Commit graph

1283 commits

Author SHA1 Message Date
Urban Rotnik
d35f7119b7 Moved delete action to service 2019-12-10 14:29:37 +01:00
Urban Rotnik
5345cf0342 Updated date and time comparison 2019-12-10 14:29:36 +01:00
Urban Rotnik
5055490a23 Refactor asset value methods 2019-12-10 14:29:36 +01:00
Urban Rotnik
82b93bf9a4 Fix failing tests 2019-12-10 14:29:35 +01:00
Urban Rotnik
b68aadf506 Update params nesting 2019-12-10 14:29:35 +01:00
Urban Rotnik
0c990ef8cf Add functions for creating new cells with values 2019-12-10 14:29:34 +01:00
Urban Rotnik
5b710241e1 Add delete condition to update_data method on CellValues 2019-12-10 14:29:33 +01:00
Urban Rotnik
79a50860b6 Add methods update_data, data_changed, formatted for all types off ColumnValues 2019-12-10 14:29:29 +01:00
Mojca Lorber
a3a5b21951 small fixes 2019-12-10 12:02:08 +01:00
mlorb
1122fe2d2f
Merge branch 'features/new-column-types' into ml-sci-4029 2019-12-10 10:54:41 +01:00
Alex Kriuchykhin
2e15548680
Merge pull request #2245 from okriuchykhin/ok_SCI_4107
Fix TinyMCE images and avatars for export all [SCI-4107]
2019-12-10 10:35:09 +01:00
Urban Rotnik
e764e856d8 Fix syntax error 2019-12-10 09:40:40 +01:00
Mojca Lorber
8503dd7007 Add numeric repository column type 2019-12-09 16:38:21 +01:00
Alex Kriuchykhin
7a97f813b2
Merge pull request #2252 from biosistemika/SCI-4109-export-with-assigned-item-bugfix
SCI-4109 fix the file copying
2019-12-09 16:04:43 +01:00
aignatov-bio
09079fbcda Fix naming and tests 2019-12-09 13:48:36 +01:00
aignatov-bio
643abc3fd7 Fixes tests 2019-12-09 13:48:36 +01:00
aignatov-bio
d8676596f1 Add checklists column type 2019-12-09 13:48:36 +01:00
Urban Rotnik
eca0c84bbd Fix tests 2019-12-06 14:20:37 +01:00
Urban Rotnik
e934e08c17 Implement STI for DateTimeValue types 2019-12-06 12:50:19 +01:00
Oleksii Kriuchykhin
7a89cae56f Fix TinyMCE images and avatars for export all [SCI-4107] 2019-12-05 13:27:17 +01:00
Oleksii Kriuchykhin
03667f619f Merge branch 'release-1-17-7' into develop 2019-12-05 13:03:39 +01:00
aignatov-bio
43ff9f6f26 Fix experiment copy 2019-12-02 15:34:42 +01:00
Alex Kriuchykhin
fbf1a5b6e2
Merge pull request #2239 from okriuchykhin/ok_SCI_4098
Refactor Azure configuration  and connected accounts [SCI-4098]
2019-11-29 11:30:33 +01:00
Urban Rotnik
5f2407e3fb Add view renders for DateTime column types 2019-11-29 10:50:14 +01:00
Urban Rotnik
cb0fe049f0 Remove range method from model 2019-11-29 10:19:55 +01:00
Urban Rotnik
5ae29d549e Add manage modal for DateTime values 2019-11-29 10:19:55 +01:00
Urban Rotnik
f39af1916f Split DateTime and DateTimeRange column types, rename DateType table 2019-11-29 10:19:16 +01:00
Urban Rotnik
f30664a7b3 Add inverse_of option 2019-11-29 10:19:15 +01:00
Urban Rotnik
aee806edaa Add methods for repository_date_time_value 2019-11-29 10:19:14 +01:00
Urban Rotnik
2a20ad68a3 Add range column to RepositoryColumn 2019-11-29 10:19:14 +01:00
Urban Rotnik
b591346a3f Add DateTime type column 2019-11-29 10:19:13 +01:00
Urban Rotnik
1e8261ac2a Update InventoryColumns API for new Status Type 2019-11-29 10:19:07 +01:00
Oleksii Kriuchykhin
73be1181ac Fix failing tests for repository states [SCI-4070] 2019-11-29 10:19:05 +01:00
Oleksii Kriuchykhin
e8fdfe7111 Implement datatables renderer for status data type [SCI-4032] 2019-11-29 10:19:04 +01:00
Urban Rotnik
1720623665 Refactor RepositoryListColumn controller 2019-11-29 10:17:50 +01:00
Urban Rotnik
14b43d516e Add UpdateStatusColumnService service 2019-11-29 10:16:45 +01:00
Urban Rotnik
bbb8c46fe2 Add CreateStatusColumnService service 2019-11-29 10:16:44 +01:00
Urban Rotnik
c00a837105 Add models for RepositoryStatus column type 2019-11-29 10:16:43 +01:00
Oleksii Kriuchykhin
6b20a10473 Refactor Azure configuration [SCI-4098] 2019-11-26 15:09:40 +01:00
Miha Mencin
b968de96c7
Merge pull request #2232 from biosistemika/SCI-4109-export-with-assigned-item-bugfix
SCI-4109 fix the file copying
2019-11-25 17:32:34 +01:00
Miha Mencin
48fc7708f8 SCI-4109 fix the file copying 2019-11-25 13:38:16 +01:00
Urban Rotnik
0dc1daa7c6 Add gem Down, File size validation before and during download 2019-11-18 14:28:19 +01:00
Oleksii Kriuchykhin
b2862b6c9e Remove Paperclip DB columns and fix experiment templates [SCI-3988] 2019-11-18 14:16:28 +01:00
Anton Ignatov
7117b767f4 Fix commnets to PR 2019-11-18 13:59:54 +01:00
Anton Ignatov
fc70ce24f8 Refactor side filters for global activities 2019-11-18 13:59:54 +01:00
Anton Ignatov
7b855f54ac Finish main part of selectors 2019-11-18 13:59:54 +01:00
aignatov-bio
b1f9e7f1ca Fix global activities jsonb field [SCI-3830] (#2030)
* Fix global activities jsonb field

