Commit graph

1842 commits

Author SHA1 Message Date
okriuchykhin
71dc6921fb Merge pull request #524 from okriuchykhin/ok_SCI_1046
Add team_id field to assets and tables [SCI-1046]
2017-03-24 14:48:16 +01:00
Oleksii Kriuchykhin
d2c8e9a395 Set team for assets and tables in generators [SCI-1046] 2017-03-24 14:46:20 +01:00
Zmago Devetak
804fb2fec9 Merge pull request #519 from ZmagoD/zd_SCI_1092_v2
adds hooks in team switch [fixes SCI-1092]
2017-03-24 12:56:52 +01:00
zmagod
b352ef1600 removed unneeded method 2017-03-24 12:53:33 +01:00
zmagod
023b3213e8 fixes email link [fixes SCI-765] 2017-03-24 12:10:07 +01:00
zmagod
94732c6d18 adds delayed zip generator 2017-03-23 15:45:02 +01:00
Oleksii Kriuchykhin
2edebb282a Add team_id field to assets and tables [SCI-1046] 2017-03-23 10:36:55 +01:00
zmagod
4385c68f5f adds zip_export utility first run 2017-03-21 16:15:11 +01:00
okriuchykhin
33544ec91d Merge pull request #521 from okriuchykhin/ok_SCI_1087
Move flash message creation JS code to helper method [SCI-1087]
2017-03-20 15:35:21 +01:00
Zmago Devetak
38299d9f67 Merge pull request #522 from ZmagoD/zd_SCI_1111
fixes breadcrumbs in office file [fixes SCI-1111]
2017-03-20 13:53:29 +01:00
zmagod
d8955d1a78 fixes breadcrumbs in office file [fixes SCI-1111] 2017-03-20 13:48:45 +01:00
Oleksii Kriuchykhin
c715902058 Move flash message creation JS code to helper method [SCI-1087] 2017-03-17 17:58:53 +01:00
Mojca Lorber
83fa8570d7 refactoring 2017-03-17 17:52:15 +01:00
zmagod
c244e69e81 fixed report comments bug [fixes SCI-1100] 2017-03-17 16:59:40 +01:00
zmagod
5cc6cd094e refactor 2017-03-17 16:47:58 +01:00
zmagod
95a0f596b7 adds file link 2017-03-17 16:40:57 +01:00
zmagod
70f17a924e adds hooks in team switch [fixes SCI-1092] 2017-03-17 16:10:22 +01:00
zmagod
52878e0989 fixed wopi buttons [fixes SCI-1110] 2017-03-16 15:38:11 +01:00
zmagod
307fef17d8 fixes owner id if empty 2017-03-15 18:01:15 +01:00
Zmago Devetak
1afb4c9a42 Merge pull request #515 from ZmagoD/file_owner_id_bug
fixes bug with wopi contorller
2017-03-15 17:40:07 +01:00
zmagod
c5156f5ca3 fixes bug with wopi contorller 2017-03-15 17:33:36 +01:00
Mojca Lorber
4792bd87b9 fix error message when editing custom column on locked task 2017-03-15 14:09:44 +01:00
Mojca Lorber
7a4e3201e7 add error messages to sample group/type edit/delete actions 2017-03-14 17:32:25 +01:00
zmagod
5d372851d3 fixes reports comment bug [fixes SCI-1100] 2017-03-14 16:24:02 +01:00
zmagod
856a4611c6 Merge branch 'master' of https://github.com/biosistemika/scinote-web into zd_SCI_1003_add_extends 2017-03-14 15:58:08 +01:00
zmagod
15b1712a3d fixes bug with organization 2017-03-14 13:29:59 +01:00
zmagod
b821fff4a5 adds non breaking space between file name and buttons 2017-03-13 14:14:44 +01:00
zmagod
df2abe5d17 fixed typo 2017-03-13 13:51:31 +01:00
zmagod
7b16e5643e fix assets preprocesor for wopi files 2017-03-13 13:20:49 +01:00
zmagod
0c2523beca Merge branch 'master' of https://github.com/biosistemika/scinote-web into office_integration 2017-03-10 16:21:43 +01:00
mlorb
39e1ac4b26 Merge pull request #512 from biosistemika/ml_sci_1074
Fix permissions for experiment actions [SCI-1074]
2017-03-10 11:44:27 +01:00
okriuchykhin
2a33391f4b Merge pull request #511 from okriuchykhin/ok_SCI_1090
Refactoring of the comments using STI [SCI-1090]
2017-03-10 10:50:43 +01:00
Mojca Lorber
1ba5f1748f fix permissions for experiment actions 2017-03-09 17:45:34 +01:00
Oleksii Kriuchykhin
456934464a Remove unneeded validation calls [SCI-1090] 2017-03-09 17:20:27 +01:00
zmagod
1d42d46c02 fixes bug with step comments 2017-03-09 16:02:52 +01:00
Luka Murn
ae96223437 Fix rake db:add_user task 2017-03-09 15:37:15 +01:00
zmagod
3057965940 fix bug with filenames 2017-03-09 11:48:50 +01:00
zmagod
9939d8df06 refactor 2017-03-09 10:51:54 +01:00
Luka Murn
1e3a697a91 Merge pull request #508 from biosistemika/lm-sci-838-fix
Open edit/view Office files in new browser tab/window [SCI-838]
2017-03-09 10:39:16 +01:00
zmagod
49f91184da fixes locals 2017-03-09 09:55:15 +01:00
Luka Murn
a4bf5516a5 Merge pull request #505 from Ducz0r/lm-sci-1082-fix
Minor change [SCI-1082]
2017-03-09 08:58:14 +01:00
Luka Murn
0e8f5f8e99 Merge branch 'lm-sci-1091-fix' of https://github.com/Ducz0r/scinote-web into Ducz0r-lm-sci-1091-fix
Conflicts:
	app/views/my_modules/_state_buttons.html.erb
2017-03-09 08:44:09 +01:00
zmagod
f78ef8c82a fixes hound 2017-03-08 14:41:42 +01:00
zmagod
5c2e9a4b04 adds extends and fixes report methods 2017-03-08 14:14:03 +01:00
Luka Murn
800df7a26b Also make button icons work when rendering them via JS
Closes SCI-1073.
2017-03-08 13:55:10 +01:00
Oleksii Kriuchykhin
0f8336e5a5 Refactoring of the comments using STI [SCI-1090] 2017-03-08 13:18:20 +01:00
Luka Murn
7c9aa2e476 Hide complete&uncomplete task buttons if user cannot do it
Closes SCI-1091.
2017-03-06 16:01:04 +01:00
Luka Murn
86a800a84e Open edit/view Office files in new browser tab/window
Closes SCI-838.
2017-03-06 14:12:18 +01:00
Luka Murn
473487faec Add HTML <head><title> to edit, view file pages
Closes SCI-1049.
2017-03-06 13:55:07 +01:00
Luka Murn
4ddb139911 Fix padding of state buttons
Closes SCI-1073.
2017-03-03 16:36:52 +01:00
Luka Murn
42b773f180 Merge pull request #504 from Ducz0r/lm-sci-1078-fix
Fix sample type groups edit color script [SCI-1078]
2017-03-02 13:09:51 +01:00
Luka Murn
043613782e Minor change 2017-03-02 13:04:13 +01:00
Luka Murn
808fdf6744 Merge pull request #502 from Ducz0r/lm-sci-1073-fix
Fix protocol state buttons a bit [SCI-1073]
2017-03-02 09:02:52 +01:00
Luka Murn
7a48da2e94 Merge pull request #501 from Ducz0r/lm-sci-1057-fix
Canvas should now properly work again [SCI-1057]
2017-03-02 09:01:51 +01:00
Luka Murn
3599537e42 Fix sample type groups edit color script so it works properly now
Closes SCI-1078.
2017-03-01 09:09:44 +01:00
Oleksii Kriuchykhin
4868ec5331 Remove task completion duplicated code [SCI-1075] 2017-02-28 17:07:59 +01:00
Luka Murn
3d7f09bde6 Fix protocol state buttons a bit
Closes SCI-1073.
2017-02-28 14:35:12 +01:00
Luka Murn
2252b46afc Canvas should now properly work again
Closes SCI-1057.
