 2016-09-01 10:38:20 +02:00
Matej Zrimšek
4fdf478426 Minor refactoring. 2016-08-31 17:57:06 +02:00
Matej Zrimšek
828eebeb16 Popup for preventing page leaving when uploading avatar fixed [fixes SCI-399] 2016-08-31 17:21:17 +02:00
zmagod
55ba2de41f fixes object duplication 2016-08-31 16:34:08 +02:00
zmagod
fabfa83171 introdutory popup cookie 2016-08-31 15:18:21 +02:00
zmagod
e8f971829a added project to session storage 2016-08-31 15:13:17 +02:00
Luka Murn
5cb79f6282 Fix the default parameters in JS 
This was causing major issues in IE.
 2016-08-31 14:04:45 +02:00
zmagod
b05c3df4d3 adds toggle id only to elements with modules 2016-08-31 10:25:40 +02:00
zmagod
21f84bacb6 set sidebar collapsed elements 2016-08-31 08:24:59 +02:00
jbargu
2cd5d85d68 Merge pull request #120 from jbargu/jg_SCI_328_move_experiment_reconnect 
When moving a task, it should connect the source and destination
 2016-08-30 18:01:38 +02:00
mlorb
905acfd43d Merge pull request #109 from mlorb/ml_sci_286 
fixes notification when adding new sample [SCI-286]
 2016-08-30 17:54:45 +02:00
Mojca Lorber
dd8e5d5e12 fixes hound 2016-08-30 17:12:26 +02:00
Mojca Lorber
1b1e6daa21 fixes notification disappearance and error notifications 2016-08-30 16:55:59 +02:00
Jure Grabnar
9a82e7d72b Connect tasks on moving 
SCI-328 #close
 2016-08-30 15:57:27 +02:00
mlorb
8fc29248b3 Merge pull request #119 from mlorb/ml_sci_396 
fixes missing experiment name in side bar [SCI-396]
 2016-08-30 15:05:04 +02:00
Zmago Devetak
11b314fa20 Merge pull request #107 from ZmagoD/zd_bug_fix 
fixes new task button after tutorial ends
 2016-08-30 15:04:11 +02:00
Mojca Lorber
52f228725a fixes hound 2016-08-30 14:04:47 +02:00
Mojca Lorber
aeda6f77d2 fixes missing experiment name in side bar 2016-08-30 13:51:16 +02:00
Luka Murn
c6e575bd2a Merge pull request #115 from Ducz0r/lm-deleting-comments-fix 
Fix for deleting comments
 2016-08-30 13:15:35 +02:00
Luka Murn
77ec5bcff9 Reposition comment dropdowns horizontally if needed 
Closes SCI-258
 2016-08-30 11:39:50 +02:00
Luka Murn
4ee4c6caba Remove JS validator from step comments 2016-08-30 11:06:30 +02:00
zmagod
4b6567e488 fixed workflowimg link 2016-08-30 11:03:33 +02:00
zmagod
6f1c4df942 fixed new task button in canvas 2016-08-30 10:48:28 +02:00
zmagod
57c1707e81 fixes secondary navigation [fixes SCI-338] 2016-08-30 09:53:56 +02:00
zmagod
d33bb50519 disabled secondary navigation in samples tutorial 2016-08-30 08:57:05 +02:00
zmagod
5518d1cd1e fixed 16 step of tutorial 2016-08-30 08:52:44 +02:00
Mojca Lorber
53cdbc2638 fixes notification when adding new sample 2016-08-29 13:45:54 +02:00
zmagod
5af9d10c6a fixes new task button after tutorial ends 2016-08-29 11:46:45 +02:00
zmagod
d886d05ccb Merge branch 'zd_SCI_338' 2016-08-26 16:32:49 +02:00
Matej Zrimšek
e3a7f45fdf Merge branch 'master' into mz_file_upload_and_client_side_upgrade 
Conflicts:
	app/assets/javascripts/application.js
	app/views/results/_result_asset.html.erb
	app/views/steps/_step.html.erb
 2016-08-26 11:13:40 +02:00
Zmago Devetak
0cfc758f43 Merge pull request #102 from ZmagoD/zd_SCI_336 
implement first time popup logic
 2016-08-26 09:19:36 +02:00
zmagod
b0bd92e3f4 fixed edit action 2016-08-26 09:17:55 +02:00
Matej Zrimšek
782d384e26 Spinner now doesn't hide prematurally on file uploading. Some recently introduced bugs quickfixes (report images not showing, locale missplealing, client-side blank tables deletion deleted all tables, error if no asset present in a step). 2016-08-25 22:26:53 +02:00
Matej Zrimšek
04d9163ff6 Paperclip file spoofing corrected/modified. 2016-08-25 18:57:06 +02:00
zmagod
99976722a8 uncomment js file 2016-08-25 18:49:49 +02:00
zmagod
1738ca66d2 one-time introductory popup [fixes SCI-336] 2016-08-25 18:44:21 +02:00
Luka Murn
8018cff02e Merge pull request #103 from Ducz0r/bb_edit_delete_comments 
Edit&delete comments
 2016-08-25 17:18:48 +02:00
mlorb
b1218cb3d6 Merge pull request #59 from biosistemika/ml_sci_244 
fixes tutorial bug of inappropriate window [SCI-244]
 2016-08-25 17:16:45 +02:00
Luka Murn
b533b0aca6 Fix another minor bug 2016-08-25 17:15:53 +02:00
Luka Murn
7cd94e8b0d Fix a minor bug on canvas 2016-08-25 17:09:55 +02:00
Luka Murn
9cd99fc532 Display "no comments" if you delete the last comment 2016-08-25 17:01:30 +02:00
zmagod
7a47ff6bc5 fixed new task error 2016-08-25 15:30:32 +02:00
zmagod
8ff645fb89 disabled experiment dropdown actions 2016-08-25 15:16:51 +02:00
Zmago Devetak
b090fd8d5b Merge pull request #95 from ZmagoD/zd_SCI_374 
adds edit workflow link if no workflow [fixes SCI-374]
 2016-08-25 14:07:33 +02:00
Luka Murn
24dd25d9f5 Add edit/delete result comment functionality 
Lessons learned during this fix:
Don't use dependant: :destroy on both ends of association
between 2 ActiveRecords, or you will run into stack overflow.
 2016-08-25 13:51:31 +02:00
Luka Murn
bac0455435 Add edit&delete functionality to step comments 
This commit also:
* fixes a bug in permission_helper.rb,
* fixes comments.js a bit,
* adds 2 more re-renders of dropdown position calculations to canvas.js and projects/index.js.
 2016-08-25 13:51:31 +02:00
Luka Murn
c92d016f65 Add edit&delete module/task comments functionality 
This required a minor fix of comments.js.
 2016-08-25 13:51:31 +02:00