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6013 commits 31 branches 181 tags 166 MiB
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44 commits

Author SHA1 Message Date
Urban Rotnik
795c355f01
Merge pull request #1915 from urbanrotnik/ur-sci-3531-tests-for-step-components 
Add tests for StepComponents [SCI-3531]
 2019-07-15 13:25:36 +02:00
Jure Grabnar
015dae1a05 Fix old tests 2019-07-15 08:27:34 +02:00
Jure Grabnar
a372d4056d Add last_published protocols.io endpoint 2019-07-14 19:24:53 +02:00
Urban Rotnik
5cf100a787 Show 'published_on' instead of 'created_on' on external_protocols list 2019-07-12 16:56:07 +02:00
Urban Rotnik
b9bec32316 Add tests for StepComponents 2019-07-10 12:48:08 +02:00
Urban Rotnik
cc3cd43270 Log to console when error occur on ProtocolsImport actions 2019-07-09 15:32:43 +02:00
Urban Rotnik
10639deb97 Strip tags for table's content 2019-07-09 13:41:52 +02:00
Urban Rotnik
be77746aef Fix description styling of components 2019-07-09 13:41:51 +02:00
Urban Rotnik
8411e92fa2 Add linebreak for 'There was a table' message 2019-07-09 10:54:48 +02:00
Jure Grabnar
05f2210002
SCI-3650, SCI-3655 Fix empty file name, empty description when… (#1892) 
SCI-3650, SCI-3655 Fix empty file name, empty description when parsing tables
 2019-07-09 10:24:03 +02:00
Jure Grabnar
dc7fee51fa Add Show more protocols functionality to external protocols 
Closes SCI-3646
 2019-07-04 15:35:18 +02:00
Jure Grabnar
721bb9ab77
SCI-3649 All reagent data from step are not imported (#1881) 
SCI-3649 All reagent data from step are not imported
 2019-07-03 16:54:25 +02:00
Jure Grabnar
6944045bfb Check for empty description before passing to Nokogiri 
Closes SCI-3655
 2019-07-03 16:36:26 +02:00
Jure Grabnar
8866d98512 Fix empty file name on protocols.io 
Closes SCI-3650
 2019-07-03 16:11:51 +02:00
Jure Grabnar
4715e8ec4b Fix building of zero steps protocls 
Close SCI-3648
 2019-07-03 09:34:15 +02:00
Miha Mencin
611c417b43 code review changes 2019-07-03 09:21:41 +02:00
Miha Mencin
ab038ffdf7 SCI-3649 adding catalog number, fixing up the design a bit 2019-07-02 19:47:05 +02:00
Jure Grabnar
ebbb36cc6d Remove border from the import button 2019-06-28 11:32:47 +02:00
Jure Grabnar
8146a6a42c Assign name = position if protocolsIO step has no name 2019-06-28 11:29:03 +02:00
Jure Grabnar
c10428cd2a Fix sorting buttons not applying params 2019-06-28 08:55:27 +02:00
Jure Grabnar
9be4fc2470 Fix tests 2019-06-28 02:19:06 +02:00
Jure Grabnar
0a77cedaf8 Fix sorting of external protocols and start showing results 2019-06-27 22:48:56 +02:00
Urban Rotnik
9cb4454537 New implementation for attachments creation 2019-06-27 17:02:06 +02:00
Jure Grabnar
82fb8ebd2e
Implement protocols.io error handling (#1869) 
Implement protocols.io error handling
 2019-06-27 16:35:55 +02:00
Jure Grabnar
06b8d1fda7 Update ApiClient tests 
Closes SCI-3434
 2019-06-27 14:54:19 +02:00
Jure Grabnar
8a7a2eb097 Add StandardError checking for ProtocolNormalizer 2019-06-27 10:12:00 +02:00
Jure Grabnar
86bc69e510 Simplify V3 errors structure 2019-06-27 09:42:21 +02:00
Mojca Lorber
9fd83d54a0 Put network error handeling into api and refactor errors 2019-06-26 14:04:03 +02:00
Urban Rotnik
bf6041e13d Update sanitization of html descriptions 2019-06-19 11:05:22 +02:00
Urban Rotnik
7e69375016 Drop header column and row when extract tables 2019-06-19 10:47:38 +02:00
Urban Rotnik
2a579f2240 Add Warnings, Before start and Guidelinese to protocol description 2019-06-19 09:02:42 +02:00
Mojca Lorber
ebcaa4b014 Implement protocols.io error handling for api client and normalizer 2019-06-18 14:01:57 +02:00
Urban Rotnik
7fad5fc594 Add search service and normalizer for list 2019-06-17 12:24:15 +02:00
Jure Grabnar
362b0cd45d Hound fixes 2019-06-17 12:24:11 +02:00
Jure Grabnar
640f6c1211 Fix tests after BuildProtocolFromClientService refactor 
Closes SCI-3544
 2019-06-17 12:24:11 +02:00
Jure Grabnar
1e8627c450 Refactor ImportProtocol service to BuildProtocolService 
Closes SCI-3544
 2019-06-17 12:24:10 +02:00
Urban Rotnik
2bb4f558b7 View rendering simplified, small improvements 2019-06-17 12:24:09 +02:00
Urban Rotnik
807104035c Add StepBuilder, TableBuilder, AssetBuilder for PIO, normalized updated 2019-06-17 12:24:09 +02:00
Urban Rotnik
6a4deb0201 Add ProtocolIntermediateObject 2019-06-17 12:24:09 +02:00
Urban Rotnik
aadf2eecb4 Basic data normalizer for ProtocolIO 2019-06-17 12:24:08 +02:00
Urban Rotnik
ec49388283 Add protocol base normalizer class 2019-06-17 12:24:08 +02:00
Jure Grabnar
c1cee07a63 Extract API client constants to constants.rb 2019-06-17 12:24:08 +02:00
Jure Grabnar
a15b1f6dfa Add logging for ApiClient and fix hound formatting 2019-06-17 12:24:08 +02:00
Jure Grabnar
5685709f48 Implement API client for protocols.io 
Closes SCI-3357
 2019-06-17 12:24:07 +02:00