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15762 commits 31 branches 181 tags 166 MiB
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3397 commits

Author SHA1 Message Date
wandji
a59f94c5a9
Add RepositoryStockValueZipExport service and connect export consumption button [SCI-9023] (#6092) 
* Add RepositoryStockValueZipExport service and connect export consumption button [SCI-9023]

* Add consumption export modal and improve report generation [SCI-9023]

* Add repository_row association to repository_ledger_records [SCI-9023]
 2023-09-07 13:12:27 +02:00
Gregor Lasnibat
6934ae38aa Fix wrong OVE file size [SCI-9243] 2023-09-07 11:36:17 +02:00
Anton
1247406055 Add archive view to results [SCI-9223] 2023-09-06 15:06:27 +02:00
G-Chubinidze
3976e05042
Merge branch 'features/september-release' into gc_SCI_9178 2023-09-06 16:38:25 +04:00
Alex Kriuchykhin
eea24a69e9
Add FailureNotifiableJob jobs concerns for creating failure notifications for users [SCI-9119] (#6147) 2023-09-06 12:51:34 +02:00
Giga Chubinidze
5a6202aea2 Unable to create a MarvinJS attachment [SCI-9178] 2023-09-05 18:29:15 +04:00
aignatov-bio
7a32703c1a
Merge branch 'features/september-release' into ai-sci-9088-add-attachments-move-ability 2023-09-05 14:41:23 +02:00
aignatov-bio
647fb76910
Merge branch 'features/september-release' into ai-sci-9108-add-infinite-scroll 2023-09-05 14:40:03 +02:00
aignatov-bio
c33243b962
Merge pull request #6126 from aignatov-bio/ai-sci-9141-add-title-to-tinymce-fields 
Add title to text component [SCI-9141]
 2023-09-05 14:32:42 +02:00
Oleksii Kriuchykhin
2c816cf463 Merge branch 'release/1.28.0' into develop 2023-09-05 12:54:37 +02:00
Alex Kriuchykhin
5928f708e1
Remove user controlled method execution from connected_accounts controller, add Okta unlinking functionality [SCI-9220] (#6135) 2023-09-05 12:53:51 +02:00
Alex Kriuchykhin
90cd330126
Fix removing user from public projects [SCI-9174] (#6130) 2023-09-05 11:36:26 +02:00
artoscinote
8d352b758a
Merge pull request #6133 from ivanscinote/SCI-9182-rearranging-content-within-a-result-modal-translation 
Use act_as_list for reordering result elements, localize title for result reordering modal [SCI-9182]
 2023-09-05 11:09:08 +02:00
Ivan Kljun
56744e2dcd Use act_as_list for reordering result elements, localize title for result reordering modal [SCI-9182] 2023-09-05 11:02:39 +02:00
Giga Chubinidze
b7da98c1dd Archiving results doesn't work [SCI-9179] 2023-09-05 11:55:15 +04:00
Oleksii Kriuchykhin
7b40b43922 Merge branch 'release/1.28.0' into develop 2023-09-04 16:01:46 +02:00
Alex Kriuchykhin
df290ad3b3
Improve parameter filtering in activities filters and smart annotations [SCI-9218] (#6129) 2023-09-04 15:56:17 +02:00
Anton
86f413cc71 Add title to text component [SCI-9141] 2023-09-04 14:13:29 +02:00
Martin Artnik
3724a4a067 Merge branch 'develop' into features/september-release 2023-09-01 10:30:48 +02:00
Anton
d2ffaa209c Fix results CSS [SCI-9177] 2023-08-31 15:53:38 +02:00
Oleksii Kriuchykhin
b4eb4d38e6 Merge branch 'develop' into features/ove-integration 2023-08-31 15:52:38 +02:00
Anton
2d76e628be Add infinite scroll to results [SCI-9108] 2023-08-30 15:51:23 +02:00
Martin Artnik
8245ad9738 Fix up result element duplicate endpoints [SCI-9107] 2023-08-30 14:54:38 +02:00
Anton
c496d2c763 Fix transaction rollback [SCI-9088] 2023-08-30 11:48:16 +02:00
wandji
645b6dbe16
Add sort options to dashboard current task dropdown [SCI-9121] (#6103) 2023-08-30 09:51:41 +02:00
artoscinote
c955c235d2
Fix user assignment endpoints [SCI-9150] (#6094) 
* Fix project assignments API endpoint [SCI-9150]

* Fix API endpoint for updating experiment assignments [SCI-9150]

* Fix API endpoint for updating task assignments [SCI-9150]
 2023-08-29 10:32:39 +02:00
wandji
c80e99bdbc
Add protocol activity group for protocol step sequence assets [SCI-9087] (#6078) 2023-08-29 09:42:51 +02:00
artoscinote
90f23cc61c
Fix API endpoints for user assignments [SCI-9150] (#6089) 
* Fix project assignments API endpoint [SCI-9150]

* Fix API endpoint for updating experiment assignments [SCI-9150]

