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3566 commits 43 branches 185 tags 169 MiB
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411 commits

Author SHA1 Message Date
Luka Murn
3e80f761b8 Add "about" modal, prepare hooks, VERSION system for addons 
Also the addon generator is fixed so it properly creates VERSION
file for new addons.
 2017-07-10 15:27:50 +02:00
mlorb
025050a7cd Merge pull request #716 from mlorb/ml-sci-1420 
Add tooltips to navigation bar [SCI-1420]
 2017-06-27 14:52:07 +02:00
Mojca Lorber
d03be76f35 add tooltips to archive buttons 2017-06-27 14:48:45 +02:00
Mojca Lorber
6bfb5e125c add tooltips to navigation bar 2017-06-27 13:46:49 +02:00
okriuchykhin
d126391940 Merge pull request #710 from okriuchykhin/ok_SCI_1356 
Add global search in custom repositories [SCI-1356]
 2017-06-27 13:41:53 +02:00
mz3944
ca59ac5e36 Merge pull request #714 from mz3944/mz-SCI-1402 
Missing error message when not selecting name in case of import repository file [SCI-1402]
 2017-06-27 11:54:26 +02:00
Matej Zrimšek
f847b44067 Error is displayed and import is prevented in case repository name column is not mapped, when importing repository items from file. [SCI-1402] 2017-06-26 16:50:40 +02:00
Oleksii Kriuchykhin
84556cf744 Fix naming of repository items in modal and messages [SCI-1404] 2017-06-26 16:03:02 +02:00
Oleksii Kriuchykhin
e038bc58fa Add global search in custom repositories [SCI-1356] 2017-06-23 16:12:56 +02:00
Matej Zrimšek
be855e98db Changed repository records filter naming. [SCI-1398] 2017-06-23 10:16:50 +02:00
zmagod
bad52ceff1 Merge branch 'master' of https://github.com/biosistemika/scinote-web into zd_SCI_1336 2017-06-21 15:56:07 +02:00
zmagod
f66fb49b56 adds import records to repositories [fixes SCI-1336] 2017-06-21 14:45:50 +02:00
zmagod
f64e1ac713 fix locales 2017-06-21 09:31:39 +02:00
Mojca Lorber
86530bbda0 fix flash text 2017-06-16 14:41:50 +02:00
Mojca Lorber
4566fc7191 fix text in activity for assign/unassign records message 2017-06-15 10:06:12 +02:00
Mojca Lorber
77d922a5e8 change the name of add record/repository in repositories 2017-06-13 09:45:18 +02:00
zmagod
a865253a2e first run 2017-06-13 08:10:10 +02:00
rekonder
ede744849b Export repository [aj-SCI-1275] 2017-06-09 19:44:28 +02:00
Luka Murn
e26337d5ee Merge pull request #671 from biosistemika/custom-repositories 
Merge custom-repositories into master
 2017-06-09 18:46:47 +02:00
Zmago Devetak
4873624cec Merge pull request #658 from ZmagoD/zd_SCI_1011 
Multiple file upload with drag & drop capability in steps and results
 2017-06-09 10:03:33 +02:00
Luka Murn
810599bef2 Fix en.yml localization bug 2017-06-08 13:36:37 +02:00
Luka Murn
2ab31aba2f Merge pull request #660 from Ducz0r/lm-sci-1270 
Copy repository functionality [SCI-1270]
 2017-06-08 11:45:57 +02:00
Luka Murn
27feb46d8f Merge pull request #659 from Ducz0r/lm-sci-1279 
Include repositories in reports [SCI-1279]
 2017-06-08 11:24:21 +02:00
Luka Murn
61eb52f86f Implement GUI for copying repositories 
Closes SCI.1270.
