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6776 commits 40 branches 184 tags 168 MiB
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1637 commits

Author SHA1 Message Date
Jure Grabnar
4f6397b5b9 Add form to external_sources#new action 
Closes SCI-3532
 2019-06-17 12:24:15 +02:00
Jure Grabnar
c8b8bcffdb Add external_protocols#show action 2019-06-17 12:24:14 +02:00
Jure Grabnar
f7c6f78925 Add external_protocols#index action 2019-06-17 12:24:14 +02:00
Jure Grabnar
2a61075156 Add ExternalProtocols#create action and tests 2019-06-17 12:24:14 +02:00
Jure Grabnar
9baa66c998 Refactor OnlineSources -> ExternalProtocols 2019-06-17 12:24:13 +02:00
Jure Grabnar
eb0d677a36 Refactor pio_protocol -> built_protocol 2019-06-17 12:24:13 +02:00
Jure Grabnar
94e7fe1e6c OnlineSourcesController skeleton and #new action tested 2019-06-17 12:24:13 +02:00
Anton Ignatov
f480c0eb8d Adding new activtiies for image editing 2019-06-14 16:15:30 +02:00
aignatov-bio
52a2f5cd0e
Add recent protocols dropdown to task page [SCI-3417] (#1800) 
* Add recent protocols dropdown to task page
 2019-06-13 15:47:29 +02:00
Alex Kriuchykhin
bc94771828
Merge pull request #1791 from okriuchykhin/ok_SCI_3461 
Refactor the async thumbnail reloading (spinner) [SCI-3461]
 2019-06-12 15:35:15 +02:00
Alex Kriuchykhin
4f851b0995
Merge pull request #1816 from aignatov-bio/ai-sci-3525-fix-nil-error-in-module-tag-controller 
Fix nil issue in tags_my_module controller [SCI-3525]
 2019-06-12 13:11:40 +02:00
Oleksii Kriuchykhin
a855eade4c Merge branch 'master' into ok_SCI_3461 2019-06-11 17:48:02 +02:00
Oleksii Kriuchykhin
6e1a7a3392 Implement saving of attachments ordering on steps [SCI-3436] 2019-06-11 10:08:33 +02:00
Alex Kriuchykhin
36255f82ed
Merge pull request #1817 from okriuchykhin/ok_SCI_3522 
Add system notifications service to health check endpoint [SCI-3522]
 2019-06-04 14:41:43 +02:00
aignatov-bio
d207cf5dce
Refactored comments over SciNote [SCI-3505] (#1808) 
* Preparing helpers for comments

* Refactored comments over scinote

* Update events
 2019-06-04 14:40:21 +02:00
Anton Ignatov
5df55d39be Fix nil issue in module controller 2019-05-31 16:02:21 +02:00
Oleksii Kriuchykhin
552f69b9b1 Add system notifications service to health check endpoint [SCI-3522] 2019-05-31 15:52:47 +02:00
Anton Ignatov
c9a29b12ba Merge branch 'master' into features/marvinjs-integration 2019-05-31 10:27:14 +02:00
aignatov-bio
94b220172d
Fix empty result name issue (#1812) 2019-05-31 09:48:58 +02:00
Oleksii Kriuchykhin
5a9640c5d1 Add aditional checks for inventory state objects [SCI-3412] 2019-05-27 17:32:21 +02:00
aignatov-bio
8f2d873130
Fix error when editing office document (#1793) 2019-05-22 10:34:16 +02:00
Oleksii Kriuchykhin
84a2ad4487 Refactor the async thumbnail reloading (spinner) [SCI-3461] 2019-05-21 17:29:33 +02:00
aignatov-bio
59e824ef9e
Fix nil handling in different places [SCI-2840] (#1777) 
* Fix nil handling in different places
 2019-05-21 15:53:34 +02:00
mlorb
be0393e642
Merge pull request #1785 from biosistemika/lm-ml-sci-3193 
Update protocol status bar upon protocol changing [SCI-3193]
 2019-05-21 15:28:58 +02:00
aignatov-bio
2de2ead723
Refactor avatar image appearance across Scinote [SCI-3482] (#1787) 
* Refactor avatar appearance across Scinote
 2019-05-21 15:19:44 +02:00
Mojca Lorber
b479a6a145 Cover all use cases for updating protocol status bar 2019-05-20 16:09:43 +02:00
Oleksii Kriuchykhin
1128fedc51 Refactor title inline editing permission checking [SCI-3471] 2019-05-20 13:13:31 +02:00
Alex Kriuchykhin
df59c54bd4
Merge pull request #1776 from okriuchykhin/ok_SCI_3477 
Fix protocol metadata editing in repository [SCI-3477]
 2019-05-17 09:42:13 +02:00
Oleksii Kriuchykhin
488fc99dae Fix protocol metadata editing in repository [SCI-3477] 2019-05-16 17:11:17 +02:00
Anton Ignatov
259b75a6ba Merge branch 'master' into features/marvinjs-integration 2019-05-16 09:28:48 +02:00
aignatov-bio
24e30867da
Add smart annotation to comments [SCI-3458] (#1768) 
* Add smart annotation to comments
 2019-05-15 14:59:15 +02:00
Oleksii Kriuchykhin
5b0e9872c3 Improve handling of CSRF token errors [SCI-2841] 2019-05-14 17:02:56 +02:00
Alex Kriuchykhin
e544edeaf7
Merge pull request #1758 from okriuchykhin/ok_SCI_3381 
Fix handling of processing step attachments [SCI-3381]
 2019-05-14 09:26:30 +02:00
Oleksii Kriuchykhin
4b1c4bd140 Fix handling of proccessing step attachments [SCI-3381] 2019-05-13 17:12:06 +02:00
Luka Murn
bd9ffe4bd2 Refactor WOPI filename length validation onto the model 2019-05-13 15:41:39 +02:00
Anton Ignatov
652fba0e23 Merge branch 'master-with-note-section' 2019-05-13 11:08:11 +02:00
Miha Mencin
5ff344c208
Merge pull request #1746 from biosistemika/lm-sci-3426 
Changes to create new office file button [SCI-3426]
 2019-05-13 10:55:58 +02:00
aignatov-bio
d3aa6371cd
Fix report saving [SCI-3443] (#1753) 
* Fix report saving