2017-02-28 10:41:55 +01:00
zmagod
e1b3dcc2ba adds enum extends to report element part of SCI-1003 2017-02-27 13:53:46 +01:00
Luka Murn
fecfc9e41d Merge pull request #498 from biosistemika/release-1.8.1
Release 1.8.1
2017-02-23 14:57:30 +01:00
Luka Murn
dc89c160be Fix a bug with team page not working from user task modal 2017-02-23 14:45:00 +01:00
Luka Murn
87599dca88 Merge branch 'lm-sci-1026-fix' into release-1.8.1 2017-02-23 13:55:41 +01:00
mlorb
a72a072fac Merge pull request #495 from mlorb/ml_sci_948
Fix report - checklist items are in separate row than checkboxes [SCI-948]
2017-02-23 10:50:48 +01:00
okriuchykhin
986ad051a1 Merge pull request #496 from okriuchykhin/ok_SCI_873
Improve image scaling in image preview [SCI-873]
2017-02-23 09:30:56 +01:00
Oleksii Kriuchykhin
cb588ed378 Improve image scaling in image preview [SCI-873] 2017-02-22 16:55:57 +01:00
okriuchykhin
d30e149936 Merge pull request #493 from okriuchykhin/ok_SCI_739
Lower z-index value for notification count icon [SCI-739]
2017-02-22 16:48:39 +01:00
okriuchykhin
75792cde14 Merge pull request #492 from okriuchykhin/ok_SCI_759
Add more extensive explanation when project name is already taken [SCI-759]
2017-02-22 16:25:16 +01:00
Mojca Lorber
f84611f558 fix report - checklist items are in separate row than checkboxes 2017-02-22 15:51:26 +01:00
Oleksii Kriuchykhin
a326fa374f Lower z-index value for notification count icon [SCI-739] 2017-02-22 14:35:07 +01:00
Zmago Devetak
58f97fdb5b Merge pull request #489 from ZmagoD/zd_SCI_1002_add_hook
adds hook for lock task action
2017-02-22 14:24:01 +01:00
Oleksii Kriuchykhin
35b0b33ddf Add more extensive explanation when project name is already taken [SCI-759] 2017-02-22 14:18:48 +01:00
mlorb
b65c716b79 Merge pull request #491 from biosistemika/ml_sci_1028_v2
Fix repeat tutorial is always created on the same team [SCI-1028]
2017-02-22 13:52:46 +01:00
Mojca Lorber
330fe9c291 fix repeat tutorial is always created on the same team
Closes SCI-1028.
2017-02-22 13:43:03 +01:00
mlorb
42e6a99911 Merge pull request #487 from mlorb/ml_sci_1032
Fix visual bug in edit avatar mode [SCI-1032]
2017-02-22 10:59:18 +01:00
mlorb
8c111db31a Merge pull request #486 from mlorb/ml_sci_1033
Fix user has no teams view [SCI-1033]
2017-02-22 10:58:39 +01:00
zmagod
151dc79a81 adds hook for lock task action 2017-02-21 16:25:50 +01:00
Mojca Lorber
ac0988ef32 add data-hooks for remove manage teams button 2017-02-21 15:39:08 +01:00
Mojca Lorber
0fd41e8a6d remove changes on user has no teams view 2017-02-21 15:12:58 +01:00
Oleksii Kriuchykhin
53ba9437b2 Fix circular dependency while loading Settings [SCI-1004] 2017-02-21 14:38:13 +01:00
mlorb
ea1711be83 Merge pull request #485 from mlorb/ml_sci_1001
Add data-hook for E-signature manifestation/display [SCI-1001]
2017-02-21 14:25:08 +01:00
mlorb
01d9f306a5 change div to span 2017-02-21 14:22:28 +01:00
Mojca Lorber
6b30f097f0 fix visual bug in edit avatar mode 2017-02-21 14:02:42 +01:00
okriuchykhin
95af5001ab Merge pull request #484 from okriuchykhin/ok_SCI_1004
Add global settings base class [SCI-1004]
2017-02-21 13:20:24 +01:00
Mojca Lorber
90864a45a0 fix user has no teams view 2017-02-21 13:08:06 +01:00
Oleksii Kriuchykhin
7703db3386 Change implementation of the Settings base class [SCI-1004] 2017-02-21 13:07:10 +01:00
Luka Murn
6f1c19ae2d Fix _user_dropdown.html.erb 2017-02-21 09:27:42 +01:00
Mojca Lorber
cb2127ee7f add data-hook for E-signature manifestation/display 2017-02-20 18:03:55 +01:00
okriuchykhin
8e18ff44a6 Merge pull request #479 from okriuchykhin/ok_SCI_999
Add task complete/uncomplete functionality [SCI-999]
2017-02-20 15:19:00 +01:00
Oleksii Kriuchykhin
2aba0f46a6 Add global settings base class [SCI-1004] 2017-02-20 15:11:57 +01:00
Luka Murn
573f3c8d42 Merge pull request #483 from Ducz0r/lm-sci-1026-fix
Fix manage project users modal bug [SCI-1026]
2017-02-20 08:22:03 +01:00
Luka Murn
ce617894c5 Fix manage project users modal bug
Closes SCI-1026.
2017-02-16 15:29:58 +01:00
Oleksii Kriuchykhin
4fb5fa79af Move task completion activity and notification creation to separate methods [SCI-999] 2017-02-16 13:36:05 +01:00
Oleksii Kriuchykhin
218e96b1f0 Code style fixes [SCI-999] 2017-02-16 11:45:07 +01:00
Zmago Devetak
c963674e49 Merge pull request #482 from ZmagoD/zd_SCI_987_vol2
fixes bug with user teams table [fixes SCI-987]
2017-02-15 13:30:25 +01:00
Luka Murn
164bd787e9 Merge pull request #481 from Ducz0r/lm-sci-958-fix
Team administrators are Viewers of all Projects in Team [SCI-958]
2017-02-15 10:40:52 +01:00
zmagod
836baa7412 fixes bug with user teams table [fixes SCI-987] 2017-02-15 10:06:21 +01:00
Nbernot
97584aabb3 Updated the lists of office online file extensions
Extended the list of file extensions that receive office online icons and 'open in' text.
2017-02-14 16:44:03 +01:00
Luka Murn
d097f0dd15 Merge pull request #477 from Ducz0r/lm-sci-928
Refactor, merge, unify, improve, update, beautify settings page [SCI-928]
2017-02-13 16:42:57 +01:00
Luka Murn
1b6f50647c Please Hound 2017-02-13 16:40:27 +01:00
Luka Murn
b369177d1f Merge pull request #480 from Ducz0r/lm-sci-964-fix
Fix system notification email links not working bug [SCI-964]
2017-02-13 16:31:04 +01:00
Oleksii Kriuchykhin
f97c20e9b5 Fix hound warnings [SCI-999] 2017-02-13 15:42:28 +01:00
Oleksii Kriuchykhin
78d5cbb223 Add links to task completion notification [SCI-999] 2017-02-13 14:51:21 +01:00
Luka Murn
86be639a7c Please the Hound 2017-02-13 14:20:44 +01:00
Luka Murn
3313d14316 Fix search for administrators and projects
Closes SCI-958.
2017-02-13 14:15:53 +01:00
Luka Murn
c6ed73bc82 Allow team admins to see all projects, even hidden ones 2017-02-13 13:42:53 +01:00
Luka Murn
f93cc89624 Fix system notification email links not working bug
Closes SCI-964.
2017-02-10 15:13:33 +01:00
Oleksii Kriuchykhin
cf8566df33 Add task complete/uncomplete functionality [SCI-999] 2017-02-10 14:27:20 +01:00
Luka Murn
3eb4faa44b Fix task restore action
Closes SCI-991.
