scinote-eln/scinote-web
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4804 commits 31 branches 181 tags 166 MiB
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1055 commits

Author SHA1 Message Date
Luka Murn
586a442abc Refactor the settings page, rename setting to tooltips_enabled 2018-09-05 16:36:32 +02:00
Zanz2
5ada21725f inital experiments api functionality 2018-09-05 09:55:04 +02:00
Zanz2
e9e7fa08b0 new tooltip texts, provided by Tea 2018-09-05 08:42:00 +02:00
Zanz2
1bed2c2a3c Partially fixed according to pull request review, added comments to code review 2018-08-31 12:11:51 +02:00
Zanz2
d4aa5e60a2 Merge branch 'master' of https://github.com/biosistemika/scinote-web into zz_tooltip_settings_enable_sci2663 
Merging to update db, so i dont have to docker-clean my whole environment 2 times to switch between this branch and up to date ones
 2018-08-31 11:42:26 +02:00
Alex Kriuchykhin
18dfeb537b
Merge pull request #1269 from okriuchykhin/ok_SCI_2604 
Improve health check endpoint [SCI-2604]
 2018-08-24 16:55:47 +02:00
Oleksii Kriuchykhin
4d49671ae8 Add CRUD for inventories and columns [SCI-2690][SCI-2691][SCI-2692][SCI-2693][SCI-2694][SCI-2695] 2018-08-24 16:41:26 +02:00
Oleksii Kriuchykhin
c8efa4bffc Add SHOW, UPDATE and DELETE inventory item endpoints [SCI-2688][SCI-2689] 2018-08-24 15:48:49 +02:00
Oleksii Kriuchykhin
5c2f268471 Refactor JSON API mime type registration [SCI-2687] 2018-08-24 15:48:10 +02:00
Oleksii Kriuchykhin
730ce96a43 Add inventory item CREATE endpoint [SCI-2687] 2018-08-24 15:46:00 +02:00
Oleksii Kriuchykhin
5488fc66fc Refactor JSON API mime type registration [SCI-2687] 2018-08-24 15:37:23 +02:00
Oleksii Kriuchykhin
490376513b Add inventory item CREATE endpoint [SCI-2687] 2018-08-24 15:36:19 +02:00
Oleksii Kriuchykhin
c8abb3d9b8 Add user_identities CRUD endpoints, make API V1 togglable [SCI-2664][SCI-2686] 2018-08-24 15:27:59 +02:00
Alex Kriuchykhin
eb2d3e7951
Merge pull request #1276 from okriuchykhin/ok_SCI_2613 
Add READ user endpoint [SCI-2613]
 2018-08-24 15:23:05 +02:00
Alex Kriuchykhin
427ab5fb41
Merge pull request #1264 from okriuchykhin/ok_SCI_2615 
Add GET inventory columns API endpoint [SCI-2615]
 2018-08-24 15:22:35 +02:00
Alex Kriuchykhin
1832c0e806
Merge pull request #1262 from okriuchykhin/ok_SCI_2614 
Add read inventories and inventory items endpoints [SCI-2614][SCI-2616][SCI-2617]
 2018-08-24 15:22:13 +02:00
Oleksii Kriuchykhin
0322316d74 Make API V1 togglable [SCI-2686] 2018-08-24 12:11:28 +02:00
Oleksii Kriuchykhin
a8013118d4 Add READ user endpoint [SCI-2613] 2018-08-21 13:56:14 +02:00
Zanz2
2d1d4c78bc
Merge branch 'master' into zz_in_app_tooltips_help_sci2662 2018-08-21 11:27:01 +02:00
Zanz2
beb1d02914 Made fiew part for toggler, now debugging why checkbox doenst render properly and why it defaults to false always 2018-08-20 15:57:09 +02:00
Oleksii Kriuchykhin
6795b08a91 Refactor invite users modal initialization [SCI-2651] 2018-08-20 13:13:34 +02:00
Oleksii Kriuchykhin
1a57289009 Improve health check endpoint [SCI-2604] 2018-08-17 16:13:21 +02:00
Zanz2