* Fix the report saving by using the reports' structures

* Remove uneccesary yarn.lock (mistake)
 2019-05-13 10:55:08 +02:00
aignatov-bio
da5b24ef57
Fix attachment appearence after update (#1745) 2019-05-13 10:54:16 +02:00
Anton Ignatov
e5b4adcc25 Merge branch 'master-with-note-section' into features/marvinjs-integration 2019-05-11 20:51:01 +02:00
Luka Murn
890df8803e Add file name validation to create new Office file modal window 2019-05-10 18:19:32 +02:00
Luka Murn
5135922254 Move the WOPI controls partial to /wopi folder, fix typo 2019-05-10 16:51:54 +02:00
Luka Murn
b78caef915 Fix the file preview modal so it supports WOPI_ENABLED == false 2019-05-10 16:41:11 +02:00
Alex Kriuchykhin
2a7f70929a
Merge pull request #1717 from okriuchykhin/ok_SCI_3368 
Improve clean up of Export All files [SCI-3368]
 2019-05-09 13:37:56 +02:00
Anton Ignatov
2e6bab4638 Fix smart anottation to protocols in repository 2019-05-09 09:40:40 +02:00
Oleksii Kriuchykhin
40550f92c9 Improve HTML data escaping in JSON endpoints [SCI-3403] 2019-05-08 17:38:24 +02:00
Anton Ignatov
565a4959b4 small fixes and improvments 2019-05-03 15:24:28 +02:00
Anton Ignatov
88e67a16c2 Merge branch 'master-with-note-section' into feature/marvinjs-integration 2019-05-02 16:16:03 +02:00
Anton Ignatov
fef691d30f Add error handling and secutiry checks 2019-05-02 16:12:25 +02:00
Anton Ignatov
f73dd38780 Add image editor to tinymce drawings 2019-04-30 18:32:59 +02:00
Anton Ignatov
4d0d5aa014 Adding team sketches selector 2019-04-30 17:32:55 +02:00
Anton Ignatov
7c55fcf0cf Merge branch 'master' into master-with-note-section 2019-04-30 12:07:59 +02:00
aignatov-bio
687b53feb1
Add new tag activtiies [SCI-3341] (#1712) 
* Add new tag activtiies
 2019-04-30 10:23:09 +02:00
Jure Grabnar
b37349624a
Merge pull request #1714 from biosistemika/jg_sci_3380 
Add editnew action for editing new office files [SCI-3380]
 2019-04-30 09:57:07 +02:00
Jure Grabnar
ed003aca13 Add editnew action for editing new office files 
Closes SCI-3380
 2019-04-30 08:19:52 +02:00
Oleksii Kriuchykhin
1b792e2b7e Improve clean up of Export All files [SCI-3368] 2019-04-30 00:43:34 +02:00
Anton Ignatov
f80d881847 Fix markup 2019-04-28 19:11:41 +02:00
Anton Ignatov
260810fff8 Add editing mode for tinymce images 2019-04-28 16:16:31 +02:00
Anton Ignatov
193edfbc35 Add marvin js support to TinyMCE 2019-04-27 22:54:59 +02:00
Anton Ignatov
54731856f0 Finish step chemical attachments 2019-04-27 19:08:40 +02:00
Anton Ignatov
cf4ff41ec6 Add delete feature 2019-04-27 13:51:35 +02:00
Anton Ignatov
fe620c4a63 Add marvin model and controller 2019-04-26 22:59:38 +02:00
Mojca Lorber
9e04eb8ea1 Fixes upon Urbans request 2019-04-26 11:34:53 +02:00
aignatov-bio
1a860037f7
Update reports for new RTE [SCI-3263] (#1691) 
* Update reports for new RTE
 2019-04-25 16:16:43 +02:00
Urban Rotnik
0cf688be39
Merge pull request #1692 from urbanrotnik/ur-sci-3135-comments-section-changes 
Comments section changes [SCI-3135]
 2019-04-25 14:18:05 +02:00
aignatov-bio
84993ea3ef
Update protocol repository for new description format [SCI-3371] (#1689) 
* Update protocol repository for new description format

