Commit graph

2801 commits

Author SHA1 Message Date
Anton e8b952f4fd Revert "Revert "Improve breadcrumbs implementation [SCI-8087]""
This reverts commit 78d41d10a6.
2023-04-19 10:53:39 +02:00
aignatov-bio d7e8f0303f
Merge branch 'features/navigation-refactor-v2' into ai-sci-8016-left-navigation-refactor 2023-04-19 10:33:09 +02:00
G-Chubinidze 5eacd41ca5
Adding well plate table options to "insert step content" select menu [SCI-7931] (#5302)
* well plate implementation without nested dropdown

* Implement dropdown submenu [SCI-7931]

* minor code cleanup

---------

Co-authored-by: Giga Chubinidze <gchubinidze@unisens.ge>
Co-authored-by: Martin Artnik <martin@scinote.net>
2023-04-18 15:42:53 +02:00
sboursen-scinote b8b33fe480 Update configuration after protocol.io changed default page_id to 0 [SCI-8286] 2023-04-18 12:43:56 +02:00
aignatov-bio 54cbcb4657
Merge pull request #5317 from aignatov-bio/ai-sci-7926-add-new-buttons-tyle
Add tailwind [SCI-7926]
2023-04-18 11:53:02 +02:00
Anton bc2959dfb4 Add new button styles and tailwind [SCI-7926] 2023-04-18 11:36:12 +02:00
Anton 8202d2e817 Add disclaimer modal [SCI-7960] 2023-04-17 11:22:50 +02:00
Anton acd6413ca3 Fix navigation sidebar [SCI-8288] 2023-04-14 11:38:28 +02:00
aignatov-bio 134e7373c7
Merge pull request #5280 from sboursen-scinote/sb_SCI-8237-alternative-solution
Title for publishing template protocol draft must include next version value (Alt) [SCI-8237]
2023-04-14 10:37:51 +02:00
aignatov-bio cbd84b94b4
Merge pull request #5288 from aignatov-bio/ai-sci-8280-add-counters-logic-to-notifications
Add counters logic for notifications [SCI-8280]
2023-04-13 15:35:56 +02:00
Anton cb7f41e516 Add counters logic for notifications [SCI-8280] 2023-04-13 15:35:21 +02:00
ajugo e85f1f8bbd
Show error message for protocols templates with same name [SCI-8247] (#5266) 2023-04-13 15:34:36 +02:00
aignatov-bio 9466b119a1
Merge pull request #5297 from scinote-eln/features/navigation-refactor
Features/navigation refactor
2023-04-13 13:59:25 +02:00
artoscinote 447f9dc993
Merge pull request #5245 from G-Chubinidze/gc_SCI_8205
Wrong wording for access button [SCI-8205]
2023-04-12 14:40:55 +02:00
aignatov-bio 78d41d10a6
Revert "Improve breadcrumbs implementation [SCI-8087]" 2023-04-12 14:04:20 +02:00
artoscinote fa64c8bb5c
Merge pull request #5283 from sboursen-scinote/sb_SCI-8223
CSS: Protocol template list of smaller issues [SCI-8223]
2023-04-12 12:58:25 +02:00
sboursen-scinote b1914468c9 Add version number to protocol details [SCI-8237] 2023-04-11 15:00:21 +02:00
Martin Artnik 9455c0e393 Temporarily turn off uglifier 2023-04-11 13:27:20 +02:00
Soufiane 0f8918e9f6
Revision notes written in version modal are not seen/saved [SCI-8279] (#5272)
* Load latest protocol version comment in publish modal [SCI-8279]

