Commit graph

2337 commits

Author SHA1 Message Date
Anton 7bc5c622a7 Add comments to step [SCI-6837] 2022-05-25 15:06:12 +02:00
ajugo bacb1547f2
Changed clone permissions and UI changes for experiment actions [SCI-6756] (#4074) 2022-05-25 10:22:50 +02:00
artoscinote 6c797f5825
Integrate WOPI file modal with new steps [SCI-6830] (#4111) 2022-05-24 11:13:47 +02:00
Anton a494051f61 Add placeholder for new files in step [SCI-6833] 2022-05-23 13:44:34 +02:00
Anton 5a275aaeae Move attachments to separate component 2022-05-19 11:16:50 +02:00
ajugo 90db2bace9
API endpoint to generate with ELN data for Validaide [SCI-6663][SCI-6798] (#4012)
* Manuscript JSON data SCI-6663

* Clean code for generate manuscript data [SCI-6663]

* Include project data into json [SCI-6663]

* Fix hound [SCI-6663]

* Fix hound [SCI-6663]

* Remove manuscript naming [SCI-6663]

* Add local storage assets capabilites [SCI-6663]

* Rename project [SCI-6663]

* Enable multple projects and clean input [SCI-6798]

* Fix hound [SCI-6798]
2022-05-19 09:08:05 +02:00
Anton 9cd0e010a6 Add file upload logic [SCI-6829] 2022-05-19 08:54:22 +02:00
Anton 134558355d Add file modal [SCI-6828] 2022-05-18 11:12:53 +02:00
ajugo e8d7fa50b8
Enable smart annotation notifcation at consumption and some rewording [SCI-6802] (#4094) 2022-05-17 11:41:53 +02:00
Anton 940b0ea744 Add general layout for step attachments [SCI-6811] 2022-05-12 12:26:50 +02:00
artoscinote b486f3fd31
Implement checklists [SCI-6789] (#4089) 2022-05-11 15:51:26 +02:00
Anton 24d68da455 Fix tinymce assets for steps [SCI-6809] 2022-05-11 13:01:23 +02:00
Anton c0660d0243 Small fixes [SCI-6808] 2022-05-11 11:32:27 +02:00
Anton 04e16cf6b5 Add text component [SCI-6808] 2022-05-11 09:51:47 +02:00
aignatov-bio d07daa73cb
Merge pull request #4072 from aignatov-bio/ai-sci-6781-add-confirmation-modal-for-step-deletion
Add delete step modal [SCI-6781]
2022-05-10 13:28:47 +02:00
Oleksii Kriuchykhin e957d7d35e Improve loading time of canvas view/edit [SCI-6797] 2022-05-09 11:40:31 +02:00
Anton 252680f0a1 Add table component [SCI-6777] 2022-05-06 12:09:54 +02:00
artoscinote b00968fd55
Implement basic checklist functionality [SCI-6786] (#4073)
* Implement protocol status bar functionality [SCI-6760]

* Inline edit interactions, checklist name edit improvements [SCI-6786]
2022-05-05 12:56:31 +02:00
Anton 277e202c90 Add delete step modal [SCI-6781] 2022-05-04 15:57:13 +02:00
artoscinote 5454aa26bc
Implement protocol status bar functionality [SCI-6760] (#4070) 2022-05-04 11:49:57 +02:00
Anton 3b60c62c79 Refactor modal loading [SCI-6780] 2022-05-04 10:36:13 +02:00
Anton e06b398bb4 Add delete action for step components [SCI-6780] 2022-05-03 15:21:47 +02:00
artoscinote 6352a4dd04
Implement protocol options dropdown [SCI-6750, SCI-6751] (#4066)
* Implement protocol options dropdown [SCI-6750, SCI-6751]

* Implement simple API error handling for step status update [SCI-6354]
2022-05-03 15:18:48 +02:00
Anton 6a827022f6 Add insert step element dropdown [SCI-6758] 2022-05-03 13:22:26 +02:00
artoscinote ac45edb14c
Added validations for date(time) column reminder [SCI-6775] (#4063) 2022-04-28 15:30:20 +02:00
Anton 98efcc04b5 Small CSS fixes for repository [SCI-6767] 2022-04-28 14:32:34 +02:00
artoscinote 8aaab73856
Add inline edit component, protocol name updates [SCI-6749] (#4057) 2022-04-26 14:13:17 +02:00
aignatov-bio 3d78559559
Merge pull request #4047 from aignatov-bio/ai-sci-6754-add-creation-step-functionality
Add step creation/deletion functionality [SCI-6754]
2022-04-25 12:46:33 +02:00
aignatov-bio 957e79f46a
Merge pull request #4051 from aignatov-bio/ai-sci-6743-add-newgative-validation-for-treshold
Add negative validation for threshold [SCI-6743]
2022-04-25 12:46:20 +02:00
Anton ba3c73439a Add step creation/deletion functionality [SCI-6754] 2022-04-25 12:40:14 +02:00
artoscinote e4b5389acf
Copy fix [SCI-6762] (#4048) 2022-04-25 12:18:50 +02:00
Anton b56f11fc18 Add negative validation for treshold [SCI-6743] 2022-04-25 12:18:22 +02:00
Alex Kriuchykhin e15a382e37
Merge pull request #4032 from okriuchykhin/ok_SCI_6712
Add models for step orderable elements, migrate step descriptions [SCI-6712]
2022-04-22 09:33:41 +02:00
artoscinote 6ef190f353
Basic Vue setup for protocols [SCI-6749] (#4044) 2022-04-21 15:12:34 +02:00
Anton fd736f99c1 Add comment to repository stock activities [SCI-6746] 2022-04-20 11:29:16 +02:00
ajugo 54474b2bba
API GET repository stock column output fix [SCI-6550] (#4030)
* Add include stock unit items to Stock column get [SCI-6550]