* move image clone method to concerns
 2019-04-24 13:34:56 +02:00
Urban Rotnik
774521df7a Changes to comments section in Task Steps 2019-04-23 15:02:58 +02:00
Urban Rotnik
11a7a975af Merge branch 'features/scinote-improvements' into master-with-note-section 2019-04-23 14:50:03 +02:00
Anton Ignatov
7d60eb5572 Fix migration issues 2019-04-23 11:11:22 +02:00
Anton Ignatov
aa2dab2014 Merge branch 'features/note-section' into master-with-note-section 2019-04-23 10:31:37 +02:00
aignatov-bio
6b45dcd475
Update eln export for new tinyMCE image format (#1680) 2019-04-19 14:44:40 +02:00
aignatov-bio
a75c4c2f91
Update Result API for new tiny mce image format (#1674) 2019-04-19 14:44:16 +02:00
Mojca Lorber
b00cf07684 Add activity for importing inventory items 2019-04-18 15:18:10 +02:00
Oleksii Kriuchykhin
f9832013b0 Improve experiment preview image generation [SCI-3177] 2019-04-17 12:06:46 +02:00
Urban Rotnik
782d1dfc2d
Merge pull request #1677 from urbanrotnik/ur-sci-3345-export-all-counter-fix-2 
Exports left after export [SCI-3345]
 2019-04-16 14:44:48 +02:00
Urban Rotnik
4f8faba84e Exports left after export fix 2019-04-16 14:21:47 +02:00
Urban Rotnik
0ba0dccd57
Merge pull request #1675 from urbanrotnik/ur-sci-3345-export-all-counter-fix 
Fix for exports_left, fix for some edge cases [SCI-3345]
 2019-04-16 10:32:31 +02:00
Urban Rotnik
22af36dd2d Fix for exports_left, fix for some edge cases 2019-04-16 09:59:02 +02:00
Urban Rotnik
7eeba0e57e
Merge pull request #1670 from urbanrotnik/ur-sci-3343-dynamic-filtering-default-fix 
Dynamic filtering default fix [SCI-3343]
 2019-04-15 11:40:16 +02:00
Urban Rotnik
83f2a5c961 Dynamic filtering default fix 2019-04-15 11:20:43 +02:00
Alex Kriuchykhin
a61d637e6d
Merge pull request #1669 from okriuchykhin/ok_SCI_3340 
Fix crash when no activities present [SCI-3340]
 2019-04-15 11:13:25 +02:00
Oleksii Kriuchykhin
a43e42fdb3 Fix crash when no activities present [SCI-3340] 2019-04-15 10:51:59 +02:00
aignatov-bio
063f02dc56
Add ability to select filters with keyboard [SCI-3200] (#1649) 
* Add ability to select fitlers with keyboard
 2019-04-15 10:30:08 +02:00
aignatov-bio
8d7cc57da1
Add zoom to image annotation and check jpeg file quality before save [SCI-3300] (#1654) 
* Add zoom to image annotation and check jpeg file quality before save
* Move compression to front end
* Move quality extractor to paperclip processor
 2019-04-15 09:49:44 +02:00
Alex Kriuchykhin
3250ab70f4
Merge pull request #1668 from okriuchykhin/ok_SCI_3292_v2 
Switch to kaminari pagination in global activities [SCI-3292]
 2019-04-12 16:04:48 +02:00
Oleksii Kriuchykhin
231106e131 Switch to kaminari pagination in global activities [SCI-3292] 2019-04-12 15:37:45 +02:00
Jure Grabnar
be90881849
Merge pull request #1665 from jbargu/jg_sci_2949_3318 
Disable editing of office file in view mode when module is locked [SCI-2949, 3318]
 2019-04-12 13:00:18 +02:00
Jure Grabnar
1e5721ce95 Disable editing of office file in view mode when module is locked 
Closes SCI-2949
 2019-04-11 17:21:07 +02:00
Alex Kriuchykhin
7f20b7fa20
Merge pull request #1661 from okriuchykhin/ok_SCI_3292 
Improve global activities pagination and fetching [SCI-3292]
 2019-04-11 16:23:37 +02:00
aignatov-bio
9377628f5e
Release team space after update image [SCI-3299] (#1656) 
* Release team space after update image
 2019-04-11 09:20:05 +02:00
Oleksii Kriuchykhin
d378e33038 Improve global activities pagination and fetching [SCI-3292] 2019-04-10 15:45:17 +02:00
aignatov-bio
cfbb2a83a6
Merge pull request #1650 from aignatov-bio/ai-sci-3295-update-api-endpoints-new-activities 
Update API endpoints for new activities [SCI-3295]
 2019-04-10 13:46:30 +02:00
Urban Rotnik
caccf8d9f0 Reset counter for export in last 24 hours 
Fix for check if user has avaiable exports, bit refactored increas_counter method.
 2019-04-10 10:56:33 +02:00
aignatov-bio
e2e299b424
Add dynamic generating filters for global activities [SCI-3228] (#1644) 
* Add dynamic generating filters