 2017-06-07 19:11:25 +02:00
Luka Murn
38361e4bb4 Setup initial GUI 2017-06-07 18:43:48 +02:00
Matej Zrimšek
77a225ec31 Added toggle between assigned and all repository records. [SCI-1276] 2017-06-07 18:13:25 +02:00
Luka Murn
b5f6d1da94 Allow custom repositories to be added to reports 2017-06-07 16:54:32 +02:00
Oleksii Kriuchykhin
c18bba9fbe Fix rebase errors [SCI-1274] 2017-06-07 15:50:22 +02:00
Oleksii Kriuchykhin
8b1190060e Add custom repository table [SCI-1274] 2017-06-07 15:23:25 +02:00
Zmago Devetak
fcec42ae31 Merge pull request #645 from ZmagoD/zd_SCI_1278 
generates samples csv file in background job [fixes SCI-1278]
 2017-06-07 15:04:24 +02:00
zmagod
c6bb20039b adds drag'n drop feature in task results [fixes SCI-1011], [fixes SCI-1310] and [fixes SCI-285] 2017-06-07 13:29:39 +02:00
ajugo
887d9a4f52 Samples - show all/show assigned [SCI-1277] (#644) 
* Samples - show all/show assigned [SCI-1277]

* Some fixes in code

* Some minor fixes in code

* Omit present

* Correct missed present

* Fixing hound warnings
 2017-06-06 12:46:56 +02:00
Mojca Lorber
acdea2198d code changes after rebasing 2017-06-06 11:10:55 +02:00
Mojca Lorber
13bf4ad229 create new repository 2017-06-06 09:54:39 +02:00
zmagod
67d902db52 refactor 2017-06-05 10:43:58 +02:00
Matej Zrimšek
d8d54232c3 After repository renaming user is redirected to the same repository. Removed the unimplemented repository copy dropdown option. [SCI-1269] 2017-06-02 19:08:51 +02:00
Matej Zrimšek
73aaef0949 Fixe repository rename modal submit button. Consistent variable renaming. [SCI-1269] 2017-06-02 17:52:04 +02:00
Matej Zrimšek
21a72da84f Added rename logic and improved remove logic. [SCI-1269] 2017-06-02 17:50:34 +02:00
Matej Zrimšek
791bb934ca Remove repository modal logic (WIP). [SCI-1269] 2017-06-02 17:50:33 +02:00
Matej Zrimšek
b92a760a5c Added dropdown GUI for editing repository. [SCI-1269] 2017-06-02 17:47:28 +02:00
Luka Murn
fcc3995049 Merge pull request #647 from biosistemika/master 
Bring latest master changes into custom-repositories
 2017-05-30 14:18:14 +02:00
zmagod
b527afd12b generates samples csv file in background job [fixes SCI-1278] 2017-05-29 14:42:55 +02:00
mz3944
689587c4fc Merge pull request #643 from mz3944/mz-SCI-1305 
Handled user removal from the team for user smart annotation [fixes SCI-1305]
 2017-05-29 12:52:19 +02:00
Matej Zrimšek
e8f842c29f Forgot to add the updated locales. [fixes SCI-1305] 2017-05-29 11:39:17 +02:00
Zmago Devetak
2224c6511d Merge pull request #630 from ZmagoD/zd_SCI_1240_v2 
fix label [fixes SCI-1240]
 2017-05-29 09:01:30 +02:00
mlorb
872f712be8 Merge branch 'custom-repositories' into ml_sci_1266_v2 2017-05-23 11:05:25 +02:00
mz3944
6b8c8deb16 Merge pull request #634 from mz3944/mz-SCI-414 
Uncompleted steps not added to Reports
 2017-05-23 09:58:05 +02:00
mz3944
9fe3b717c8 Merge pull request #626 from mz3944/mz-SCI-487 
Simplify "Add contents to report" popup