8c492e1491 started implementing tooltips, and upgraded behaviour, also trying to fix some bugs with data content attribute 2018-08-17 16:03:49 +02:00
Oleksii Kriuchykhin
ecde634a2c Add OAuth2 provider [SCI-2515] 2018-08-17 13:17:59 +02:00
Zanz2
637c7dfb19 modified styling and behaviour of popovers (tooltips) also made relevant text changes, except for last one in epic 2018-08-17 11:33:44 +02:00
Zanz2
d2373980d4 Testing out new popover 2018-08-16 15:07:59 +02:00
Oleksii Kriuchykhin
3f7590bb57 Rename type for inventories and add mimetype for JSON API [SCI-2614][SCI-2616][SCI-2617] 2018-08-10 17:01:14 +02:00
Oleksii Kriuchykhin
ef7e0ac489 Add GET inventory columns API endpoint [SCI-2615] 2018-08-08 17:31:37 +02:00
Oleksii Kriuchykhin
4df9a4c9ca Fix code style warnings [SCI-2614][SCI-2616][SCI-2617] 2018-08-08 17:01:49 +02:00
Oleksii Kriuchykhin
8d11e03d47 Add read inventories and inventory items endpoints [SCI-2614][SCI-2616][SCI-2617] 2018-08-08 17:01:49 +02:00
Oleksii Kriuchykhin
298b866df4 Fix failing tests [SCI-2611][SCI-2612] 2018-08-07 14:58:02 +02:00
Oleksii Kriuchykhin
22e12d8fc3 Add GET teams and team API endpoints [SCI-2611][SCI-2612] 2018-07-31 13:40:27 +02:00
Oleksii Kriuchykhin
26b0bd9e11 Refactor tasks tree API endpoint [SCI-2609] 2018-07-30 14:48:11 +02:00
Oleksii Kriuchykhin
0e372af729 Adds API authentication with Azure AD [SCI-2608] 2018-07-24 14:21:33 +02:00
zmagod
5b9b86a2d4 fixes per @Ducz0r 's request 2018-07-04 15:23:41 +02:00
zmagod
c9dd8b356a fixes locale, fixes custom file upload style 2018-07-04 13:43:45 +02:00
zmagod
43903080ce code style fixes 2018-07-04 12:42:28 +02:00
nbernot
7aacc2b4a2 extract repository_item html form creation in to a separate 'class' 2018-06-29 14:28:06 +02:00
Zmago Devetak
7fd3eec195
Merge pull request #1219 from ZmagoD/zd_SCI_2415 
move maximum file size limit to an ENV variable [fixes SCI-2415]
 2018-06-26 18:43:16 +02:00
Oleksii Kriuchykhin
c0232d9eb2 Add extend for task child elements in reports [SCI-2377] 2018-06-19 14:34:36 +02:00
zmagod
db1944cc90 move maximum file size limit to an ENV variable [fixes SCI-2415] 2018-06-19 14:15:14 +02:00
zmagod
6a6ff534c0 fixes import flash message [fixes SCI-2398] 2018-06-15 11:12:11 +02:00
Zmago Devetak
29fe58de80
Merge pull request #1208 from ZmagoD/zd_SCI_2408 
adds an additional check if some other user has added/removed reposit…
 2018-06-13 11:30:43 +02:00
Luka Murn
9a4fdd166e Merge branch 'lm-sci-2431-fix' of https://github.com/Ducz0r/scinote-web into Ducz0r-lm-sci-2431-fix 
Conflicts:
	app/views/projects/index.html.erb
 2018-06-12 17:44:42 +02:00
zmagod
f8ac083d39 adds an additional check if some other user has added/removed repository columns [fixes SCI-2408] 2018-06-12 15:28:03 +02:00
Zmago Devetak
6ba5c587f7
Merge pull request #1189 from ZmagoD/zd_SCI_2211 
add data-hook, refactor add user to project modal to support addons
 2018-06-08 15:23:26 +02:00
Zmago Devetak
2d3738fc70
Merge pull request #1198 from ZmagoD/zd_SCI_2456 
fixes label in save report to inventory item modal [fixes SCI-2456]
 2018-06-08 15:08:53 +02:00
Zmago Devetak
eff68aead8