* Add url methods
 2019-04-09 09:08:27 +02:00
Anton Ignatov
811f07a62c Update API endpoints for new activities 2019-04-08 15:07:45 +02:00
Jure Grabnar
d60cc2cd1c Refactor create_wopi_file 2019-04-04 17:05:25 +02:00
Jure Grabnar
20446fb39d Hound formatting fixes 2019-04-04 17:05:25 +02:00
Jure Grabnar
983f90ddf6 Add file name presence check 2019-04-04 17:05:25 +02:00
Jure Grabnar
b12916b828 Add main functionality 2019-04-04 17:05:25 +02:00
Jure Grabnar
613843d095 Temp commit 2019-04-04 16:58:55 +02:00
Jure Grabnar
9a4cd4fda2 Add file_present true 2019-04-04 16:57:36 +02:00
Jure Grabnar
3b8e6fa47c Test office online 2019-04-04 16:57:36 +02:00
aignatov-bio
a1047f4597
Fix activities wording [SCI-3287] (#1635) 
* Fix activities wording

* Adding project to export protocol
 2019-04-04 10:45:35 +02:00
Alex Kriuchykhin
c86b535a25
Merge pull request #1638 from okriuchykhin/ok_SCI_3289 
Improve large image saving after editing [SCI-3289]
 2019-04-03 16:44:08 +02:00
Oleksii Kriuchykhin
9e91e9e59d Improve large image saving after editing [SCI-3289] 2019-04-03 16:31:56 +02:00
Jure Grabnar
f00f4d39af Refactor step activities using position_plus_one 
Closes SCI-3273
 2019-04-03 13:10:45 +02:00
Jure Grabnar
26848ecaef Refactor step position + 1 into a method 2019-04-03 13:07:30 +02:00
Alex Kriuchykhin
bfd275c313
Merge pull request #1632 from okriuchykhin/ok_SCI_3281 
Fix permission checks for file editing and make protocol preview files read only [SCI-3281]
 2019-04-03 11:39:59 +02:00
Jure Grabnar
6a9ef8b98d
Merge pull request #1633 from jbargu/jg_sci_3276 
Wrap user sign_in into rescue block [SCI-3276]
 2019-04-03 10:56:56 +02:00
aignatov-bio
e034a0c055
Fix bug with update protocol from repository and modal disable button [SCI-3284] (#1631) 
* Fix bug with update protocol from repository and modal disable button
 2019-04-03 09:18:18 +02:00
Jure Grabnar
91820ed9c1 Wrap sign_in user into begin/rescue block 
Closes SCI-3276
 2019-04-03 09:09:20 +02:00
Oleksii Kriuchykhin
c47d243b1f Disable WOPI edit button in read only mode [SCI-3281] 2019-04-02 17:45:26 +02:00
Oleksii Kriuchykhin
ffa7c5ecb2 Fix permition checks for file editing and make protocol preview files read only [SCI-3281] 2019-04-02 16:38:53 +02:00
Anton Ignatov
94efd2e649 Fix tests 2019-04-02 16:04:50 +02:00
Urban Rotnik
86ddbc68b6 fixup! Show date actual value without link 2019-04-02 14:21:06 +02:00
Anton Ignatov
c9f9523210 Remove src when save description and rename token tag 2019-04-02 13:41:32 +02:00
Urban Rotnik
8eaeeee9f8 Show date actual value without link 2019-04-02 13:15:34 +02:00
aignatov-bio
e6102c72c7
Adding missed activities [SCI-3253] (#1614) 
* Adding missed activties

* Adding test for activities
 2019-04-02 11:50:37 +02:00
aignatov-bio
e93b0c3109
Adding preload filters for global activities [SCI-3254] (#1619) 
* Adding preload filter for global activities

* Adding link to task activities
 2019-04-02 11:14:36 +02:00
Jure Grabnar
e165459ef5
Merge pull request #1574 from jbargu/jg_sci_3149_3163 
Valid smart annotation links of smart annotation imported within protocol [SCI-3149, 3163]
 2019-04-01 14:32:54 +02:00
Mojca Lorber
3c69225d6b Change activities for task protocols 2019-03-29 15:09:20 +01:00
Oleksii Kriuchykhin
7d4fbcb32e Fix unconfirmed users clean-up issues [SCI-3172] 2019-03-29 11:11:53 +01:00
Alex Kriuchykhin
913bdd91be
Merge pull request #1610 from okriuchykhin/ok_SCI_3251 
Make subject search more precise in global activities [SCI-3251]
 2019-03-29 09:28:13 +01:00
aignatov-bio
b51dcc9d75
Adding children selector to global activities subjects [SCI-3247] (#1605) 
* Adding children selector to global activities subjects