* Fix tests
2019-11-18 13:59:54 +01:00
Urban Rotnik
dcfca76602 Update method 'update_canvas' to work with new DB constraint 2019-11-18 11:11:41 +01:00
Urban Rotnik
b8bf7bbd9b Rename validation 2019-11-18 11:11:40 +01:00
Urban Rotnik
43e3763ec8 Update x, y, experiment unqiue validation
[SCI-3887]
2019-11-18 11:11:40 +01:00
Urban Rotnik
060125a1c4 Add file size validation 2019-11-18 11:11:38 +01:00
Urban Rotnik
24033bec7a Add API endpoint for Task creation 2019-11-18 11:11:37 +01:00
Urban Rotnik
7802d5ee8b Add uniq validation for x and y position scoped to experiment 2019-11-18 11:11:36 +01:00
aignatov-bio
3eb6f5695b
Merge pull request #2207 from aignatov-bio/mlorb-ml-sci-4004
Add auto-save feature to text fields [SCI-4004]
2019-11-18 09:11:10 +01:00
aignatov-bio
b979435b35
Merge pull request #2199 from aignatov-bio/ai-sci-4055-fix-eln-export-for-files-without-extension
Fix eln export for file without extension [SCI-4055]
2019-11-15 14:16:07 +01:00
aignatov-bio
a9690482d1 Add autosave feature to text fields 2019-11-12 11:26:18 +01:00
aignatov-bio
0c5ce90895 Fix eln export for file without extension 2019-11-06 09:53:44 +01:00
Oleksii Kriuchykhin
b2eda231a0 Fix TinyMCE images in protocol clonning [SCI-4053] 2019-11-05 18:13:44 +01:00
aignatov-bio
717b70f75b
Merge pull request #2171 from aignatov-bio/ai-sci-3995-fix-avatar-comments-and-activties
Fix avatars in comments and activities [SCI-3995]
2019-10-29 14:11:39 +01:00
Urban Rotnik
169a381629
Merge pull request #2170 from urbanrotnik/ur-sci-4008-rte-image-download
Fix for downloading image [SCI-4008]
2019-10-22 15:12:11 +02:00
Urban Rotnik
a7d351dc38 Add file size check 2019-10-22 14:13:22 +02:00
Alex Kriuchykhin
5524598d53
Merge pull request #2172 from biosistemika/release_1_17_3
Merge release 1.17.3 to master
2019-10-22 12:45:02 +02:00
aignatov-bio
9950a23188 Replace base64 avatars with url 2019-10-22 12:27:13 +02:00
Urban Rotnik
0119533e75 Fix for file generation 2019-10-22 11:02:59 +02:00
Oleksii Kriuchykhin
53402c9ce1 Fix images in reports, impove speed of report generation [SCI-3990][SCI-3993] 2019-10-17 13:30:14 +02:00
Oleksii Kriuchykhin
8f52b362d6 Fix file handling in protocol import/copying [SCI-3935][SCI-3926][SCI-3934] 2019-10-11 11:46:51 +02:00
Miha Mencin
8e98c82bbf SCI-3979 removing accessors 2019-10-09 15:49:49 +02:00
Miha Mencin
6d71036d07
Remove paperclip attribute accessors 2019-10-09 10:20:00 +02:00
Miha Mencin
78fd5df0f6
Revert "Fix report in academia" 2019-10-09 10:16:39 +02:00
Miha Mencin
37e6604f8b
Merge pull request #2136 from biosistemika/SCI-3975-team-export
Sci 3975 team export
2019-10-08 21:47:08 +02:00
Miha Mencin
f12c29bd2a fixing import 2019-10-08 21:40:44 +02:00
aignatov-bio
5eed152403
Revert "Force save office file" 2019-10-08 21:34:16 +02:00
aignatov-bio
0d88466894
Merge pull request #2139 from aignatov-bio/ai-sci-fix-office-save
Force save office file
2019-10-08 21:11:33 +02:00
aignatov-bio
236ce30254 Force save office file 2019-10-08 21:10:18 +02:00
aignatov-bio
4a5db36c07
Merge pull request #2138 from aignatov-bio/ai-sci-fix-report-in-academia
Fix report in academia
2019-10-08 20:19:48 +02:00
aignatov-bio
5d80c51996 Fix report in academia 2019-10-08 20:18:51 +02:00
Oleksii Kriuchykhin
3d9c2282f3 Implement JPEG quality extraction for ActiveStorage [SCI-3959] 2019-10-08 10:42:55 +02:00
Alex Kriuchykhin
39a2669eef
Merge pull request #2129 from okriuchykhin/ok_SCI_3950
Improve missing files handling when clonning TinyMceAsset [SCI-3950]
2019-10-07 09:18:45 +02:00
Oleksii Kriuchykhin
a2d70afeca Improve missing files handling when clonning TinyMceAsset [SCI-3950] 2019-10-04 15:59:22 +02:00
Alex Kriuchykhin
076d61d4d0
Merge pull request #2116 from okriuchykhin/ok_SCI_3908
Remove Paperclip from the codebase [SCI-3908]
2019-10-04 14:45:42 +02:00
Oleksii Kriuchykhin
bab228e1df Skip missing files when clonning TinyMceAsset [SCI-3950] 2019-10-03 15:43:39 +02:00
Oleksii Kriuchykhin
260fcd6e89 Remove Paperclip from codebase [SCI-3908] 2019-10-02 19:45:14 +02:00
Oleksii Kriuchykhin
efe5d8a6ea Remove the deprecated foreign keys from TinyMceAsset [SCI-3839] 2019-10-01 15:49:37 +02:00
Oleksii Kriuchykhin
46bcc0e78e Fix cloning of TinyMCE images in protocol description [SCI-3935][SCI-3926][SCI-3934] 2019-10-01 13:38:09 +02:00
Oleksii Kriuchykhin
584f2d07c0 Fix file handling in protocol import/copying [SCI-3935][SCI-3926][SCI-3934] 2019-10-01 13:06:01 +02:00
Anton Ignatov
33497d11a3 Merge branch 'activestorage_migration' 2019-10-01 10:36:05 +02:00
Jure Grabnar
0a3389f310 Fix operator for removing the lock on asset 2019-09-30 08:46:16 +02:00
Alex Kriuchykhin
53caaf647b
Merge pull request #2080 from okriuchykhin/ok_SCI_3891
Move file preview generation to delayed job [SCI-3891]
2019-09-27 10:50:21 +02:00
Miha Mencin
0e75ea2e3e
Merge pull request #2096 from aignatov-bio/ai-sci-3932-fix-tiny-mce-render-in-report
Fix tinymce assets render in report [SCI-3932]
2019-09-27 10:48:10 +02:00
Anton Ignatov
40a8c6a1cc Markup fix 2019-09-26 16:29:26 +02:00
Anton Ignatov
1f02fb4bc7 Fix tinymce assets render in report 2019-09-26 16:27:22 +02:00
Jure Grabnar
668f902570 Fix export all with active storage
Close SCI-3924
2019-09-26 16:01:30 +02:00
Anton Ignatov
305e9dc109 Fix error handling and rubocop error 2019-09-25 13:45:34 +02:00
Jure Grabnar
5cb900370a Change/fix asset locking mechanism
Close SCI-3870
2019-09-25 11:07:53 +02:00
Oleksii Kriuchykhin
aabeeec95a Move file preview generation to delayed job [SCI-3891] 2019-09-23 21:07:03 +02:00
Anton Ignatov
646107a35b Fix error on task copy 2019-09-23 16:33:57 +02:00
Alex Kriuchykhin
29ffe05442
Merge pull request #1964 from okriuchykhin/ok_SCI_3643
Add text extraction from MarvinJS for search [SCI-3643]
2019-09-18 16:22:11 +02:00
Anton Ignatov
69eb8681bd Error handling, when image unavaliable for base64 2019-09-18 15:11:51 +02:00
Oleksii Kriuchykhin
3509543e7b Merge branch 'master' into ok_SCI_3881 2019-09-16 11:56:49 +02:00
Oleksii Kriuchykhin
c068901b00 Upgrade Rails to 6.0 [SCI-3745] 2019-09-12 17:24:08 +02:00
aignatov-bio
a3b2c7d5fe
Fix report image issues [SCI-3772] (#1983)
* Fix report image issues

