377 commits

Author	SHA1	Message	Date
Mojca Lorber	42d6d727b9	Add archive to repository rows	2020-06-04 23:29:37 +02:00
aignatov-bio	4a6d7d0e12	Add archived inventories	2020-06-04 19:07:10 +02:00
Mojca Lorber	d8523e03c8	Add db changes	2020-06-04 16:08:29 +02:00
Mojca Lorber	d3806e53a5	Add archive to repository	2020-06-04 15:44:47 +02:00
Oleksii Kriuchykhin	c74fa3c244	Make snapshots selectable [SCI-4596]	2020-05-13 17:58:05 +02:00
Oleksii Kriuchykhin	307a5d7e1b	Improve code style in migration [SCI-4552]	2020-04-29 10:42:00 +02:00
Oleksii Kriuchykhin	e6ad5047e0	Implement background processing of repository snapshots [SCI-4552]	2020-04-28 12:09:36 +02:00
Oleksii Kriuchykhin	3a67c99982	Switch to STI for repositories, fix cell values snapshotting [SCI-4516]	2020-04-09 12:33:04 +02:00
Oleksii Kriuchykhin	a9c3102835	Add repository snapshots with service, refactor item assigning [SCI-4516]	2020-04-07 18:26:39 +02:00
Oleksii Kriuchykhin	3c53be1f9a	Add start date to the task [SCI-4504]	2020-03-31 14:17:14 +02:00
Oleksii Kriuchykhin	c2409bbfef	Update structure.sql [SCI-4330]	2020-02-07 15:30:15 +01:00
Oleksii Kriuchykhin	6f8f89fbf0	Improve speed of global activities fetching query [SCI-4330]	2020-02-07 13:53:25 +01:00
Urban Rotnik	1531a2f47e	Structure.sql fix	2020-01-22 12:25:07 +01:00
Oleksii Kriuchykhin	fc4cd6d14c	Fix includes in transactions [SCI-4251]	2020-01-16 17:14:20 +01:00
Oleksii Kriuchykhin	1c33885754	Fix status item migration [SCI-4251]	2020-01-16 16:05:49 +01:00
Oleksii Kriuchykhin	8c2b1e5037	Fix global search for repositories and checklists update [SCI-4251]	2020-01-16 15:30:19 +01:00
Alex Kriuchykhin	da26d8a018	Merge pull request #2304 from okriuchykhin/ok_SCI_4204 ... Refactor repository cell cloning to support all data types [SCI-4204]	2020-01-15 13:04:50 +01:00
Oleksii Kriuchykhin	9e8bd23616	Merge latest branch 'develop' into ok_SCI_3988	2020-01-15 10:52:20 +01:00
Oleksii Kriuchykhin	eed68a2590	Refactor repository cell clonning to support all data types [SCI-4204]	2020-01-14 16:55:10 +01:00
Oleksii Kriuchykhin	7b82e33eb6	Fix repository filtering and improve speed [SCI-4224]	2020-01-13 16:09:07 +01:00
Oleksii Kriuchykhin	522ae12f08	Merge branch 'develop' into ok_SCI_3988	2020-01-07 17:07:22 +01:00
Oleksii Kriuchykhin	1b902ff4b3	Merge branch 'develop' into ok_SCI_3988	2020-01-07 15:26:30 +01:00
Oleksii Kriuchykhin	3e82b1ae89	Fix migrations [SCI-3988]	2020-01-07 13:43:32 +01:00
aignatov-bio	725bb449d5	Fix naming	2019-12-23 09:20:36 +01:00
aignatov-bio	54800cb69b	Merge branch 'features/new-column-types' into ai-sci-4168-refactor-checklist-model	2019-12-20 15:46:39 +01:00
aignatov-bio	16c4879e56	Merge migrations and update sorting	2019-12-20 15:42:54 +01:00
aignatov-bio	dc91893d7e	Refactor checklist column data structure	2019-12-18 14:10:41 +01:00
Urban Rotnik	7153711570	Move delimiter from column to metadata	2019-12-18 10:22:52 +01:00
aignatov-bio	7fc9c0d1e4	Adding frontend for checklist edit mode	2019-12-10 15:58:59 +01:00
Mojca Lorber	1c342d1d26	structure changes	2019-12-10 13:52:55 +01:00
Mojca Lorber	a3a5b21951	small fixes	2019-12-10 12:02:08 +01:00
Mojca Lorber	8503dd7007	Add numeric repository column type	2019-12-09 16:38:21 +01:00
aignatov-bio	09079fbcda	Fix naming and tests	2019-12-09 13:48:36 +01:00