* Check publish permission before updating the draft comment [SCI-8279]
2023-04-11 12:50:14 +02:00
Soufiane 5e321b761d
Enable support of files larger than 4GB in zip [SCI-8267] (#5278)
Update rubyzip gem to the latest version and enable support for large files [SCI-8267]
2023-04-11 11:36:27 +02:00
artoscinote 94b319f16d
Merge pull request #5277 from sboursen-scinote/sb_SCI-8286
Protocols.io search appending results at the end of the list [SCI-8286]
2023-04-11 11:02:47 +02:00
sboursen-scinote 6d984d8dfc Fix protocol.io search [SCI-8286]
- Reduce the number of displayed publications to 20 for speed
- Clear the search result each time a new key (search sentence) is used
2023-04-11 10:30:58 +02:00
artoscinote b3275feedb
Merge pull request #5276 from G-Chubinidze/gc_SCI_7633_v2
updated device table stylings
2023-04-11 10:18:59 +02:00
artoscinote 8a7667432c
Merge pull request #5234 from G-Chubinidze/gc_SCI_8211
Label '(Draft)' in front of the protocol template name [SCI-8211]
2023-04-11 10:14:17 +02:00
Giga Chubinidze 1d44eea8cf updated device table stylings 2023-04-10 23:57:43 +04:00
sboursen-scinote b66960f41b Fix load protocol template header wording [SCI-8223] 2023-04-07 17:42:00 +02:00
aignatov-bio 58c84634a6
Merge pull request #5238 from sboursen-scinote/sb_SCI-8087
Improve breadcrumbs implementation [SCI-8087]
2023-04-06 19:52:33 +02:00
Giga Chubinidze ceba49acb4 grant access new name, padding update on publish modal 2023-04-06 17:12:56 +04:00
Oleksii Kriuchykhin 60579465ab Refactor user_notifications controller, remove unused code [SCI-8207] 2023-04-06 14:57:00 +02:00
ajugo 3ad1d384ee
Raise character limit for rich text fields and reword limit text error [SCI-7959] (#5221) 2023-04-05 15:34:48 +02:00
Soufiane 4985c2eb88
Added Published on & Published by to Protocol details screen [SCI-8193] (#5239)
Added Published on & Published by to Protocol details screen [SCI-8193]
2023-04-05 15:08:31 +02:00
Soufiane 1a1956e163
Change wording for access management to cover project and templates (EDIT 2) [SCI-8231] (#5251)
* Use I18n [SCI-8231]

* Consolidate the message translations [SCI-8231]
2023-04-04 11:55:00 +02:00
ajugo 91c32e415f
Add missing translation for flash [SCI-8238] (#5243) 2023-04-03 14:37:48 +02:00
Anton 52aac69488 Add final version for left menu [SCI-8016] 2023-04-03 13:29:24 +02:00
sboursen-scinote 8ae354b180 Merge branch 'features/navigation-refactor' into sb_SCI-8087 2023-04-02 17:33:23 +02:00
Anton 0c76d7a9b1 Merge branch 'develop' into features/navigation-refactor 2023-03-31 20:31:30 +02:00
sboursen-scinote 852108df0b Change flash messages for protocol access permission [SCI-8231] 2023-03-31 18:45:32 +02:00
Giga Chubinidze 3fc2afde3c Label '(Draft)' in front of the protocol template name [SCI-8211] 2023-03-31 18:30:26 +04:00
Anton ec96fb134f Merge branch 'ai-sci-7926-add-tailwind-and-new-buttons-design' of github.com:aignatov-bio/scinote-web into ai-sci-7926-add-tailwind-and-new-buttons-design 2023-03-31 14:09:01 +02:00
sboursen-scinote 95797ab8dd Implement layout breadcrumbs for Inventories [SCI-8087] 2023-03-30 18:42:27 +02:00
Giga Chubinidze 57d951a690 Change title for publishing draft [SCI-8232] 2023-03-30 20:30:49 +04:00
ajugo e1cf9775fd
Add new activites for all team members [SCI-8224] (#5227) 2023-03-30 16:04:57 +02:00
Anton 07f4156f9b Add addons support to webpack [SCI-7926] 2023-03-30 14:22:42 +02:00
Anton ed1c4bcb69 Replace webpacker with jsbundling-rails [SCI-7926] 2023-03-30 13:39:57 +02:00
Anton babb46baa7 Update webpacker to version 5.4.4 [SCI-7926] 2023-03-28 14:00:28 +02:00
Martin Artnik 1f5fa19d80 Add missing translation [SCI-8131] 2023-03-27 15:26:59 +02:00
ajugo 26879f200d
Fix CSS for protocol versioning modal [SCI-8194] (#5197) 2023-03-27 13:28:00 +02:00
Anton 1177eaae5b Add general notifiacitons flyout [SCI-8017] 2023-03-25 17:34:26 +01:00
aignatov-bio d8083b84b6
Merge pull request #5184 from aignatov-bio/ai-sci-8185-css-fixes
Fix tables css [SCI-8185]
2023-03-24 13:14:38 +01:00
aignatov-bio 09a217baca
Merge pull request #5193 from aignatov-bio/ai-sci-8190-fix-protocol-screen-css
Protocol screen css fixes [SCI-8190]
2023-03-24 13:04:00 +01:00
Anton 0b560f5b05 Protocol screen css fixes [SCI-8190] 2023-03-24 12:01:47 +01:00
artoscinote 00191e41de
Merge pull request #5192 from scinote-eln/features/token-revocation
Features/token revocation
2023-03-24 11:13:38 +01:00
Anton 4edad3f41c Fix tables css [SCI-8185] 2023-03-23 13:05:37 +01:00
Anton 854fc1764b Refactor left/top navigation [SCI-8055] 2023-03-22 14:08:21 +01:00
ajugo fe37699ba5
Add switch for connected devices [SCI-8112] (#5179) 2023-03-22 12:15:01 +01:00
ajugo 8eb04c50c2
Add removing connected device [SCI-8146] (#5174) 2023-03-21 16:44:24 +01:00
artoscinote 397e4aeebe
Merge pull request #4935 from G-Chubinidze/gc_SCI_7848
user_my_modules_controller#index_old action updates [SCI-7848]
2023-03-21 11:41:38 +01:00
Giga Chubinidze 8e942379ff changed assignee to designated_users 2023-03-21 14:29:23 +04:00
Oleksii Kriuchykhin 7fff3e8f78 Merge branch 'hotfix/1.26.6.2' into develop 2023-03-20 15:36:49 +01:00
Oleksii Kriuchykhin b67691acb5 Merge branch 'develop' into features/protocol_versioning 2023-03-17 13:53:30 +01:00
G-Chubinidze 06eeb3b27f
FE manage devices (table view) + revoking the device [SCI-7633] (#4920)
* FE manage devices (table view) + revoking the device [SCI-7633]