2017-02-10 14:08:56 +01:00
Luka Murn
280b7a0e75 Minor fix 2017-02-09 15:10:45 +01:00
Luka Murn
2a9f975c13 Some minor fixes 2017-02-09 14:58:11 +01:00
Luka Murn
f7bd62547e Refactor teams settings into its own controllers 2017-02-09 14:37:59 +01:00
Luka Murn
7bee3a4ea0 Move user profile to settings 2017-02-09 11:34:52 +01:00
Luka Murn
5cb3eb5e09 Refactor preferences -> move them to subcontroller, subroute 2017-02-09 11:07:16 +01:00
okriuchykhin
c2a69982aa Merge pull request #471 from okriuchykhin/ok_SCI_936
Adds datatable to all teams page [SCI-936]
2017-02-07 10:33:33 +01:00
okriuchykhin
e2de3c92e7 Merge pull request #472 from okriuchykhin/ok_SCI_984
Check that user is a member of a team when switching to it [SCI-984]
2017-02-07 09:36:46 +01:00
okriuchykhin
53ff6a2893 Merge pull request #473 from okriuchykhin/ok_SCI_997
Fix smart annotation is missing at editing column with smart annotation [SCI-997]
2017-02-07 09:33:40 +01:00
Oleksii Kriuchykhin
80dbc669d0 Simplify all teams dt definition [SCI-936] 2017-02-06 17:17:48 +01:00
Oleksii Kriuchykhin
449f4479e9 Fix code style issues [SCI-936] 2017-02-06 17:08:20 +01:00
zmagod
c99a540eb3 adds hook to team name in the invitation template [fixes SCI-930] 2017-02-03 16:53:42 +01:00
Oleksii Kriuchykhin
916ed2572a Fix smart annotation is missing at editing column with smart annotation [SCI-997] 2017-02-03 16:42:38 +01:00
Oleksii Kriuchykhin
cc6b518c7f Check that user is a member of a team when switching to it [SCI-984] 2017-02-03 16:10:37 +01:00
Oleksii Kriuchykhin
62535a01bd Move teams datatable js code into separate file [SCI-936] 2017-02-03 10:44:42 +01:00
Oleksii Kriuchykhin
8b105aa030 Add override hooks [SCI-936] 2017-02-02 23:35:47 +01:00
Zmago Devetak
65bbd81497 Merge pull request #469 from ZmagoD/zd_SCI_929
Adds hook in user settings navigation
2017-02-02 15:01:37 +01:00
mlorb
970d99e6e3 Merge pull request #465 from mlorb/ml_sci_937
Redesign of individual team page [SCI-937]
2017-02-02 11:15:55 +01:00
mlorb
5510fa7751 rename data-hooks in team view 2017-02-02 10:36:23 +01:00
Oleksii Kriuchykhin
db90c5d63b Add datatable to all teams page [SCI-936] 2017-02-02 09:53:59 +01:00
zmagod
bb42bd04a5 adds hook in user settings navigation 2017-02-01 17:10:22 +01:00
Mojca Lorber
86351ce17d add data-hooks for billing 2017-02-01 15:01:54 +01:00
Mojca Lorber
d3e0eca44e redesign individual team page 2017-02-01 14:44:47 +01:00
Oleksii Kriuchykhin
031741d122 Disable protocols link if user has no teams [SCI-934] 2017-02-01 14:26:51 +01:00
Oleksii Kriuchykhin
c119b7c014 Make sciNote work for users without any teams [SCI_934] 2017-02-01 14:16:26 +01:00
Zmago Devetak
5c9954bb89 Merge pull request #450 from ZmagoD/zd_SCI_939
Refactor "organizations" to "teams"
2017-02-01 13:12:02 +01:00
okriuchykhin
067b9452a4 Merge pull request #464 from okriuchykhin/ok_SCI_935
Add config option to enable/disable users registration [SCI-935]
2017-02-01 09:36:36 +01:00
Luka Murn
059f9cfb25 Merge pull request #468 from biosistemika/hotfix-1.7.2
Change URLs to sciNote help pages [SCI-978]
2017-01-31 16:15:39 +01:00
Luka Murn
db75231617 Update URLs to sciNote support pages
Closes SCI-978.
2017-01-31 15:48:56 +01:00
zmagod
be5faad97c fixes hound 2017-01-31 13:33:55 +01:00
Oleksii Kriuchykhin
d1e69438de Add config option to enable/disable users registration [SCI-935] 2017-01-30 15:04:02 +01:00
mlorb
bc8c4c3c6c Merge pull request #463 from mlorb/ml_sci_965
Fix step does not save if table is without content [SCI-965]
2017-01-30 11:08:21 +01:00
Mojca Lorber
b291553d01 fix hound 2017-01-27 16:36:03 +01:00
Mojca Lorber
d5021fad2c fix step does not save if table is without content 2017-01-27 16:25:11 +01:00
okriuchykhin
9909f9dcff Merge pull request #456 from okriuchykhin/ok_SCI_951
Fix missing preview images in task and protocol management [SCI-951]
2017-01-27 14:42:41 +01:00
okriuchykhin
c6fe0003f4 Merge pull request #458 from okriuchykhin/ok_SCI_957
Fix protocol table filtering by keywords [SCI-957]
2017-01-27 14:19:53 +01:00
okriuchykhin
53e09bd50a Merge pull request #457 from okriuchykhin/ok_SCI_955
Fix comments re-initialization after edit of the results [SCI-955]
2017-01-27 11:50:52 +01:00
zmagod
e59b2e039a Merge branch 'master' of https://github.com/biosistemika/scinote-web into zd_SCI_939 2017-01-27 11:15:31 +01:00
zmagod
61b260fb8a fixes bug in protocol management 2017-01-27 11:01:44 +01:00
mlorb
77236f161b Merge pull request #461 from mlorb/ml_sci_952
Fix bug with avatar in smart annotations [SCI-952]
2017-01-27 10:08:53 +01:00
Luka Murn
2c3be391a8 Merge pull request #462 from ZmagoD/zd_SCI_962_vol2
fix edit action
2017-01-26 17:25:57 +01:00
Luka Murn
36f25e98f1 Merge pull request #459 from okriuchykhin/ok_SCI_943
Fix RTF toolbar init after eding new step [SCI-943]
2017-01-26 17:25:41 +01:00
zmagod
30912c514e fix edit action 2017-01-26 17:24:24 +01:00
Mojca Lorber
5bed5f0f4a fix bug with avatar in smart annotations 2017-01-26 17:15:00 +01:00
zmagod
cec5f1333d fixes RTE bug for new text results [fixes SCI-962] 2017-01-26 16:54:43 +01:00
Oleksii Kriuchykhin
100cc700c6 Fix RTF toolbar init after eding new step [SCI-943] 2017-01-26 16:37:44 +01:00
Luka Murn
3bf447b0f4 Fix bug where reCaptcha form wasn't working 2017-01-26 16:06:29 +01:00
Oleksii Kriuchykhin
17a53cbd7f Fix protocol table filtering by keywords [SCI-957] 2017-01-26 15:52:46 +01:00
Oleksii Kriuchykhin
ff86184b24 Fix comments re-initialization after edit of the results [SCI-955] 2017-01-26 15:24:37 +01:00
Oleksii Kriuchykhin
0f860496a7 Fix image preview after saving of report [SCI-951] 2017-01-26 14:42:14 +01:00
Luka Murn
3e6d11a087 Merge pull request #455 from mlorb/ml_sci_944
Fix entering new smart anotations [SCI-944]
2017-01-26 14:06:35 +01:00
Mojca Lorber
13d1cc5171 fix entering new smart anotations 2017-01-26 13:50:32 +01:00
Oleksii Kriuchykhin
08aa882155 Fix generation of image previews after protocol loading from repo [SCI-951] 2017-01-26 13:19:59 +01:00
Luka Murn
0baaf12de3 Re-display images & checkboxes in PDF reports
Closes SCI-953.