* Fix API endpoint for updating task assignments [SCI-9150]
 2023-08-28 15:13:30 +02:00
artoscinote
953bd234f4
Merge pull request #6065 from ivanscinote/SCI-9007-update-colors 
Update 'Not started' status color at reports [SCI-9007]
 2023-08-28 09:56:25 +02:00
Ivan Kljun
90199d3590 Add method light_color? to my_module_status [SCI-9007] 2023-08-25 15:47:34 +02:00
sboursen-scinote
195df7936f Use custom images for marvin and OVE [SCI-9038] 2023-08-25 13:59:18 +02:00
Anton
e66968357a Fix hound 2023-08-25 09:46:53 +02:00
ajugo
103b62798b
Return error if label template preview image is nil [SCI-9070] (#6077) 2023-08-24 16:45:34 +02:00
Anton
f31d2b8912 Add move ability to attachments [SCI-9088] 2023-08-24 15:57:03 +02:00
Alex Kriuchykhin
c1e2128b04
Fix link to original file in docx protocol parser notification [SCI-9123] (#6070) 2023-08-24 15:13:41 +02:00
Martin Artnik
0faad52f6c Merge branch 'hotfix/1.28.0.1' into develop 2023-08-24 12:14:30 +02:00
Alex Kriuchykhin
3c0389adc8
Make docx parser feature togglable [SCI-9094] (#6055) 2023-08-23 16:46:29 +02:00
artoscinote
0bea4a06ef
Add result duplicate action [SCI-8959] (#6019) 2023-08-23 15:05:31 +02:00
artoscinote
abd6e794e9
Merge pull request #6049 from artoscinote/ma_SCI_9013 
Implement result filters [SCI-9013]
 2023-08-23 15:03:24 +02:00
Anton
f964a7461d Move status block to secondary navigation [SCI-9027] 2023-08-23 14:03:41 +02:00
Alex Kriuchykhin
b08a94ced6
Remove What's new section from user preferences section [SCI-9098] (#6046) 2023-08-23 13:12:06 +02:00
artoscinote
e1416e3efd
Merge branch 'features/september-release' into ma_SCI_9013 2023-08-23 12:01:14 +02:00
Martin Artnik
b3965e5aca Implement result filters [SCI-9013] 2023-08-23 11:59:21 +02:00
Anton
3057ddd4cb Fix file name for result orderable 2023-08-23 11:36:53 +02:00
wandji
196b6628ae
Add task protocol activities for gene sequence asset actions [SCI-8965] (#6013) 2023-08-22 14:24:43 +02:00
Anton
e9174ad158 Add element movements between step [SCI-9024] 2023-08-22 12:15:55 +02:00
Andrej
29cddf5ef7 Merge branch 'develop' into features/ove-integration 2023-08-22 11:00:34 +02:00
Anton
2d64d2fcbf Merge branch 'develop' into features/september-release 2023-08-21 11:25:27 +02:00
artoscinote
20c20012b2
Merge pull request #5863 from ivanscinote/SCI-8807-notifications 
Remove system notifications [SCI-8807]
 2023-08-18 10:28:05 +02:00
Martin Artnik
23a8872e11 Add some basic result component layout [SCI-8959] 2023-08-17 16:32:42 +02:00
ajugo
813347dcf0
Merge pull request #6000 from rekonder/aj_SCI_8948 
Create new sequence attachment on task protocol step [SCI-8948]
 2023-08-17 15:57:23 +02:00
Soufiane
4f1ea84489
Add the promotion screen for Sequence editor (OVE) [SCI-8968] (#6007) 2023-08-17 15:39:32 +02:00
Oleksii Kriuchykhin
14e49956f7 Show only default label templates when feature is disabled [SCI-9028] 2023-08-17 13:44:22 +02:00
Andrej
6e8dda64b2 Create new sequence attachment on task protocol step [SCI-8948] 2023-08-17 09:38:44 +02:00
Anton
ea299919e3 Fix results api [SCI-9012] 2023-08-16 11:45:37 +02:00
Martin Artnik
8d31c5eb3b Merge branch 'develop' into features/ove-integration 2023-08-16 10:41:26 +02:00
Oleksii Kriuchykhin
5332cbc788 Pass user by id instead of serialized object for deleyed jobs [SCI-9053] 2023-08-11 15:31:29 +02:00
Anton
6e5fa5ccd7 Add create actions [SCI-8953] 2023-08-11 15:04:49 +02:00
wandji
f8a3640c4c
Move snapshot of deleted inventories to the bottom of inventory list in report wizard [SCI-8487] (#5972) 2023-08-11 13:37:26 +02:00
Anton
f6191dbb67 Add elements and attachments to new result [SCI-8953] 2023-08-11 11:03:26 +02:00
Martin Artnik
16dbd48ad3 Merge branch 'develop' into features/september-release 2023-08-10 13:21:27 +02:00
ajugo
5157f86b56
Merge pull request #5952 from ivanscinote/SCI-9025-show-label-preview 
Allow zpl_preview Access Regardless of Label Template ENV Status [SCI-9025]
 2023-08-10 09:54:08 +02:00
Andrej
104a9d5c17 Implemented trial period for open vector editor [SCI-8962] 2023-08-10 08:58:49 +02:00
Ivan Kljun
0b4afdd9ad Enable showing Label preview even if Label template is disabled [SCI-9025] 2023-08-09 17:01:30 +02:00
Martin Artnik
a952319afd Merge branch 'develop' into features/september-release 2023-08-09 16:43:15 +02:00
wandji20
02115cf967 Wrap timestamp filter params in the filter attribute [SCI-8738-updated] 2023-08-09 08:25:01 +01:00
Anton
758b28261d Merge branch 'develop' into features/september-release 2023-08-07 16:30:28 +02:00
Martin Artnik
11fb166a0c Migration fix, additional endpoints, cleanup [SCI-8947] 2023-08-07 16:09:15 +02:00
Martin Artnik
633abf69c0 Basic results toolbar implementation [SCI-8952] 2023-08-07 16:09:15 +02:00
Martin Artnik
fd55aa21a6 Basic results component and structure [SCI-8947] 2023-08-07 16:09:13 +02:00
wandji
8546d451d3 Add result_orderable_elements_controller and update activities [SCI-8882] (#5880) 2023-08-07 16:08:06 +02:00
Anton
5aa01716ef Fix bundling for deleted files 2023-08-07 15:42:13 +02:00
Anton
7961bee35f Merge branch 'develop' into features/september-release 2023-08-07 14:11:29 +02:00
Alex Kriuchykhin
dacc6b48aa
Merge pull request #5924 from scinote-eln/features/protocol-parsing 
Merge features/protocol-parsing to develop
 2023-08-07 13:00:56 +02:00
Oleksii Kriuchykhin
6cf7403b21 Merge branch 'develop' into features/protocol-parsing 2023-08-07 12:55:20 +02:00
aignatov-bio
be4bd7f038
Merge pull request #5922 from scinote-eln/features/remove-front-end-gems 
Features/remove front end gems
 2023-08-07 11:31:12 +02:00
Anton
89c526103d Merge branch 'develop' into features/remove-front-end-gems 2023-08-07 11:23:21 +02:00
ajugo
6f76e86171
Implement results tab for shareable task link [SCI-8753] (#5910) 
* Implement results tab for shareable task link [SCI-8753]
 2023-08-07 10:45:52 +02:00
Anton
937bc60542 Merge branch 'features/september-release' of github.com:scinote-eln/scinote-web into features/september-release 2023-08-07 10:37:20 +02:00
Anton
89d7241f60 Merge branch 'develop' into features/september-release 2023-08-07 10:35:15 +02:00
ajugo
9a55889264
Merge pull request #5919 from okriuchykhin/ok_SCI_8974 
Fix file URL generation on shared task page [SCI-8974]
 2023-08-07 08:56:05 +02:00
Oleksii Kriuchykhin
c61a075818 Fix file URL generation on shared task page [SCI-8974] 2023-08-04 15:09:59 +02:00
Alex Kriuchykhin
b365553a14
Merge pull request #5917 from scinote-eln/features/august-release 
Merge features/august release to develop
 2023-08-04 14:01:44 +02:00
Soufiane
f856ddf78c
Assigned items in task datatable will not load if stock management is enabled [SCI-8944] (#5904) 
* Fix assigned items datatable in shareable link with stock management [SCI-8944]

