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Alex Kriuchykhin b432b06ab1
Merge pull request #3591 from biosistemika/dependabot/bundler/puma-5.5.1 
Bump puma from 5.3.1 to 5.5.1
 2021-10-13 09:29:46 +02:00
dependabot[bot] bbef4bd428
Bump puma from 5.3.1 to 5.5.1 
Bumps [puma](https://github.com/puma/puma) from 5.3.1 to 5.5.1.
- [Release notes](https://github.com/puma/puma/releases)
- [Changelog](https://github.com/puma/puma/blob/master/History.md)
- [Commits](https://github.com/puma/puma/compare/v5.3.1...v5.5.1)

---
updated-dependencies:
- dependency-name: puma
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
 2021-10-12 17:55:08 +00:00
Oleksii Kriuchykhin d6cc800679 Fix user removal from a team [SCI-6124] 2021-10-12 17:00:03 +02:00
artoscinote 3c2275476f
Order experiments by name on move workflow modal [SCI-6048] (#3562) 2021-10-11 10:19:59 +02:00
artoscinote 362658021e
Permission typo fixes [SCI-6120] (#3582) 2021-10-11 10:19:16 +02:00
artoscinote f267102e0b
Merge migrations as 'assigned' is needed in new user roles migration [SCI-6127] (#3583) 2021-10-08 15:15:21 +02:00
aignatov-bio 4705d09a96
Small permission fixes for controllers [SCI-6132] (#3581) 2021-10-08 12:43:26 +02:00
Martin Artnik c3932527d3 Fix and optimize user role migration [SCI-6127] 2021-10-07 12:21:35 +02:00
Martin Artnik c438b9a4e1 Fix duplicate public project assignments 2021-10-06 13:28:51 +02:00
artoscinote 0fe6cd66e5
Fix permission migration, fix assignable scope [SCI-6127] (#3580) 2021-10-05 13:45:52 +02:00
artoscinote 6fbb22922a
Fix project user assignment [SCI_5925] (#3577) 2021-10-05 13:45:34 +02:00
aignatov-bio c85f5187f3
Fix duplicarte results in activities filters [SCI-5948] (#3579) 2021-10-05 13:45:09 +02:00
artoscinote a18839f529
Automatically assign team admins as project owners [SCI_6119] (#3575) 2021-10-04 15:47:28 +02:00
aignatov-bio d594778fa8
Add project comment manage own permission [SCI-6115] (#3574) 2021-10-04 15:43:50 +02:00
aignatov-bio 116c09cd8a
Update users selection for notifications [SCI-6110] (#3573) 2021-10-04 15:43:28 +02:00
aignatov-bio 982aaf887c
Fix duplicate objects on dashboard [SCI-5948] (#3576) 2021-10-04 15:41:35 +02:00
Martin Artnik 6f920f1a3a Add experiment_read_canvas permission to all predefined roles [SCI-5924] 2021-10-04 11:50:08 +02:00
artoscinote 75d6a17cb7
Fix ProjectOverviewService and automatic project assignment [SCI_6117] (#3572) 2021-10-04 11:20:47 +02:00
Martin Artnik 31d77cc7c4 Don't delete user_projects yet! Needed for possible recovery actions. 2021-10-01 15:38:06 +02:00
aignatov-bio 34b0aec5b7
Update permission checks for reports [SCI-6105] (#3570) 2021-10-01 14:25:52 +02:00
aignatov-bio 3eb2c98cce
Update render permission for smart annotation [SCI-6112] (#3571) 2021-10-01 14:23:29 +02:00
artoscinote 63923f0e63
Skip inaccessible elements when generating reports [SCI-6109] (#3569) 2021-10-01 14:18:40 +02:00
Martin Artnik 4f4ab05740 Fix project search in quick start controller [SCI-5915] 2021-10-01 12:20:51 +02:00
Martin Artnik 1d20258a2e Fix typo [SCI-5924] 2021-10-01 12:20:51 +02:00
Alex Kriuchykhin 1233c9bc74
Add missing permission helper for folder deletion [SCI-6114] (#3568) 2021-10-01 10:47:32 +02:00
Martin Artnik bf96f71531 Fix comment edit method [SCI_6054] 2021-09-30 14:12:12 +02:00
aignatov-bio dba6ed8515 Use default repository table state [SCI-6089] 2021-09-30 13:30:17 +02:00
artoscinote f68d724202
Rework experiment permissions [SCI-6054] (#3538) 
* Rework experiment permissions [SCI-6054]
 2021-09-30 11:32:11 +02:00
Alex Kriuchykhin 97e5882fa3
Merge pull request #3564 from aignatov-bio/ai-sci-6097-change-name-bmt-inventory 
Rename BMT inventory in rake task [SCI-6097]
 2021-09-29 16:08:50 +02:00
Alex Kriuchykhin 79074114f4
Merge pull request #3561 from aignatov-bio/ai-sci-6103-fix-2fa-redirecting 
Fix 2fa redirecting [SCI-6103]
 2021-09-29 15:15:17 +02:00
Alex Kriuchykhin 67cb7ea7bc
Merge pull request #3560 from biosistemika/dependabot/bundler/nokogiri-1.12.5 
Bump nokogiri from 1.11.4 to 1.12.5
 2021-09-29 14:40:44 +02:00
aignatov-bio 2e7cfa3318 Rename BMT inventory in rake task [SCI-6097] 2021-09-29 13:08:57 +02:00
aignatov-bio a93f2889b7 Fix 2fa redirecting [SCI-6103] 2021-09-28 12:34:41 +02:00
dependabot[bot] 87d271c7f4
Bump nokogiri from 1.11.4 to 1.12.5 
Bumps [nokogiri](https://github.com/sparklemotion/nokogiri) from 1.11.4 to 1.12.5.
- [Release notes](https://github.com/sparklemotion/nokogiri/releases)
- [Changelog](https://github.com/sparklemotion/nokogiri/blob/main/CHANGELOG.md)
- [Commits](https://github.com/sparklemotion/nokogiri/compare/v1.11.4...v1.12.5)