* Fix naming, add seperate check for project id
 2019-03-29 09:26:27 +01:00
Alex Kriuchykhin
88b4ca0798
Merge pull request #1609 from okriuchykhin/ok_SCI_3213 
Fix role name in change user role in team activity [SCI-3213]
 2019-03-28 17:32:51 +01:00
Alex Kriuchykhin
9137740266
Merge pull request #1607 from okriuchykhin/ok_SCI_3229 
Fix links for archived objects in global activities [SCI-3229][SCI-3241]
 2019-03-28 17:32:24 +01:00
Oleksii Kriuchykhin
58af23e9b5 Make subject search more precise in global activities [SCI-3251] 2019-03-28 17:03:05 +01:00
Oleksii Kriuchykhin
6bc944fcc7 Fix role name in change user role in team activity [SCI-3213] 2019-03-28 16:26:07 +01:00
Oleksii Kriuchykhin
d7d45bec70 Fix links for archived objects in global activities [SCI-3229] 2019-03-28 13:43:50 +01:00
mlorb
5f663b3c74
Merge pull request #1600 from mlorb/ml-sci-3215 
Implement missing tests for global activities [SCI-3215][SCI-3219]
 2019-03-28 11:10:38 +01:00
aignatov-bio
08263ab64e
adding filters for task activities [SCI-3076] (#1553) 
* update task activity screen
 2019-03-28 10:55:48 +01:00
aignatov-bio
8416d1ab1c
Merge branch 'master' into ai-sci-3239-add-localization-team-for-objects 2019-03-28 09:13:34 +01:00
Jure Grabnar
07609d34c8 User/teams are now alphabetically listed 2019-03-27 15:34:01 +01:00
Anton Ignatov
3676aeb83c Adding localization to subjects group name in filters 2019-03-27 15:30:04 +01:00
Mojca Lorber
f06358b2ae Implement missing tests for global activities (task and protocol activities) 2019-03-27 11:24:44 +01:00
Oleksii Kriuchykhin
dab75d5aec Fix duplicated projects in new report modal [SCI-3173] 2019-03-26 17:24:30 +01:00
Oleksii Kriuchykhin
2ff43a3320 Change filtering logic when no filters are selected [SCI-3223] 2019-03-26 16:04:03 +01:00
Alex Kriuchykhin
935e3a65cf
Merge pull request #1586 from okriuchykhin/ok_SCI_3199 
Fix multiple bugs in global activities [SCI-3197][SCI-3199][SCI-3213][SCI-3225]
 2019-03-26 16:02:44 +01:00
Miha Mencin
9a30d7be9d SCI-3232 renaming the attribute name so it doesnt get 'constantized' 2019-03-26 11:39:54 +01:00
Oleksii Kriuchykhin
e3a3ec4491 Fix multiple bugs in global activities [SCI-3197][SCI-3199][SCI-3213][3225] 2019-03-25 17:38:13 +01:00
Miha Mencin
4a87216a3d
Merge branch 'master' into features/global-activities 2019-03-25 14:35:24 +01:00
aignatov-bio
9fff93ab0e
Merge pull request #1576 from biosistemika/image-editor-prototype 
Feature/Image annotation
 2019-03-22 16:31:00 +01:00
Anton Ignatov
65521533b4 change js.erb to js 2019-03-22 13:35:11 +01:00
Anton Ignatov
4ec0a3c871 Update TinyMCE image loader for new fields 2019-03-22 10:52:26 +01:00
Anton Ignatov
bc58f0aecd Merge branch 'features/note-section' into ai-sci-3131-improve-image-file-upload 2019-03-21 11:48:51 +01:00
Mojca Lorber
c55e314ed5 Refactor upon the review requests 2019-03-20 21:34:47 +01:00
Anton Ignatov
55c93922ea markup fixes 2019-03-20 14:46:54 +01:00
Anton Ignatov
07c2819163 refactoring tinymce image uploading 2019-03-20 14:46:54 +01:00
Oleksii Kriuchykhin
0c2b7959b6 Fix smart annotations in RTE [SCI-3111] 2019-03-20 11:41:36 +01:00
Mojca Lorber
4f9814b884 Merge branch 'features/global-activities' of github.com:biosistemika/scinote-web into ml-sci-3021 2019-03-20 11:03:00 +01:00
Jure Grabnar
cf5505d95f Add missing inventory name in notification 
Closes SCI-3149
 2019-03-20 10:52:58 +01:00
Anton Ignatov
29b67be127 Fix team selection in global activities and add link from navbar 2019-03-20 10:33:22 +01:00
Mojca Lorber
cd7a87348f Protocol activities refactoring, without tests 2019-03-19 16:12:07 +01:00
Mojca Lorber
c476816359 Task activities refactoring, without tests 2019-03-19 15:33:57 +01:00
Mojca Lorber
7757096693 Results activities refactoring 2019-03-19 15:33:57 +01:00
Mojca Lorber
1418abc8d7 Reports activities refactoring 2019-03-19 15:33:57 +01:00
Mojca Lorber
d1e38e5bc9 Project activities refactoring 2019-03-19 15:33:57 +01:00
Mojca Lorber
70eebca5ee experiment activities refactoring 2019-03-19 15:33:57 +01:00
aignatov-bio
6eae12efab
Updating permission check for image editing [SCI - 3153, 3159] (#1568) 
*Add permission check for assets editing