* Small fixes
2019-09-12 09:02:45 +02:00
Alex Kriuchykhin
59a85d8181
Merge pull request #2004 from okriuchykhin/ok_SCI_3778
Fix new office file creation [SCI-3778]
2019-09-04 15:40:34 +02:00
Oleksii Kriuchykhin
267c53c2d2 Refactor inventory sharing logic [SCI-3803] 2019-08-29 17:21:49 +02:00
Miha Mencin
9e9e698778 SCI-3806 Add an icon indicating shared status to dropdown 2019-08-26 09:14:37 +02:00
aignatov-bio
0810699770
Update shared inventory permissions [SCI-3802] (#2009)
* Update shared inventory permissions

* Fix tests and simplify condition for placeholder
2019-08-23 10:57:02 +02:00
Oleksii Kriuchykhin
3918c893db Fix new office file creation [SCI-3778] 2019-08-21 13:26:11 +02:00
aignatov-bio
f94b8165dc
Fix marvinjs edit button and icon (#1985) 2019-08-21 11:15:57 +02:00
Mojca Lorber
530d09df64 add i-shared inventory icon 2019-08-19 15:43:55 +02:00
aignatov-bio
d741e52427
Fix global search for inventories (#1988) 2019-08-19 09:23:59 +02:00
Urban Rotnik
89f289660b Add share_with_all feature to service, add new activities 2019-08-14 11:03:15 +02:00
Urban Rotnik
0ce331227c Update permission and model to share repository over all teams 2019-08-13 14:07:24 +02:00
aignatov-bio
737f9e572c
Replace marvinJS logo and fix some merge issues [SCI-3731] (#1976)
* Replace marvinJS logo and fix some merge issues

