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15771 commits 31 branches 181 tags 166 MiB
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250 commits

Author SHA1 Message Date
aignatov-bio
d594778fa8
Add project comment manage own permission [SCI-6115] (#3574) 2021-10-04 15:43:50 +02:00
Alex Kriuchykhin
1233c9bc74
Add missing permission helper for folder deletion [SCI-6114] (#3568) 2021-10-01 10:47:32 +02:00
artoscinote
f68d724202
Rework experiment permissions [SCI-6054] (#3538) 
* Rework experiment permissions [SCI-6054]
 2021-09-30 11:32:11 +02:00
aignatov-bio
c248e87adb
Add permissions checks for results controllers [SCI-6071] (#3555) 
* Add permission tests for results controller [SCI-6071]

* Update results controllers with new permissions [SCI-6071]

* Small fixes to results controllers [SCI-6071]

* Update result permission helpers [SCI-6071]
 2021-09-24 13:11:41 +02:00
Oleksii Kriuchykhin
f806a56cac Update existing roles with new permissions/abilities [SCI-6076] 2021-09-24 10:29:24 +02:00
Oleksii Kriuchykhin
607b7f76cf Update/implement permission checks in the my_modules_controller and my_modules_status_flow_controller [SCI-6061][SCI-6063] 2021-09-24 10:23:28 +02:00
aignatov-bio
6206f8a6e9 Update permissions for my_module_comments controller [SCI-6065] 2021-09-22 12:11:36 +02:00
Martin Artnik
04413c6cc6 Make permission names consistent with spreadsheet [SCI-6056] 2021-09-17 10:41:28 +02:00
Martin Artnik
e8f57e9e99 Reworked MyModule permissions [SCI-6056] 2021-09-14 11:08:35 +02:00
Alex Kriuchykhin
268b8d6bf1
Merge pull request #3530 from artoscinote/ma_SCI_6041 
Update project permission helpers [SCI-6041]
 2021-09-07 12:28:00 +02:00
Alex Kriuchykhin
fdbeedd5e6
Merge pull request #3520 from okriuchykhin/ok_SCI_5920 
Allow project viewing for team admins [SCI-5920]
 2021-09-07 12:19:17 +02:00
Martin Artnik
975a8910a8 Updated project permission helpers [SCI-6041] 2021-09-07 11:27:52 +02:00
Martin Artnik
ade1385392 Merge branch 'develop' into features/bmt-search 2021-09-06 10:51:04 +02:00
Martin Artnik
7e6ca3be8a Merge branch 'develop' into features/new_permissions 2021-09-06 10:33:32 +02:00
Oleksii Kriuchykhin
f591bac3b1 Allow project viewing for team admins [SCI-5920] 2021-08-31 14:21:02 +02:00
aignatov-bio
b269f3f612 Add saved filters backend [SCI-5977] (#3509) 
* Add saved filters backend [SCI-5977]

* Rework filter saving [SCI-5977]

Co-authored-by: Martin Artnik <martin@scinote.net>
 2021-08-30 10:49:15 +02:00
artoscinote
ef0e45be04 Implemented frontend for BMT-type repository [SCI-5991] (#3503) 
* Implemented frontend for BMT-type repository [SCI-5991]

* Refactor repository view, fix column reordering [SCI-5991]

* Remove type mapping for default columns in column management [SCI-5991]