2017-01-26 10:46:58 +01:00
Luka Murn
8c5a52417c Merge pull request #445 from okriuchykhin/ok_SCI_940
Refactor smart annotation/auto_link/simple_format rendering [SCI-940]
2017-01-25 17:49:38 +01:00
okriuchykhin
648d256dff Merge pull request #448 from okriuchykhin/ok_SCI_945
Fix openning of protocol preview with images [SCI-945]
2017-01-25 17:27:01 +01:00
okriuchykhin
6610c75bfc Merge pull request #452 from okriuchykhin/ok_SCI_949
Fix error when referencing deleted sample in SA [SCI-949]
2017-01-25 17:26:48 +01:00
Oleksii Kriuchykhin
c55f3cb99c Add flag to disable simple_format in custom_auto_link [SCI-940] 2017-01-25 17:18:19 +01:00
Oleksii Kriuchykhin
310d8c1920 Refactor smart annotation/auto_link/simple_format rendering [SCI-940] 2017-01-25 17:18:19 +01:00
mlorb
bedef297c4 Merge pull request #453 from mlorb/ml_sci_950
Fix problem with protocol export [SCI-950]
2017-01-25 17:15:21 +01:00
okriuchykhin
4c0f68ffbd Merge pull request #410 from okriuchykhin/ok_SCI_855
Improved tooltip handling in samples datatable V2 [SCI-855]
2017-01-25 16:19:52 +01:00
Mojca Lorber
99a40961fa fix problem with protocol export 2017-01-25 16:12:48 +01:00
Oleksii Kriuchykhin
5fe9261595 Fix error when referencing deleted sample in SA [SCI-949] 2017-01-25 15:54:12 +01:00
zmagod
a507bb4d1f hound 2017-01-25 15:40:35 +01:00
zmagod
1220466035 fixing hound 2017-01-25 15:00:14 +01:00
zmagod
afd8328e9c rename ortanizations -> teams 2017-01-25 14:22:06 +01:00
Oleksii Kriuchykhin
ddd8bcf7b0 Prevent double initialization of popup [SCI-855] 2017-01-25 13:47:01 +01:00
Oleksii Kriuchykhin
96a9857dec Add handling of popups in the end of the table [SCI-855] 2017-01-25 13:47:01 +01:00
Oleksii Kriuchykhin
fb49ce8be2 Improved tooltip handling in samples datatable [SCI-855] 2017-01-25 13:47:01 +01:00
Mojca Lorber
6905fc8c08 remove letter f 2017-01-25 13:20:11 +01:00
Oleksii Kriuchykhin
90e4b26c69 Fix openning of protocol preview with images [SCI-945] 2017-01-25 13:06:12 +01:00
zmagod
f04a2f663a renamed organizations in config/ 2017-01-25 12:30:11 +01:00
zmagod
8c035a1981 renames organization in assets 2017-01-25 12:12:27 +01:00
okriuchykhin
35b8638598 Merge pull request #446 from okriuchykhin/ok_SCI_902_v2
Add sanitization of group/type to sample edit [SCI-902]
2017-01-25 12:05:30 +01:00
zmagod
72e13beee3 renamed organizations in views 2017-01-25 12:01:23 +01:00
Mojca Lorber
2277af534c fix table titles 2017-01-25 11:01:35 +01:00
zmagod
a6285f0431 renamed utilities 2017-01-25 10:24:50 +01:00
zmagod
9ae799d52c rename organization/org/Organization to Team in datatables 2017-01-25 09:48:49 +01:00
zmagod
9d90b9b42a rename Organization to Team in models 2017-01-24 17:08:48 +01:00
zmagod
c2c5616078 rename Organization to Team in controllers 2017-01-24 17:06:51 +01:00
Oleksii Kriuchykhin
fe6d6842c2 Add sanitization of group/type to sample edit [SCI-902] 2017-01-24 16:58:03 +01:00
zmagod
21c2f82582 rename controllers where org/organization 2017-01-24 16:57:14 +01:00
zmagod
a193850ae6 rename models where org/organization 2017-01-24 16:34:21 +01:00
Oleksii Kriuchykhin
365eef506c Fixes merge conflicts with smart-annotations branch 2017-01-24 15:20:50 +01:00
okriuchykhin
f1483e4cad Merge pull request #444 from okriuchykhin/ok_SCI_902_v2
Add sanitization to sample groups/types [SCI-902]
2017-01-24 14:44:55 +01:00
Oleksii Kriuchykhin
a04f05eeb3 Add sanitization to sample groups/types [SCI-902] 2017-01-24 14:39:54 +01:00
mlorb
02f314ce60 Merge pull request #443 from mlorb/ml_sci_919_v2
Remove table of content and customize link target [SCI-919]
2017-01-24 14:39:47 +01:00
Luka Murn
53699193a2 Merge branch 'smart-annotations'
Conflicts:
	app/assets/javascripts/comments.js.erb
	app/assets/javascripts/protocols/index.js
	app/assets/javascripts/protocols/steps.js.erb
	app/assets/javascripts/samples/sample_datatable.js.erb
	app/controllers/my_module_comments_controller.rb
	app/controllers/project_comments_controller.rb
	app/controllers/result_comments_controller.rb
	app/controllers/step_comments_controller.rb
	app/datatables/sample_datatable.rb
	app/views/my_module_comments/_comment.html.erb
	app/views/project_comments/_comment.html.erb
	app/views/projects/show/_experiment.html.erb
	app/views/reports/elements/_experiment_element.html.erb
	app/views/reports/elements/_result_comments_element.html.erb
	app/views/reports/elements/_result_text_element.html.erb
	app/views/reports/elements/_step_checklist_element.html.erb
	app/views/reports/elements/_step_comments_element.html.erb
	app/views/reports/elements/_step_element.html.erb
	app/views/result_comments/_comment.html.erb
	app/views/results/_result_text.html.erb
	app/views/step_comments/_comment.html.erb
	app/views/steps/_step.html.erb
	db/schema.rb
2017-01-24 14:33:23 +01:00
Mojca Lorber
4dc7998fdd Remove table of content and customize link target 2017-01-24 13:10:01 +01:00
Zmago Devetak
40bf293ec7 Merge pull request #441 from ZmagoD/zd_SCI_924
adds smart annotation in task comments, refactor smart_annotation_par…
2017-01-24 11:18:41 +01:00
mlorb
4253e3de2b Merge pull request #439 from mlorb/ml_sci_919
Remove functionalities from rich text formatting [SCI-919]
2017-01-24 11:03:34 +01:00
mz3944
34f832d123 Merge pull request #437 from mz3944/mz-sci-913
Added smart annotations when adding new sample in samples table [SCI-913]
2017-01-24 11:03:00 +01:00
okriuchykhin
7fa1f3d966 Merge pull request #438 from okriuchykhin/ok_SCI_921
Remove unneeded HTML scrubber in protocol importer [SCI-921]
2017-01-24 11:02:43 +01:00
Matej Zrimšek
b48e48e100 Prevent sample row in samples datatable from toggling when clicking on smart annotation link. [SCI-913] 2017-01-24 10:56:10 +01:00
zmagod
6e7fa21dd3 adds smart annotation in task comments, refactor smart_annotation_parser method, fix the user popover description [fixes SCI-924] 2017-01-24 10:51:12 +01:00
Matej Zrimšek
2e041d9e81 Added smart annotations when adding new sample in samples table. [SCI-913] 2017-01-24 10:23:26 +01:00
Oleksii Kriuchykhin
2434c73a0c Remove unneeded HTML scrabber in protocol importer [SCI-921] 2017-01-24 09:52:38 +01:00
Mojca Lorber
eb40513ada remove functionalities from rich text formatting 2017-01-24 09:44:37 +01:00
Oleksii Kriuchykhin
401b37956b Simplify protocol export start [SCI-742] 2017-01-23 17:43:48 +01:00
Oleksii Kriuchykhin
d555ba7905 Add export to protocol management page and code style improvements [SCI-742] 2017-01-23 17:43:48 +01:00
Oleksii Kriuchykhin
14a6705b55 Implemented protocol export through Zip::OutputStream [SCI-742] 2017-01-23 17:43:48 +01:00
Oleksii Kriuchykhin
1abd7fc574 Added xml schemas and zip gem [SCI-742] 2017-01-23 17:34:02 +01:00
Oleksii Kriuchykhin
69f31a62e7 Initial code commit [SCI-742] 2017-01-23 17:33:10 +01:00
Zmago Devetak
674999f987 Merge pull request #436 from ZmagoD/zd_SCI_922