* Fix tests
2019-08-13 11:04:19 +02:00
Urban Rotnik
dc4751e49a Update scope 'accessible_by_teams' and fix load_vars method in controllers 2019-08-12 10:55:30 +02:00
Oleksii Kriuchykhin
32054c5516 Handle situation for assets without blob in list sorting [SCI-3757] 2019-08-09 15:17:19 +02:00
Oleksii Kriuchykhin
c352a73d79 ActiveStorage fixies after latest master merge [SCI-3757] 2019-08-09 14:56:00 +02:00
Urban Rotnik
786716974b Add validation for team on TeamRepository 2019-08-09 14:15:50 +02:00
Urban Rotnik
32783576c1 Add controller action 'multiple_update'
Add controller action, add update permission activity, add JS for handling ajax req
2019-08-09 14:15:50 +02:00
Mojca Lorber
0e5afa6048 Small refactor 2019-08-09 14:13:02 +02:00
Mojca Lorber
7d4941015f Update global search, so it will be able to search through shared inventories 2019-08-09 14:13:01 +02:00
Mojca Lorber
7e9be932f3 Make scope for repositories accessible by teams and simplify read permission 2019-08-09 14:13:00 +02:00
Mojca Lorber
cac7dab440 Show shared inventories in left navigation and fix read repository permission 2019-08-09 14:13:00 +02:00
Urban Rotnik
1a77702fa7 Add uniq index for Repository and Team in TeamRepositories 2019-08-09 14:13:00 +02:00
Urban Rotnik
077369d960 Update permissions for Repositories 2019-08-09 14:12:59 +02:00
Urban Rotnik
f569411bc7 Add TeamRepository model 2019-08-09 14:12:59 +02:00
aignatov-bio
6e5f078dea
Add activities for marvinJS [SCI-3630] (#1950)
* Add marvinJs activities to step and results

* Add activities for TinyMCE marvinJS assets

* Fix markup
2019-08-09 09:47:07 +02:00
Oleksii Kriuchykhin
973efa55e1 Merge branch 'master' into ok_SCI_3678 2019-08-08 11:17:07 +02:00
Anton Ignatov
e2e876b2a3 Merge branch 'activestorage_migration' into ai-sci-3728-fix-active-storage-tests 2019-08-05 13:51:04 +02:00
aignatov-bio
f0b7771e19
Merge pull request #1943 from aignatov-bio/ai-sci-3629-add-metadata-to-protocol-repository-import-export
Fix protocol copy, add metadata to assets [SCI-3629]
2019-08-05 12:55:16 +02:00
Anton Ignatov
feadd940f7 Fix duplicate for TinyMCE model 2019-08-05 11:33:49 +02:00
Anton Ignatov
24da016465 Reuse duplicate file method 2019-08-05 11:30:36 +02:00
Oleksii Kriuchykhin
a2fe4bee94 Add text extraction from MarvinJS for search [SCI-3643] 2019-08-02 15:17:28 +02:00
Anton Ignatov
7e379d4e0d Fix download file 2019-07-29 10:24:31 +02:00
Anton Ignatov
f35f4886a3 Fix markup 2019-07-29 10:18:34 +02:00
Anton Ignatov
a4b2825258 Fix tests for active storage 2019-07-26 15:58:51 +02:00
Anton Ignatov
618f0cc334 Fix tests for services 2019-07-26 14:16:44 +02:00
Anton Ignatov
84fe10df47 Fix tests for models and tema import/export 2019-07-26 12:40:36 +02:00
Anton Ignatov
3b7f715e0b Merge branch 'activestorage_migration' into features/marvinjs-integration 2019-07-22 13:09:17 +02:00
Anton Ignatov
b762ae6a90 Copy protocol assets through tempfile 2019-07-19 15:23:34 +02:00
aignatov-bio
4fe0227d8c
Add metadata for .eln assets (#1942) 2019-07-19 10:53:33 +02:00
aignatov-bio
2fae7d8208
Fix issue in report (#1941) 2019-07-19 10:37:44 +02:00
Anton Ignatov
b5a35f583a Fix protocol copy, add metadata to assets 2019-07-18 15:39:08 +02:00
Anton Ignatov
1e8663548e Add MarvinJS assets to TinyMCE 2019-07-16 13:40:54 +02:00
Anton Ignatov
3339c1fbbf Add MarvinJS to Result and TinyMce MarvinJS refactor 2019-07-15 17:17:14 +02:00
Anton Ignatov
ba1d6d45ca Fix merging issues 2019-07-12 15:47:15 +02:00
Anton Ignatov
ffd415d409 Inital refactor for Assets model 2019-07-12 15:02:06 +02:00
Anton Ignatov
7831b0a089 Merge branch 'activestorage_migration' into features/marvinjs-integration 2019-07-12 15:00:07 +02:00
Anton Ignatov
57a273d5d0 Merge branch 'activestorage_migration' into features/marvinjs-integration 2019-07-12 11:34:41 +02:00
Oleksii Kriuchykhin
64b7a5646a Implement custom document file previewer [SCI-3677] 2019-07-10 14:37:23 +02:00
Oleksii Kriuchykhin
a1941a21dc Futher refactoring of old Paperclip methods [SCI-3539] 2019-07-09 10:28:15 +02:00
Miha Mencin
ab9b7a7429
Merge pull request #1902 from biosistemika/release-1.16.6
Merge 'release-1.16.6' into 'master'
2019-07-08 12:49:40 +02:00
Alex Kriuchykhin
82708f0124
Merge pull request #1891 from okriuchykhin/ok_SCI_3654
Fix project page view saving [SCI-3654]
2019-07-08 11:46:54 +02:00
Oleksii Kriuchykhin
9d926dc956 Refactor TinyMce assets, user avatars, zip files [SCI-3539] 2019-07-05 16:56:05 +02:00
aignatov-bio
88dc2dcdd0
Hot fix for TinyMCE asset permission check (#1896)
* Hot fix for TimyMCE asset permission check
2019-07-04 15:59:11 +02:00
Oleksii Kriuchykhin
c0c8e0e1a3 Refactor Experiment workflow images [SCI-3539] 2019-07-04 09:33:12 +02:00
Jure Grabnar
20134c9f8a
Features/protocolsio integration (#1893)
Features/protocolsio integration
2019-07-03 17:32:20 +02:00
aignatov-bio
d147e8260d
Fix issue with moving protocol in repository (#1887) 2019-07-03 15:35:37 +02:00
Oleksii Kriuchykhin
e16cb513e1 Fix project page view saving [SCI-3654] 2019-07-03 15:34:16 +02:00
Oleksii Kriuchykhin
4ea6b56582 Fix Step and Result file previews [SCI-3539] 2019-07-01 23:30:20 +02:00
Anton Ignatov
1f40fa69fc Merge branch 'features/marvinjs-integration' of https://github.com/biosistemika/scinote-web into features/marvinjs-integration 2019-07-01 11:51:27 +02:00
aignatov-bio
a08d93376c
Add promo modal when MarvinJS disabled (#1872) 2019-07-01 11:51:13 +02:00
Anton Ignatov
c9ae9f056e Merge branch 'okriuchykhin-ok_SCI_3539' into features/marvinjs-integration 2019-07-01 10:44:29 +02:00
aignatov-bio
2793777463
Features/docx report (#1873)
* Initial setup for docx report