aignatov-bio	d8676596f1	Add checklists column type	2019-12-09 13:48:36 +01:00
Urban Rotnik	e934e08c17	Implement STI for DateTimeValue types	2019-12-06 12:50:19 +01:00
Urban Rotnik	f39af1916f	Split DateTime and DateTimeRange column types, rename DateType table	2019-11-29 10:19:16 +01:00
Urban Rotnik	b9935ce7de	structure.sql fix	2019-11-29 10:19:15 +01:00
Urban Rotnik	2a20ad68a3	Add range column to RepositoryColumn	2019-11-29 10:19:14 +01:00
Urban Rotnik	b591346a3f	Add DateTime type column	2019-11-29 10:19:13 +01:00
Urban Rotnik	b2ce600820	Add delimiter column for repository_column	2019-11-29 10:19:10 +01:00
Urban Rotnik	24acf1f84b	Fix edit mode for File and Text	2019-11-29 10:19:08 +01:00
Urban Rotnik	c00a837105	Add models for RepositoryStatus column type	2019-11-29 10:16:43 +01:00
Oleksii Kriuchykhin	b2862b6c9e	Remove Paperclip DB columns and fix experiment templates [SCI-3988]	2019-11-18 14:16:28 +01:00
aignatov-bio	0801df6f9c	Fix structure.sql	2019-11-18 13:59:55 +01:00
aignatov-bio	f428bc3921	Remove schema.rb	2019-11-18 13:59:55 +01:00
aignatov-bio	8fd4b46416	Fix migration conflict	2019-11-18 13:59:55 +01:00
aignatov-bio	cb5baa3d13	Fix migration	2019-11-18 13:59:54 +01:00
aignatov-bio	b1f9e7f1ca	Fix global activities jsonb field [SCI-3830] (#2030) ... * Fix global activities jsonb field * Fix tests	2019-11-18 13:59:54 +01:00
Oleksii Kriuchykhin	53402c9ce1	Fix images in reports, impove speed of report generation [SCI-3990][SCI-3993]	2019-10-17 13:30:14 +02:00
Miha Mencin	e68b8f55c2	skip individual checking	2019-10-09 18:00:06 +02:00
Miha Mencin	2ef095b003	Additional check for attached workflowimages	2019-10-09 17:17:33 +02:00
Oleksii Kriuchykhin	de33cb5751	Rename prepared statement for experiment files migration [SCI-3949]	2019-10-09 17:04:43 +02:00
Oleksii Kriuchykhin	75ed617e34	Add AS migration for existing experiment images [SCI-3949]	2019-10-09 16:47:32 +02:00
Oleksii Kriuchykhin	ab395f46d0	Add paperclip for backward compatibility [SCI-3949]	2019-10-09 10:28:02 +02:00
Oleksii Kriuchykhin	52bbf6740d	Remove paperclip attachments from migrations [SCI-3908]	2019-10-03 13:59:17 +02:00
Alex Kriuchykhin	2c3c690713	Merge pull request #2113 from okriuchykhin/ok_SCI_3839 ... Remove the deprecated foreign keys from TinyMceAsset [SCI-3839]	2019-10-02 10:39:35 +02:00
Oleksii Kriuchykhin	efe5d8a6ea	Remove the deprecated foreign keys from TinyMceAsset [SCI-3839]	2019-10-01 15:49:37 +02:00
Oleksii Kriuchykhin	f00f594dbf	Improve ActiveStorage migrations [SCI-3854]	2019-10-01 12:45:51 +02:00
Urban Rotnik	60a414c4ec	Change migrations order back	2019-09-27 16:20:56 +02:00
Jure Grabnar	c748513ca9	Rename Active storage migration to a later date	2019-09-26 13:55:30 +02:00
Oleksii Kriuchykhin	b841d3dd6b	Add override for ActiveStorage downloader to handle missing file checksums [SCI-3888]	2019-09-18 15:34:49 +02:00
aignatov-bio	64306cfb2a	Fix active storage migration script (#2060) ... * Fix active storage migration script * Update check logic	2019-09-18 09:20:04 +02:00
Oleksii Kriuchykhin	0475394b08	Fix test [SCI-3881]	2019-09-16 13:03:41 +02:00
Oleksii Kriuchykhin	3509543e7b	Merge branch 'master' into ok_SCI_3881	2019-09-16 11:56:49 +02:00