Merge pull request #1193 from ZmagoD/zd_SCI_2481_ 
fixes project validation message [fixes SCI-2481]
 2018-06-08 14:40:27 +02:00
Zmago Devetak
74ccaf06b9
Merge pull request #1184 from ZmagoD/zd_SCI_2417 
adds asset_text_data to global search options
 2018-06-08 14:30:52 +02:00
zmagod
d78c130a47 fixes label in save report to inventory item modal [fixes SCI-2456] 2018-06-08 11:26:33 +02:00
zmagod
11ebea573a fixes project validation message [fixes SCI-2481] 2018-06-07 16:42:11 +02:00
Luka Murn
b324a2dab3 Restyle activities page 2018-06-07 09:29:47 +02:00
Luka Murn
c07fa5adc2 Update blank page for projects 2018-06-06 17:23:22 +02:00
Luka Murn
ff485cb75d Update wording on 'save protocol to protocol repository' modal 2018-06-06 16:38:04 +02:00
Luka Murn
e0a3b5a941 Fix Save PDF to repository modal window 2018-06-06 16:29:07 +02:00
Luka Murn
b6c4f724db Update text when no experiments are found for moving tasks 2018-06-06 16:10:55 +02:00
Zmago Devetak
fad67d7730
Merge pull request #1185 from ZmagoD/zd_SCI_2468 
Limits the max. amount of rows when importing into inventories [fixes…
 2018-06-04 16:29:33 +02:00
zmagod
84170f6de0 add data-hook, refactor add user to project modal to support addons 2018-06-01 16:13:22 +02:00
Oleksii Kriuchykhin
2ddc0fb561 Improve sidebar rendering performance [SCI-2478] 2018-06-01 13:49:02 +02:00
zmagod
9abf50e7c5 Limits the max. amount of rows when importing into inventories [fixes SCI-2468] 2018-05-31 10:45:31 +02:00
zmagod
3da098cb60 fixes the issue with extraction of text from file [fixes SCI-2417] 2018-05-31 09:42:57 +02:00
zmagod
e0908fb85f adds asset_text_data to global search options 2018-05-30 18:18:09 +02:00
zmagod
89046e9787 fixes items assign flash message [fixes SCI-2395] 2018-05-29 12:54:41 +02:00
Luka Murn
80323eaf67 Merge branch 'lm-improve-sidebar-toggle' of https://github.com/Ducz0r/scinote-web into Ducz0r-lm-improve-sidebar-toggle 
Conflicts:
	app/assets/javascripts/sidebar_toggle.js.erb
 2018-05-28 12:39:24 +02:00
mlorb
2bce62cab8
Merge branch 'ux-release-1' into ml-sci-2405 2018-05-28 11:43:14 +02:00
mlorb
58ba596a24
update locales 2018-05-28 09:38:24 +02:00
zmagod
bcebc03416 adds missing locales 2018-05-28 09:17:29 +02:00
Luka Murn
f8c8887d72 Forgot to remove the constant 2018-05-27 17:23:50 +02:00
Luka Murn
b86edf20a5 Remove auto-toggling of navigation sidebar depending on width 2018-05-27 15:44:15 +02:00
mlorb
f02363dfce fix error if user is not assigned to any teams 2018-05-25 17:14:22 +02:00
mlorb
f972676f8d
Merge pull request #1158 from Ducz0r/lm-sci-2416-fix 
Update software with new logo & new brand [SCI-2416]
 2018-05-23 15:47:17 +02:00
mlorb
c4ecfc4d38 Change icons throughout sciNote - navigation, project, task cards 2018-05-22 16:55:58 +02:00
Luka Murn
dac44acf2a Rename sciNote -> SciNote (config/ folder) 2018-05-21 15:11:12 +02:00
mlorb
0fccc71fc3 fix load protocol wording and UI-style 2018-05-18 16:57:18 +02:00
mlorb
64cbddb9a0 UI/UX restyle - update colours for navigation 2018-05-18 10:41:32 +02:00
zmagod
cf4c33bf92 Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2371 2018-05-17 15:22:43 +02:00