* revocation code optimisation

* hound fixes

---------

Co-authored-by: Giga Chubinidze <gchubinidze@unisens.ge>
2023-03-17 13:44:41 +01:00
aignatov-bio 5844fce23e
Merge pull request #5156 from aignatov-bio/ai-sci-8154-cleanup-old-protocol-code
Clean old protocol code [SCI-8154]
2023-03-17 11:26:41 +01:00
Anton 248b6b6581 Remove additional code 2023-03-17 11:11:59 +01:00
Alex Kriuchykhin 4dd5cb5de4
Adapt global search for new protocol versioning [SCI-8080] (#5158) 2023-03-17 10:43:50 +01:00
Alex Kriuchykhin bd670bb177
Allow data attributes in html sanitization [SCI-8158] (#5159) 2023-03-16 18:17:18 +01:00
Anton da36b7268f Clean old protocol code [SCI-8154] 2023-03-16 14:37:19 +01:00
ajugo 7c287b3993
Reword project access permissions [SCI-8124] (#5146) 2023-03-15 13:53:43 +01:00
sboursen-scinote c6bb9850ea Merge feature/protocol_versioning into sb_SCI-8007 [SCI-8007] 2023-03-15 09:24:45 +01:00
Soufiane 1d396e57ab
Update of a Task Filters on a dashboard (Clear/Close function, Show results) [SCI-7607] (#4873)
* Change the position of the clear button and update the Apply button text [SCI-7607]

* Add a clos button in the header of the dropdown [SCI-7607]

* Fix scss style issue [SCI-7607]