 2017-05-23 09:57:39 +02:00
Mojca Lorber
9ae615264d add global repositories screen - tab control 2017-05-22 17:54:30 +02:00
Oleksii Kriuchykhin
e99e3edb7b Add repositories dropdown to task navigation [SCI-1273] 2017-05-18 14:21:00 +02:00
Matej Zrimšek
f78c80b148 Added possibility to add uncompleted steps to report. [closes SCI-414] 2017-05-17 13:25:21 +02:00
zmagod
b8b47542a6 fix label [fixes SCI-1240] 2017-05-16 16:08:29 +02:00
zmagod
e0397f8a54 fix search label [fixes SCI-1285] 2017-05-16 14:58:39 +02:00
Matej Zrimšek
dbb79ebab1 Refactoring of specific modals for adding content to report and fixing their inconsistencies. [fixes SCI-487] 2017-05-15 17:43:12 +02:00
Matej Zrimšek
27cfd55ea5 Simplified popup modal for adding contents to report. [fixes SCI-487] 2017-05-15 17:43:12 +02:00
zmagod
01972ab6a7 changes load protocol label [fixes SCI-1240] 2017-05-15 15:22:43 +02:00
Oleksii Kriuchykhin
bb8c7c342c Add additional info to samples info modal [SCI-960] 2017-05-11 22:20:06 +02:00
ajugo
e7c970f287 Wording in activity for completion of checklist item [SCI-274] (#601) 2017-05-10 10:13:59 +02:00
okriuchykhin
ccc640f2bc Merge pull request #593 from okriuchykhin/ok_SCI_1158 
Add advanced search options [SCI-1158]
 2017-05-09 10:23:34 +02:00
gazvoda
596b296c84 Merge pull request #597 from gazvoda/lg-SCI-1104 
Added additional explanation text [fixes SCI-1104]
 2017-05-09 08:41:52 +01:00
gazvoda
e98d6a4da6 Merge pull request #596 from gazvoda/lg-SCI-723 
Added team icon on the first step of tutorial after the Team icon tex…
 2017-05-08 14:57:56 +01:00
osboxes.org
c43eacdb98 Added additional explanation text [fixes SCI-1104] 2017-05-08 15:35:53 +02:00
gazvoda
e462482566 Merge pull request #595 from gazvoda/lg-SCI-1239 
Corrected number of expiration days in message [fixes SCI-1239]
 2017-05-08 13:52:23 +01:00
osboxes.org
ea0934a8cb Added team icon on the first step of tutorial after the Team icon text [solves SCI-723] 2017-05-08 14:43:35 +02:00
osboxes.org
ddbd568166 Corrected number of expiration days in message [fixes SCI-1239] 2017-05-08 13:08:53 +02:00
Zmago Devetak
4b816f5322 Merge pull request #568 from ZmagoD/zd_SCI_1119 
Add images to fields with rich text formatting
 2017-05-08 13:06:58 +02:00
Oleksii Kriuchykhin
0ee7e11620 Add advanced search options [SCI-1158] 2017-05-05 16:41:23 +02:00
Zmago Devetak
de3d1172c1 Merge pull request #584 from ZmagoD/zd_SCI_1200 
add popup for approval to complete the Task [fixes SCI-1200]
 2017-05-05 14:57:27 +02:00
zmagod
b22350136f adds label to step in report [fixes SCI-488] 2017-05-05 09:45:18 +02:00
zmagod
acc5594f1b add popup for approval to complete the Task [fixes SCI-1200] 2017-05-04 12:41:22 +02:00
Matej Zrimšek
8ad52354eb Used locales instead of hardcoded values for intro.js tutorial popup. 2017-04-25 16:03:50 +02:00
zmagod
66f43803c0 refactor, fix user annotation bug 2017-04-24 16:22:25 +02:00
zmagod