* Repository table partial fix, remove non-relevant migration [SCI-5991]
 2021-08-30 10:49:15 +02:00
Oleksii Kriuchykhin
d67f7691a1 Add configuration variable for webhooks, disable by default [SCI-6031] 2021-08-26 14:08:15 +02:00
Martin Artnik
57d5e6c2a7 Merge branch 'develop' into features/barcodes 2021-08-03 13:36:36 +02:00
Martin Artnik
a82af505eb Merge branch 'develop' into features/webhooks 2021-08-02 16:22:52 +02:00
aignatov-bio
43571b5692
Print labels changes [SCI-5943] (#3461) 2021-08-02 15:38:37 +02:00
Oleksii Kriuchykhin
d1208bad0b Merge branch 'develop' into features/new_permissions 2021-07-07 13:44:36 +02:00
zmagoD
ad10befcc4 add new manage access permission to PET levels 2021-06-19 17:17:57 +02:00
Martin Artnik
5137a5b1a3 Fix illegal return statement [SCI-5634] 2021-06-15 13:16:51 +02:00
aignatov-bio
bf781c2ca4 Small fixes [SCI-5765] 2021-06-01 10:58:05 +02:00
aignatov-bio
3c7592657c Add activity filters [SCI-5765] 2021-05-31 13:39:10 +02:00
zmagoD
5ee38966a0 Merge branch 'features/new_permissions' of https://github.com/biosistemika/scinote-web into new_perimssions-managing-project-ui 2021-05-11 08:36:39 +02:00
zmagoD
ab47c8695f add read permission and controller tests for new endpoints 2021-05-09 18:23:50 +02:00
zmagoD
c0eb38b564 Merge branch 'develop' of https://github.com/biosistemika/scinote-web into features/new_permissions 2021-05-08 10:33:43 +02:00
Oleksii Kriuchykhin
49194d1a45 Prepare initial user roles in the database [SCI-5435] 2021-02-22 11:58:40 +01:00
Oleksii Kriuchykhin
3b90225c5a Add new permission checking logic [SCI-5436] 2021-02-22 11:55:48 +01:00
mlorb
20dc9967f5
Merge pull request #3113 from mlorb/ml-sci-5311 
Implement the option of deleting empty folders [SCI-5311]
 2021-02-15 10:27:05 +01:00
Urban Rotnik
1ae0b42c2c Fix Dots and Checkbox visibility on experiment cards 2021-02-12 13:25:12 +01:00
Mojca Lorber
7071f4a6c5 Send selected folders param to modal 2021-02-11 18:27:16 +01:00
Urban Rotnik
33b68b8aa7 Fix permissions for result deletion 2021-01-20 09:00:45 +01:00
aignatov-bio
6011bb36b6 Fix archived experiment dropdown and archived view for projects page [SCI-5392] 2021-01-15 15:08:27 +01:00
Oleksii Kriuchykhin
67b3f853d7 Merge branch 'develop' into features/folders 2020-12-18 14:51:21 +01:00
Miha Mencin
f284ef1592
Merge pull request #3009 from okriuchykhin/ok_SCI_5276 
Archiving: update archived TASK screen layout [SCI-5276]
 2020-12-17 13:46:35 +01:00
Oleksii Kriuchykhin
7bb334e737 Archiving: update archived TASK screen layout [SCI-5276] 2020-12-17 13:26:44 +01:00
Urban Rotnik
ad8cf8a1fa Refactor result permissions 2020-12-14 12:50:54 +01:00
Oleksii Kriuchykhin
94b6c96e48 Remove the 'Archived tasks' tab and refactor sidebar to include archived [SCI-5273] 2020-12-12 22:46:30 +01:00
aignatov-bio
a32a2f28d3 Fix permission for assets in results 2020-12-08 15:31:57 +01:00
Mojca Lorber
d7e3b57d0d [SCI-5240] Implement Create new folder function 2020-12-01 09:59:08 +01:00
Oleksii Kriuchykhin
eafc4cf367 Fix permission check for archived tasks [SCI-5235] 2020-11-20 14:39:17 +01:00
Mojca Lorber
8aed48d1ae Merge branch 'develop' into features/office-file-previews 2020-11-02 13:45:06 +01:00