fixed user without permissions bug [fixes SCI-922]
2017-01-23 17:25:07 +01:00
zmagod
20cde2654b fixed user without permissions bug [fixes SCI-922] 2017-01-23 10:53:42 +01:00
zmagod
9c3bc8dac7 fixes checklist item user popover bug [fixes SCI-907] 2017-01-23 09:47:04 +01:00
mz3944
fd63a1de12 Merge pull request #432 from mlorb/ml-sci-fix-847
Add dynamic length for sample type/group field when adding new sample [SCI-847]
2017-01-20 15:46:34 +01:00
mlorb
2d073c8c04 Merge pull request #430 from mlorb/ml_sci_826
Display smart annotations in reports [SCi-826]
2017-01-20 13:49:40 +01:00
Mojca Lorber
8e02c2e025 add locale - fix 2017-01-20 13:37:07 +01:00
mz3944
18a2e4c423 Merge pull request #433 from mz3944/mz-sci-914
Edit of a sample in sample table does not work
2017-01-20 13:02:05 +01:00
Zmago Devetak
c1e7cc83a7 Merge pull request #434 from ZmagoD/zd_SCI_915
Text is deleted when entering smart annotation in rich text editor
2017-01-20 13:01:29 +01:00
Zmago Devetak
7bd368e002 Merge pull request #431 from ZmagoD/zd_add_code_highlight
Fixes code highlight and smart annotations experiments bug
2017-01-20 12:59:21 +01:00
mlorb
9a3c56de97 Merge pull request #421 from mlorb/ml_sci_540
Protocol steps/results - adding titles for tables [SCI-540]
2017-01-20 11:41:49 +01:00
zmagod
71453398b1 bugfix 2017-01-20 11:33:49 +01:00
zmagod
4f7d62e79d removes unneeded annotations [fixes SCI-915] 2017-01-20 11:33:10 +01:00
Matej Zrimšek
5d65627808 Fixed sample editing in samples table. [SCI-914] 2017-01-20 11:10:17 +01:00
Mojca Lorber
3789769af3 add dynamic length for sample type/group field when adding new sample 2017-01-20 09:53:44 +01:00
zmagod
9550c6dd35 fixes highlight.js 2017-01-19 17:09:25 +01:00
Mojca Lorber
6653f0d4c1 small fixes 2017-01-19 16:42:14 +01:00
Mojca Lorber
6de83ff53b fix hound 2017-01-19 15:58:40 +01:00
Mojca Lorber
4ea154410a add to fields with rich text formatting 2017-01-19 15:27:24 +01:00
Matej Zrimšek
54f8b01341 Removed smart annotation filter button disabling, when no results are found for that filter (so that 'no result found' displays instead). [SCI-894] 2017-01-19 15:26:28 +01:00
Mojca Lorber
44de927cf4 display smart annotations in reports - without rich text fields 2017-01-19 14:22:54 +01:00
Oleksii Kriuchykhin
890c5e3c3d Add “no results found” message in smart annotation [SCI-886] 2017-01-19 13:42:58 +01:00
Zmago Devetak
039a8d7da6 Merge pull request #426 from ZmagoD/zd_add_tinyMCE
Add tiny mce
2017-01-19 12:57:55 +01:00
zmagod
2cbb8ba41a removed unneeded comments 2017-01-19 12:54:48 +01:00
mz3944
da604d2619 Merge pull request #427 from mz3944/mz-sci-908
Some smart annotations refactoring [SCI-908]
2017-01-19 12:15:20 +01:00
zmagod
f2d5066dc7 fix some bugs 2017-01-19 11:37:59 +01:00
Matej Zrimšek
5d86bbb812 Smart annotations improved documentation. [SCI-908] 2017-01-19 10:56:02 +01:00
Matej Zrimšek
fec83e8c45 Smart annotations refactoring. [SCI-908] 2017-01-19 10:55:43 +01:00
zmagod
2ccafdd670 bug fix 2017-01-19 10:12:01 +01:00
zmagod
27d3868f37 fix bugs 2017-01-19 09:40:39 +01:00
zmagod
88d7cb200e removed quill 2017-01-18 23:06:14 +01:00
zmagod
65fa631b1c adding tinyMce first run 2017-01-18 22:40:08 +01:00
okriuchykhin
18d329fb42 Merge pull request #423 from okriuchykhin/ok_SCI_896
Make search work for full names in smart annotations [SCI-896]
2017-01-18 17:58:52 +01:00
Oleksii Kriuchykhin
6555fd02b6 Make search work for full names in smart annotations [SCI-896] 2017-01-18 16:57:51 +01:00
okriuchykhin
7f6ceef9e9 Merge pull request #422 from okriuchykhin/ok_SCI_897
Remove sample type and group from smart annotation [SCI-897]
2017-01-18 16:26:25 +01:00
mz3944
b5e38afb64 Merge pull request #416 from mz3944/mz-sci-884
Smart annotation bug fixes [SCI-884, SCI-889] [WIP]
2017-01-18 16:13:19 +01:00
Matej Zrimšek
dbbb709bf2 Smart annotations minor refactoring. [SCI-884, SCI-889] 2017-01-18 16:04:39 +01:00
Matej Zrimšek
24458fe590 Smart annotations filter switching fixed/hacked. [SCI-884, SCI-889] 2017-01-18 15:29:48 +01:00
Oleksii Kriuchykhin
e45749d3b2 Remove sample type and group from smart annotation [SCI-897] 2017-01-18 14:46:53 +01:00
Mojca Lorber
f656a1093d fix hound 2017-01-18 14:40:24 +01:00
Mojca Lorber
6155a458e7 update search 2017-01-18 14:22:19 +01:00
Mojca Lorber
dde9854bf1 update protocol import/export and clone 2017-01-18 14:22:19 +01:00
Mojca Lorber
3b92ab9f36 add names to tables from protocol steps in reports 2017-01-18 14:22:19 +01:00
Mojca Lorber
b3c423c582 add table name in protocol step 2017-01-18 14:22:18 +01:00
okriuchykhin
8a220c2351 Merge pull request #414 from okriuchykhin/ok_SCI_887
Do not show archived projects, experiments and tasks in smart annotations [SCI-887]
2017-01-18 13:50:22 +01:00
Oleksii Kriuchykhin
55d0e82fcd Change If statement to ternary operator [SCI-887] 2017-01-18 13:43:21 +01:00
Oleksii Kriuchykhin
a490a12fb1 Add truncation of image description in the preview [SCI-873] 2017-01-18 13:28:56 +01:00
Luka Murn
cf72da5635 Merge branch 'improved-files-handling' into 'master'
Conflicts:
	app/assets/javascripts/protocols/steps.js.erb
	app/helpers/assets_helper.rb
	db/schema.rb
2017-01-18 11:29:40 +01:00
okriuchykhin
9dfa30fbb4 Merge pull request #418 from okriuchykhin/ok_SCI_855_v2
Remove previous fix for popups [SCI-855]
2017-01-18 11:00:54 +01:00
Oleksii Kriuchykhin
12eb1df69f Remove previous fix for popups [SCI-855] 2017-01-18 10:59:00 +01:00
Zmago Devetak
1b9f7db385 Merge pull request #405 from ZmagoD/zd_SCI_832
Visualization of User smart annotation after saving the field
2017-01-18 09:36:42 +01:00
okriuchykhin
781a68e0d5 Merge pull request #415 from okriuchykhin/ok_SCI_888
Add missed space in the string [SCI-888]
2017-01-18 09:34:51 +01:00
zmagod
cb0483a6e6 refactor 2017-01-18 08:34:29 +01:00
Oleksii Kriuchykhin
ea8f6a8c6b Fix issue in report editor [SCI-102] 2017-01-17 14:21:59 +01:00
Matej Zrimšek
3085452ec9 Fixed some hound alerts. [SCI-884] 2017-01-17 11:04:16 +01:00
Matej Zrimšek
d3c33c9dca Refactored smart annotation JS. [SCI-884] 2017-01-17 10:05:41 +01:00
Luka Murn
ffc2b56dff Fix String quotes 2017-01-17 08:28:41 +01:00
Luka Murn
2f48409fdd Merge pull request #409 from Ducz0r/lm-sci-813-fix-v2
Fix filter not working correctly with hidden custom columns [SCI-813]
2017-01-17 08:17:52 +01:00
Oleksii Kriuchykhin
0ce71884a5 Add missed space in the string [SCI-888] 2017-01-16 17:09:41 +01:00
Oleksii Kriuchykhin
50edaef4ff Do not show archived projects, experiments and tasks in smart annotations [SCI-887] 2017-01-16 16:55:10 +01:00
Luka Murn
16955dcee6 Fix Hound errors. 2017-01-16 15:58:37 +01:00
Luka Murn
a2935c6620 Add sample info modal popup to sample smart annotations
This MR also loads datatables.js globally (as it's required by
the modal), so I removed it everywhere in code, and it shouldn't
be used anymore (e.g. '//= require datatables').