* Avoid skipping auth token verification for assets download [SCI-8944]
 2023-08-04 11:21:43 +02:00
Alex Kriuchykhin
a943ea2dd7
Merge pull request #5888 from wandji20/wb-SCI-8907 
Create step orderable element for step_text when creating a step via the API [SCI-8907]
 2023-08-03 14:19:05 +02:00
wandji20
90b3f8943a Improve api step controller create action [SCI-8907] 2023-08-03 04:08:26 +01:00
Oleksii Kriuchykhin
b49b7c4a80 Merge branch 'develop' into features/shareable-links 2023-08-02 16:05:21 +02:00
Martin Artnik
80c5268efd Add read-only mode to OVE [SCI-8962] 2023-08-02 15:46:07 +02:00
wandji
31f8bc19d5
Add unique database index to checklist items position (#5886) 
* Add unique database index to checklist items position and update errors to render flash message when a checklist item validation fails [SCI-8841]

* Improve protocol checklist item reordering [SCI-8841]

* Add act as list to gemfile and use sequential updates for reodering with act_as_list [SCI-8841]
 2023-08-02 15:37:01 +02:00
Martin Artnik
76a0f433cd Basic OVE editor implementation [SCI-8929] 2023-08-02 14:13:04 +02:00
ivanscinote
242df0632d
Merge branch 'features/august-release' into SCI-8807-notifications 2023-08-02 13:40:06 +02:00
wandji20
88b7befbcd Create step orderable element for step_text when creating a step via the API [SCI-8907] 2023-08-01 19:55:36 +01:00
wandji20
a0372d14bf Improve base controller timestamp filter method [SCI-8738] 2023-08-01 18:59:58 +01:00
ajugo
fa187f3b31
Add shared assets download and fix loading of the shareable button on task [SCI-8754] (#5878) 
* Add shared assets download and fix loading of the shareable button on task [SCI-8754]

* Add additional check before asset loading [SCI-8754]

* Add additional check before asset loading [SCI-8754]

