115 commits

Author	SHA1	Message	Date
Luka Murn	cb6fe50832	Merge branch 'master' into ux-release-1 ... Conflicts: app/assets/javascripts/repositories/index.js	2018-04-26 11:38:54 +02:00
zmagod	199a2a23bf	fixes per @mlorb 's request	2018-04-23 12:26:21 +02:00
zmagod	9d282d1800	adds new reports index page [fixes SCI-2124]	2018-04-18 16:47:52 +02:00
Oleksii Kriuchykhin	d8d2d75631	Fix repository rows permissions [SCI-2265]	2018-04-02 20:48:44 +02:00
zmagod	659a088058	refactor smart annotation parser, adds repository item to smart annotation parser [fixes SCI-2222]	2018-03-29 15:55:26 +02:00
Oleksii Kriuchykhin	aa69624f9f	Fix sample assign permissions [SCI-2249]	2018-03-25 20:10:32 +02:00
Oleksii Kriuchykhin	cd9260f439	Hide delete button for guest users in repository [SCI-2163]	2018-03-09 16:19:36 +01:00
Oleksii Kriuchykhin	bd9f5c1cda	Fix manage repository permissions [SCI-2136]	2018-03-07 13:41:57 +01:00
Oleksii Kriuchykhin	b5eb821cfa	Fix sample's custom column permissions [SCI-2135]	2018-03-06 16:40:25 +01:00
Matej Zrimšek	fa7710fb80	Forgot to remove unneeded code form permissions after the previous refactoring.	2018-03-04 15:17:46 +01:00
Matej Zrimšek	53f75f3cd6	Minor permissions and their calls refactoring and fixing.	2018-03-04 14:49:41 +01:00
Matej Zrimšek	5724f8ed4d	Minor permissions refactoring, including putting the same checks for multiple permissions before the specific ones, hence preventing further evaluation if those permissions are not met.	2018-03-04 14:19:17 +01:00
Matej Zrimšek	1904099954	Put permissions helper methods inside utility module.	2018-02-21 20:22:13 +01:00
Matej Zrimšek	b8b9707c06	Fixed protocol and archive permission calls, fixed result permissions; module group managing is now also allowed on newly created groups; other permission call fixes and some refactoring.	2018-02-19 14:51:14 +01:00
Matej Zrimšek	7b07e7b347	Fixed protocol in repository permissions, and refactored it a bit.	2018-02-16 12:04:11 +01:00
Matej Zrimšek	5bda53eebf	Overall refactoring of all canaid permissions and code related to their calls.	2018-02-16 10:54:06 +01:00
Matej Zrimšek	ac5b65b121	Added some additional comments for checking if project is active in permissions.	2018-02-14 14:39:10 +01:00
Matej Zrimšek	d571ab2ed8	Fixed comments permissions for experiment level.	2018-02-14 14:39:10 +01:00
Matej Zrimšek	6b1fee4d30	Added/joined repository record assignment to task with sample assignmment to task.	2018-02-14 14:39:10 +01:00
Matej Zrimšek	f21c794a95	Fixed permission error when accessing samples page.	2018-02-14 14:39:09 +01:00
Matej Zrimšek	68206cb591	Added missing checks for whether task/experiment/project is active for experiment level permissions. Minor code refactoring and restyling.	2018-02-14 14:39:08 +01:00
Matej Zrimšek	8ef6c8f91f	Refactored remaining experiment level permissions (and everything below it).	2018-02-14 14:39:07 +01:00
Matej Zrimšek	879eda2d8f	Minor experiment level permissions refactoring.	2018-02-14 14:19:22 +01:00
Matej Zrimšek	0706d16020	Readded module level archive, move, clone and manag permissions. Corrected their usage and add the permissions check in some additional places.	2018-02-14 14:19:22 +01:00
Matej Zrimšek	c5b798017e	Minor Hound warning fixes.	2018-02-14 14:19:22 +01:00
Matej Zrimšek	d6e7ef465c	Grouped remaining permissions for experiment, protocol, task, and partially step levels. [SCI-1964]	2018-02-14 14:19:22 +01:00
Matej Zrimšek	854333b0e6	Grouped permissions for experiment with canaid gem (WIP).	2018-02-14 14:19:00 +01:00
Matej Zrimšek	70fdae567c	Forgot to add check whether project is active for archive project permission. Added some additional comments for checking if project is active in permissions.	2018-02-14 13:16:32 +01:00