---
updated-dependencies:
- dependency-name: nokogiri
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
 2021-09-27 20:53:12 +00:00
aignatov-bio c248e87adb
Add permissions checks for results controllers [SCI-6071] (#3555) 
* Add permission tests for results controller [SCI-6071]

* Update results controllers with new permissions [SCI-6071]

* Small fixes to results controllers [SCI-6071]

* Update result permission helpers [SCI-6071]
 2021-09-24 13:11:41 +02:00
Alex Kriuchykhin 313eaf7276
Merge pull request #3539 from aignatov-bio/ai-sci-6050-fix-sidebar-navigation-for-archived-task 
Fix sidebar navigation for archived task [SCI-6050]
 2021-09-24 11:47:59 +02:00
Martin Artnik 49b9ee37cc Merge branch 'develop' into features/bmt-search 2021-09-24 11:01:27 +02:00
Alex Kriuchykhin 19bac6ce68
Merge pull request #3558 from okriuchykhin/ok_SCI_6076 
Update existing roles with new permissions/abilities [SCI-6076]
 2021-09-24 10:32:57 +02:00
Oleksii Kriuchykhin f806a56cac Update existing roles with new permissions/abilities [SCI-6076] 2021-09-24 10:29:24 +02:00
Alex Kriuchykhin 5125fb5ab5
Merge pull request #3557 from okriuchykhin/ok_SCI_6061 
Update/implement permission checks in the my_modules_controller and my_modules_status_flow_controller [SCI-6061][SCI-6063]
 2021-09-24 10:25:01 +02:00
Oleksii Kriuchykhin 607b7f76cf Update/implement permission checks in the my_modules_controller and my_modules_status_flow_controller [SCI-6061][SCI-6063] 2021-09-24 10:23:28 +02:00
aignatov-bio 4472eb1023
Fix docx preview render [SCI-6035] (#3559) 2021-09-24 10:01:55 +02:00
Alex Kriuchykhin 51e7f7668a
Merge pull request #3556 from okriuchykhin/ok_SCI_6062 
Update/implement permission checks in the _my_modules_tags_controller [SCI-6062]
 2021-09-23 17:23:22 +02:00
aignatov-bio 60b261feb8 Small fixes [SCI-6050] 2021-09-23 12:31:40 +02:00
artoscinote e57f5f8e26
Merge pull request #3551 from aignatov-bio/ai-sci-6065-update-my-module-comments-controller-permission 
Update permissions for my_module_comments controller [SCI-6065]
 2021-09-23 11:47:13 +02:00
aignatov-bio 6206f8a6e9 Update permissions for my_module_comments controller [SCI-6065] 2021-09-22 12:11:36 +02:00
Alex Kriuchykhin c7760435bf
Merge pull request #3552 from aignatov-bio/ai-sci-6064-add-permissions-tests-for-my-module-repositories 
Add permissions tests for my_module_repositories and my_module_repository_snapshots [SCI-6064]
 2021-09-21 17:15:25 +02:00
Oleksii Kriuchykhin 5fb163c09a Update/implement permission checks in the _my_modules_tags_ controller [SCI-6062] 2021-09-21 16:21:55 +02:00
Miha Mencin 519dbe8fe9
Merge pull request #3554 from biosistemika/master 
Sept. hotfix
 2021-09-21 10:19:48 +02:00
Miha Mencin f10d6827e2
Merge pull request #3553 from aignatov-bio/ai-sci-add-permission-check-for-result-download 
Add permission check for results download
 2021-09-20 14:34:50 +02:00