* Add check for image format
 2019-03-19 13:52:57 +01:00
Anton Ignatov
f606210652 Rubocop fix 2019-03-19 13:52:03 +01:00
Anton Ignatov
87280f083a [SCI-3166] Finalize global activities front end 2019-03-19 13:50:55 +01:00
aignatov-bio
a0a3c4b97f
Fix file format bug (#1569) 2019-03-19 11:06:36 +01:00
Oleksii Kriuchykhin
0c71493fdb Add viewing permissions for global activities [SCI-2997] 2019-03-18 15:38:19 +01:00
Urban Rotnik
5dccdbab17 fixup! Fix failing tests 2019-03-15 11:12:10 +01:00
Urban Rotnik
2ea2700837 fixup! Fix failing tests 2019-03-15 10:30:51 +01:00
Oleksii Kriuchykhin
a822227383 Add rich text editor to task and protocol description [SCI-3062][SCI-3071] 2019-03-14 16:27:33 +01:00
Oleksii Kriuchykhin
645930b8d7 Merge branch 'master' into features/note-section 2019-03-14 16:25:51 +01:00
Urban Rotnik
b6a8556601 Add activities for exporting Projects, Inventory items 2019-03-12 09:15:06 +01:00
Urban Rotnik
e7b57aa4f7 Add creating activities for Team actions 2019-03-12 09:15:06 +01:00
Urban Rotnik
3f18166320 Add Task and TaskTags activities 2019-03-12 09:15:06 +01:00
Urban Rotnik
7a05e817ef Add new Protocol steps activities 2019-03-12 09:15:06 +01:00
Urban Rotnik
b33e95e18a New Protocols actions logging 2019-03-12 09:14:53 +01:00
Urban Rotnik
cfe2888bea Repository columns actions loggin 2019-03-12 09:11:00 +01:00
Urban Rotnik
32422c00eb RepositoryRows actions loggin 2019-03-12 09:11:00 +01:00
Urban Rotnik
2a7bbac733 Repository actions logging 2019-03-12 09:11:00 +01:00
Urban Rotnik
976831e7d3 Edit and Archive experiment activity logging 2019-03-12 09:11:00 +01:00
Oleksii Kriuchykhin
feb75f62e1 Add workaround for image caching in fabric js [SCI-2855] 2019-03-11 15:10:32 +01:00
Oleksii Kriuchykhin
80e525fd97 Improve image editor behaviour [SCI-2855] 2019-03-11 15:09:49 +01:00
Oleksii Kriuchykhin
89e968c410 Add tui.image-editor [SCI-2815] 2019-03-11 15:08:15 +01:00
Urban Rotnik
9ed3313f0f Create project activity refactored 2019-03-11 08:36:15 +01:00
Jure Grabnar
eceda4909f Move edit_file permission for wopi file in a special function 
Used for overwritting it in addons.

Closes SCI-2949
 2019-03-08 12:22:35 +01:00
aignatov-bio
ec2dbb897f
Adding side pane filter and top pane tags [SCI - 3008, 3009, 3010, 3011, 3012, 3018, 3019, 3020] (#1521) 
* Adding side pane filtering and top pane
 2019-03-06 10:34:04 +01:00
aignatov-bio
125d2a3b9b
New inline tags editing in task [SCI 3093] (#1529) 
* Adding inline tags selection
 2019-03-06 09:18:45 +01:00
aignatov-bio
b1df8c9aa7
Adding inline editing to experiment title, project title and task title [SCI-3059] (#1524) 
* Adding inline editing to experiment title, project title and task title
 2019-03-06 09:17:34 +01:00
Miha Mencin
9807c80286 move the create action to the tope section of controller 2019-03-05 10:49:36 +01:00
Miha Mencin
67fe486874 put the scheduling logic into session create action 2019-03-05 10:43:39 +01:00
Miha Mencin
fa7bba9de7 scheduling creation of demo project at the sign in time 
remove wrong schema, fix comment, add migration
 2019-03-04 18:26:15 +01:00
Miha Mencin
844303ae7c SCI-3119 schedule the creaton of template 2019-03-01 17:47:04 +01:00
Oleksii Kriuchykhin
61147b480c Add main global activities bussiness logic [SCI-3014] 2019-02-26 11:01:15 +01:00
Urban Rotnik
3ad6cee766 Fix tests, remove nullable field 2019-02-25 16:50:38 +01:00
Miha Mencin
76c3db0b11 added layout, added css, added select2 lib, WIP 2019-02-25 16:50:38 +01:00
Miha Mencin
bcd0b433b6
Merge pull request #1514 from biosistemika/features/system-notifications 
Features/system notifications
 2019-02-21 16:38:58 +01:00
aignatov-bio
5f78d83f9c
Changing status from unread to read system notification is not correct one [SCI-3077 and SCI-3075] (#1513) 
* fix dropdown apperance