* Add render for project, experiment, my_module

* Implement converter for RTE fields

* Add all report elements

* fix markup

* Change headers, remove empty blocks, refactored repository draw

* Add smart annotations support

* Fix justify fields

* Prepare for addons integration

* Fix markup

* Add comments to GemFile

* Fix TinyMCE error

* Change UI for new report download selector

* Fix file error in inventory cell for docx

* Fix i18n object for header
2019-07-01 10:14:16 +02:00
Anton Ignatov
390002f40f Merge branch 'ok_SCI_3539' of https://github.com/okriuchykhin/scinote-web into okriuchykhin-ok_SCI_3539 2019-07-01 10:12:26 +02:00
Oleksii Kriuchykhin
5acb16d43e Update Asset helper methods [SCI-3539] 2019-06-28 08:17:09 +02:00
Oleksii Kriuchykhin
ba2daede0b Add migration scripts [SCI-3539] 2019-06-24 15:17:42 +02:00
Anton Ignatov
7e5c39d3e4 Merge branch 'master' into features/marvinjs-integration 2019-06-21 14:51:45 +02:00
Alex Kriuchykhin
db7c6435b3
Merge pull request #1851 from okriuchykhin/ok_SCI_3436
Implement saving of attachments ordering on steps [SCI-3436]
2019-06-20 11:31:15 +02:00
Oleksii Kriuchykhin
f2b617ac12 Fix code formatting [SCI-3436] 2019-06-19 14:23:12 +02:00
Oleksii Kriuchykhin
ae1a63037b Raise an exception if required methods for ViewableModel are not implemented [SCI-3436] 2019-06-19 14:17:17 +02:00
aignatov-bio
9653f16196
Convert image to base64 in PDF reports [SCI-3557] (#1835)
* Convert image to base64 in PDF reports

* Fix typo error
2019-06-19 13:57:04 +02:00
Urban Rotnik
807104035c Add StepBuilder, TableBuilder, AssetBuilder for PIO, normalized updated 2019-06-17 12:24:09 +02:00
aignatov-bio
68937dd192
Fix RTE import for protocol repository (#1833) 2019-06-14 16:20:27 +02:00
aignatov-bio
7a3eedf461
Adding missing avatars to comments (#1838) 2019-06-14 16:20:13 +02:00
aignatov-bio
52a2f5cd0e
Add recent protocols dropdown to task page [SCI-3417] (#1800)
* Add recent protocols dropdown to task page
2019-06-13 15:47:29 +02:00
Oleksii Kriuchykhin
097639e71e Fix view state validation [SCI-3436] 2019-06-13 14:28:46 +02:00
Alex Kriuchykhin
599274eb13
Merge pull request #1830 from okriuchykhin/ok_SCI_3528
Make repositories more extendable [SCI-3528]
2019-06-13 09:45:18 +02:00
Oleksii Kriuchykhin
6e1a7a3392 Implement saving of attachments ordering on steps [SCI-3436] 2019-06-11 10:08:33 +02:00
Jure Grabnar
bbfe2b9c89
Merge pull request #1798 from biosistemika/jg_sci_3145_thumbnail_preview
File preview on new attachments layout [SCI-3145]
2019-06-10 17:59:12 +02:00
Jure Grabnar
56949db9da Move extract_image_quality to before_post_process 2019-06-10 17:48:00 +02:00
Jure Grabnar
c2d615ab48 Remove image quality preprocessor 2019-06-10 15:10:07 +02:00
Urban Rotnik
bbe0062bfd Small fixes for factories 2019-06-10 12:24:05 +02:00
Urban Rotnik
965b7eb58b Add missing factories 2019-06-10 12:24:04 +02:00
Urban Rotnik
f19eeba8dc Add factory valid check for User's associations 2019-06-10 12:24:04 +02:00
Urban Rotnik
ba340f7bee Add valid factory check for Table, Tag, Team 2019-06-10 12:24:03 +02:00
Urban Rotnik
9348886fb1 Minior changes in SystemNotifications tests 2019-06-10 12:24:03 +02:00
Urban Rotnik
15cbd8864c Add valid factory check to Steps models 2019-06-10 12:24:03 +02:00
Urban Rotnik
1e60102a7d Add valid factory check for Sample(s) models 2019-06-10 12:24:02 +02:00
Urban Rotnik
c66aa29227 Add valid factory check for Result(s) models 2019-06-10 12:24:02 +02:00
Urban Rotnik
3adf2bb736 Add factories and validation tests for repositories and related models
Repositories, cells, columns, values (date, text, asset, list), rows, items
2019-06-10 12:24:02 +02:00
Urban Rotnik
a7558d83be Add valid factory check for Project, MyModules, notification, protocol 2019-06-10 12:24:01 +02:00
Urban Rotnik
3348b81b14 Checklist, checklist_item, activity, experiment spec and factories updated 2019-06-10 12:24:01 +02:00
Urban Rotnik
6321c0f5c0 Assets spec and factories updated 2019-06-10 12:24:01 +02:00
Oleksii Kriuchykhin
8920d38a02 Make repositories more extendable [SCI-3528] 2019-06-06 17:28:59 +02:00
Oleksii Kriuchykhin
e543a849d4 Add document file preview generation with LibreOffice [SCI-3145] 2019-06-05 14:52:30 +02:00
Anton Ignatov
c9a29b12ba Merge branch 'master' into features/marvinjs-integration 2019-05-31 10:27:14 +02:00
aignatov-bio
0b3b6d593b
Small style fixes [SCI-3498] (#1799)
* Adding error, if TinyMCE asset not in text, when we copy anything

