Commit graph

17391 commits

Author SHA1 Message Date
dependabot[bot] 109b918583
Bump ruby-saml from 1.16.0 to 1.17.0 (#7841)
Bumps [ruby-saml](https://github.com/saml-toolkits/ruby-saml) from 1.16.0 to 1.17.0.
- [Release notes](https://github.com/saml-toolkits/ruby-saml/releases)
- [Changelog](https://github.com/SAML-Toolkits/ruby-saml/blob/master/CHANGELOG.md)
- [Commits](https://github.com/saml-toolkits/ruby-saml/compare/v1.16.0...v1.17.0)

---
updated-dependencies:
- dependency-name: ruby-saml
  dependency-type: indirect
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-09-11 09:50:04 +02:00
aignatov-bio 8d5adad6b5
Merge pull request #7840 from aignatov-bio/ai-sci-10954-import-items-to-box
Add import/export for box [SCI-10954]
2024-09-10 15:34:28 +02:00
Anton 43cec17f00 Add import/export for box [SCI-10954] 2024-09-10 15:14:52 +02:00
Martin Artnik 79409830af
Merge pull request #7839 from artoscinote/ma_SCI_11015
Fix destroying repository rows [SCI-11015]
2024-09-10 11:24:43 +02:00
Martin Artnik e3a5b15180 Fix destroying repository rows [SCI-11015] 2024-09-10 10:19:28 +02:00
Martin Artnik 7f47256e3a
Fix creating storage locations [SCI-10865] 2024-09-09 12:46:42 +02:00
Martin Artnik 1cac358a6f Fix Dockerfile 2024-09-09 11:18:38 +02:00
Martin Artnik d6e588c629 Merge branch 'develop' into features/storage-locations 2024-09-09 10:57:33 +02:00
Martin Artnik 57444dca65 Skip initialization of sharable models if DB is not connected 2024-09-09 10:39:43 +02:00
Martin Artnik 34c8da949f
Merge pull request #7827 from artoscinote/ma_SCI_10865
Implement storage location sharing [SCI-10865]
2024-09-09 10:25:03 +02:00
Alex Kriuchykhin 535d24fe4f
Move from running application containers with root user to dedicated scinote user [SCI-11020] (#7834) 2024-09-06 12:54:15 +02:00
aignatov-bio fb0e73bf80
Merge pull request #7831 from aignatov-bio/ai-sci-11009-fix-xss-on-table-task-name
Fix task table name renderer [SCI-11009]
2024-09-05 13:02:11 +02:00
Anton c641e6b552 Fix task table name renderer [SCI-11009] 2024-09-05 12:17:57 +02:00
Martin Artnik e57dc3d213 Fix shared objects for different repository types [SCI-10865] 2024-09-04 14:04:56 +02:00
Martin Artnik c895047114 Remove unused permission helpers [SCI-10865] 2024-09-04 13:36:12 +02:00
aignatov-bio 23d8909a85
Merge pull request #7829 from aignatov-bio/ai-sci-11010-add-blacklist-for-executables
Add restricted extensions for scinote edit [SCI-11010]
2024-09-04 11:30:00 +02:00
Anton e5196774fd Add restricted extensions for scinote edit [SCI-11010] 2024-09-04 11:10:03 +02:00
Martin Artnik 5ba07aec28 Implement storage location sharing logic and permissions [SCI-10865] 2024-09-03 15:50:10 +02:00
aignatov-bio 28810ed1f5
Merge pull request #7826 from aignatov-bio/ai-sci-11009-move-table-renderers-to-components
Move table renderers to components [SCI-11009]
2024-09-03 13:27:10 +02:00
Anton f8fd07695f Move table renderers to components [SCI-11009] 2024-09-03 13:22:57 +02:00
dependabot[bot] e42a99d2af
Bump axios from 1.7.2 to 1.7.4 (#7803)
Bumps [axios](https://github.com/axios/axios) from 1.7.2 to 1.7.4.
- [Release notes](https://github.com/axios/axios/releases)
- [Changelog](https://github.com/axios/axios/blob/v1.x/CHANGELOG.md)
- [Commits](https://github.com/axios/axios/compare/v1.7.2...v1.7.4)

---
updated-dependencies:
- dependency-name: axios
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-09-02 13:45:46 +02:00
dependabot[bot] a0011c6ee1
Bump rexml from 3.3.3 to 3.3.6 (#7812)
Bumps [rexml](https://github.com/ruby/rexml) from 3.3.3 to 3.3.6.
- [Release notes](https://github.com/ruby/rexml/releases)
- [Changelog](https://github.com/ruby/rexml/blob/master/NEWS.md)
- [Commits](https://github.com/ruby/rexml/compare/v3.3.3...v3.3.6)