aignatov-bio
f51416d83a Update permission markup 2020-10-29 14:59:14 +01:00
aignatov-bio
d99e279ecc Add gallery to file preview 2020-10-29 14:30:26 +01:00
Urban Rotnik
aa1520bfb8 Merge branch 'develop' into jg_sci_2228 2020-10-22 14:21:39 +02:00
Oleksii Kriuchykhin
134e549ed5 Improve performance of fetching of statuses [SCI-5062] 2020-09-25 10:14:57 +02:00
Oleksii Kriuchykhin
a7c6ab9d89 Move some consequence executon into background process [SCI-4978] 2020-09-11 16:18:39 +02:00
Urban Rotnik
a259800590 Merge branch 'develop' into jg_sci_2228 2020-08-31 16:29:23 +02:00
Urban Rotnik
5923a4c014 Merge branch 'develop' into features/task-flows 2020-08-25 15:30:22 +02:00
Oleksii Kriuchykhin
94588e4698 Refactor task archive and move permissions [SCI-4817] 2020-07-24 17:00:42 +02:00
Urban Rotnik
512d6f3229 Add actions for update status, clean old complete actions 2020-07-22 16:12:34 +02:00
Oleksii Kriuchykhin
fa62b33a42 Add status implications checks to the permissions [SCI-4825] 2020-07-21 16:00:09 +02:00
Oleksii Kriuchykhin
29f62419bd Improve repository archive/restore actions [SCI-4780] 2020-06-24 11:32:20 +02:00
Mojca Lorber
6e8062179c Implement archiving and restoring of whole inventories 2020-06-18 18:07:23 +02:00
Miha Mencin
26f4f24cc6 SCI-4674 fix stupid 2020-05-25 16:30:22 +02:00
Miha Mencin
77e1feda97 SCI-4674 name permissions more properly 2020-05-25 16:29:00 +02:00
Miha Mencin
5f195b3622 SCI-4674 check if experiment and projects are active during snapshot creation 2020-05-25 15:56:39 +02:00
Miha Mencin
5994e8c6a6 SCI-4674 create special permissions for snapshots on task 2020-05-25 15:49:31 +02:00
Oleksii Kriuchykhin
c0521c3ca7 Prevent the inventory items editing while snapshot is being created [SCI-4629] 2020-05-15 17:46:59 +02:00
Oleksii Kriuchykhin
25f9c5bc7d Refactor Repository permissions and implement deduplication for files in snapshots [SCI-4597] 2020-05-06 15:17:54 +02:00
Oleksii Kriuchykhin
f811d11c59 Add versions sidebar to assigned repository rows full view modal [SCI-4525] 2020-04-21 14:49:36 +02:00
Oleksii Kriuchykhin
3a67c99982 Switch to STI for repositories, fix cell values snapshotting [SCI-4516] 2020-04-09 12:33:04 +02:00
Oleksii Kriuchykhin
a9c3102835 Add repository snapshots with service, refactor item assigning [SCI-4516] 2020-04-07 18:26:39 +02:00
Oleksii Kriuchykhin
02817a5a1e Refactor inventory limit checks [SCI-4434] 2020-03-05 15:26:25 +01:00
Alex Kriuchykhin
f201826eb8
Merge pull request #2426 from okriuchykhin/ok_SCI_4383 
Add global repositories limit [SCI-4383]
 2020-03-05 12:45:02 +01:00
Oleksii Kriuchykhin
62c19f7c02 Add invite users to the team permission check [SCI-4381] 2020-02-26 17:25:38 +01:00
Oleksii Kriuchykhin
63e557ea9e Add global repositories limit [SCI-4383] 2020-02-21 14:40:17 +01:00
Miha Mencin
04a6645cfc Separate view/edit/modify permissions SCI-4058 2019-11-20 17:12:47 +01:00
Oleksii Kriuchykhin
3509543e7b Merge branch 'master' into ok_SCI_3881 2019-09-16 11:56:49 +02:00
Oleksii Kriuchykhin
c068901b00 Upgrade Rails to 6.0 [SCI-3745] 2019-09-12 17:24:08 +02:00
aignatov-bio
0810699770
Update shared inventory permissions [SCI-3802] (#2009) 
* Update shared inventory permissions