* Remove search and fix duplicate bug

* Fix specs for new method
 2019-02-21 16:15:13 +01:00
aignatov-bio
fcdb4e7a92
Merge pull request #1500 from biosistemika/features/system-notifications 
Features/system notifications
 2019-02-19 13:51:18 +01:00
aignatov-bio
8e905b67b2
System notification navbar menu drop down [SCI 2955] (#1498) 
* Add dropdown menu and icon for system notifications
* Finish system notification dropdown menu and add tests
 2019-02-19 11:08:59 +01:00
aignatov-bio
c598541e09
System notification modal window [SCI-2957 and SCI-2958] (#1484) 
* Added new system notification modal

* Adding loading system notification on sign in
 2019-02-15 13:07:29 +01:00
mlorb
71e4cc4dbd
Merge branch 'master' into ml-sci-2940 2019-02-13 14:35:03 +01:00
aignatov-bio
5c85595ab4
System Notifications - View All Page [SCI-2956 and SCI-3001] (#1482) 
* System notification view and notification partial (SCI 2956 and SCI 3001)
 2019-02-13 13:06:14 +01:00
Oleksii Kriuchykhin
3376fd012c Improve error loggin in protocol import [SCI-3023] 2019-02-07 14:00:24 +01:00
Urban Rotnik
6f7fcb0831 Refactor method clone_experiment_as_template into service object 
[SCI-2925]
 2019-01-31 07:13:40 +01:00
mz3944
2ae56eb13f
Merge pull request #1448 from mz3944/mz-SCI-2929 
Can not switch team [SCI-2929]
 2019-01-31 04:43:39 +01:00
Urban Rotnik
4cf12d12d1 Refactor 'move_experiment' method into service object 
Jira Ticket: SCI-2926
 2019-01-28 11:45:36 +01:00
Urban Rotnik
16e9a56874 Add recaptcha to invitation modal 
SCI-2935
 2019-01-25 11:27:01 +01:00
Urban Rotnik
247bae8a9f Refactor export_all_counter increasing/reseting logic 
- Remove daily task
- Add method to user Model
 2019-01-25 11:16:31 +01:00
Mojca Lorber
fa1dff6352 refactor Demo project generation 2019-01-24 13:40:53 +01:00
mz3944
f6c8af105d
Merge pull request #1434 from mz3944/mz-SCI-2903 
Fix (unite) Date and Time display formats [SCI-2903]
 2019-01-21 09:50:34 +01:00
Miha Mencin
0766ee96a7
Merge pull request #1447 from okriuchykhin/ok_SCI_2875_v2 
Fix task tags update on canvas cards [SCI-2875]
 2019-01-16 12:44:50 +01:00
Oleksii Kriuchykhin
3a4b992f4e Code style fixies []SCI-2875] 2019-01-14 16:31:23 +01:00
Matej Zrimšek
a5c1cf4450 Switch user's team if he's no longer a member of the currently selected one 2019-01-12 23:39:31 +01:00
Oleksii Kriuchykhin
89240659a7 Fix task tags update on canvas cards [SCI-2875] 2019-01-11 17:20:39 +01:00
Alex Kriuchykhin
b530cea771
Merge pull request #1438 from okriuchykhin/ok_SCI_2776 
Add counters to task inventories dropdown [SCI-2776]
 2019-01-11 16:27:22 +01:00
Oleksii Kriuchykhin
132f46b136 Improve error handling in task inventories dropdown [SCI-2776] 2019-01-10 21:11:20 +01:00
Matej Zrimšek
8070b7f8b5 Fix Date and Time display formats on JS side 2019-01-08 08:07:24 +01:00
Oleksii Kriuchykhin
534866467b Add counters to task inventories dropdown [SCI-2776] 2019-01-03 14:11:00 +01:00
Oleksii Kriuchykhin
2769add4d9 Disable edit button for unsupported WOPI formats [SCI-2904] 2018-12-31 18:10:12 +01:00
Alex Kriuchykhin
8a348b8504
Merge pull request #1422 from okriuchykhin/ok_SCI_2910 
Improve rendering speed of inventory table [SCI-2910]
 2018-12-16 19:45:29 +01:00
Oleksii Kriuchykhin
d5c07fd22a Improve rendering speed of inventory table [SCI-2910] 2018-12-13 16:17:22 +01:00
Oleksii Kriuchykhin
311189a2e9 Replace reports materialized view with normal queries and re-enable fragment caching [SCI-2894] 2018-12-13 11:18:09 +01:00
Alex Kriuchykhin
4e416fe81b
Merge pull request #1404 from okriuchykhin/ok_SCI_2822 
Return task inputs/outputs as references [SCI-2822]
 2018-12-12 11:36:39 +01:00
mlorb
3f79cc5f93
Merge pull request #1418 from mlorb/ml-sci-2905 
Fix due date can not be set [SCI-2905]
 2018-12-12 11:27:57 +01:00
