Commit graph

2830 commits

Author SHA1 Message Date
mlorb
34f5c2c7ac fix validation in asset model and change formatted method in repository_asset_value model 2018-03-12 10:50:45 +01:00
Oleksii Kriuchykhin
ac009a29cb Add annotations migrations and optimize queries [SCI-2016] 2018-03-11 22:06:44 +01:00
Zmago Devetak
d50bc5fde9
Merge pull request #998 from ZmagoD/zd_SCI_2014
migration script for migrating samples -> custom repositories [SCI-2014]
2018-03-09 17:19:12 +01:00
okriuchykhin
e0834a57cf
Merge pull request #1027 from okriuchykhin/ok_SCI_2163
Hide delete button for guest users in repository [SCI-2163]
2018-03-09 17:16:58 +01:00
mlorb
64e26e1c60 add file custom column type to db 2018-03-09 17:04:54 +01:00
okriuchykhin
707d2a048f
Merge pull request #1024 from okriuchykhin/ok_SCI_2145
Fix sample record creation [SCI-2145]
2018-03-09 16:52:38 +01:00
okriuchykhin
7cbfa5936a
Merge pull request #1026 from okriuchykhin/ok_SCI_2148
Add uniqueness validation for SamplesTable [SCI-2148][SCI-2149]
2018-03-09 16:42:33 +01:00
Oleksii Kriuchykhin
853e1f7657 Fix nil case [SCI-2145] 2018-03-09 16:41:23 +01:00
Oleksii Kriuchykhin
cd9260f439 Hide delete button for guest users in repository [SCI-2163] 2018-03-09 16:19:36 +01:00
zmagod
22eb4121f0 follow @okriuchykhin 's suggestions 2018-03-09 15:44:42 +01:00
Oleksii Kriuchykhin
e4d974aa58 Add uniqueness validation for SamplesTable [SCI-2148][SCI-2149] 2018-03-09 15:34:06 +01:00
zmagod
0baa7a1f99 fix hound 2018-03-09 14:43:12 +01:00
zmagod
4f951f6679 adds unit specs for datatable service [fixes SCI-2068] 2018-03-09 14:22:00 +01:00
Oleksii Kriuchykhin
940469e41b Fix user management on project [SCI-2146] 2018-03-09 12:08:34 +01:00
Oleksii Kriuchykhin
804d313f90 Fix sample record creation [SCI-2145] 2018-03-09 11:52:28 +01:00
Oleksii Kriuchykhin
1765d83cd1 Refactor search to support repository list items [SCI-2108] 2018-03-09 11:05:43 +01:00
okriuchykhin
160935cde0
Merge pull request #1022 from okriuchykhin/ok_SCI_2136
Fix manage repository permissions [SCI-2136]
2018-03-09 10:15:24 +01:00
okriuchykhin
d0d5481a29
Merge pull request #1021 from okriuchykhin/ok_SCI_2131
Fix notification for user removal from a team [SCI-2131]
2018-03-09 10:15:09 +01:00
zmagod
26883af386 fix assigned ordering 2018-03-08 17:36:10 +01:00
okriuchykhin
a306e65093
Merge pull request #1016 from okriuchykhin/ok_SCI_2130
Fix edit project's users modal [SCI-2130]
2018-03-07 14:04:26 +01:00
Oleksii Kriuchykhin
bd9f5c1cda Fix manage repository permissions [SCI-2136] 2018-03-07 13:41:57 +01:00
Oleksii Kriuchykhin
1082f7f93c Fix notification for user removal from a team [SCI-2131] 2018-03-07 13:20:17 +01:00
okriuchykhin
cae726f5c3
Merge pull request #1020 from okriuchykhin/ok_SCI_2055
Fix invite users link on task card [SCI-2055]
2018-03-07 09:41:23 +01:00
okriuchykhin
c0cfa6e7fe
Merge pull request #1019 from okriuchykhin/ok_SCI_2134
Remove extra permission checks from WOPI buttons [SCI-2134][SCI-2133]
2018-03-06 18:10:05 +01:00
Oleksii Kriuchykhin
186780e68f Fix invite users link on task card [SCI-2055] 2018-03-06 17:56:01 +01:00
Oleksii Kriuchykhin
156a639e4c Remove extra permission checks from WOPI buttons [SCI-2134][SCI-2133] 2018-03-06 17:36:40 +01:00
Oleksii Kriuchykhin
b5eb821cfa Fix sample's custom column permissions [SCI-2135] 2018-03-06 16:40:25 +01:00
zmagod
fb66131e29 setup endpoint for repository_rows paging/search 2018-03-06 16:32:39 +01:00
Oleksii Kriuchykhin
ca66858063 Fix edit project's users modal [SCI-2130] 2018-03-06 15:49:30 +01:00
mz3944
bb21f6543c
Merge pull request #1004 from mz3944/mz-SCI-2011
Wrapping up the permissions [SCI-2011]
2018-03-06 07:10:40 +01:00
Matej Zrimšek
c5b0a6525b Some additional permission calls fixes, minor refactoring. 2018-03-06 06:56:35 +01:00
Zanz2
8f5dd3df38
Merge pull request #1003 from Zanz2/table_missing_scrollbar_sci1818
Table missing scrollbar [SCI-1818]
2018-03-05 17:13:06 +01:00