* Fix tests and simplify condition for placeholder
 2019-08-23 10:57:02 +02:00
Anton Ignatov
a2c50cbe38 Add new permission check for share button 2019-08-20 15:08:53 +02:00
Urban Rotnik
0ce331227c Update permission and model to share repository over all teams 2019-08-13 14:07:24 +02:00
Mojca Lorber
b005f90e95 Add tests for permission can_read_repository 2019-08-09 14:13:01 +02:00
Mojca Lorber
7e9be932f3 Make scope for repositories accessible by teams and simplify read permission 2019-08-09 14:13:00 +02:00
Mojca Lorber
cac7dab440 Show shared inventories in left navigation and fix read repository permission 2019-08-09 14:13:00 +02:00
Urban Rotnik
077369d960 Update permissions for Repositories 2019-08-09 14:12:59 +02:00
Luka Murn
83bb89fdf5 Cherry-picked commit from ZZ (and LM)'s various changes 2019-07-26 10:13:14 +02:00
Jure Grabnar
04b1d0e142 Remove blank line 2018-10-26 11:00:13 +02:00
Jure Grabnar
3903b4a6f2 Refactor read_project/export_project permissions 2018-10-26 10:58:59 +02:00
Jure Grabnar
bd5a2a43fd Add can_export_project? permission 
Closes [SCI-2805].
 2018-10-19 08:41:39 +02:00
Oleksii Kriuchykhin
8ec643c54b Move REPOSITORIES_LIMIT from constants to env variables [SCI-2301] 2018-05-09 18:03:16 +02:00
Luka Murn
cb6fe50832 Merge branch 'master' into ux-release-1 
Conflicts:
	app/assets/javascripts/repositories/index.js
 2018-04-26 11:38:54 +02:00
zmagod
199a2a23bf fixes per @mlorb 's request 2018-04-23 12:26:21 +02:00
zmagod
9d282d1800 adds new reports index page [fixes SCI-2124] 2018-04-18 16:47:52 +02:00
Oleksii Kriuchykhin
d8d2d75631 Fix repository rows permissions [SCI-2265] 2018-04-02 20:48:44 +02:00
zmagod
659a088058 refactor smart annotation parser, adds repository item to smart annotation parser [fixes SCI-2222] 2018-03-29 15:55:26 +02:00
Oleksii Kriuchykhin
aa69624f9f Fix sample assign permissions [SCI-2249] 2018-03-25 20:10:32 +02:00
Oleksii Kriuchykhin
cd9260f439 Hide delete button for guest users in repository [SCI-2163] 2018-03-09 16:19:36 +01:00
Oleksii Kriuchykhin
bd9f5c1cda Fix manage repository permissions [SCI-2136] 2018-03-07 13:41:57 +01:00
Oleksii Kriuchykhin
b5eb821cfa Fix sample's custom column permissions [SCI-2135] 2018-03-06 16:40:25 +01:00
Matej Zrimšek
fa7710fb80 Forgot to remove unneeded code form permissions after the previous refactoring. 2018-03-04 15:17:46 +01:00
Matej Zrimšek
53f75f3cd6 Minor permissions and their calls refactoring and fixing. 2018-03-04 14:49:41 +01:00
Matej Zrimšek
5724f8ed4d Minor permissions refactoring, including putting the same checks for multiple permissions before the specific ones, hence preventing further evaluation if those permissions are not met. 2018-03-04 14:19:17 +01:00
Matej Zrimšek
1904099954 Put permissions helper methods inside utility module. 2018-02-21 20:22:13 +01:00
Matej Zrimšek
b8b9707c06 Fixed protocol and archive permission calls, fixed result permissions; module group managing is now also allowed on newly created groups; other permission call fixes and some refactoring. 2018-02-19 14:51:14 +01:00
Matej Zrimšek
7b07e7b347 Fixed protocol in repository permissions, and refactored it a bit. 2018-02-16 12:04:11 +01:00
Matej Zrimšek
5bda53eebf Overall refactoring of all canaid permissions and code related to their calls. 2018-02-16 10:54:06 +01:00
Matej Zrimšek
ac5b65b121 Added some additional comments for checking if project is active in permissions. 2018-02-14 14:39:10 +01:00
Matej Zrimšek
d571ab2ed8 Fixed comments permissions for experiment level. 2018-02-14 14:39:10 +01:00
Matej Zrimšek
6b1fee4d30 Added/joined repository record assignment to task with sample assignmment to task. 2018-02-14 14:39:10 +01:00
Matej Zrimšek
f21c794a95 Fixed permission error when accessing samples page. 2018-02-14 14:39:09 +01:00
Matej Zrimšek
68206cb591 Added missing checks for whether task/experiment/project is active for experiment level permissions. Minor code refactoring and restyling. 2018-02-14 14:39:08 +01:00
Matej Zrimšek
8ef6c8f91f Refactored remaining experiment level permissions (and everything below it). 2018-02-14 14:39:07 +01:00
Matej Zrimšek
879eda2d8f Minor experiment level permissions refactoring. 2018-02-14 14:19:22 +01:00
Matej Zrimšek