* Change gap to margin-right [SCI-7607]
2023-03-14 12:53:27 +01:00
Alex Kriuchykhin d82470aa03
Improve handling and escaping of special characters in input fields [SCI-8125] (#5135) 2023-03-13 18:00:30 +01:00
Alex Kriuchykhin d285a0a9db
Preserve old protocol types for backward compatibility, fix protocol draft user permissions [SCI-8083] (#5123) 2023-03-13 09:55:53 +01:00
sboursen-scinote d2ceeb9662 Use I18n [SCI-8007] 2023-03-12 14:10:07 +01:00
Alex Kriuchykhin cb1c49762a
Revert "Protocol permissions - button display [SCI-8058]" (#5121) 2023-03-10 11:45:32 +01:00
sboursen-scinote 55ebb4817e Fix hound [SCI-8007] 2023-03-10 09:16:50 +01:00
Soufiane 9b444cd8fb
Merge pull request #5110 from sboursen-scinote/sb_SCI-8045
CSS bugs for "Protocol templates" [SCI-8045]
2023-03-09 16:30:46 +01:00
sboursen-scinote a419943e4e Merge 'protocol_versioning' into sb_SCI-8045 2023-03-09 16:29:40 +01:00
sboursen-scinote e314dd4f51 Use I18n [SCI-8045] 2023-03-09 16:07:24 +01:00
G-Chubinidze f6ee2e821c
Merge pull request #5107 from G-Chubinidze/gc_SCI_8058
Protocol permissions - button display [SCI-8058]
2023-03-09 19:02:42 +04:00
Anton ca5f61a0e2 Add all team members through access modal [SCI-8063] 2023-03-09 14:13:01 +01:00
Alex Kriuchykhin 87153b8899
Improve filtering of user supplied data in the input and text fields [SCI-8095] (#5106) 2023-03-09 11:38:47 +01:00
G-Chubinidze 32d1c2cf6d
Merge branch 'features/protocol_versioning' into gc_SCI_8058 2023-03-08 21:15:36 +04:00
Giga Chubinidze 553c644811 Protocol permissions - button display [SCI-8058] 2023-03-08 21:12:29 +04:00
artoscinote a503aa1a9f
Add create draft activity name [SCI-8093] 2023-03-08 10:25:11 +01:00
Martin Artnik e4e8997cc1 Add draft created activity [SCI-8093] 2023-03-07 14:45:52 +01:00
Soufiane f22f00f856
Merge pull request #5067 from sboursen-scinote/sb_SCI-8032
Old buttons at importing protocols.io protocol [SCI-8032]
2023-03-07 14:13:02 +01:00
aignatov-bio ce36a2565b
Merge pull request #5092 from aignatov-bio/ai-sci-8077-add-empty-state-for-protocol-actions-toolbar
Add empty state for protocol actions toolbar [SCI-8077]
2023-03-07 14:09:18 +01:00
Alex Kriuchykhin f8a4e7ee65
Update logic for linked protocol templates with task [SCI-7973] (#5058) 2023-03-07 13:03:01 +01:00
Soufiane d801677392
Merge branch 'develop' into sb_SCI-7562 2023-03-07 12:52:05 +01:00
Soufiane 1d80118393
Merge pull request #5035 from sboursen-scinote/sb_SCI-7996
Fix protocols repository table CSS [SCI-7996]
2023-03-07 12:50:10 +01:00
Martin Artnik 5e6f0fad83 Access modal translation amends [SCI-8060] 2023-03-07 12:14:02 +01:00
Anton ece09ee9a5 Add empty state for protocol actions toolbar [SCI-8077] 2023-03-07 11:44:03 +01:00
Anton ca76c78a23 Fix protocol creation error message [SCI-8003] 2023-03-06 19:31:45 +01:00
sboursen-scinote 34f324f7ca Update the sort component [SCI-8045] 2023-03-06 12:00:53 +01:00
aignatov-bio 47c59ecc6c
Fix protocol copy/save message [SCI-8064] (#5079) 2023-03-06 11:51:40 +01:00
sboursen-scinote 587606803b Update search placeholder [SCI-8045] 2023-03-06 09:28:21 +01:00
sboursen-scinote 443ee4350c Fix protocol repository sidebar on archived view [SCI-8030] 2023-03-03 14:11:40 +01:00
sboursen-scinote 515baa8de7 Update translations [SCI-8032] 2023-03-03 11:03:04 +01:00
ajugo 72cf844c3e
Fix protocol version modification info text [SCI-8061] (#5064) 2023-03-02 15:35:02 +01:00
ajugo 671e7dc2df
Remove double text in unlink/revert protocol modal [SCI-8052] (#5056) 2023-03-02 09:57:21 +01:00
Martin Artnik ac0e0ba853 Fix asset initializer [SCI-7974] 2023-03-01 15:31:22 +01:00
Soufiane 3760073e87
Merge branch 'features/protocol_versioning' into sb_SCI-7909 2023-02-28 15:37:35 +01:00
Soufiane 2aee34ce56
Merge pull request #4955 from sboursen-scinote/sb_SCI-7904
Protocol templates - delete all steps (tasks screen) [SCI-7904]
2023-02-28 15:33:33 +01:00
Soufiane 53f2bc3be0
Merge pull request #4977 from sboursen-scinote/sb_SCI-7910
Protocol templates - revert action and alert message [SCI-7910]
2023-02-28 15:33:05 +01:00
artoscinote fab7d9c3d6
Merge pull request #5038 from artoscinote/ma_SCI_7990
Fix protocol duplication in table [SCI-7990]
2023-02-28 14:28:08 +01:00
ajugo 96cf2f1d38
Update protocol templates update action on task [SCI-7903] (#5009)
* Update protocol templates update action on task [SCI-7903]