Oleksii Kriuchykhin	bc38c6b29e	Fix failing test [SCI-3745]	2019-09-16 10:26:13 +02:00
Oleksii Kriuchykhin	c068901b00	Upgrade Rails to 6.0 [SCI-3745]	2019-09-12 17:24:08 +02:00
Oleksii Kriuchykhin	419a4c8e8c	Update trim_html_tags Postgres function [SCI-3726]	2019-08-30 16:42:03 +02:00
Oleksii Kriuchykhin	267c53c2d2	Refactor inventory sharing logic [SCI-3803]	2019-08-29 17:21:49 +02:00
Luka Murn	68e3fed14c	Remove uneccesary pg sql extension from db/schema.rb	2019-08-23 16:04:24 +02:00
Urban Rotnik	0ce331227c	Update permission and model to share repository over all teams	2019-08-13 14:07:24 +02:00
Urban Rotnik	1a77702fa7	Add uniq index for Repository and Team in TeamRepositories	2019-08-09 14:13:00 +02:00
Urban Rotnik	f569411bc7	Add TeamRepository model	2019-08-09 14:12:59 +02:00
Oleksii Kriuchykhin	d52df56fc4	Fix production build and update packages [SCI-3678]	2019-08-08 14:03:15 +02:00
Jure Grabnar	aa5431b153	Fix broken migrations	2019-08-05 18:22:07 +02:00
Luka Murn	6017f40cef	Add migration to remove samples' associated data from DB	2019-07-26 10:28:05 +02:00
Luka Murn	83bb89fdf5	Cherry-picked commit from ZZ (and LM)'s various changes	2019-07-26 10:13:14 +02:00
Anton Ignatov	ffd415d409	Inital refactor for Assets model	2019-07-12 15:02:06 +02:00
Anton Ignatov	57a273d5d0	Merge branch 'activestorage_migration' into features/marvinjs-integration	2019-07-12 11:34:41 +02:00
Oleksii Kriuchykhin	9d926dc956	Refactor TinyMce assets, user avatars, zip files [SCI-3539]	2019-07-05 16:56:05 +02:00
Anton Ignatov	c9ae9f056e	Merge branch 'okriuchykhin-ok_SCI_3539' into features/marvinjs-integration	2019-07-01 10:44:29 +02:00
Oleksii Kriuchykhin	5acb16d43e	Update Asset helper methods [SCI-3539]	2019-06-28 08:17:09 +02:00
Oleksii Kriuchykhin	ba2daede0b	Add migration scripts [SCI-3539]	2019-06-24 15:17:42 +02:00
Anton Ignatov	7e5c39d3e4	Merge branch 'master' into features/marvinjs-integration	2019-06-21 14:51:45 +02:00
aignatov-bio	9653f16196	Convert image to base64 in PDF reports [SCI-3557] (#1835) ... * Convert image to base64 in PDF reports * Fix typo error	2019-06-19 13:57:04 +02:00
Oleksii Kriuchykhin	109793c7fb	Upgrade to Rails 5.2.3 and add ActiveStorage [SCI-3539]	2019-06-13 12:10:44 +02:00
Anton Ignatov	16d00340cd	Fix merge errors	2019-05-31 10:35:04 +02:00
Anton Ignatov	c9a29b12ba	Merge branch 'master' into features/marvinjs-integration	2019-05-31 10:27:14 +02:00
Oleksii Kriuchykhin	d46d82d0f0	Fix Hound warning [SCI-3368]	2019-05-21 10:56:55 +02:00
Oleksii Kriuchykhin	d3f29d5d72	Add type column to zip_exports for STI [SCI-3368]	2019-05-20 16:35:24 +02:00
Anton Ignatov	259b75a6ba	Merge branch 'master' into features/marvinjs-integration	2019-05-16 09:28:48 +02:00
Anton Ignatov	652fba0e23	Merge branch 'master-with-note-section'	2019-05-13 11:08:11 +02:00
Urban Rotnik	2364c2653f	Add bulk insert for UserSystemNotifications, New service for sending emails	2019-05-08 08:38:10 +02:00
Anton Ignatov	f80d881847	Fix markup	2019-04-28 19:11:41 +02:00
Anton Ignatov	46f0e0c0c2	Add marvin js assets to assets sort and name field	2019-04-27 12:46:45 +02:00
Anton Ignatov	fe620c4a63	Add marvin model and controller	2019-04-26 22:59:38 +02:00
Anton Ignatov	7d60eb5572	Fix migration issues	2019-04-23 11:11:22 +02:00