Matej Zrimšek	c09ffa4043	Project permissions comments change.	2018-02-14 13:16:32 +01:00
Matej Zrimšek	d058c371d4	Readded project archive permission.	2018-02-14 13:16:32 +01:00
Matej Zrimšek	e36ec69ca9	Project level permissions refactoring (mostly names).	2018-02-14 13:16:32 +01:00
Matej Zrimšek	93536afcd5	Renamed permission 'update_project' to 'manage_project'. Some permissions fixes; added them in some places where they were missing.	2018-02-14 13:16:32 +01:00
Matej Zrimšek	13e9a2a132	Corrected some project level permissions; minor refactoring.	2018-02-14 13:16:32 +01:00
Matej Zrimšek	d423700e84	Used permissions where they were missing.	2018-02-14 13:16:32 +01:00
Matej Zrimšek	321ddc2916	Grouped existing project permissions and used 'canaid' gem.	2018-02-14 13:09:45 +01:00
Zmago Devetak	4b2098c0c4	removes unneeded permissions	2018-01-24 16:34:48 +01:00
zmagod	259880c441	add permission helpers for view project and experiment	2018-01-23 08:52:10 +01:00
mlorb	fd6dfbd561	rename create_teams	2018-01-05 16:47:48 +01:00
mlorb	99185871c4	fix naming things	2018-01-05 15:15:50 +01:00
mlorb	70ae14a9b8	refactor manage repository permissions again because of addons	2018-01-05 11:17:01 +01:00
mlorb	ec851caa80	refactor manage repository column permissions again because of addons	2018-01-05 10:43:59 +01:00
mlorb	abced181d5	refactor manage repository rows permissions again because of addons	2018-01-04 11:53:58 +01:00
mlorb	0c519b8f03	refactor manage sample elements permissions again because of addons	2018-01-03 16:37:02 +01:00
mlorb	0774b6f7e6	refactor manage samples permissions again, so that addons permissions can be added	2017-12-20 16:05:05 +01:00
mlorb	2936770c01	refactor can view team users ATWHO permission	2017-12-14 14:18:18 +01:00
mlorb	5c790287ec	refactor again manage user team permissions	2017-12-14 14:18:18 +01:00
mlorb	7c1ae6bc82	refactor manage repository permissions	2017-12-14 14:18:18 +01:00
mlorb	2918a9833d	refactor manage repository column permissions	2017-12-14 14:18:18 +01:00
mlorb	3f5e9e60b7	refactor view repository permission	2017-12-14 14:18:18 +01:00
mlorb	079ac7a4d3	refactor manage repository row permissions	2017-12-14 14:18:18 +01:00
mlorb	740ecc674b	refactor view repositories permission	2017-12-14 14:18:18 +01:00
mlorb	3ca51f097f	refactor manage sample permissions again by removing authorship and refactor manage sample elements permissions	2017-12-14 14:18:17 +01:00
mlorb	29f9414839	refactor create project permission	2017-12-14 14:18:17 +01:00
mlorb	72023c7dfe	refactor update/delete sample permissions	2017-12-14 14:18:17 +01:00
mlorb	b09377cd8d	refactor update sample permission	2017-12-14 14:18:17 +01:00
mlorb	f801ed8eb6	refactor view/export samples permission	2017-12-14 14:18:16 +01:00
mlorb	0d37f9c85a	refactor clone protocol permission	2017-12-14 14:18:16 +01:00
mlorb	f6d36ae6a2	refactor update protocol type in repository	2017-12-14 14:18:16 +01:00
mlorb	806fcbce36	refactor update protocol in repository permission	2017-12-14 14:18:16 +01:00
mlorb	e0d1ae174e	refactor read protocol in repository permission	2017-12-14 14:18:15 +01:00
mlorb	ccc2451494	refactor create sample permissions	2017-12-14 14:18:15 +01:00
mlorb	43c01b74b1	refactor create protocol permission	2017-12-14 14:18:14 +01:00
mlorb	11a3cd196c	add create, update team permission and refactor 422 respond handling in controllers	2017-12-14 14:18:14 +01:00
mlorb	8893fd668d	add create, update, delete user_team permission	2017-12-14 14:18:14 +01:00
mlorb	a0b2d3f5ef	refactor read_team permission	2017-12-14 14:18:14 +01:00