550f563666 working version for steps first run 2017-04-21 16:09:04 +02:00
Mojca Lorber
0bae4657f6 add experiment level to user smart annotation notification 2017-04-20 13:21:02 +02:00
mz3944
0ebf294844 Merge pull request #562 from mz3944/mz-SCI-1187 
Added general locale for cases when a name is optional and is not spe…
 2017-04-18 15:26:35 +02:00
mlorb
aab6a9b7a4 Merge pull request #561 from mlorb/ml_sci_1198 
Change mentions for user smart annotations in notifications [SCI-1198]
 2017-04-18 09:42:38 +02:00
mlorb
39f0ec9d24 Merge pull request #557 from mlorb/ml_sci_1118 
Rename cloning text [SCI-1118]
 2017-04-18 09:42:05 +02:00
Matej Zrimšek
c8ba234023 Added general locale for cases when a name is optional and is not specified. [fixes SCI-1187] 2017-04-14 17:20:34 +02:00
Mojca Lorber
34cfe01152 change mentions for user smart annotations in notifications 2017-04-14 16:23:49 +02:00
Mojca Lorber
56efb8086f rename the rest of cloning text 2017-04-13 17:52:32 +02:00
Mojca Lorber
5f02376da3 rename cloning text 2017-04-13 15:09:17 +02:00
zmagod
53e828566a change system notification description 2017-04-13 14:01:52 +02:00
zmagod
f104444a0c adds additional explanations [fixes SCI-1103] 2017-04-12 16:56:47 +02:00
Zmago Devetak
9c31239318 Merge pull request #552 from biosistemika/release-1.9.0 
Release 1.9.1
 2017-04-12 13:08:37 +02:00
zmagod
d2eb7be426 removed faq label 2017-04-10 11:23:50 +02:00
zmagod
90faeec410 fixes typos and protocol step links 2017-04-10 11:21:28 +02:00
zmagod
9610c5f5a0 fix info dropdown links [fixes SCI-1141] 2017-04-07 11:31:09 +02:00
zmagod
439cd0cd89 add notification to experiments 2017-04-06 14:55:18 +02:00
zmagod
046b608018 add notification for my_module/project comments 2017-04-06 14:07:22 +02:00
zmagod
f16607579f refactor steps annotation 2017-04-06 13:03:13 +02:00
zmagod
bb437bd8c5 adds notification to results annotation 2017-04-06 09:33:49 +02:00
zmagod
d331911ffe completed step annotations 2017-04-06 08:42:16 +02:00
zmagod
99c116f257 first run 2017-04-04 09:19:43 +02:00
zmagod
0096f9dc14 refactor 2017-03-29 09:32:23 +02:00
zmagod
0996c14449 Merge branch 'master' of https://github.com/biosistemika/scinote-web into zd_SCI_765 2017-03-27 10:41:58 +02:00
zmagod
2235fd3fb7 adds view if download expires 2017-03-27 10:38:28 +02:00
zmagod
023b3213e8 fixes email link [fixes SCI-765] 2017-03-24 12:10:07 +01:00
zmagod
4385c68f5f adds zip_export utility first run 2017-03-21 16:15:11 +01:00
Oleksii Kriuchykhin
8a8720fcfe Add missing translation for protocol load [SCI-1125] 2017-03-21 15:07:59 +01:00
Oleksii Kriuchykhin
d17eb2b3f7 Add missing translations for samples assign/unassign activities [SCI-1114] 2017-03-17 14:15:50 +01:00
zmagod
0c2523beca Merge branch 'master' of https://github.com/biosistemika/scinote-web into office_integration 2017-03-10 16:21:43 +01:00
Luka Murn
473487faec Add HTML <head><title> to edit, view file pages 
Closes SCI-1049.