* Fix stock column test [SCI-6550]

* Fix hound [SCI-6550]
2022-04-19 16:05:17 +02:00
Oleksii Kriuchykhin 5a17ad6be9 Add models for step orderable elements, migrate step descriptions [SCI-6712] 2022-04-19 13:26:13 +02:00
Anton 2481ba566a Add edit title for stock consumption modal [SCI-6731] 2022-04-15 11:47:49 +02:00
aignatov-bio 4a232ac391
Merge pull request #4020 from biosistemika/features/projects-experiments-pagination
Features/projects experiments pagination
2022-04-14 10:45:27 +02:00
Anton d091c56e9f Add pagination for experiments [SCI-6656] 2022-04-12 15:16:02 +02:00
artoscinote 83ac50c57d
Add repository snapshot error modal [SCI-6613] (#3993) 2022-04-12 13:29:11 +02:00
artoscinote 2d811cdc4c
Add snapshot error message below task status [SCI-6614] (#4009) 2022-04-12 13:28:26 +02:00
ajugo 0a5e93a018
API: add endpoint for creating stock column [SCI-6550] (#3956)
* Add test for repositoty stock column api [SCI-6550]

* Create and update stock column [SCI-6550]

* Change stock unit [SCI-6550]

* Fix hound [SCI-6550]

* Fix on delete [SCI-6550]

* Fix houd [SCI-6550]
2022-04-08 14:09:00 +02:00
aignatov-bio 3a4cab9d0a
Stock modal UX fixes [SCI-6714] (#3998)
Co-authored-by: Anton <anton@scinote.net>
2022-04-08 11:09:37 +02:00
artoscinote 5effe34221
Add reminder preset to date(time) reminders [SCI-6693] (#3996) 2022-04-07 12:27:21 +02:00
Anton d96103d714 Add pagination to projects list [SCI-6655] 2022-04-07 12:22:52 +02:00
artoscinote 73757c4820
Added styling for failed snapshots in sidebar [SCI-6636] (#3990)
* Added styling for failed snapshots in sidebar [SCI-6636]

* Simplify markup for failed icon [SCI-6636]
2022-04-05 15:45:49 +02:00
artoscinote 785ff4152e
Stock column management UX/UI fixes [SCI-6674] (#3979) 2022-04-05 10:30:06 +02:00
artoscinote 8d25f456d1
Add basic validation to reminder value to prevent integer overflow errors [SCI-6693] (#3986) 2022-04-04 12:09:41 +02:00
ajugo bb44152d54
Fix assigning and consuming items [SCI-6686] (#3985) 2022-04-04 11:07:46 +02:00
artoscinote 401a32edd9
Implement failed snapshot pop-up on task screen [SCI-6612] (#3950)
* Implement failed snapshot pop-up on task screen [SCI-6612]

* Copy change [SCI-6612]

* Proper handling of snapshot transition error [SCI-6612]

* Move modal auto open logic to JS file [SCI-6612]

* Remove unnecessary .html_safe [SCI-6612]
2022-04-04 11:04:03 +02:00
aignatov-bio b6e34266f9
Update repository card view for stock [SCI-6685] (#3982)
Co-authored-by: Anton <anton@scinote.net>
2022-04-01 13:59:44 +02:00
aignatov-bio a32dd54a6e
Toolbar fixes [SCI-6670] (#3973)
Co-authored-by: Anton <anton@scinote.net>
2022-03-31 14:04:00 +02:00
artoscinote 229a27750f
Implement stock consumption via the API [SCI-6642] (#3964)
* Implement stock consumption via the API [SCI-6642]

* Remove unnecessary attribute from InventoryItemSerializer [SCI-6642]