Closes SCI-892.
2017-01-16 15:52:02 +01:00
Matej Zrimšek
2877126dc6 Fixed selected search filter button style. [SCI-884] 2017-01-16 12:52:03 +01:00
okriuchykhin
02bfd19d1c Merge pull request #385 from okriuchykhin/ok_SCI_102
Fix XSS on activites and throghout the rest of app [SCI-102]
2017-01-16 11:41:38 +01:00
mlorb
88cc87d168 Merge pull request #408 from mlorb/ml-sci-847-v2
Adjust columns width in samples table header after selecting sample group [SCI-847]
2017-01-16 10:52:00 +01:00
Luka Murn
a0e9e5afa8 Merge pull request #402 from mz3944/mz-sci-848-v2
Unable to delete samples [SCI-848]
2017-01-16 10:47:13 +01:00
Luka Murn
0fd9660eb7 Merge pull request #403 from Ducz0r/lm-sci-876-fix
Year difference problems with notifications [SCI-876]
2017-01-14 10:01:38 +01:00
Luka Murn
1acf258c70 Fix minor Zmagohound comment 2017-01-14 10:00:52 +01:00
Mojca Lorber
9f1a49847e fix table header again 2017-01-13 18:54:43 +01:00
Matej Zrimšek
15d7944302 Preventing splitting of the words in the lookup query for # smart annotations. Query on the # is now performed on every character input, before it sometimes just filtered out the old (results count limited) query. Some refactoring of samrt annotations JS. [SCI-884, SCI-889] 2017-01-13 18:51:05 +01:00
Luka Murn
ba567284ed Fix filter not working correctly with hidden custom columns
Closes SCI-813.
2017-01-13 17:03:19 +01:00
Mojca Lorber
5f7e0b2227 adjust columns width in samples table header after selecting sample group 2017-01-13 15:59:47 +01:00
okriuchykhin
1ae5e6f8a7 Merge pull request #406 from okriuchykhin/ok_SCI_855
Fix compatibility of fixed samples table header and modal-tooltip [SCI-855]
2017-01-13 15:56:37 +01:00
Oleksii Kriuchykhin
a190ef36ff Extend comment to make more clear [SCI-855] 2017-01-13 12:43:43 +01:00
zmagod
1b2fa78e42 adds user preview to user smart annotation [fixes SCI-832] 2017-01-13 11:34:10 +01:00
Oleksii Kriuchykhin
097209bd9d Fix compatibility of fixed samples table header and modal-tooltip [SCI-855] 2017-01-13 11:34:05 +01:00
Mojca Lorber
bc6fbc5f91 fix hound 2017-01-13 11:18:44 +01:00
Mojca Lorber
4250088447 fix broken scrolling functionality in samples table 2017-01-13 11:07:33 +01:00
Oleksii Kriuchykhin
f567d0307e Fix includes [SCI-102] 2017-01-12 17:02:01 +01:00
Oleksii Kriuchykhin
75031e17b9 Remove double sanitization from views [SCI-102] 2017-01-12 16:54:15 +01:00
Oleksii Kriuchykhin
69b65c27f8 Remove input sanitization in the models [SCI-102] 2017-01-12 16:20:37 +01:00
Luka Murn
bc03a26d4b Also fix this new year issue on comments display 2017-01-12 15:06:12 +01:00
Luka Murn
8b01f912a0 Fix new year problems with activities
Closes SCI-876.
2017-01-12 14:47:15 +01:00
Matej Zrimšek
93a8e0bdae Fixes sample deletion when coming from experiment page and having modules attached. [SCI-848] 2017-01-12 14:08:29 +01:00
Oleksii Kriuchykhin
0350f2f792 Add html escaping to name filelds in the views [SCI-102] 2017-01-12 11:03:14 +01:00
zmagod
1840fdb7e5 cleanup js 2017-01-12 09:52:29 +01:00
Oleksii Kriuchykhin
d05c16b0ba Added auto_link wrapper with custom sanitization [SCI-102] 2017-01-11 17:02:17 +01:00
mz3944
aba12b9b2c Merge pull request #401 from mz3944/mz-sci-878
Protocol repository - user cannot download files
2017-01-11 16:25:45 +01:00
Oleksii Kriuchykhin
0546716a0b Improve user input sanitization, fix bugs [SCI-102] 2017-01-11 15:50:11 +01:00
okriuchykhin
404952336d Merge pull request #400 from okriuchykhin/ok_SCI_846
Fixes sorting of custom columns in samples datatable [SCI-846]
2017-01-11 15:34:02 +01:00
mlorb
fe1ef97523 Merge pull request #398 from mlorb/ml_sci_843
Adjust samples tables height when in edit mode selecting sample type/group [SCI-843]
2017-01-11 15:33:52 +01:00
Mojca Lorber
3a3f20a215 fix bug with different approach 2017-01-11 15:25:10 +01:00
zmagod
065e1a7120 fix hound 2017-01-11 15:06:00 +01:00
zmagod
3a1ec0eb5e refactor [fixes SCI-834] [fixes SCI-837] [fixes SCI-823] [fixes SCI-835] [fixes SCI-836] [fixes SCI-824] 2017-01-11 14:56:47 +01:00
Matej Zrimšek
30a9c283fb Added back bullets to images in protocol preview in protocol repository. 2017-01-11 14:15:07 +01:00
Matej Zrimšek
852dc2eb7e Added file downloading to protocol preview in protocol repository. [SCI-878] 2017-01-11 14:14:12 +01:00
Oleksii Kriuchykhin
094d0f0f71 Fixes sorting of custom columns in samples datatable [SCI-846] 2017-01-11 13:21:38 +01:00
okriuchykhin
8d4b2d7373 Merge pull request #399 from okriuchykhin/ok_SCI_811_v2
Fix changed sample type and sample group in sample edit [SCI-811]
2017-01-11 11:37:38 +01:00
mlorb
90e644ddd9 Merge branch 'master' into ml_sci_843 2017-01-11 11:35:41 +01:00
mlorb
f0842389b2 Merge pull request #396 from mlorb/ml_sci_851
Change color of clickable names when row is selected in datatables [SCI-851]
2017-01-11 11:21:31 +01:00
mlorb
b898c792c4 Merge pull request #395 from mlorb/ml_sci_847
Adjust columns width in table header after selecting sample type/group [SCI-847]
2017-01-11 10:43:12 +01:00
zmagod
a4aa933151 refactor smart annotation parser helper 2017-01-11 10:34:14 +01:00
zmagod
a903772de8 style dropdown 2017-01-10 17:05:32 +01:00
Oleksii Kriuchykhin
a3d9e25feb Fix changed sample type and sample group in sample edit [SCI-811] 2017-01-10 16:51:51 +01:00
Mojca Lorber
577e526fec adjust samples tables height when in edit mode selecting sample type or group 2017-01-10 16:31:20 +01:00
zmagod
fc76a4ae6d Merge branch 'smart-annotations' of https://github.com/biosistemika/scinote-web into zd_SCI_834 2017-01-10 14:22:04 +01:00
zmagod
89e8946a47 expand smart annotation 2017-01-10 14:14:21 +01:00
zmagod
e0e998a0d8 add smart annotation parser helper 2017-01-10 14:14:21 +01:00
zmagod
6efcf49927 working version of dropdown filter 2017-01-10 14:14:21 +01:00
zmagod
53d20df449 added xregexp 2017-01-10 14:14:21 +01:00
zmagod
94262b56ef prepare data for atwho 2017-01-10 14:14:21 +01:00
Luka Murn
0cf5afa499 Merge pull request #376 from Ducz0r/lm-sci-813-fix
Fix search on hidden columns in samples table [SCI-813]
2017-01-10 11:27:56 +01:00
Luka Murn
05be1e862f Update filter after toggling visibility (if neccesary) 2017-01-10 11:26:12 +01:00
okriuchykhin
f8237e025a Merge pull request #394 from okriuchykhin/ok_SCI_853
Fix non removable error messages in samples [SCI-853]
2017-01-10 11:00:01 +01:00
Luka Murn
5873eea994 We serve to please the Hound 2017-01-10 10:42:52 +01:00
Oleksii Kriuchykhin