* Small style fixes
2019-05-27 16:27:27 +02:00
Luka Murn
d7fe23c6ce
Merge pull request #1796 from Ducz0r/lm-sci-3494
Fix the user.activities association so it works [SCI-3494]
2019-05-24 14:21:42 +02:00
Luka Murn
3a2bf2ce8a
Merge pull request #1780 from Ducz0r/lm-perform-wopi-checks-on-startup
Add a startup check for WOPI_ENABLED == true variables
2019-05-22 16:56:55 +02:00
aignatov-bio
0f86ebf173
Adding error, if TinyMCE asset not in text, when we copy anything [SCI-3495] (#1797)
* Adding error, if TinyMCE asset not in text, when we copy anything
2019-05-22 16:13:40 +02:00
Luka Murn
8b116d9de7 Fix the user.activities association so it works
Closes SCI-3494.
2019-05-22 15:42:50 +02:00
Oleksii Kriuchykhin
d3f29d5d72 Add type column to zip_exports for STI [SCI-3368] 2019-05-20 16:35:24 +02:00
aignatov-bio
b22dba7f05
Add delay job for handling unknown tinyMCE images (#1781)
* Add delay job for handling unknown tinyMCE images
2019-05-20 12:44:16 +02:00
Luka Murn
4136aa0575 Add a startup check for WOPI_ENABLED == true variables 2019-05-18 10:22:53 +02:00
Luka Murn
8aa702a4bf Fix bug with external TinyMCE assets 2019-05-16 13:33:04 +02:00
Anton Ignatov
259b75a6ba Merge branch 'master' into features/marvinjs-integration 2019-05-16 09:28:48 +02:00
aignatov-bio
980d86824f
Fix updating process for old tinyMCE tags (#1772)
* Fix update old tinyMCE for deleted objects

* Add error handling
2019-05-15 16:11:48 +02:00
aignatov-bio
f1f04adeb2
Fix placeholder in protocol description [SCI-3454] (#1769)
* Fix placeholder in protocol description

* Change task tags text
2019-05-15 14:13:13 +02:00
Miha Mencin
13d126bc39
Merge pull request #1761 from mlorb/ml-sci-3456
Fix broken global activities team filter [SCI-3456]
2019-05-14 16:36:44 +02:00
aignatov-bio
1555daa0c6
Fix non associated tinyMCE images (#1762)
* Fix non assosiated tinyMCE images
2019-05-14 15:01:57 +02:00
Mojca Lorber
54f735551c Fix broken global activities team filter 2019-05-14 13:50:10 +02:00
Oleksii Kriuchykhin
65fb4b1372 Fix processing_image_url for S3 storage [SCI-3381] 2019-05-14 12:53:35 +02:00
Luka Murn
bd9ffe4bd2 Refactor WOPI filename length validation onto the model 2019-05-13 15:41:39 +02:00
Anton Ignatov
652fba0e23 Merge branch 'master-with-note-section' 2019-05-13 11:08:11 +02:00
aignatov-bio
d3aa6371cd
Fix report saving [SCI-3443] (#1753)
* Fix report saving