Anton Ignatov	aa2dab2014	Merge branch 'features/note-section' into master-with-note-section	2019-04-23 10:31:37 +02:00
aignatov-bio	6ac620feb3	Migration for old tinymce assets [SCI-3176] (#1663) ... * adding rake task * Addign test for update images * Adding tests for tiny mce model	2019-04-19 15:24:54 +02:00
Oleksii Kriuchykhin	4014f19665	Update schema.rb file	2019-04-17 14:57:38 +02:00
aignatov-bio	8d7cc57da1	Add zoom to image annotation and check jpeg file quality before save [SCI-3300] (#1654) ... * Add zoom to image annotation and check jpeg file quality before save * Move compression to front end * Move quality extractor to paperclip processor	2019-04-15 09:49:44 +02:00
aignatov-bio	08263ab64e	adding filters for task activities [SCI-3076] (#1553) ... * update task activity screen	2019-03-28 10:55:48 +01:00
Miha Mencin	4a87216a3d	Merge branch 'master' into features/global-activities	2019-03-25 14:35:24 +01:00
Anton Ignatov	5d6f009ee8	fix error for delay deleting	2019-03-20 15:20:31 +01:00
Anton Ignatov	55c93922ea	markup fixes	2019-03-20 14:46:54 +01:00
Anton Ignatov	07c2819163	refactoring tinymce image uploading	2019-03-20 14:46:54 +01:00
Anton Ignatov	87280f083a	[SCI-3166] Finalize global activities front end	2019-03-19 13:50:55 +01:00
Urban Rotnik	ad8e5973fa	Remove not null constraint from project_id in Activity table	2019-03-11 08:36:15 +01:00
Miha Mencin	6deaff6382	fixing hound errors	2019-03-04 18:36:32 +01:00
Miha Mencin	fa7bba9de7	scheduling creation of demo project at the sign in time ... remove wrong schema, fix comment, add migration	2019-03-04 18:26:15 +01:00
Miha Mencin	51b3aea49a	added uniquness validator and index on user_projects and user_teams relations ... finxing typo, fixied failing test fixing mistakenly commited file fixing schema to include bigint migration	2019-02-27 15:09:47 +01:00
Urban Rotnik	3ad6cee766	Fix tests, remove nullable field	2019-02-25 16:50:38 +01:00
Urban Rotnik	5b5c6c7122	Changes to Activity model	2019-02-25 16:49:55 +01:00
Urban Rotnik	7b6c6c414d	Merge branch 'master' into features/templates	2019-02-19 14:46:15 +01:00
aignatov-bio	c598541e09	System notification modal window [SCI-2957 and SCI-2958] (#1484) ... * Added new system notification modal * Adding loading system notification on sign in	2019-02-15 13:07:29 +01:00
aignatov-bio	5c85595ab4	System Notifications - View All Page [SCI-2956 and SCI-3001] (#1482) ... * System notification view and notification partial (SCI 2956 and SCI 3001)	2019-02-13 13:06:14 +01:00
Urban Rotnik	8ebb7561d9	Add last_time_changed_at columnd to SystemNotifications	2019-01-31 16:44:20 +01:00
Oleksii Kriuchykhin	cc92de3726	Merge latest features/templates [SCI-2939]	2019-01-30 10:43:54 +01:00
Urban Rotnik	3e2c9934d0	Add SystemNotification model ... - SystemNotifiction model with spec - UserSystemNotification model for many-many association	2019-01-29 11:40:26 +01:00
Oleksii Kriuchykhin	f7b73c617a	Fix code styling [SCI-2939]	2019-01-28 15:37:24 +01:00
Miha Mencin	4acd2a592d	Adding previously forgotten schema file	2019-01-28 11:25:35 +01:00
Oleksii Kriuchykhin	bd2efa55ac	Add templates business logic [SCI-2939]	2019-01-25 10:55:08 +01:00
Miha Mencin	6e16a63dcd	implementing suggestion from alex, now table and indices names are hardoced	2019-01-21 11:02:33 +00:00