0706d16020 Readded module level archive, move, clone and manag permissions. Corrected their usage and add the permissions check in some additional places. 2018-02-14 14:19:22 +01:00
Matej Zrimšek
c5b798017e Minor Hound warning fixes. 2018-02-14 14:19:22 +01:00
Matej Zrimšek
d6e7ef465c Grouped remaining permissions for experiment, protocol, task, and partially step levels. [SCI-1964] 2018-02-14 14:19:22 +01:00
Matej Zrimšek
854333b0e6 Grouped permissions for experiment with canaid gem (WIP). 2018-02-14 14:19:00 +01:00
Matej Zrimšek
70fdae567c Forgot to add check whether project is active for archive project permission. Added some additional comments for checking if project is active in permissions. 2018-02-14 13:16:32 +01:00
Matej Zrimšek
c09ffa4043 Project permissions comments change. 2018-02-14 13:16:32 +01:00
Matej Zrimšek
d058c371d4 Readded project archive permission. 2018-02-14 13:16:32 +01:00
Matej Zrimšek
e36ec69ca9 Project level permissions refactoring (mostly names). 2018-02-14 13:16:32 +01:00
Matej Zrimšek
93536afcd5 Renamed permission 'update_project' to 'manage_project'. Some permissions fixes; added them in some places where they were missing. 2018-02-14 13:16:32 +01:00
Matej Zrimšek
13e9a2a132 Corrected some project level permissions; minor refactoring. 2018-02-14 13:16:32 +01:00
Matej Zrimšek
d423700e84 Used permissions where they were missing. 2018-02-14 13:16:32 +01:00
Matej Zrimšek
321ddc2916 Grouped existing project permissions and used 'canaid' gem. 2018-02-14 13:09:45 +01:00
Zmago Devetak
4b2098c0c4
removes unneeded permissions 2018-01-24 16:34:48 +01:00
zmagod
259880c441 add permission helpers for view project and experiment 2018-01-23 08:52:10 +01:00
mlorb
fd6dfbd561 rename create_teams 2018-01-05 16:47:48 +01:00
mlorb
99185871c4 fix naming things 2018-01-05 15:15:50 +01:00
mlorb
70ae14a9b8 refactor manage repository permissions again because of addons 2018-01-05 11:17:01 +01:00
mlorb
ec851caa80 refactor manage repository column permissions again because of addons 2018-01-05 10:43:59 +01:00
mlorb
abced181d5 refactor manage repository rows permissions again because of addons 2018-01-04 11:53:58 +01:00
mlorb
0c519b8f03 refactor manage sample elements permissions again because of addons 2018-01-03 16:37:02 +01:00
mlorb
0774b6f7e6 refactor manage samples permissions again, so that addons permissions can be added 2017-12-20 16:05:05 +01:00
mlorb
2936770c01 refactor can view team users ATWHO permission 2017-12-14 14:18:18 +01:00
mlorb
5c790287ec refactor again manage user team permissions 2017-12-14 14:18:18 +01:00
mlorb
7c1ae6bc82 refactor manage repository permissions 2017-12-14 14:18:18 +01:00
mlorb
2918a9833d refactor manage repository column permissions 2017-12-14 14:18:18 +01:00
mlorb
3f5e9e60b7 refactor view repository permission 2017-12-14 14:18:18 +01:00
mlorb
079ac7a4d3 refactor manage repository row permissions 2017-12-14 14:18:18 +01:00
mlorb
740ecc674b refactor view repositories permission 2017-12-14 14:18:18 +01:00
mlorb
3ca51f097f refactor manage sample permissions again by removing authorship and refactor manage sample elements permissions 2017-12-14 14:18:17 +01:00
mlorb
29f9414839 refactor create project permission 2017-12-14 14:18:17 +01:00
mlorb
72023c7dfe refactor update/delete sample permissions 2017-12-14 14:18:17 +01:00
mlorb
b09377cd8d refactor update sample permission 2017-12-14 14:18:17 +01:00
mlorb
f801ed8eb6 refactor view/export samples permission 2017-12-14 14:18:16 +01:00
mlorb
0d37f9c85a refactor clone protocol permission 2017-12-14 14:18:16 +01:00
mlorb
f6d36ae6a2 refactor update protocol type in repository 2017-12-14 14:18:16 +01:00
mlorb
806fcbce36 refactor update protocol in repository permission 2017-12-14 14:18:16 +01:00
mlorb
e0d1ae174e refactor read protocol in repository permission 2017-12-14 14:18:15 +01:00
mlorb
ccc2451494 refactor create sample permissions 2017-12-14 14:18:15 +01:00
mlorb
43c01b74b1 refactor create protocol permission 2017-12-14 14:18:14 +01:00
mlorb
11a3cd196c add create, update team permission and refactor 422 respond handling in controllers 2017-12-14 14:18:14 +01:00
mlorb
8893fd668d add create, update, delete user_team permission 2017-12-14 14:18:14 +01:00
mlorb
a0b2d3f5ef refactor read_team permission 2017-12-14 14:18:14 +01:00