* Fix the report saving by using the reports' structures

* Remove uneccesary yarn.lock (mistake)
2019-05-13 10:55:08 +02:00
aignatov-bio
da5b24ef57
Fix attachment appearence after update (#1745) 2019-05-13 10:54:16 +02:00
aignatov-bio
0b194eb3b1
Revert "Fix report saving (#1748)" (#1752)
This reverts commit 3db6129808.
2019-05-13 09:09:36 +02:00
aignatov-bio
3db6129808
Fix report saving (#1748) 2019-05-13 08:58:47 +02:00
Anton Ignatov
e5b4adcc25 Merge branch 'master-with-note-section' into features/marvinjs-integration 2019-05-11 20:51:01 +02:00
aignatov-bio
bbf54de9c7
Merge pull request #1736 from aignatov-bio/ai-sci-3423-add-old-tinymce-support
Add old tinymce image support [SCI-3423]
2019-05-10 15:27:42 +02:00
Alex Kriuchykhin
2a7f70929a
Merge pull request #1717 from okriuchykhin/ok_SCI_3368
Improve clean up of Export All files [SCI-3368]
2019-05-09 13:37:56 +02:00
Oleksii Kriuchykhin
40550f92c9 Improve HTML data escaping in JSON endpoints [SCI-3403] 2019-05-08 17:38:24 +02:00
Anton Ignatov
995408e7fc Fix protocol update error, rollback bootstrap gems and fix step name 2019-05-08 17:18:19 +02:00
Anton Ignatov
bee87f51ba Fix tests 2019-05-08 15:22:06 +02:00
Anton Ignatov
b5271bdd2c Add remote api support 2019-05-08 15:00:36 +02:00
Anton Ignatov
5a5101410c Fix markup 2019-05-08 14:35:28 +02:00
Anton Ignatov
b2063d3018 Fix markup 2019-05-08 14:30:33 +02:00
Anton Ignatov
f201c5440b Add check for old tinymce for report and reassign process 2019-05-08 14:29:25 +02:00
Anton Ignatov
5d959f648e Convert old tinymce assets to new on fly 2019-05-08 14:23:26 +02:00
Anton Ignatov
dcf94e78e1 Merge branch 'master-with-note-section' into feature/marvinjs-integration 2019-05-08 14:03:41 +02:00
Urban Rotnik
62bc0520e9 Update method last_sync_timestamp from Last to First user 2019-05-08 08:38:11 +02:00
Urban Rotnik
2364c2653f Add bulk insert for UserSystemNotifications, New service for sending emails 2019-05-08 08:38:10 +02:00
Urban Rotnik
357c6e6b98 Change ordering by created_at instead by last_time_changed_at 2019-05-08 08:37:34 +02:00
Oleksii Kriuchykhin
8461949bed Fix deletion of inconfirmed users [SCI-3351] 2019-05-07 16:02:45 +02:00
Anton Ignatov
7f296b35fa Update team exporter for new tinymce images 2019-05-07 13:22:55 +02:00
Jure Grabnar
c866d96ea7
Merge pull request #1720 from jbargu/jg_sci_3375
One project is duplicated in project list [SCI-3375]
2019-05-06 11:43:24 +02:00
Anton Ignatov
565a4959b4 small fixes and improvments 2019-05-03 15:24:28 +02:00
Anton Ignatov
88e67a16c2 Merge branch 'master-with-note-section' into feature/marvinjs-integration 2019-05-02 16:16:03 +02:00
Anton Ignatov
fef691d30f Add error handling and secutiry checks 2019-05-02 16:12:25 +02:00
Anton Ignatov
4d0d5aa014 Adding team sketches selector 2019-04-30 17:32:55 +02:00
Jure Grabnar
de6509cc97 Add distinct to #visible_to in project.rb
Closes SCI-3375
2019-04-30 16:40:12 +02:00
Anton Ignatov
7c55fcf0cf Merge branch 'master' into master-with-note-section 2019-04-30 12:07:59 +02:00
Oleksii Kriuchykhin
1b792e2b7e Improve clean up of Export All files [SCI-3368] 2019-04-30 00:43:34 +02:00
Mojca Lorber
5fd4c47388 Move change owner functionality to RepositoryRow 2019-04-29 14:02:02 +02:00
Anton Ignatov
f80d881847 Fix markup 2019-04-28 19:11:41 +02:00
Anton Ignatov
2847ec7609 Add env variable and check for MarvinJS available 2019-04-28 17:08:18 +02:00
Anton Ignatov
260810fff8 Add editing mode for tinymce images 2019-04-28 16:16:31 +02:00
Anton Ignatov
193edfbc35 Add marvin js support to TinyMCE 2019-04-27 22:54:59 +02:00
Anton Ignatov
fe620c4a63 Add marvin model and controller 2019-04-26 22:59:38 +02:00
Mojca Lorber
eac90109f7 Change ownership of inventory items, when a user leaves a team 2019-04-26 10:47:08 +02:00
Alex Kriuchykhin
6bb19ed0be
Merge pull request #1697 from okriuchykhin/ok_SCI_3264
Update limits for new rich text enabled fileds [SCI-3264]
2019-04-25 23:54:05 +02:00
Oleksii Kriuchykhin
a3f5974dbd Update limits for new rich text enabled fileds [SCI-3264] 2019-04-24 13:37:22 +02:00
aignatov-bio
84993ea3ef
Update protocol repository for new description format [SCI-3371] (#1689)
* Update protocol repository for new description format

* move image clone method to concerns
2019-04-24 13:34:56 +02:00
Oleksii Kriuchykhin
7c91b4a255 Merge remote-tracking branch 'scinote/master-with-note-section' into ok_SCI_3266 2019-04-23 17:01:13 +02:00
Oleksii Kriuchykhin
c7a707f9db Fix task clonning with TinyMCE images [SCI-3266] 2019-04-23 15:16:40 +02:00
Urban Rotnik
11a7a975af Merge branch 'features/scinote-improvements' into master-with-note-section 2019-04-23 14:50:03 +02:00
Anton Ignatov
aa2dab2014 Merge branch 'features/note-section' into master-with-note-section 2019-04-23 10:31:37 +02:00
Jure Grabnar
1da1558849
Merge pull request #1683 from jbargu/jg_3179
Archived results are now separated in exported project
2019-04-19 18:26:22 +02:00
aignatov-bio
6b45dcd475
Update eln export for new tinyMCE image format (#1680) 2019-04-19 14:44:40 +02:00
Jure Grabnar
1295c0583a Archived results are now separated in exported project
Closes SCI-3179
2019-04-17 16:37:21 +02:00
Oleksii Kriuchykhin
f9832013b0 Improve experiment preview image generation [SCI-3177] 2019-04-17 12:06:46 +02:00
Urban Rotnik
0ba0dccd57
Merge pull request #1675 from urbanrotnik/ur-sci-3345-export-all-counter-fix
Fix for exports_left, fix for some edge cases [SCI-3345]
2019-04-16 10:32:31 +02:00
Urban Rotnik
22af36dd2d Fix for exports_left, fix for some edge cases 2019-04-16 09:59:02 +02:00
aignatov-bio
8d7cc57da1
Add zoom to image annotation and check jpeg file quality before save [SCI-3300] (#1654)
* Add zoom to image annotation and check jpeg file quality before save
* Move compression to front end
* Move quality extractor to paperclip processor
2019-04-15 09:49:44 +02:00
aignatov-bio
8ba0555922
Add check for tasks complete in project notifications (#1657) 2019-04-12 09:17:34 +02:00
Urban Rotnik
caccf8d9f0 Reset counter for export in last 24 hours
Fix for check if user has avaiable exports, bit refactored increas_counter method.
2019-04-10 10:56:33 +02:00
aignatov-bio
e2e299b424
Add dynamic generating filters for global activities [SCI-3228] (#1644)
* Add dynamic generating filters