Miha Mencin	7ade88cf92	SCI-2936 code style final	2019-01-18 09:38:04 +01:00
Miha Mencin	70b1852d64	SCI-2936 code style	2019-01-18 09:33:45 +01:00
Miha Mencin	2271e453df	SCI-2936 minor refactor and code styling	2019-01-18 09:25:32 +01:00
Miha Mencin	f6230b2c9a	SCI-2936 added down method, make code more readable	2019-01-17 18:10:45 +01:00
Miha Mencin	4a6459000f	SCI-2936 added migration	2019-01-17 17:54:15 +01:00
Alex Kriuchykhin	aac5c101a5	Merge pull request #1431 from okriuchykhin/ok_SCI_2864 ... Improve user's variables migration [SCI-2864]	2018-12-19 19:19:23 +01:00
Oleksii Kriuchykhin	90b46c665d	Refresh user's model in variables migration [SCI-2864]	2018-12-19 19:03:10 +01:00
Oleksii Kriuchykhin	70cc3742ad	Improve user's variables migration [SCI-2864]	2018-12-19 18:30:27 +01:00
Alex Kriuchykhin	ab0924c8e6	Merge pull request #1415 from okriuchykhin/ok_SCI_2864 ... Use built-in methods for Postgres extensions enabling [SCI-2864]	2018-12-16 19:45:56 +01:00
Oleksii Kriuchykhin	311189a2e9	Replace reports materialized view with normal queries and re-enable fragment caching [SCI-2894]	2018-12-13 11:18:09 +01:00
Oleksii Kriuchykhin	7cd1c12a4f	Use built-in methods for Postgres extensions enabling [SCI-2864]	2018-12-10 14:14:49 +01:00
Luka Murn	e9c0b34662	Merge branch 'core-api' into 'master' ... Conflicts: Gemfile app/services/api.rb config/initializers/api.rb config/initializers/extends.rb config/routes.rb db/schema.rb spec/controllers/api/api_controller_spec.rb	2018-11-14 16:59:04 +01:00
Luka Murn	84df2c81f9	Merge branch 'features/export-all' ... Conflicts: app/controllers/experiments_controller.rb app/controllers/my_modules_controller.rb db/schema.rb	2018-11-13 09:14:02 +01:00
Oleksii Kriuchykhin	02f536cd08	Merge latest features/export-all [SCI-2733]	2018-10-16 17:20:19 +02:00
Jure Grabnar	2558b7a313	Fix formatting according to HoundBot	2018-10-16 11:00:38 +02:00
Jure Grabnar	26df1e5a98	Add export project modal ... Closes [SCI-2645]	2018-10-16 11:00:38 +02:00
Oleksii Kriuchykhin	af02f29fb5	Implement user state saving for projects overview [SCI-2733]	2018-10-10 16:15:31 +02:00
Oleksii Kriuchykhin	49e788a9ad	Mergre latest core-api [SCI-2515]	2018-09-14 10:24:05 +02:00
Luka Murn	586a442abc	Refactor the settings page, rename setting to tooltips_enabled	2018-09-05 16:36:32 +02:00
Oleksii Kriuchykhin	ecde634a2c	Add OAuth2 provider [SCI-2515]	2018-08-17 13:17:59 +02:00
Oleksii Kriuchykhin	4df9a4c9ca	Fix code style warnings [SCI-2614][SCI-2616][SCI-2617]	2018-08-08 17:01:49 +02:00
Oleksii Kriuchykhin	938ec5acb8	Change primary key to bigint on repositories [SCI-2614][SCI-2616][SCI-2617]	2018-08-08 17:01:49 +02:00
zmagod	b45717185a	removes unneeded migrations	2018-05-28 13:12:27 +02:00
zmagod	b13e39a0d9	adds discard gem, move deletion of repositories in a rake task to run in background worker [fixes SCI-2448]	2018-05-24 14:39:25 +02:00
zmagod	b8098093ee	migrations that fixes the bug with smart annotations [fixes SCI-2426]	2018-05-18 13:57:52 +02:00
zmagod	9d282d1800	adds new reports index page [fixes SCI-2124]	2018-04-18 16:47:52 +02:00
Oleksii Kriuchykhin	a105e61d48	Remove tutorial [SCI-1860]	2018-03-18 13:18:05 +01:00
mlorb	64e26e1c60	add file custom column type to db	2018-03-09 17:04:54 +01:00