4c9c9037ed Enable image preview after editing protocol and disable preview modal animation [SCI-868] 2017-01-09 17:19:46 +01:00
Mojca Lorber
510731bd4e change color of clickable nameswhen row is selected in datatables 2017-01-09 15:51:21 +01:00
Mojca Lorber
a0a7f35d44 adjust columns width in table header after selecting sample type/group 2017-01-09 15:00:07 +01:00
Oleksii Kriuchykhin
773b00933a Improve multiple messages handling in samples [SCI-853] 2017-01-09 13:55:50 +01:00
Oleksii Kriuchykhin
0fd7688427 Fix hiding of error messages in the samples datatable [SCI-853] 2017-01-09 13:34:23 +01:00
okriuchykhin
3f930ccfce Merge pull request #392 from okriuchykhin/ok_SCI_858
Fixes wrong samples info modals being shown in samples datatable [SCI-858]
2017-01-09 12:49:38 +01:00
mz3944
54ef2be94b Merge pull request #383 from mz3944/mz-sci-845
Fixed samples table all rows un/checking. [SCI-845]
2017-01-09 11:58:44 +01:00
mz3944
ef431da2db Merge pull request #389 from mz3944/mz-sci-848
Unable to delete samples [SCI-848]
2017-01-09 11:57:48 +01:00
okriuchykhin
3c47d17019 Merge pull request #386 from okriuchykhin/ok_SCI_815
Improve error message when importing CSV files with incorrect character encoding [SCI-815]
2017-01-09 11:54:28 +01:00
zmagod
226d5d8247 added blank string to wopi-lock header param 2017-01-09 11:51:18 +01:00
mlorb
006db01b11 Merge pull request #390 from mlorb/ml_sci_850
Fix samples info popup error [SCI-850]
2017-01-09 11:38:50 +01:00
mlorb
f14ad0f762 Merge pull request #387 from mlorb/ml_sci_732
Add protocol preview to search results [SCI-732]
2017-01-09 11:28:04 +01:00
Oleksii Kriuchykhin
bc8db28746 Fixes wrong samples info modals being shown in samples datatable [SCI-858] 2017-01-09 09:38:42 +01:00
Luka Murn
0ee5b98977 Refactor code a bit, add dismiss button to header 2017-01-07 09:59:52 +01:00
Matej Zrimšek
72df48500d Fixed samples table all rows un/checking. [SCI-845] 2017-01-06 18:19:20 +01:00
Mojca Lorber
6f7c08fa63 fix samples info popup error 2017-01-06 17:31:17 +01:00
Oleksii Kriuchykhin
89710d8782 Enable image preview for newly uploaded images [SCI-694] 2017-01-06 16:41:24 +01:00
Oleksii Kriuchykhin
aa2b573278 Enable image preview while editing steps and code style improvements [SCI-694] 2017-01-06 15:58:23 +01:00
mz3944
1b56e9d07c Merge pull request #384 from mz3944/mz-sci-849
Fixes experiment button not being clicable in project overview page. …
2017-01-06 14:26:37 +01:00
Matej Zrimšek
ec7a1cb4c0 Replaced remaining related hard-coded names with constants and generalized delete samples name fetching. Minor refactoring. [SCI-848] 2017-01-06 14:23:20 +01:00
Matej Zrimšek
5d104981fd Fixed sample deletion on experiments level. Minor refactoring. [SCI-848] 2017-01-06 14:23:20 +01:00
Luka Murn
7835753d3c Add atwho-users URL to <body> 2017-01-06 12:48:37 +01:00
Luka Murn
3cdd375a2d Merge pull request #388 from biosistemika/hotfix-1.6.1
Hotfix 1.6.1
2017-01-06 11:23:16 +01:00
Mojca Lorber
aad2eadeae syntax fix 2017-01-06 10:46:36 +01:00
Mojca Lorber
4e7e261225 fix protocol preview 2017-01-06 10:10:33 +01:00
Mojca Lorber
356edba1b3 add protocol preview to search results 2017-01-05 18:08:59 +01:00
Oleksii Kriuchykhin
cba064dfcc Improve error message whan importing CSV files with incorrect character encoding [SCI-815] 2017-01-05 17:00:21 +01:00
Luka Murn
488613afcc Add index to users' full name attribute 2017-01-05 16:26:49 +01:00
Oleksii Kriuchykhin
9987993ce0 Avoid sanitizing of data attributes [SCI-102] 2017-01-05 16:05:48 +01:00
Oleksii Kriuchykhin
1009347026 Add list of whitelisted attributes [SCI-102] 2017-01-05 15:33:41 +01:00
Luka Murn
ef688feb4e Hotfix 1.6.1
Set confirmed_at to created_at when using no
email confirmations and users sign up by themselves.
2017-01-05 15:27:18 +01:00
Matej Zrimšek
4b0f47675a Fixes experiment button not being clicable in project overview page. [SCI-849] 2017-01-05 14:42:52 +01:00
Luka Murn
b614ce714b Restyle atwho dropdown 2017-01-05 14:06:48 +01:00
Oleksii Kriuchykhin
0ecb6904d4 Add user input sanitizing in the models [SCI-102] 2017-01-05 13:31:35 +01:00
Oleksii Kriuchykhin
835e982292 SAnitize AJAX calls in controllers and datatables [SCI-102] 2017-01-05 13:12:22 +01:00
Oleksii Kriuchykhin
cd3924afd3 Sanitize .html_safe marked strings which contain tags [SCI-102] 2017-01-05 13:04:19 +01:00
Oleksii Kriuchykhin
9c4191a1e0 Initial code commit [SCI-102] 2017-01-05 13:04:19 +01:00
Luka Murn
a78bb79618 Temp commit 2017-01-05 12:07:17 +01:00
Luka Murn
eb64162633 Remove Gem dependency, add atwho as regular vendor/js 2017-01-05 12:06:59 +01:00
Luka Murn
e12907c9b9 Remove original atwho css, apply our own 2017-01-05 10:52:28 +01:00
Luka Murn
09ef3b3ad5 Merge pull request #378 from Ducz0r/lm-sci-802-fix
Add tooltips to samples column dropdown [SCI-802]
2017-01-04 11:30:04 +01:00
Luka Murn
2c5b27ce81 Change "Update" to "Save"
Closes SCI-802.
2017-01-04 11:29:34 +01:00
mlorb
59751ec41e Merge pull request #373 from mlorb/ml_sci_709
Add Protocol Preview to Protocol repository [SCI-709]
2017-01-04 11:28:55 +01:00
Luka Murn
3bee9d2e12 Save an (yet unworking) version of user smart annotations
Used so other devs can start working on smart annotations.
2017-01-04 10:54:02 +01:00
Luka Murn
23e60e0d01 Add Gems for smart annotations (atwho) 2017-01-04 10:51:55 +01:00
Luka Murn
cedc6c5074 Merge pull request #382 from Ducz0r/lm-sci-166-fix
Re-add tags index controller action to render tags [SCI-166]
2017-01-04 10:48:09 +01:00
Luka Murn
6402acc102 Merge pull request #377 from Ducz0r/lm-sci-820-fix
Fix 2 bugs with comments editing [SCI-820]
2017-01-04 10:47:29 +01:00
zmagod
87ffa7f03b fixes X-WOPI-ServerVersion bug 2017-01-04 10:02:08 +01:00
Luka Murn
37cd6417c8 Merge pull request #374 from Ducz0r/lm-sci-808-814-fix
Fix some bugs on sample groups & types page [SCI-808, SCI-814]
2017-01-04 09:50:26 +01:00
Mojca Lorber
fe37ac3b6d fix hound 2 2017-01-03 17:46:30 +01:00
Mojca Lorber
0011474ea3 fix hound 2017-01-03 17:43:55 +01:00
Mojca Lorber
a0704cd873 remove duplicated includes of css and js 2017-01-03 17:33:01 +01:00
zmagod
a434649f42 Merge branch 'master' of https://github.com/biosistemika/scinote-web into office_integration 2017-01-03 16:35:25 +01:00
Mojca Lorber
c476faca30 fix hound 2017-01-03 11:04:09 +01:00
Mojca Lorber
e555535dfb add edit button to protocol preview modal 2017-01-03 10:04:14 +01:00
Luka Murn
af9e272b2a Re-add tags index controller action to render tags
Closes SCI-166.