 2017-03-06 13:55:07 +01:00
okriuchykhin
75792cde14 Merge pull request #492 from okriuchykhin/ok_SCI_759 
Add more extensive explanation when project name is already taken [SCI-759]
 2017-02-22 16:25:16 +01:00
Oleksii Kriuchykhin
95953e9269 Fix tutorial step 26 wording [SCI-734] 2017-02-22 14:46:38 +01:00
Oleksii Kriuchykhin
35b0b33ddf Add more extensive explanation when project name is already taken [SCI-759] 2017-02-22 14:18:48 +01:00
Mojca Lorber
0fd41e8a6d remove changes on user has no teams view 2017-02-21 15:12:58 +01:00
Mojca Lorber
90864a45a0 fix user has no teams view 2017-02-21 13:08:06 +01:00
okriuchykhin
8e18ff44a6 Merge pull request #479 from okriuchykhin/ok_SCI_999 
Add task complete/uncomplete functionality [SCI-999]
 2017-02-20 15:19:00 +01:00
Luka Murn
d097f0dd15 Merge pull request #477 from Ducz0r/lm-sci-928 
Refactor, merge, unify, improve, update, beautify settings page [SCI-928]
 2017-02-13 16:42:57 +01:00
Oleksii Kriuchykhin
cf8566df33 Add task complete/uncomplete functionality [SCI-999] 2017-02-10 14:27:20 +01:00
Luka Murn
3eb4faa44b Fix task restore action 
Closes SCI-991.
 2017-02-10 14:08:56 +01:00
Luka Murn
f7bd62547e Refactor teams settings into its own controllers 2017-02-09 14:37:59 +01:00
Luka Murn
7bee3a4ea0 Move user profile to settings 2017-02-09 11:34:52 +01:00
Luka Murn
5cb3eb5e09 Refactor preferences -> move them to subcontroller, subroute 2017-02-09 11:07:16 +01:00
Mojca Lorber
d3e0eca44e redesign individual team page 2017-02-01 14:44:47 +01:00
Zmago Devetak
5c9954bb89 Merge pull request #450 from ZmagoD/zd_SCI_939 
Refactor "organizations" to "teams"
 2017-02-01 13:12:02 +01:00
Luka Murn
ec799520d4 Forgot to add en.yml 2017-01-31 16:05:13 +01:00
zmagod
f04a2f663a renamed organizations in config/ 2017-01-25 12:30:11 +01:00
Luka Murn
53699193a2 Merge branch 'smart-annotations' 
Conflicts:
	app/assets/javascripts/comments.js.erb
	app/assets/javascripts/protocols/index.js
	app/assets/javascripts/protocols/steps.js.erb
	app/assets/javascripts/samples/sample_datatable.js.erb
	app/controllers/my_module_comments_controller.rb
	app/controllers/project_comments_controller.rb
	app/controllers/result_comments_controller.rb
	app/controllers/step_comments_controller.rb
	app/datatables/sample_datatable.rb
	app/views/my_module_comments/_comment.html.erb
	app/views/project_comments/_comment.html.erb
	app/views/projects/show/_experiment.html.erb
	app/views/reports/elements/_experiment_element.html.erb
	app/views/reports/elements/_result_comments_element.html.erb
	app/views/reports/elements/_result_text_element.html.erb
	app/views/reports/elements/_step_checklist_element.html.erb
	app/views/reports/elements/_step_comments_element.html.erb
	app/views/reports/elements/_step_element.html.erb
	app/views/result_comments/_comment.html.erb
	app/views/results/_result_text.html.erb
	app/views/step_comments/_comment.html.erb
	app/views/steps/_step.html.erb
	db/schema.rb
 2017-01-24 14:33:23 +01:00
zmagod
6e7fa21dd3 adds smart annotation in task comments, refactor smart_annotation_parser method, fix the user popover description [fixes SCI-924] 2017-01-24 10:51:12 +01:00
Mojca Lorber
6653f0d4c1 small fixes 2017-01-19 16:42:14 +01:00
Oleksii Kriuchykhin
890c5e3c3d Add “no results found” message in smart annotation [SCI-886] 2017-01-19 13:42:58 +01:00
Mojca Lorber
dde9854bf1 update protocol import/export and clone 2017-01-18 14:22:19 +01:00
Mojca Lorber
3b92ab9f36 add names to tables from protocol steps in reports 2017-01-18 14:22:19 +01:00
Mojca Lorber
b3c423c582 add table name in protocol step 2017-01-18 14:22:18 +01:00
zmagod
1b2fa78e42 adds user preview to user smart annotation [fixes SCI-832] 2017-01-13 11:34:10 +01:00
zmagod
a4aa933151 refactor smart annotation parser helper 2017-01-11 10:34:14 +01:00
zmagod
fc76a4ae6d Merge branch 'smart-annotations' of https://github.com/biosistemika/scinote-web into zd_SCI_834 2017-01-10 14:22:04 +01:00
zmagod
94262b56ef prepare data for atwho 2017-01-10 14:14:21 +01:00
Oleksii Kriuchykhin
cba064dfcc Improve error message whan importing CSV files with incorrect character encoding [SCI-815] 2017-01-05 17:00:21 +01:00
Luka Murn
b614ce714b Restyle atwho dropdown 2017-01-05 14:06:48 +01:00
Luka Murn
09ef3b3ad5 Merge pull request #378 from Ducz0r/lm-sci-802-fix 
Add tooltips to samples column dropdown [SCI-802]
 2017-01-04 11:30:04 +01:00
Luka Murn
2c5b27ce81 Change "Update" to "Save" 
Closes SCI-802.