* Simplify logic for update from parent [SCI-7903]
2023-02-28 14:17:34 +01:00
sboursen-scinote 1c9d9d8082 Add a small refactor [SCI-7910] 2023-02-28 14:13:18 +01:00
Martin Artnik 219814ec06 Change protocol clone to support bulk in future [SCI-7990] 2023-02-28 13:11:49 +01:00
sboursen-scinote e29bdcb51f Revome uneeded I18n config [SCI-7910] 2023-02-28 12:04:29 +01:00
sboursen-scinote 66edffe53a Use I18n [SCI-7910] 2023-02-28 12:03:00 +01:00
sboursen-scinote e8cbc0364f Change the tanslation [SCI-7909] 2023-02-28 11:39:49 +01:00
artoscinote e88b84000b
Merge pull request #5021 from artoscinote/ma_SCI_7978
Protocol permission modal changes [SCI-7978]
2023-02-27 13:34:32 +01:00
ajugo 0328a32e09
Update import/export for protocol templates [SCI-7986] (#5032) 2023-02-27 13:22:01 +01:00
sboursen-scinote af48cede1f Update protocol repository default view styles [SCI-7996] 2023-02-27 09:58:28 +01:00
ajugo 58fdcc785f
Make supporting material variable [SCI-6593] (#5014) 2023-02-24 17:57:10 +01:00
ajugo 95d04d11d2
Fix validation for multiple parent protocols for drafts [SCI-7994] (#5020)
* Fix validation for multiple parent protocols for drafts [SCI-7994]

* Fix validation for drafts [SCI-7994]

* Fix validation for drafts [SCI-7994]
2023-02-24 17:56:51 +01:00
Anton 60cda9b6f2 Fix version number for draft [SCI-7989] 2023-02-24 15:32:10 +01:00
Martin Artnik c24b0fa5ab Refactor access modals [SCI-7978] 2023-02-23 14:57:38 +01:00
Martin Artnik b0fc97a549 Fix assignable for top level assignables [SCI-7978] 2023-02-22 15:37:39 +01:00
Anton 826cb162da Add save as draft action 2023-02-22 14:59:48 +01:00
aignatov-bio 5d3e6b7226
Merge pull request #5007 from aignatov-bio/ai-sci-7717-protocol-new-activities
Add new protocol activities [SCI-7717]
2023-02-22 10:48:20 +01:00
Anton f7d7113239 Add new protocol activities [SCI-7717] 2023-02-22 10:46:24 +01:00
ajugo 0be0aa7629
Implement filters for protocol template datatable [SCI-7605] (#4918)
Implement filters for protocol template datatable [SCI-7605]
2023-02-21 14:57:43 +01:00
Anton a95ca75362 Add new protocol modal [SCI-7810] 2023-02-21 14:15:53 +01:00
aignatov-bio ae607839c1
Merge pull request #5002 from aignatov-bio/ai-sci-7715-update-protocol-io-front-end
Update protocolsIo front-end [SCI-7715]
2023-02-21 14:06:42 +01:00
ajugo 166208f186
Update i flyouts of protocols (task screen) [SCI-7861] (#5003) 2023-02-21 13:44:26 +01:00
Anton c775a92914 Update protocolsIo front-end [SCI-7715] 2023-02-21 11:06:54 +01:00
artoscinote 8f8865c73c
Fix MarvinJS image toolbar issues [SCI-7934] (#4998) 2023-02-21 09:12:59 +01:00
ajugo 2c079cc918
Update protocol duplication [SCI-7900] (#4992) 2023-02-18 09:09:33 +01:00
artoscinote 6400745b0c
Merge pull request #4984 from artoscinote/ma_SCI_7937
Fix table of contents, add image download tooltip [SCI-7937]
2023-02-17 14:59:01 +01:00
Martin Artnik 43f6a8e66f Fix table of contents, add image download tooltip [SCI-7937] 2023-02-17 10:36:47 +01:00
ajugo 9a57071d7a
Update restore action for protocol templates [SCI-7634] (#4969)
* Update restore action for protocol templetes [SCI-7634]