zmagod
e019767e90 refactor save_pdf_to_inventory_item service 2018-05-17 13:17:19 +02:00
zmagod
b125863baf Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2371 2018-05-17 11:25:33 +02:00
zmagod
ca0c8cbb71 fixes typos, fixes pdf rendering 2018-05-17 11:21:34 +02:00
mlorb
06ce285ae2 add locales 2018-05-16 14:32:15 +02:00
Zmago Devetak
9d2303c777
Merge pull request #1115 from ZmagoD/zd_SCI_2321 
fixes images preview in repository/library [fixes SCI-2321]
 2018-05-16 12:05:33 +02:00
mlorb
f59ea8c7a6
Merge pull request #1137 from mlorb/ml-sci-2336-v2 
UI/UX restyle - fixes throughout application - part 2 [SCI-2336]
 2018-05-16 11:30:54 +02:00
zmagod
712a3c7ff6 fixes css, changes spinner in preview modal 2018-05-16 10:40:49 +02:00
okriuchykhin
ac6c5de83c
Merge pull request #1134 from okriuchykhin/ok_SCI_2301 
Fix initialization of default value for repositories limit [SCI-2301]
 2018-05-16 10:24:56 +02:00
Oleksii Kriuchykhin
beacdb934f Change default inventory limit to 6 [SCI-2301] 2018-05-16 10:23:36 +02:00
zmagod
4573655ec8 adds save PDF report to inventory feature [fixes SCI-2371] 2018-05-16 09:31:19 +02:00
mlorb
cea7f5a3f7 some extra style unification 2018-05-15 17:10:31 +02:00
Luka Murn
10cd494936
Update WEBINARS_URL 2018-05-15 15:58:35 +02:00
mlorb
dfe65ccaed UI/UX restyle - fixes throughout application - part 2 2018-05-14 18:33:57 +02:00
Oleksii Kriuchykhin
1e5f9519ca Fix initialization of default value for repositories limit [SCI-2301] 2018-05-11 10:34:32 +02:00
mlorb
b5649f0574
Merge branch 'ux-release-1' into ml-sci-2336-v1 2018-05-10 13:59:57 +02:00
okriuchykhin
3b4d9fe744
Merge pull request #1132 from okriuchykhin/ok_SCI_2301 
Move REPOSITORIES_LIMIT from constants to env variables [SCI-2301]
 2018-05-10 10:46:25 +02:00
Zmago Devetak
0a4deeaa35
Merge pull request #1112 from ZmagoD/zd_SCI_2261 
propagate assigned repository items in workflow [fixes SCI-2261]
 2018-05-10 09:57:49 +02:00
Oleksii Kriuchykhin
8ec643c54b Move REPOSITORIES_LIMIT from constants to env variables [SCI-2301] 2018-05-09 18:03:16 +02:00
mlorb
7df40e56c7 UI/UX restyle - fixes throughout application part one 2018-05-08 16:33:42 +02:00
Zmago Devetak
a6275062b7
Merge pull request #1126 from ZmagoD/zd_SCI_2344 
adds new string truncation method [fixes SCI-2344]
 2018-05-07 16:30:12 +02:00
Zmago Devetak
d744f24b85
Merge pull request #1118 from ZmagoD/zd_SCI_2323 
sign_out user after 7 days [fixes SCI-2323]
 2018-05-03 14:36:44 +02:00
zmagod
0b721d86b1 adds new string truncation method [fixes SCI-2344] 2018-05-03 14:24:23 +02:00
mlorb
d2c0ae241e
Merge pull request #1121 from mlorb/ml-sci-2244 
Update buttons positions and wording throughout app [SCI-2244]
 2018-05-03 11:05:15 +02:00
mlorb
ca022fead7 rename inventories buttons 2018-05-03 10:39:50 +02:00
zmagod
0584453575 fixes per @okriuchykhin 's request 2018-04-26 17:18:03 +02:00
mlorb
f97477f3f0 some extra button styling 2018-04-26 15:19:05 +02:00
mlorb
763d934aa7 fix buttons again 2018-04-26 15:02:24 +02:00
zmagod
e9642cadad Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2304 2018-04-26 14:26:30 +02:00