* Amend permission check, add nested transaction support to consume_stock method [SCI-6642]
2022-03-30 14:33:26 +02:00
aignatov-bio ca53c3058a
Stock modal bugs [SCI-6667] (#3970)
Co-authored-by: Anton <anton@scinote.net>
2022-03-30 14:03:07 +02:00
Martin Artnik 45a325e824 Merge branch 'develop' into features/stock-management 2022-03-30 11:10:40 +02:00
ajugo 5cc97122e5
Viewer role does not see any tasks in archived project [SCI-6616] (#3958)
* Fix viewer role not see any tasks in archived project [SCI-6616]

* Fix rollback for add read archive permission migration [SCI-6616]
2022-03-30 11:01:26 +02:00
artoscinote 36fbfcab2f
Implement hide all repository reminders button [SCI-6505] (#3940) 2022-03-30 10:54:55 +02:00
aignatov-bio 103e20ee9a
Update front end validation for columns managment [SCI-6657] (#3962)
Co-authored-by: Anton <anton@scinote.net>
2022-03-28 21:31:49 +02:00
aignatov-bio 673f8c1a2a
Fix multiple stock bugs [SCI-6651] (#3959)
Co-authored-by: Anton <anton@scinote.net>
2022-03-28 12:43:09 +02:00
aignatov-bio 004aeda601
Add stock filters [SCI-6547] (#3938)
Co-authored-by: Anton <anton@scinote.net>
2022-03-23 10:05:07 +01:00
ajugo 7cba738a9b
Date remidner flyout [SCI-6503] (#3937)
* Implement date reminder flyout [SCI-6503]

* Show only days left for date reminder [SCI-6503]

* Pluralize day in reminders [SCI-6503]

* Create partials for different reminders [SCI-6503]

* Unify css for reminder [SCI-6503]
2022-03-22 13:33:58 +01:00
Alex Kriuchykhin 91c97f1dea
Change env variable name for s3 bucket region [SCI-6603] (#3944) 2022-03-18 15:05:55 +01:00
artoscinote 297cd02da7
Handle locked stock consumption state [SCI-6608] (#3942) 2022-03-18 15:02:15 +01:00
aignatov-bio 0cfedb2155
Add datetime reminders to columns modal [SCI-6556] (#3934)
Co-authored-by: Anton <anton@scinote.net>
2022-03-18 14:40:09 +01:00
aignatov-bio fecaafecf9
Refactor repository toolbar [SCI-6545] (#3943)
Co-authored-by: Anton <anton@scinote.net>
2022-03-18 14:10:34 +01:00
ajugo d1610fba53
Low stock flyout reminders [SCI-6502] (#3932)
* Display low stock flyout reminder [SCI-6502]

* Display low stock flyout reminder [SCI-6502]

* Adapt showing stock reminders for every bell icon click [SCI-6502]

* Correct hound error [SCI-6502]

* Fix event registration for fetching reminder data [SCI-6502]

* Fix event registration for fetching reminder data [SCI-6502]

* Fix hound [SCI-6502]

* Remove not needed line [SCI-6502]

* Add reminder template [SCI-6502]

* Add clearing messages [SCI-6502]
2022-03-15 10:24:35 +01:00
Anton 8b8e2c6d92 Merge branch 'develop' into features/stock-management 2022-03-14 11:56:38 +01:00
artoscinote 35dfa15e57
Implement hidden repository cell reminders [SCI-6504] (#3933) 2022-03-11 12:38:45 +01:00
ajugo 959b86b40c
Task inventory activity for assigned item consumption [SCI-6453] (#3830)
* Add task inventory activity [SCI-6453]
2022-03-09 18:43:38 +01:00
aignatov-bio 10743921d4
Add reminders to stock modal [SCI-6557] (#3917)
Co-authored-by: Anton <anton@scinote.net>
2022-03-09 14:19:15 +01:00
artoscinote d577fcc824
Implement basic logic for Date/DateTime/Stock reminders [SCI-6554] (#3911)
* Implement basic logic for Date/DateTime/Stock reminders [SCI-6554]

* Implement bell icon [SCI-6500]