* Move protocol table reload to methond [SCI-7634]
2023-02-16 18:03:11 +01:00
sboursen-scinote 0039edae66 Update the style of the revert protocol modal [SCI-7910] 2023-02-15 09:26:46 +01:00
Alex Kriuchykhin 7f8f723cbe
Fix handling of ISS in Azure configuration, fix linked accounts page [SCI-7923] (#4974) 2023-02-14 16:50:15 +01:00
sboursen-scinote 4b264db343 Update the text of the inlink protocol modal [SCI-7909] 2023-02-14 14:59:05 +01:00
ajugo cb332f163f
Update the Load protocol template to task modal [SCI-7591] (#4870)
* Update the Load protocol template to task modal [SCI-7591]

* Update the Load protocol template to task modal [SCI-7591]

* Load last protocol version from repository to task [SCI-7591]

* Fix find_by for load_table [SCI-7591]
2023-02-14 13:19:24 +01:00
Anton ea9d2d8291 Merge branch 'develop' into features/protocol_versioning 2023-02-14 11:07:58 +01:00
Martin Artnik 8f6d1f7872 Fix webpack if no addons are present [SCI-7916] 2023-02-14 10:43:55 +01:00
Anton dc5cfb9fc3 Add publish and delete action [SCI-7905] 2023-02-13 14:45:22 +01:00
Martin Artnik f880ea46ce Add connected device logging [SCI-7632] 2023-02-13 11:32:18 +01:00
Anton 743d901310 Add published view for protocol [SCI-7617] 2023-02-13 10:41:30 +01:00
Anton 3902310463 Update protocol view screen [SCI-7590] 2023-02-13 09:52:30 +01:00
sboursen-scinote 74773b773c Update the text of the delete all steps modal [SCI-7904] 2023-02-09 15:49:38 +01:00
Anton b55f68c0dc Update archive action for protocol templates [SCI-7898] 2023-02-09 14:10:07 +01:00
aignatov-bio 23e50cf710
Merge pull request #4882 from aignatov-bio/ai-sci-7608-update-archive-view-for-protoco-templates
Add archive view for protocols template [SCI-7608]
2023-02-09 11:40:47 +01:00
Anton 1a0b28c74e Add archive view for protocols template 2023-02-09 11:38:27 +01:00
aignatov-bio 15d1efa408
Merge pull request #4894 from okriuchykhin/ok_SCI_7718
Add permission for protocol draft management [SCI-7718]
2023-02-09 11:34:22 +01:00
artoscinote 77b4a557f1
Merge pull request #4881 from artoscinote/ma_SCI_7631
Throw error when authenticating with revoked tokens [SCI-7631]
2023-02-07 13:39:03 +01:00
aignatov-bio 193ff7bc46
Merge pull request #4891 from aignatov-bio/ai-sci-7520-implement-version-modals-interactions
Add manage actions to version modal [SCI-7520]
2023-02-07 13:38:33 +01:00
Giga Chubinidze 9e3073b11e step timestamp changes 2023-02-07 15:53:58 +04:00
ajugo 9caa5be4c0
Updated protocol actions select menu in task [SCI-7820] (#4939) 2023-02-07 10:39:49 +01:00