 2017-01-04 11:29:34 +01:00
mlorb
59751ec41e Merge pull request #373 from mlorb/ml_sci_709 
Add Protocol Preview to Protocol repository [SCI-709]
 2017-01-04 11:28:55 +01:00
Luka Murn
37cd6417c8 Merge pull request #374 from Ducz0r/lm-sci-808-814-fix 
Fix some bugs on sample groups & types page [SCI-808, SCI-814]
 2017-01-04 09:50:26 +01:00
zmagod
a434649f42 Merge branch 'master' of https://github.com/biosistemika/scinote-web into office_integration 2017-01-03 16:35:25 +01:00
Oleksii Kriuchykhin
d898f8993f Add description to Clone actions [SCI-766] 2016-12-29 15:33:49 +01:00
Luka Murn
2304742d87 Add tooltips to samples column dropdown 
Closes SCI-802.
 2016-12-27 08:45:23 +01:00
Luka Murn
3922be2b17 Change String in sample types & groups 
Closes SCI-808.
 2016-12-23 11:48:57 +01:00
Mojca Lorber
40e3240a99 add content to preview modal 2016-12-22 11:43:11 +01:00
Zmago Devetak
c8631077df Merge pull request #361 from biosistemika/improved-sample-table 
Improved sample table
 2016-12-16 15:37:54 +01:00
Mojca Lorber
2cfcba0ceb add protocol preview modal 2016-12-13 10:39:18 +01:00
Zmago Devetak
d54007f69c Merge pull request #337 from ZmagoD/zd_SCI_740 
limits max size of all uploaded files at the one time
 2016-12-13 09:04:14 +01:00
zmagod
8dd8a7e7cd Merge branch 'improved-sample-table' of https://github.com/biosistemika/scinote-web into zd_improved_samples_table_SCI_774_775_778_777 2016-12-12 15:52:25 +01:00
zmagod
5176f8b459 clean unneeded code [fixes SCI-778] refactor js 2016-12-12 15:40:13 +01:00
zmagod
d9025a9601 changes create/edit mode buttons [fixes SCI-777] 2016-12-12 14:42:06 +01:00
Luka Murn
d30a9780f4 Merge branch 'lm-sci-711-fix' of https://github.com/Ducz0r/scinote-web into Ducz0r-lm-sci-711-fix 
Conflicts:
	app/assets/javascripts/samples/sample_datatable.js
 2016-12-12 09:57:37 +01:00
Luka Murn
1a8b141b95 Add delete custom field functionality 2016-12-09 13:49:19 +01:00
Matej Zrimšek
aea679ec11 Added links for creating new sample type and group when creating new sample. [fixes SCI-701] 2016-12-09 11:39:12 +01:00
zmagod
9f1e436623 limits max size of all uploaded files at the one time [fixes SCI-740] 2016-12-07 09:02:04 +01:00