---
updated-dependencies:
- dependency-name: rexml
  dependency-type: indirect
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-09-02 13:45:15 +02:00
Alex Kriuchykhin c8af20a822
Restrict ActiveStorage previews format to only PNG or JPEG [SCI-10969] (#7810) 2024-09-02 13:44:57 +02:00
dependabot[bot] c78dc20c0f
Bump webpack from 5.77.0 to 5.94.0 (#7824)
Bumps [webpack](https://github.com/webpack/webpack) from 5.77.0 to 5.94.0.
- [Release notes](https://github.com/webpack/webpack/releases)
- [Commits](https://github.com/webpack/webpack/compare/v5.77.0...v5.94.0)

---
updated-dependencies:
- dependency-name: webpack
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-09-02 13:44:24 +02:00
Martin Artnik c0d386f0c1 Merge branch 'develop' into features/storage-locations 2024-08-30 13:28:19 +02:00
Martin Artnik 88462de1d5
Merge pull request #7823 from scinote-eln/develop
Shared task fixes
2024-08-28 12:06:41 +02:00
Martin Artnik 8a7ac76085
Merge pull request #7821 from artoscinote/ma_SCI_11007
Fix shared task assigned items [SCI-11007]
2024-08-28 11:47:45 +02:00
Martin Artnik efe19a776e Fix shared task assigned items [SCI-11007] 2024-08-28 11:42:30 +02:00
Martin Artnik 83642d1655
Merge pull request #7820 from artoscinote/ma_SCI_11007
Fix shared tasks [SCI-11007]
2024-08-28 11:22:27 +02:00
Martin Artnik 2ebb88c300 Fix shared tasks [SCI-11007] 2024-08-28 11:19:27 +02:00
Martin Artnik 4f3b6f7959
Merge pull request #7819 from scinote-eln/develop
August 2024 Technical Release
2024-08-27 16:50:15 +02:00
Martin Artnik f717f43b9b
Bump version to 1.36.2 2024-08-27 16:48:53 +02:00
Martin Artnik 6260ca7a7c
Merge pull request #7818 from artoscinote/ma_SCI_11005
Fix project export permission checks [SCI-11005]
2024-08-27 14:32:48 +02:00
Martin Artnik e4e547aa6d Fix project export permission checks [SCI-11005] 2024-08-27 14:21:02 +02:00
Martin Artnik 40355ae6c8 Generalize team sharing logic, implement sharing for storage locations [SCI-10865] 2024-08-27 13:31:50 +02:00
Martin Artnik 0581931ad9 Merge branch 'develop' into features/storage-locations 2024-08-27 13:18:04 +02:00
Martin Artnik bcd124df51
Merge pull request #7816 from artoscinote/ma_SCI_11004
Update mapping step selections once an item is selected [SCI-11004]
2024-08-27 11:29:44 +02:00
Martin Artnik 726b1973f1 Update mapping step selections once an item is selected [SCI-11004] 2024-08-27 11:20:46 +02:00
Martin Artnik ff0a5e3b2a
Merge pull request #7814 from artoscinote/ma_SCI_11000
Fix deleted result activities, experiment activity permission checks, dashboard permission checks [SCI-11000]
2024-08-26 12:53:50 +02:00
Martin Artnik 64f7f1bad4 Fix deleted result activities, experiment activity permission checks, dashboard permission checks [SCI-11000] 2024-08-26 12:07:13 +02:00
Martin Artnik a85fc77261 Merge branch 'develop' into features/storage-locations 2024-08-26 11:12:04 +02:00
Martin Artnik 8ba8e3b2c8
Merge pull request #7813 from artoscinote/ma_SCI_11000
Fix activity permission checks [SCI-11000]
2024-08-26 10:57:52 +02:00
Martin Artnik a957e2e442 Simplify activity queries [SCI-11000] 2024-08-26 10:54:24 +02:00
Martin Artnik 74e6d5074e Fix permission check for protocol template activities [SCI-11000] 2024-08-26 10:12:54 +02:00
Martin Artnik 6b5a5cddf8 Fix task activity permission checks [SCI-11000] 2024-08-26 09:48:10 +02:00
Martin Artnik a0d74b629c
Merge pull request #7811 from scinote-eln/features/repository-permissions-rework
Features/repository permissions rework
2024-08-22 10:43:27 +02:00
Martin Artnik e7b4fd0151
Merge pull request #7809 from artoscinote/ma_SCI_10988
Properly handle experiments with hidden tasks in navigator [SCI-10988]
2024-08-21 11:09:35 +02:00
ajugo b380a009d8
Merge pull request #7808 from rekonder/aj_SCI_10997
Fix inventory item counter on inventory page [SCI-10997]
2024-08-21 11:09:16 +02:00
Martin Artnik 531cdbf23c Properly handle experiments with hidden tasks in navigator [SCI-10988] 2024-08-21 11:06:02 +02:00
Andrej dd42485cd4 Fix inventory item counter on inventory page [SCI-10997] 2024-08-20 17:28:53 +02:00