Zanz2
1e6f1acef5 fixed according to pr 2018-03-05 17:02:37 +01:00
Zanz2
451d14c2e9 Added 4 to constants too, then fixed line too long error 2018-03-05 16:48:18 +01:00
Zanz2
c5728c4018
Merge branch 'master' into null_step_crash_sci2043 2018-03-05 16:37:24 +01:00
Zanz2
e3e7514049 removed redundant return 2018-03-05 16:15:33 +01:00
Zanz2
554b31e0aa Added constants 2018-03-05 16:09:06 +01:00
Zanz2
bd19c89212
Merge pull request #1013 from Zanz2/step_reorder_fix
quick fix for if previous guid is unknown format [Protocols.io import]
2018-03-05 15:59:46 +01:00
zmagod
fca01bd54f refactor repository export [fixes SCI-2025] 2018-03-05 15:54:04 +01:00
mlorb
5e44859ce0
Merge pull request #1010 from mlorb/ml-sci-1826
Sign up with linkedIn account [SCI-1826]
2018-03-05 13:24:36 +01:00
mlorb
a19b672a83
change validation again 2018-03-05 13:12:44 +01:00
Zmago Devetak
50ccec5007
Merge pull request #1009 from ZmagoD/zd_SCI_2066
add info modal for repository items [fixes SCI-2066]
2018-03-05 12:49:29 +01:00
Matej Zrimšek
61d1f5374d Additionaly removed some unneeded code, related to the previous commit. 2018-03-04 15:24:43 +01:00
Matej Zrimšek
fa7710fb80 Forgot to remove unneeded code form permissions after the previous refactoring. 2018-03-04 15:17:46 +01:00
Matej Zrimšek
53f75f3cd6 Minor permissions and their calls refactoring and fixing. 2018-03-04 14:49:41 +01:00
Matej Zrimšek
5724f8ed4d Minor permissions refactoring, including putting the same checks for multiple permissions before the specific ones, hence preventing further evaluation if those permissions are not met. 2018-03-04 14:19:17 +01:00
mz3944
c04a153652
Merge pull request #1005 from mz3944/mz-SCI-2064
At adding file to task, cancel button does not respond [SCI-2064]
2018-03-04 13:34:50 +01:00
Zanz2
ba67446eee quick fix for if previous guid is unknown format 2018-03-03 22:26:00 +01:00
Zanz2
5bcda7f6de fixed pr 2018-03-02 23:02:35 +01:00
Zanz2
350f12bdbc using dig method now 2018-03-02 22:29:51 +01:00
mlorb
d19ca7fbdc
change validation 2018-03-02 16:32:46 +01:00
zmagod
4642d049fa fix hound 2018-03-02 14:16:31 +01:00
zmagod
2b55cd7090 rename variables 2018-03-02 14:14:27 +01:00
zmagod
0996745781 refactor repository import, adds RepositoryListType as an option and makes the import class more extensible [fixes SCI-2024] 2018-03-02 13:39:22 +01:00
mlorb
f5949e9d10 refactor 2018-03-01 17:52:24 +01:00
Luka Murn
070450f813 Merge branch 'release-1.12.11'
Conflicts:
	config/initializers/extends.rb
2018-03-01 14:04:57 +01:00
zmagod
83ba412c48 remove unneeded comment 2018-03-01 11:51:39 +01:00
mlorb
08439e7f58 sign up with linkedIn account 2018-02-28 18:12:21 +01:00
zmagod
29a1073a50 refactor queries 2018-02-27 16:34:51 +01:00
zmagod
e3ca782996 add info modal for repository items [fixes SCI-2066] 2018-02-27 16:21:46 +01:00
zmagod
6908368506 refactor 2018-02-27 10:43:57 +01:00
zmagod
3aa28f6d11 assign repository row to task 2018-02-27 10:40:52 +01:00
zmagod
83db7ed01d adds rake task to migrate the samples in custom repositories and tests [fixes SCI-2014] 2018-02-26 17:21:58 +01:00
Oleksii Kriuchykhin
aa933ad1f4 Add extendable file types mappings for icons [PIP-46] 2018-02-26 14:23:02 +01:00
Matej Zrimšek
96a6779d55 Fixed misspelled permission call. 2018-02-22 14:08:12 +01:00
Matej Zrimšek
ff9dff5c10 Fixed reports permissions check calls. Fixed Hound warnings. 2018-02-22 13:51:22 +01:00
Matej Zrimšek
1904099954 Put permissions helper methods inside utility module. 2018-02-21 20:22:13 +01:00
Zanz2
29aea1ebd2 refactored according to PR 2018-02-21 16:17:53 +01:00
mlorb
4d69636dbe
Merge pull request #1002 from mlorb/ml-sci-2031_v2
Fix bug with load older activities button not working [SCI-2031]
2018-02-20 13:19:20 +01:00
Zanz2
9c2a2956e3 Merge branch 'table_missing_scrollbar_sci1818' of github.com:Zanz2/scinote-web into table_missing_scrollbar_sci1818
Merging Biosis master with branch that resizes small tables to atleast 5x5