mlorb
426fadc10a Fix due date can not be set 2018-12-11 10:31:13 +01:00
mlorb
4040b31143 Fix behavior when user has no teams 2018-12-10 15:42:05 +01:00
Alex Kriuchykhin
37db41e18e
Merge pull request #1405 from okriuchykhin/ok_SCI_2881 
Refresh sidebar when project is archived/restored [SCI-2881]
 2018-12-10 14:11:34 +01:00
Oleksii Kriuchykhin
2c96f08b98 Refresh sidebar when project is archived/restored [SCI-2881] 2018-11-29 14:20:20 +01:00
Oleksii Kriuchykhin
5b566b48ae Improve error messages and fix task users/items endpoints [SCI-2886] 2018-11-28 14:14:45 +01:00
Oleksii Kriuchykhin
b3a377f949 Return task inputs/outputs as references [SCI-2822] 2018-11-28 11:33:00 +01:00
Alex Kriuchykhin
20e2cbf0ca
Merge pull request #1391 from okriuchykhin/ok_SCI_2880 
Fix smart annotations rendering issues [SCI-2880]
 2018-11-28 09:47:20 +01:00
mlorb
398c2f0576
Merge pull request #1392 from mlorb/ml-sci-2676 
Hide sign-in with third party applications (e.g. LinkedIn) in Oauth… [SCI-2676]
 2018-11-27 11:06:45 +01:00
mlorb
0b6b3b3609 code simplify 2018-11-27 10:58:51 +01:00
Oleksii Kriuchykhin
d67abfda2c Additional fixies for smart annotations [SCI-2880] 2018-11-26 15:17:18 +01:00
Jure Grabnar
7812f70c2f
Merge pull request #1393 from jbargu/jg_2790_protocolsio_fix 
Protocols - import from protocols.io doesn't work
 2018-11-26 14:56:25 +01:00
mlorb
18d9ab5888 fixes upon @Ducz0r request 2018-11-26 14:23:26 +01:00
Jure Grabnar
6ec2c99a28 Hound styling 2018-11-26 13:52:01 +01:00
Jure Grabnar
0086e4dcf3 Catch some of templates error when import protocols.io 2018-11-26 13:43:05 +01:00
Jure Grabnar
1c7a051551 Catch all errors on PIO import and show message 2018-11-23 20:47:48 +01:00
mlorb
f61187dd18 Hide sign-in with third party applications (e.g. LinkedIn) in Oauth flows 2018-11-23 15:44:04 +01:00
Oleksii Kriuchykhin
5deaf25fd9 Prevent user being added to project/task multiple times [SCI-2869] 2018-11-20 14:29:33 +01:00
Alex Kriuchykhin
a6bc02a2cb
Merge pull request #1369 from okriuchykhin/ok_SCI_2830 
Refactor result and step comments [SCI-2830]
 2018-11-20 00:13:15 +01:00
mlorb
3b96a60938
Merge pull request #1374 from mlorb/ml-sci-2842 
Update the Export all confirmation modal and export interaction [SCI-2842]
 2018-11-19 11:36:08 +01:00
Alex Kriuchykhin
d524a1d508
Merge pull request #1364 from okriuchykhin/ok_SCI_2778 
Add time format selection to settings [SCI-2778]
 2018-11-19 10:17:09 +01:00
mlorb
4b540958bd change close/cancel button and refactor export_project_modal endpoint 2018-11-16 13:37:32 +01:00
mlorb
6453ab6fb1 update the Export all confirmation modal and export interaction 2018-11-15 15:53:58 +01:00
Luka Murn
e9c0b34662 Merge branch 'core-api' into 'master' 
Conflicts:
	Gemfile
	app/services/api.rb
	config/initializers/api.rb
	config/initializers/extends.rb
	config/routes.rb
	db/schema.rb
	spec/controllers/api/api_controller_spec.rb
 2018-11-14 16:59:04 +01:00
Oleksii Kriuchykhin
3fd687161f Remove unused variables from activities controller [SCI-2778] 2018-11-14 13:17:38 +01:00
Oleksii Kriuchykhin
537de596a7 Merge latest master [SCI-2778] 2018-11-14 13:05:57 +01:00
Luka Murn
c0940b143a Fix root page bug introduced with merge features/core-api -> master 2018-11-13 21:24:20 +01:00
Oleksii Kriuchykhin
fb309a12b9 Refactor result and step comments initialization [SCI-2830] 2018-11-13 16:57:42 +01:00
Luka Murn
84df2c81f9 Merge branch 'features/export-all' 
Conflicts:
	app/controllers/experiments_controller.rb
	app/controllers/my_modules_controller.rb
	db/schema.rb
 2018-11-13 09:14:02 +01:00
Oleksii Kriuchykhin
e89d60785f Fix dates on activities and experiments [SCI-2778] 2018-11-12 10:26:48 +01:00
Oleksii Kriuchykhin
8d0dbc7076 Add time format selection to settings [SCI-2778] 2018-11-09 16:19:40 +01:00