* Load asset for specific task [SCI-8754]
 2023-08-01 16:46:41 +02:00
wandji20
07411fbc25 Refactor base controller timestamp filter method [SCI-8738] 2023-08-01 13:25:17 +01:00
Soufiane
3f3064ba19
Fix Auth issues task public view [SCI-8936] (#5890) 2023-08-01 14:23:48 +02:00
Soufiane
8d6c417936
Extract date formatting from user browser in shareable links views [SCI-8778] (#5889) 2023-08-01 10:38:00 +02:00
wandji20
1e64a246fe Rename filter_timestamps_range to timestamp_filters [SCI-8738] 2023-07-31 11:21:40 +01:00
wandji20
8e96c2427a Add options to filter records by created_at or updated_at timestamps [SCI-8738] 2023-07-27 01:31:57 +01:00
Martin Artnik
3978d9efef Merge branch 'develop' into features/august-release 2023-07-26 11:22:49 +02:00
Ivan Kljun
216f01f151 Apply hounder linter styling suggestions 2023-07-25 15:58:40 +02:00
Ivan Kljun
18fb319351 Drop system notifications tables and remove logic 2023-07-25 14:48:03 +02:00
Soufiane
4858f41b3e
Remove user_team related tests [SCI-8815] (#5860) 2023-07-25 14:35:17 +02:00
Alex Kriuchykhin
026e96652b
Fix team name escaping in inventories export modal [SCI-8922] (#5859) 2023-07-25 13:37:45 +02:00
Ivan Kljun
685ec1dddd Clear flash messages at redirect from root path 2023-07-25 11:10:45 +02:00
Oleksii Kriuchykhin
de69b1b100 Merge branch 'develop' into features/shareable-links 2023-07-25 09:47:47 +02:00
artoscinote
c3d9488e9f
Fix canvas tag issues [SCI-8917] (#5849) 2023-07-24 17:05:48 +02:00
aignatov-bio
67a8729b41
Merge pull request #5847 from aignatov-bio/ai-sci-8880-clean-up-step-elements 
Prepare step components for results refactor [SCI-8880]
 2023-07-24 14:17:55 +02:00
Alex Kriuchykhin
2489084566
Fix handling of responses in WOPI controller [SCI-8856] (#5838) 2023-07-21 13:25:36 +02:00
artoscinote
7d62a805a3
Upgrade roo to work with Ruby 3, fix rendering of import modal [SCI-8903] (#5836) 2023-07-21 12:48:32 +02:00
aignatov-bio
160bc270b6
Merge pull request #5834 from aignatov-bio/ai-sci-8912-fix-characters-escaping 
Fix escape issues [SCI-8912]
 2023-07-21 11:53:27 +02:00
Alex Kriuchykhin
7cb8feefb9
Fix permission checking in WOPI controller [SCI-8856] (#5833) 2023-07-21 11:53:10 +02:00
Anton
5394fee3db Fix escape issues [SCI-8912] 2023-07-21 11:48:19 +02:00
aignatov-bio
cca978dc5a
Merge pull request #5824 from aignatov-bio/ai-sci-8890-fix-navigator-render-for-active-folders 
Fix navigator render for active folder with archived elements [SCI-8890]
 2023-07-21 10:36:35 +02:00
Anton
2a47909e32 Update step text element [SCI-8880] 2023-07-21 10:35:14 +02:00
Alex Kriuchykhin
8aa06bf4af
Fix generation of docx report, fix rendering of modals [SCI-8911] (#5831) 2023-07-20 16:46:16 +02:00
Alex Kriuchykhin
31880521ef
Fix displaying of file previews, refactor file analyzer [SCI-8892] (#5818) 2023-07-20 12:59:45 +02:00
ajugo
c4d6fc55af
Fix marvinjs file preview in RTF [SCI-8904] (#5819) 2023-07-20 11:26:58 +02:00
Soufiane
c12023f8aa
Remove user_team model and related code [SCI-8815] (#5815) 2023-07-20 10:57:29 +02:00
artoscinote
b0f45713cf
Merge pull request #5826 from G-Chubinidze/gc_SCI_8820 
Error at inviting user to SciNote [SCI-8820]
 2023-07-20 10:47:19 +02:00
Giga Chubinidze
4645489527 fixed teams for dropdown 2023-07-20 12:46:31 +04:00
Anton
0c5d9eb23b Fix navigator render for active folder with archived elements [SCI-8890] 2023-07-20 10:18:05 +02:00
Andrej
37d8ac6cd6 Fix shareable links after develop merge 2023-07-20 09:39:17 +02:00
Anton
b0b8427f53 Fix edit file result [SCI-8902] 2023-07-19 14:56:29 +02:00
Andrej
f493ec0da1 Merge branch 'develop' into features/shareable-links 2023-07-19 12:57:20 +02:00
Martin Artnik
5cc087835a Merge branch 'develop' into features/august-release 2023-07-19 11:21:24 +02:00
aignatov-bio
4b2f520779
Merge pull request #5788 from aignatov-bio/ai-sci-8870-fixed-rtf-preview-for-new-files 
Fix rtf preview for new images [SCI-8870]
 2023-07-19 09:57:56 +02:00
Anton
36ffe3a444 Fix asset result edit mode [SCI-8891] 2023-07-19 09:42:00 +02:00
Giga Chubinidze
6bfbb83df5 Error at inviting user to SciNote 2023-07-19 11:07:17 +04:00
Anton
1087f67228 Merge branch 'develop' into features/remove-front-end-gems 2023-07-18 14:36:40 +02:00
aignatov-bio
bab8e2c330
Merge pull request #5796 from aignatov-bio/ai-sci-8883-fix-snapshot-table-render 
Fix snapshot table render [SCI-8883]
 2023-07-18 14:16:13 +02:00
wandji
7dcc774414
Refactor html partial rendering in json responses [SCI-8811] (#5763) 
* Remove redundant use of respond_to in controlller actions with just one responder format [SCI-8811]