2018-02-19 17:40:13 +01:00
Matej Zrimšek
b8b9707c06 Fixed protocol and archive permission calls, fixed result permissions; module group managing is now also allowed on newly created groups; other permission call fixes and some refactoring. 2018-02-19 14:51:14 +01:00
mlorb
d2dcb765b4 fix bug with load older activities button not working 2018-02-16 15:42:10 +01:00
Zanz2
5c93bd9676 Tables now have fixed 200 px height, which solves various issues and the scrollbar clipping to the bottom 2018-02-16 14:14:51 +01:00
Zanz2
673901fb01
Merge pull request #984 from Zanz2/yellow_flashv3_SCI1834
Fixed tables getting cut when certain attributes are at max length [SCI-1834]
2018-02-16 12:52:51 +01:00
Matej Zrimšek
7b07e7b347 Fixed protocol in repository permissions, and refactored it a bit. 2018-02-16 12:04:11 +01:00
Matej Zrimšek
6ba226d514 Added missing '?' to the canaid permission calls that were missing it. 2018-02-16 11:12:30 +01:00
Matej Zrimšek
5bda53eebf Overall refactoring of all canaid permissions and code related to their calls. 2018-02-16 10:54:06 +01:00
Matej Zrimšek
4fe669ca9a Removed permissions helper and updated the remaining calls to its methods with the new canaid gem permissions. 2018-02-16 10:53:22 +01:00
Zanz2
b9db39f87d removing last commit 2018-02-16 00:00:53 +01:00
Zanz2
fab9180b7b fixed small oversight 2018-02-15 23:40:09 +01:00
Zanz2
c963c948a1 Fixed main issue, bad step structure now gets fixed to empty template 2018-02-15 23:28:20 +01:00
Zanz2
95501eb046 saving work for later 2018-02-15 20:01:36 +01:00
zmagod
5922aa21a8 adds fetch_all_team_samples method/spec 2018-02-15 17:38:45 +01:00
zmagod
c53df21946 adds specs for sample_to_repository migration service 2018-02-15 16:56:38 +01:00
Zanz2
ad8f93b57f
Merge pull request #991 from Zanz2/missplaced_authors_sci1808
protocols io authors are now real authors, not user that added the protocol [SCI-1808]
2018-02-15 16:53:39 +01:00
mlorb
9797712561
Merge pull request #997 from mlorb/ml-sci-2045
Fix bug with user getting the notification at completing the step, when notifications are switched off [SCI-2045]
2018-02-15 14:51:40 +01:00
Zmago Devetak
e0510ab448
Merge pull request #995 from ZmagoD/zd_SCI_2040
fixed bug with assigned repository items [fixes SCI-2040]
2018-02-15 13:05:30 +01:00
Zmago Devetak
0583979cf9
Merge pull request #993 from ZmagoD/zd_SCI_2039
fixes errors with form id duplicates [fixes SCI-2039]
2018-02-15 11:10:43 +01:00
zmagod
78e902f316 fixes few Hound alerts 2018-02-15 11:06:59 +01:00
zmagod
e0ac8e8f91 extract helper methods in service 2018-02-15 09:36:09 +01:00
Matej Zrimšek
ac5b65b121 Added some additional comments for checking if project is active in permissions. 2018-02-14 14:39:10 +01:00
Matej Zrimšek
09c5e23adf Fixed permission checks for completing step and checking step checkboxes. Disabled turbolinks for comments since it can cause issues. Minor code styling changes. 2018-02-14 14:39:10 +01:00
Matej Zrimšek
d571ab2ed8 Fixed comments permissions for experiment level. 2018-02-14 14:39:10 +01:00
Matej Zrimšek
6b1fee4d30 Added/joined repository record assignment to task with sample assignmment to task. 2018-02-14 14:39:10 +01:00
Matej Zrimšek
f21c794a95 Fixed permission error when accessing samples page. 2018-02-14 14:39:09 +01:00
Matej Zrimšek
4c87fb4a55 Fixed permission error when restoring task. 2018-02-14 14:39:09 +01:00
Matej Zrimšek
946f516171 Fixed permission error when moving a freshly cloned task. 2018-02-14 14:39:09 +01:00
Matej Zrimšek
68206cb591 Added missing checks for whether task/experiment/project is active for experiment level permissions. Minor code refactoring and restyling. 2018-02-14 14:39:08 +01:00
Matej Zrimšek
d55734e501 Added additional permission checks for moving tasks. Added forgotten enclosing tag in a view. 2018-02-14 14:39:07 +01:00
Matej Zrimšek
d7108f5a35 Fixed Hound warnings. 2018-02-14 14:39:07 +01:00