* Refactor reminder cells scope [SCI-6554]
2022-03-09 14:13:48 +01:00
artoscinote f9a8358d72
Fix archived column hiding issue in snapshots, fix typos [SCI-6589] (#3915) 2022-03-03 13:52:56 +01:00
Alex Kriuchykhin bd47893947
Add inventory archiving to the API [SCI-5584] (#3885) 2022-02-28 10:33:43 +01:00
Alex Kriuchykhin dd5939e89d
Fix advanced filters for ID and Name columns [SCI-6496] (#3865) 2022-02-22 14:49:17 +01:00
aignatov-bio 10821edbba
Update datetime filters operators [SCI-6544] (#3873)
Co-authored-by: Anton <anton@scinote.net>
2022-02-18 11:16:53 +01:00
Alex Kriuchykhin c39c767241
Update message for empty result for archived items [SCI-6532] (#3867) 2022-02-17 15:26:09 +01:00
aignatov-bio 6cee35dfa5
Small ux fixes [SCI-6539][SCI-6516] (#3864)
Co-authored-by: Anton <anton@scinote.net>
2022-02-16 12:56:54 +01:00
aignatov-bio f2e4c579af
Multiple UX fixes for filters [SCI-6525] (#3858)
Co-authored-by: Anton <anton@scinote.net>
2022-02-15 15:03:25 +01:00
Alex Kriuchykhin 0ce6f43cbf
Fix inventory table custom error messages [SCI-6532] (#3855) 2022-02-15 14:37:26 +01:00
aignatov-bio afce0e34c4
Fix css for saved filters dropdown [SCI-6516] (#3843)
Co-authored-by: Anton <anton@scinote.net>
2022-02-11 12:44:22 +01:00
Alex Kriuchykhin ed8ba13525
Fix advanced search for file type columns [SCI-6518] (#3839) 2022-02-11 10:47:32 +01:00
artoscinote bc5822de7b
Added error messges for missing search columns/values [SCI-6483] (#3824)
* Added error messges for missing search columns/values [SCI-6483]
2022-02-11 10:24:29 +01:00
aignatov-bio e59b18e25d
Add default selection for filters [SCI-6484] (#3826)
Co-authored-by: Anton <anton@scinote.net>
2022-02-10 20:58:44 +01:00
aignatov-bio 8604319c1b
Add front-end validation for comments field [SCI-6464] (#3829)
Co-authored-by: Anton <anton@scinote.net>
2022-02-10 10:55:58 +01:00
Alex Kriuchykhin 4627d15fc3
Implement import for repository stock values [SCI-6461] (#3818) 2022-02-04 10:29:48 +01:00
artoscinote f1e04cc604
Fix appearance of members pagination, copy fix [SCI-6265] (#3792) 2022-02-02 10:41:29 +01:00
artoscinote cdbf1f5fa0
Implement stock management activities [SCI-6452] (#3810)
* Implement stock management activities [SCI-6452]

* PR code fixes [SCI-6452]
2022-02-02 10:33:02 +01:00
Alex Kriuchykhin 3c165996fa
Fix table names in advanced filters configuration [SCI-6467] (#3814) 2022-02-02 10:26:43 +01:00
aignatov-bio 0d6b2ad4b4
Add searchable list for advanced filters [SCI-6466] (#3808)
Co-authored-by: Anton <anton@scinote.net>
2022-02-01 14:39:04 +01:00
Alex Kriuchykhin c1972e4fb2
Fix advanced filtering with multiple filters [SCI-6471] (#3807) 2022-01-31 11:10:39 +01:00
aignatov-bio c8784d1f66
Add advanced filters for date/datetime/time range [SCI-6462] (#3806)
Co-authored-by: Anton <anton@scinote.net>
2022-01-31 09:21:08 +01:00
Oleksii Kriuchykhin dd5f8c2793 Add stock management columns to snapshots [SCI-6448] 2022-01-28 13:19:37 +01:00
aignatov-bio 2c88843924
Task stock consumption modal[SCI-6444][SCI-6445] (#3798)
Add main logic for consumption on task [SCI-6444]

Co-authored-by: Anton <anton@scinote.net>
2022-01-28 11:10:56 +01:00
artoscinote d779f352a7
Merge pull request #3796 from biosistemika/features/repository-filters
Features/repository filters
2022-01-26 10:36:30 +01:00
aignatov-bio 371d5f0636
Add current/new amount section to stock [SCI-6416] (#3791)
Co-authored-by: Anton <anton@scinote.net>
2022-01-26 10:28:43 +01:00
Alex Kriuchykhin e55c9ec1cc
Merge pull request #3785 from okriuchykhin/ok_SCI_6423
Fix filtering for repository snapshots [SCI-6423]
2022-01-25 12:59:46 +01:00
artoscinote 42a537390e
Group public users in experiments and tasks [SCI-6332] (#3769)
* Group public users in experiments and tasks [SCI-6332]

* Add list of users to the public users group elements [SCI-6404]
2022-01-25 12:41:36 +01:00
artoscinote 4ede001cf1
Added UPDATE_STOCK_CONSUMPTION to MyModule permissons [SCI-6418] (#3781)
* Fix invalid return in reports jobs [SCI-6409] (#3777)

* Added UPDATE_STOCK_CONSUMPTION to MyModule permissons [SCI-6418]
2022-01-25 12:41:16 +01:00
artoscinote 790451c96f
Various fixes for BMT search [SCI-6077] (#3673)
* Various fixes for BMT search [SCI-6077]

* Add vue linter support [SCI-6077]
2022-01-25 12:28:38 +01:00