* Remove redundant begin block and replace 303 status code with :see_other [SCI-8811]
 2023-07-18 13:36:41 +02:00
Anton
f710691709 Fix snapshot table render [SCI-8883] 2023-07-18 11:43:55 +02:00
Anton
d37f335f17 Fix rtf preview for new images [SCI-8870] 2023-07-18 11:08:39 +02:00
artoscinote
e79c73f8c4
Merge pull request #5777 from wandji20/wb-SCI-8851 
Fix issue archiving task result tables and when downloading archived result table
 2023-07-18 08:18:11 +02:00
Soufiane
5736c444f6
Remove not used code for global activities [SCI-4851] (#5773) 
* Fix broken task/activity [SCI-4851]

* Remove unused code for global activities [SCI-4851]
 2023-07-17 15:36:22 +02:00
wandji
063c1209ba
Fix issue when viewing task repository snapshot [SCI-8871] (#5785) 2023-07-17 13:15:04 +02:00
Anton
bd1e81f894 Fix preview generation [SCI-8855] 2023-07-17 13:05:33 +02:00
wandji20
3ee5049654 Fix issue archiving task result tables and when downloading archived tables [SCI-8851] 2023-07-15 11:33:44 +01:00
wandji
ebe1bd583f
Fix issue json response for creating result table [SCI-8853] (#5768) 
* Fix issue json resposnse for creating result table [SCI-8853]

* Fix linter errors [SCI-8853]

* Fix linter errors [SCI-8853]

* Fix issues when editing and updating results text/table for task [SCI-8853]

* Fix linter errors [SCI-8853]
 2023-07-14 12:30:36 +02:00
Oleksii Kriuchykhin
a95aab85e2 Merge branch 'develop' into features/shareable-links 2023-07-13 15:04:27 +02:00
Oleksii Kriuchykhin
092e451f2e Merge branch 'develop' into features/protocol-parsing 2023-07-13 13:59:10 +02:00
Oleksii Kriuchykhin
fca9aea4a8 Merge branch 'features/rails-upgrade' into develop 2023-07-13 13:10:59 +02:00
Alex Kriuchykhin
d419608f18
Connect protocol parsing service to rails backend [SCI-8817] (#5759) 2023-07-13 11:41:53 +02:00
Soufiane
78d8a54e0d
Remove BMT and bioeddie from Scinote [SCI-8643] (#5760) 2023-07-13 09:45:53 +02:00
Soufiane
6d98b0c235
Reports - Issues after rails upgrade [SCI-8830] (#5758) 
* Fix reports issues after rails upgrade [SCI-8830]

* Fix report image assets [SCI-8830]
 2023-07-12 15:42:34 +02:00
G-Chubinidze
ac399e5722
Activities - Issues after rails upgrade [SCI-8824] (#5755) 2023-07-12 11:11:10 +02:00
Soufiane
2f669c93d5
Fix projects issues after rails upgrade [SCI-8827] (#5754) 2023-07-12 11:10:17 +02:00
ajugo
32fc7698d2
Implement welcome modal for shareable links [SCI-8748] (#5729) 2023-07-11 16:01:42 +02:00
Alex Kriuchykhin
b852cf92fe
Fix displaying of tinyMCE images in search results [SCI-8823] (#5751) 2023-07-11 14:47:15 +02:00
ajugo
632716e2cd
Remove task manage permission [SCI-8528] (#5672) 2023-07-11 09:29:17 +02:00
artoscinote
4a8582ebc8
Initial implementation of protocol processing modal [SCI-8661] (#5683) 
* Initial implementation of protocol processing modal [SCI-8661]

* Prepare placeholder jobs and integrate notifications [SCI-8661]
 2023-07-11 09:27:15 +02:00
Soufiane
d8658991d6
Fix task page issues after rails upgrade [SCI-8821] (#5745) 2023-07-11 09:21:22 +02:00
Soufiane
6aaa68f320
Fix reports issues after rails upgrade [SCI-8830] (#5748) 2023-07-11 09:20:29 +02:00
Soufiane
e8c62d6cd8
Fix protocol template issues after rails upgrade [SCI-8822] (#5740) 2023-07-10 13:57:13 +02:00
Soufiane
b44678d09a
Switch to keyword parameters in i18n.t [SCI-8810] (#5739) 2023-07-07 14:55:51 +02:00
Soufiane
8fb14645bf
Match protocol template print permissions to show [SCI-8803] (#5726) 2023-07-07 11:01:31 +02:00
ajugo
6c6fc404d2
Implement task shareable modal [SCI-8651] (#5723) 
* Implement task shareable modal [SCI-8651]

* Fix routes [SCI-8651]