zmagod
8dac887f10 Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2261 2018-04-26 14:18:41 +02:00
mlorb
88d5ba369d
Merge branch 'ux-release-1' into ml-sci-2244 2018-04-26 14:07:03 +02:00
Luka Murn
cb6fe50832 Merge branch 'master' into ux-release-1 
Conflicts:
	app/assets/javascripts/repositories/index.js
 2018-04-26 11:38:54 +02:00
mlorb
9e11f3b220 update buttons positions and wording throughout app 2018-04-25 13:57:12 +02:00
Luka Murn
cd04596c62
Merge pull request #1111 from Ducz0r/lm-sci-2276-fix 
Update the code for repository table states so it (hopefully) causes less errors [SCI-2276]
 2018-04-25 12:37:27 +02:00
Luka Murn
bd6f97fabc Add initializer to include helpers in all assets (including .js) 2018-04-25 10:51:19 +02:00
zmagod
503ad1ba20 removes samples from views [fixes SCI-2304] 2018-04-24 08:26:55 +02:00
zmagod
824962c084 propagate assigned repository items in workflow [fixes SCI-2261] 2018-04-23 11:33:16 +02:00
Luka Murn
68caf56ec2 Add comment to constants 2018-04-20 12:31:22 +02:00
Luka Murn
21e7e7057e Refactor all the methods into two new services 2018-04-20 12:31:22 +02:00
Luka Murn
5e2622ecfc Change default repository state to Ruby representation 
Also remove some dead code from repositories datatables
 2018-04-20 12:31:22 +02:00
zmagod
e96b690a5b removes reports link from secondary navigation, fix bug with turbolinks 2018-04-20 11:57:52 +02:00
zmagod
dafa29d4bf Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2124 2018-04-20 10:33:15 +02:00
mlorb
3249d5db0d
Merge pull request #1100 from mlorb/ml-sci-2303 
Update reports show page to work with new navigation [SCI-2303]
 2018-04-20 09:50:35 +02:00
Zmago Devetak
93fc1af12d
Merge pull request #1083 from ZmagoD/zd_SCI_2259 
set limit on maximum number of dropdown list items [fixes SCI-2259]
 2018-04-19 17:17:54 +02:00
Zmago Devetak
1290435372
Merge pull request #1086 from ZmagoD/zd_SCI_2207 
enables copying of repository items [fixes SCI-2207]
 2018-04-19 17:13:43 +02:00
mlorb
d7eccac289
Merge pull request #1099 from mlorb/ml-sci-2167 
Remove breadcrumbs throughout application [SCI-2167]
 2018-04-19 16:11:37 +02:00
Zmago Devetak
540dff25e7
Merge pull request #1091 from ZmagoD/zd_SCI_2254 
adds correct preview images to files [fixes SCI-2254]
 2018-04-19 14:04:24 +02:00
zmagod
ce52eb851b add validation to dropdown items 2018-04-19 14:02:42 +02:00
zmagod
66cc76f640 add view label in locales 2018-04-19 12:49:32 +02:00
zmagod
9d282d1800 adds new reports index page [fixes SCI-2124] 2018-04-18 16:47:52 +02:00
mlorb
cc34376253 update reports show page to work with new navigation 2018-04-18 14:40:53 +02:00
Luka Murn
2290b75f8a
Merge pull request #1097 from biosistemika/lm-fix-production-compiling 
Change JS compressor from :uglifier to Uglifier.new(harmony: true)
 2018-04-17 17:46:01 +02:00
mlorb
c08d72be36 remove breadcrumbs throughout application 2018-04-17 17:00:04 +02:00
Luka Murn
a633861e1f Change JS compressor from :uglifier to Uglifier.new(harmony: true) 
This should fix the command rails assets:precompile for production
environment.