* Add url methods
2019-04-09 09:08:27 +02:00
Jure Grabnar
bc9eff2ef5 Add asset validation on wopi creation
Missing file
2019-04-04 17:05:25 +02:00
Miha Mencin
97d9fde3fd SCI-3286 add breadcrumbs to the report activity 2019-04-04 10:30:31 +02:00
Jure Grabnar
26848ecaef Refactor step position + 1 into a method 2019-04-03 13:07:30 +02:00
Alex Kriuchykhin
bfd275c313
Merge pull request #1632 from okriuchykhin/ok_SCI_3281
Fix permission checks for file editing and make protocol preview files read only [SCI-3281]
2019-04-03 11:39:59 +02:00
aignatov-bio
e034a0c055
Fix bug with update protocol from repository and modal disable button [SCI-3284] (#1631)
* Fix bug with update protocol from repository and modal disable button
2019-04-03 09:18:18 +02:00
Oleksii Kriuchykhin
ffa7c5ecb2 Fix permition checks for file editing and make protocol preview files read only [SCI-3281] 2019-04-02 16:38:53 +02:00
Anton Ignatov
c9f9523210 Remove src when save description and rename token tag 2019-04-02 13:41:32 +02:00
aignatov-bio
e6102c72c7
Adding missed activities [SCI-3253] (#1614)
* Adding missed activties

* Adding test for activities
2019-04-02 11:50:37 +02:00
aignatov-bio
e93b0c3109
Adding preload filters for global activities [SCI-3254] (#1619)
* Adding preload filter for global activities

* Adding link to task activities
2019-04-02 11:14:36 +02:00
Urban Rotnik
b91f08fe99 Add activity for copying Inventory and Invetory item 2019-04-01 15:40:00 +02:00
Alex Kriuchykhin
b3aa6be23d
Merge pull request #1621 from okriuchykhin/ok_SCI_3255
Add global activities to reports [SCI-3255]
2019-04-01 15:07:06 +02:00
Jure Grabnar
83130426e2
Merge pull request #1617 from jbargu/jg_3244
Duplicated activity, report activity ... [SCI-3244]
2019-04-01 14:31:53 +02:00
Jure Grabnar
111b0e2b7f
Merge pull request #1615 from jbargu/jg_sci_3252
Change breadcrumbs for copy as template experiment, missing activity for move workflow [SCI-3252]
2019-04-01 12:30:48 +02:00
Oleksii Kriuchykhin
98e58ff7eb Add global activities to reports [SCI-3255] 2019-04-01 11:26:51 +02:00
Jure Grabnar
6533368763 Add activity for importing inv items 2019-03-29 15:41:34 +01:00
Jure Grabnar
f843092aac Add activity for moving worklfows
Closes SCI-3252
2019-03-29 13:51:17 +01:00
Oleksii Kriuchykhin
7d4fbcb32e Fix unconfirmed users clean-up issues [SCI-3172] 2019-03-29 11:11:53 +01:00
Alex Kriuchykhin
9137740266
Merge pull request #1607 from okriuchykhin/ok_SCI_3229
Fix links for archived objects in global activities [SCI-3229][SCI-3241]
2019-03-28 17:32:24 +01:00
Oleksii Kriuchykhin
d7d45bec70 Fix links for archived objects in global activities [SCI-3229] 2019-03-28 13:43:50 +01:00
mlorb
5f663b3c74
Merge pull request #1600 from mlorb/ml-sci-3215
Implement missing tests for global activities [SCI-3215][SCI-3219]
2019-03-28 11:10:38 +01:00
Oleksii Kriuchykhin
37c559debd Fix experiment workflow image display after touching [SCI-3177] 2019-03-27 17:02:59 +01:00
Mojca Lorber
f06358b2ae Implement missing tests for global activities (task and protocol activities) 2019-03-27 11:24:44 +01:00
aignatov-bio
c2e1e85913
Adding localization for activity name and activity group (#1598) 2019-03-27 10:33:33 +01:00
Oleksii Kriuchykhin
dab75d5aec Fix duplicated projects in new report modal [SCI-3173] 2019-03-26 17:24:30 +01:00
Alex Kriuchykhin
935e3a65cf
Merge pull request #1586 from okriuchykhin/ok_SCI_3199
Fix multiple bugs in global activities [SCI-3197][SCI-3199][SCI-3213][SCI-3225]
2019-03-26 16:02:44 +01:00
aignatov-bio
54fd3a748b
Adding activity groups [SCI-3203] (#1588)
* Adding activty groups
2019-03-26 15:29:21 +01:00
Oleksii Kriuchykhin
e3a3ec4491 Fix multiple bugs in global activities [SCI-3197][SCI-3199][SCI-3213][3225] 2019-03-25 17:38:13 +01:00
Miha Mencin
4a87216a3d
Merge branch 'master' into features/global-activities 2019-03-25 14:35:24 +01:00
Anton Ignatov
4ec0a3c871 Update TinyMCE image loader for new fields 2019-03-22 10:52:26 +01:00
Anton Ignatov
5d6f009ee8 fix error for delay deleting 2019-03-20 15:20:31 +01:00
Anton Ignatov
55c93922ea markup fixes 2019-03-20 14:46:54 +01:00
Anton Ignatov
07c2819163 refactoring tinymce image uploading 2019-03-20 14:46:54 +01:00
Mojca Lorber
4f9814b884 Merge branch 'features/global-activities' of github.com:biosistemika/scinote-web into ml-sci-3021 2019-03-20 11:03:00 +01:00
Mojca Lorber
42ff1c0a68 fix bug in revert protocol method 2019-03-20 09:43:38 +01:00