* Clean code for vue share button initilization [SCI-8651]
 2023-07-06 16:05:03 +02:00
Soufiane
33bb79d17a
Implement details and notes sections of shareable links [SCI-8750] (#5710) 
Co-authored-by: Sboursen <dev.sboursen@gmail.com>
 2023-07-06 15:10:26 +02:00
Soufiane
6049c7d8b9
Activities for shareable links [SCI-8652] (#5694) 
Define new activities for task shareable links [SCI-8652]
 2023-07-06 15:01:32 +02:00
Anton
4b82ba9613 Merge branch 'features/rails-upgrade' into features/remove-front-end-gems 2023-07-06 11:14:48 +02:00
Soufiane
94ead579e6
Create the general layout for shareable links [SCI-8749] (#5699) 2023-07-06 09:19:29 +02:00
ajugo
836d1b6be1
Add permissions for shareable links and some fixes for controller [SCI-8747] (#5709) 
Add permissions for shareable links and som fixes for controller [SCI-8747]
 2023-07-05 16:21:26 +02:00
Alex Kriuchykhin
5f1c6bf2f0
Fix multiple issues after Rails upgrade [SCI-8780] (#5716) 2023-07-05 12:43:23 +02:00
Alex Kriuchykhin
b7e04972e1
Implement model and controller for shareable links, update team model [SCI-8648] (#5693) 2023-07-03 15:54:11 +02:00
artoscinote
1e8304d883
Merge pull request #5697 from wandji20/wb-SCI-8487 
Add filter to remove archived inventories from report widget [SCI-8487]
 2023-07-03 14:48:23 +02:00
ajugo
6dc4b646c5
Add handling for deleted ActiveStorage files [SCI-8264] (#5624) 
Add handling for deleted ActiveStorage files [SCI-8264]
 2023-07-03 13:13:19 +02:00
Anton
b956f9de25 Remove bootstrap form 2023-07-03 12:59:13 +02:00
Martin Artnik
c7d992ab83 Fixes for saving of result table metadata [SCI-8774] 2023-07-03 12:35:29 +02:00
Martin Artnik
0f3b524492 Fix and amend result table metadata saving [SCI-8774] 2023-06-30 14:11:03 +02:00
wandji20
eb017ff564 Add filter to remove archived inventories from report widget [SCI-8487] 2023-06-30 02:22:57 +01:00
ajugo
563605e6ef
Implement share task toggle on settings page [SCI-8647] (#5686) 2023-06-28 11:47:41 +02:00
Giga Chubinidze
a2aab6cbeb Parsing (import) protocols - Notifications update [SCI-8693] 2023-06-28 09:05:11 +04:00
artoscinote
5fe463d293
Merge pull request #5674 from sboursen-scinote/sb_SCI-8164-8726 
[SCI-8164][SCI-8726]
 2023-06-26 15:43:29 +02:00
sboursen-scinote
706c2e492b Fix CSS and icon inconsistencies [SCI-8164][SCI-8726] 
- Use the correct arrow-left/arrow-right icons.
- Show the tasks of active experiments in archived branch in the Navigator.
- Fix minor style issues in P/E/T.

Co-authored-by: Sboursen <dev.sboursen@gmail.com>
 2023-06-26 15:22:36 +02:00
artoscinote
fa60cb6589
Merge pull request #5664 from G-Chubinidze/gc_SCI_8476 
Breadcrumbs on label/protocol template page [SCI-8476]
 2023-06-26 13:00:19 +02:00
Soufiane
fdc4f4ddd7
Create an export_limit_exceeded model for repositories export [SCI-8730] (#5667) 
Co-authored-by: Sboursen <dev.sboursen@gmail.com>
 2023-06-23 12:10:58 +02:00
Giga Chubinidze
ef94a4f2bb logic refactor, url removal 2023-06-23 13:39:54 +04:00
artoscinote
496fbc9eca
Merge pull request #5653 from rekonder/aj_SCI_8719 
Remove breadcrumbs project table and fix project filtering [SCI-8719]
 2023-06-23 09:54:00 +02:00
Oleksii Kriuchykhin
e86f0e76de Fix breadcrumbs for archived view mode [SCI-8710] 2023-06-22 15:41:37 +02:00
Andrej
3d2f9eae1e Remove breadcrumbs project table and fix filtering [SCI-8719] 2023-06-22 13:44:27 +02:00
Oleksii Kriuchykhin
66b361c689 Upgrade Rails to version 7.0.5 [SCI-8632] 2023-06-21 14:38:32 +02:00
artoscinote
4fe0ad026d
Change the way ConnectedDevice logging is added to TokensController [SCI-8287] (#5634) 2023-06-20 12:50:36 +02:00
sboursen-scinote
ef16771f00 Add breadcrumbs to Fluics page [SCI-8675] 
Co-authored-by: Sboursen <dev.sboursen@gmail.com>
 2023-06-19 12:20:53 +02:00
Soufiane
966b92e8d2
Activities update for grant project access to all team members [SCI-8383] (#5598) 
* Create new activities for granting/revoking access to all team members on projects [SCI-8383]
 2023-06-16 13:08:02 +02:00
Soufiane
b254f5614b
Inventory export FE [SCI-6546] (#5608) 
* Implement the front-end part of inventory export functionality [SCI-6546]

- Add the export button to the action toolbar
- Create new modal and link it to the export repository action
- Update the global export limit counter