 2018-04-17 09:05:19 +02:00
mlorb
04a20ab7ec change links 2018-04-16 17:05:22 +02:00
zmagod
bef166ff30 hides the create new inventory button for non admin users [fixes SCI-2296] 2018-04-13 13:39:58 +02:00
Zmago Devetak
d466fdf8e8
Merge pull request #1089 from ZmagoD/zd_SCI_2292 
remove unneeded label in destroy repository record modal [fixes SCI-2…
 2018-04-12 16:58:28 +02:00
Zmago Devetak
09e5579f0f
Merge pull request #1087 from ZmagoD/zd_SCI_2240 
rename Repository/Library => Inventory [fixes SCI-2240]
 2018-04-12 16:58:08 +02:00
Zmago Devetak
9d58292dcf
fix 2018-04-12 16:44:38 +02:00
Zmago Devetak
f83390e5ad
fix 2018-04-12 16:20:05 +02:00
zmagod
d084998906 remove unneeded label in destroy repository record modal [fixes SCI-2292] 2018-04-12 15:00:41 +02:00
Luka Murn
09c60d2468 Fixes per @Ducz0r's request 2018-04-12 14:38:22 +02:00
zmagod
309bd04e61 rename Repository/Library => Inventory [fixes SCI-2240] 2018-04-12 14:11:26 +02:00
Luka Murn
9bf8b5d864 Merge branch 'ok_SCI_1860' of https://github.com/okriuchykhin/scinote-web into okriuchykhin-ok_SCI_1860 
Conflicts:
	Makefile
	app/assets/javascripts/projects/index.js.erb
	app/assets/stylesheets/themes/scinote.scss
	config/locales/en.yml
 2018-04-12 13:16:46 +02:00
zmagod
6291857bbf enables copying of repository items [fixes SCI-2207] 2018-04-11 17:17:19 +02:00
zmagod
ea4bd8831f fixes bug with CSRF on file upload, fixes turbolink issues with remote form submition [fixes SCI-2284] 2018-04-10 13:19:53 +02:00
mlorb
a10f671184
Merge pull request #1081 from mlorb/ml-sci-2123 
Refactor settings into the new navigation bar [SCI-2123]
 2018-04-09 13:21:16 +02:00
zmagod
b12f6f1b92 set limit on maximum number of dropdown list items [fixes SCI-2259] 2018-04-09 12:50:25 +02:00
mlorb
8a35ce5c58 add locales 2018-04-09 10:53:03 +02:00
Zmago Devetak
bdb6554870
Merge pull request #1049 from ZmagoD/zd_SCI_2218_2219 
adds manage columns page
 2018-04-06 17:06:28 +02:00
mlorb
0c851f227c remove unused locals 2018-04-06 15:00:19 +02:00
mlorb
70dfe66b2d refactoring 2018-04-06 14:20:40 +02:00
zmagod
cf7761daaa Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into ok_SCI_2223 2018-04-06 12:56:39 +02:00
mlorb
b8e91e91a1 refactor settings into the new navigation bar 2018-04-05 16:30:02 +02:00
Luka Murn
386ede0400 Add special middleware for handling of Rails 5.1 WOPI errors 
Closes SCI-2266.
 2018-04-05 13:26:08 +02:00