* Remove load_repository and check_view_permission for export_repositories [SCI-6546]
 2023-06-16 10:48:39 +02:00
Anton
d795f996f2 Merge branch 'develop' into features/ui-revamp 2023-06-14 15:18:50 +02:00
G-Chubinidze
0ad1540a41
Merge branch 'features/ui-revamp' into gc_SCI_8511 2023-06-14 17:02:18 +04:00
Giga Chubinidze
41d42d47bd update addon controller 2023-06-14 05:15:18 +04:00
Giga Chubinidze
88df4b2a11 Settings page - breadcrumbs [SCI-8511] 2023-06-14 05:13:33 +04:00
Soufiane
23e248ca02
Changed wording for activities [SCI-8243] (#5356) 
* Change wording for access activities in projects and protocols [SCI-8243]
* Add project activity for changing all team members role via project option-edit [SCI-8243]
 2023-06-13 16:55:40 +02:00
artoscinote
820bf7808a
Merge pull request #5586 from G-Chubinidze/gc_SCI_8476 
Breadcrumbs on label/protocol template page [SCI-8476]
 2023-06-13 14:49:14 +02:00
Anton
b434c8a2c7 Update css for team selection and search field [SCI-8540] 2023-06-13 11:52:14 +02:00
Giga Chubinidze
673718f1db Breadcrumbs on label/protocol template page [SCI-8476] 2023-06-13 11:25:14 +04:00
artoscinote
91aab57914
Merge pull request #5580 from sboursen-scinote/sb_SCI-8545 
Improvement of dropdown in Assign to task modal [SCI-8545]
 2023-06-12 14:38:16 +02:00
Anton
16d4a09cfa Update left navigation 2023-06-12 14:23:26 +02:00
Soufiane
2e16302812
Team admin can see all projects in Navigator [SCI-8549] [SCI-8381] (#5575) 
Disable project links if team admin is missing read permission [SCI-8381]
 2023-06-12 12:55:32 +02:00
sboursen-scinote
43bf1cf0eb Add loading state to select_search [SCI-8545] 
Co-authored-by: Sboursen <dev.sboursen@gmail.com>
 2023-06-12 10:49:31 +02:00
Alex Kriuchykhin
f0c2624179
Implement inventories export backend logic [SCI-8444] (#5578) 2023-06-12 10:29:17 +02:00
artoscinote
98cb0df46b
Fix issues with assign to task dropdowns [SCI-8588] (#5568) 2023-06-06 15:31:40 +02:00
Alex Kriuchykhin
eacf2c0c23
Use correct permissions in repository row assigning filters [SCI-8616] (#5565) 2023-06-06 13:53:12 +02:00
Alex Kriuchykhin
3869475e3d
Fix links to archived items in breadcrumbs [SCI-8562] (#5538) 2023-06-01 14:28:47 +02:00
Alex Kriuchykhin
d4fb499a17
Fix task archiving permissions, archived labels in breadcrumbs [SCI-8586] (#5535) 2023-06-01 11:31:54 +02:00
ajugo
d3006c9862
Fix archive/restore of protocol templates [SCI-8579] (#5521) 2023-05-31 09:38:24 +02:00
ajugo
14b3a1318b
Fix empty page for inventory and fix task title [SCI-8556] (#5511) 
* Remove empty state for inventory [SCI-8556]

* Fix shrinking of the task title on task page [SCI-8556]
 2023-05-30 11:19:10 +02:00
Alex Kriuchykhin
9819425ba1
Fix displaying of archived folders in active view [SCI-8542] (#5513) 2023-05-30 11:14:24 +02:00
Alex Kriuchykhin
d4afd5be8f
Fix folders display in the navigator [SCI-8542] (#5496) 2023-05-29 11:49:39 +02:00
ajugo
2e9fe37040
Fix repository table reloading and flash messages [SCI-8554] (#5504) 
* Fix repository table reloading and flash messages [SCI-8554]

* Pass function for repository reload [SCI-8554]
 2023-05-29 11:48:13 +02:00
artoscinote
f233d4d73f
Merge pull request #5499 from G-Chubinidze/gc_SCI_8448 
breadcrumb css issue & archive projects url fix [SCI-8448]
 2023-05-29 10:22:22 +02:00
Giga Chubinidze
1039d784d3 fixed archive projects breadcrumb link url 2023-05-28 03:46:04 +04:00
aignatov-bio
876987bc70
Merge pull request #5490 from aignatov-bio/ai-sci-8504-css-issues-on-task 
Fix css issues on task [SCI-8504]
 2023-05-26 17:10:09 +02:00
aignatov-bio
642932bbcc
Merge pull request #5475 from rekonder/aj_SCI_8490 
Add empty states for PET [SCI-8490]
 2023-05-26 11:14:38 +02:00
Anton
6716a5880e Fix css issues on task [SCI-8504] 2023-05-26 11:12:47 +02:00
Soufiane
6c43cb6dad
Add breadcrumbs to archived results page [SCI-8087] (#5485) 
Co-authored-by: Sboursen <dev.sboursen@gmail.com>
 2023-05-25 16:49:33 +02:00
Andrej
9164534548 Add empty states for PET [SCI-8490] 2023-05-24 18:15:41 +02:00
G-Chubinidze
3ea85cb2ef
Remove old client_api code [SCI-8144] (#5223) 
Remove obsolete client_api code
 2023-05-24 12:45:31 +02:00
aignatov-bio
4a3520883b
Merge pull request #5416 from G-Chubinidze/gc_SCI_8299 
Implement the bottom action toolbar - inventories [SCI-8299]
 2023-05-24 12:06:47 +02:00
aignatov-bio
56a36e96da
Merge pull request #5471 from aignatov-bio/ai-sci-8508-fixed-navigator-folder-controller 
Fix navigator folder controller [SCI-8508]
 2023-05-24 11:10:44 +02:00
Anton
cd8b49f220 Fix navigator folder controller [SCI-8508] 2023-05-24 11:04:12 +02:00
aignatov-bio
5c3ebc2509
Merge pull request #5459 from G-Chubinidze/gc_SCI_8404 
(A) label for archived projects, inventories and protocol tempates in breadcrumbs [SCI-8404]
 2023-05-24 10:53:23 +02:00
Soufiane
f21dc998b9
Add filtering for project/experiment filter for assignable tasks [SCI-8442] (#5441) 
* Remove object without  edit permission in P/E/T filters [SCI-8442]

* Leave only experiments and projects with active tasks [SCI-8442]
 2023-05-24 10:47:27 +02:00
Giga Chubinidze
379ef7a9cc moved to develop, fixed pagination style 2023-05-24 11:57:06 +04:00
Giga Chubinidze
b20912c52e removed unnecessary code 2023-05-24 02:54:05 +04:00
Giga Chubinidze
e553909755 moved logic to controllers & concern 2023-05-24 02:52:26 +04:00
Andrej
fe2ae09a25 Fix active table experiment loading [SCI-8503] 2023-05-23 17:15:09 +02:00
ajugo
040b3bddce
Add state switch to experiment level for archived experiments [SCI-8503] (#5464) 2023-05-23 15:29:14 +02:00
Alex Kriuchykhin
1a430a77fd
Add filtering option for active/archived PET listing API endpoints, add linked tasks to protocol serializer [SCI-7091] (#4381) 2023-05-19 11:34:31 +02:00
Andrej
100eab9cb0 Merge branch 'develop' of https://github.com/biosistemika/scinote-web into features/plate_templates 2023-05-18 10:56:10 +02:00
artoscinote
ef0bf65c19
Merge pull request #5424 from G-Chubinidze/gc_SCI_8302 
Implement the bottom action toolbar - reports [SI-8302]
 2023-05-18 09:44:53 +02:00
Alex Kriuchykhin
0cc253172f
Merge pull request #5326 from rekonder/aj_SCI_8082 
Reverse table header/row numbering for plate templates [SCI-8082]
 2023-05-18 09:34:19 +02:00
Giga Chubinidze
f161354f1b Implement the bottom action toolbar - reports [SI-8302] 2023-05-18 00:42:16 +04:00
Soufiane
adaa2b6a48
Extend flash messages for direct task items assignment [SCI-8443] (#5414) 
Update item assigment modal flash messages [SCI-8443]
 2023-05-17 16:17:19 +02:00
Martin Artnik
eb5fb16b1b Implement new toolbar for protocols [SCI-8399] 2023-05-17 14:12:40 +02:00
Alex Kriuchykhin
5a06f649d6
Merge pull request #5417 from scinote-eln/features/sa-item-assigning 
Features/sa item assigning
 2023-05-17 11:45:13 +02:00
artoscinote
aeb84e18d0
Implement bottom action toolbar for repository items [SCI-8300] 
Implement bottom action toolbar for repository items [SCI-8300]
 2023-05-17 11:27:55 +02:00
Andrej
32d8fc3e0c Merge branch 'develop' of https://github.com/biosistemika/scinote-web into features/sa-item-assigning 2023-05-16 14:26:12 +02:00
ajugo
43f571c154
Enable Manage access for archived protocols [SCI-8453] (#5411) 2023-05-16 13:25:33 +02:00
Martin Artnik
c8994573fd Add bottom action toolbar to label templates [SCI-8301] 2023-05-16 11:40:07 +02:00
ajugo
f7087a7c24
Switch team for label template opening [SCI-8377] (#5402) 2023-05-16 11:23:32 +02:00
artoscinote
cf13160c4f
Merge pull request #5398 from aignatov-bio/ai-sci-8405-improve-navigation-in-archive-state 
Improve navigation in archive state [SCI-8405]
 2023-05-16 10:38:37 +02:00
ajugo
c6f5219043
Display all protocol templates for team admin [SCI-8379] (#5391) 2023-05-16 10:29:00 +02:00
ajugo
31b42dc875
Add metadata to table API endpoints [SCI-8376] (#5388) 2023-05-16 10:26:09 +02:00
Anton
9b2ae96a43 Merge branch 'develop' into features/navigation-refactor-v2 2023-05-16 10:22:11 +02:00
Anton
08652e9dde Improve navigation in archive state [SCI-8405] 2023-05-11 13:14:56 +02:00
Anton
8f5560b016 Add barcode search field [SCI-8283] 2023-05-11 11:21:50 +02:00
Soufiane
b1ccd5839b
Implement backend for inventory item assignment to tasks [SCI-8248] (#5367) 
Implement backend for inventory item assignment to tasks [SCI-8248]
 2023-05-10 16:12:20 +02:00
Alex Kriuchykhin
ab318df1af
Update permissions for team owner to see all protocols and can manage users [SCI-8380] (#5371) 2023-05-09 16:23:29 +02:00
ajugo
783d5d03ab
Add edit button to label templates and fix last updated by [SCI-8373] (#5376) 2023-05-08 11:27:29 +02:00
Andrej
97bde133a8 Fix plate template JSON creation [SCI-8082] 2023-05-08 10:25:50 +02:00
Martin Artnik
7a6fe5050d Fix project folder delete action [SCI-8391] 2023-05-04 14:59:16 +02:00