2017-01-03 09:39:41 +01:00
Zmago Devetak
5d0e80a5e1 Merge pull request #369 from ZmagoD/zd_SCI_812
fixes bug with samples sorting [fixes SCI-812]
2017-01-03 08:56:59 +01:00
Oleksii Kriuchykhin
c77c83752e Remove unused css class link-look [SCI-819] 2016-12-30 15:50:43 +01:00
Oleksii Kriuchykhin
0d01a4b2bd Remove unneeded function from utils.js [SCI-819] 2016-12-30 15:50:43 +01:00
Oleksii Kriuchykhin
4065be9e4e Fix marking of selected option [SCI-819] 2016-12-30 15:50:43 +01:00
Oleksii Kriuchykhin
e22ff6f8bb Fix an issue with sample editing and type/group dropdowns [SCI-819] 2016-12-30 15:50:43 +01:00
okriuchykhin
2474eac37d Merge pull request #367 from okriuchykhin/ok_SCI_818
Fix sample info popup [SCI-818]
2016-12-30 15:43:28 +01:00
okriuchykhin
e826791429 Merge pull request #365 from okriuchykhin/ok_SCI_807
Fix buttons disappear when deleting columns in samples [SCI-807]
2016-12-30 15:43:13 +01:00
okriuchykhin
68ac3486c7 Merge pull request #381 from okriuchykhin/ok_SCI_275
Add task name to project activity [SCI-275]
2016-12-30 15:32:08 +01:00
okriuchykhin
73478d7b5e Merge pull request #372 from okriuchykhin/ok_SCI_816
Fix flash message display in samples table [SCI-816]
2016-12-30 15:30:14 +01:00
okriuchykhin
cce57d066c Merge pull request #370 from okriuchykhin/ok_SCI_817
Fix issue with long samples column names in import modal [SCI-817]
2016-12-30 15:29:32 +01:00
okriuchykhin
e8955b0304 Merge pull request #375 from okriuchykhin/ok_SCI_361
Add sorting to Project's experiments overview [SCI-361]
2016-12-30 15:28:53 +01:00
Oleksii Kriuchykhin
f076226b3f Add task name to project activity [SCI-275] 2016-12-29 16:31:48 +01:00
Oleksii Kriuchykhin
d798f1b120 Fix XSS vulnerability in protocol keywords [SCI-632] 2016-12-29 15:15:29 +01:00
Oleksii Kriuchykhin
e156dbc987 Implement flash message hiding through module pattern [SCI-816] 2016-12-28 14:52:03 +01:00
Luka Murn
2304742d87 Add tooltips to samples column dropdown
Closes SCI-802.
2016-12-27 08:45:23 +01:00
Luka Murn
b931b20f02 Fix 2 bugs with comments editing
Closes SCI-820.
2016-12-23 20:41:23 +01:00
Luka Murn
fbc2be890c Fix search on hidden columns in samples table
Closes SCI-813.
2016-12-23 19:56:54 +01:00
Oleksii Kriuchykhin
4d3e002c81 Add sorting to Project's experiments overview [SCI-361] 2016-12-23 15:40:01 +01:00
Luka Murn
4b50c73474 Merge pull request #363 from Ducz0r/lm-sci-546-fix
Restyle step table display in reports [SCI-546]
2016-12-23 12:57:54 +01:00
Luka Murn
87d8fece46 Fix bug on edit/cancel sample group page
Closes SCI-814.
2016-12-23 12:50:49 +01:00
mlorb
876ce37a96 Merge pull request #366 from mlorb/ml-sci-284
Samples - freeze header row and edit button... [SCI-284]
2016-12-23 12:29:41 +01:00
Luka Murn
3922be2b17 Change String in sample types & groups
Closes SCI-808.
2016-12-23 11:48:57 +01:00
Mojca Lorber
40e3240a99 add content to preview modal 2016-12-22 11:43:11 +01:00
Luka Murn
5beaa26224 Update utils.js
Closes SCI-811.
2016-12-22 10:03:00 +01:00
Oleksii Kriuchykhin
ee5e0ad455 Fix flash message display in samples table [SCI-816] 2016-12-21 17:26:33 +01:00
zmagod
e554fdf805 code refactor 2016-12-21 16:52:15 +01:00
Luka Murn
af6bf2aee1 Fix jQuery selector, make it work for new samples 2016-12-21 16:23:09 +01:00
zmagod
01849a46db removed unneeded lines 2016-12-21 15:40:07 +01:00
zmagod
a5a8bbf27a fixed assigned column bug 2016-12-21 15:35:05 +01:00
Oleksii Kriuchykhin
53ea09c3de Fix issue with long samples column names in import modal [SCI-817] 2016-12-21 14:34:53 +01:00
zmagod
e2723a288c fixes bug with samples sorting [fixes SCI-812] 2016-12-21 14:32:28 +01:00
Luka Murn
e52277bdad Fix sample types & groups when editing sample in samples table
Closes SCI-811.
2016-12-21 13:15:55 +01:00
Oleksii Kriuchykhin
034976a709 Fix sample info popup [SCI-818] 2016-12-20 17:21:17 +01:00
Oleksii Kriuchykhin
00ea3a027c Fix generation of preview url for new steps and results [SCI-694] 2016-12-20 16:10:53 +01:00
Oleksii Kriuchykhin
cbef971d85 Fix timeouts when fetching images from S3 [SCI-694] 2016-12-20 15:36:07 +01:00
Mojca Lorber
ba0214d1ff staying on same page after saving a sample; fix button disappearance when adding new column 2016-12-20 15:19:31 +01:00
Mojca Lorber
165ec6144c adjust columns width in table header when editing or adding new sample; and fix horizontal scrolling 2016-12-20 13:41:19 +01:00
Oleksii Kriuchykhin
42f71f4da8 Fix buttons disappear when deleting columns in samples datatable [SCI-807] 2016-12-20 09:49:21 +01:00
Oleksii Kriuchykhin
d2b76d8385 Improved image preview modal [SCI-694] 2016-12-19 17:36:18 +01:00
Mojca Lorber
d1e2354f4e add scrolling functionality and remove bug with adding new column 2016-12-19 16:59:09 +01:00
zmagod
6f7f6a8b7f removes dropdown sorting [fixes SCI-811] 2016-12-19 16:41:14 +01:00
Luka Murn
a48eaf662e Restyle step table display in reports so
Closes SCI-546.
2016-12-19 15:09:49 +01:00
zmagod
efe41817f2 removes sample group/type link in new sample form [fixes SCI-809] 2016-12-19 10:49:21 +01:00
Oleksii Kriuchykhin
b537feb8a0 Added large preview [SCI-694] 2016-12-16 17:07:08 +01:00
Oleksii Kriuchykhin
8738b3e09d Added image preview to Results [SCI-694] 2016-12-16 15:55:46 +01:00
Oleksii Kriuchykhin
0541253ffa Added modal for images preview [SCI-694] 2016-12-16 15:53:16 +01:00
Zmago Devetak
90a115fff3 Merge pull request #342 from ZmagoD/zd_SCI_758
Generate png preview images for uploaded TIFF images
2016-12-16 15:39:07 +01:00
Zmago Devetak
c8631077df Merge pull request #361 from biosistemika/improved-sample-table
Improved sample table
2016-12-16 15:37:54 +01:00
Zmago Devetak
c9d38a5454 Merge pull request #359 from ZmagoD/zd_SCI_804
disables sorting and columns dropdown when editing or adding new samp…
2016-12-16 12:56:11 +01:00
Zmago Devetak
601594fdb9 Merge pull request #355 from ZmagoD/zd_fix_mozilla_compatibility_issue
fixes compatibility issue on mozilla firefox
2016-12-16 11:57:18 +01:00
Zmago Devetak
b35744d18e Merge pull request #360 from ZmagoD/zd_update_gemfile
updated gemfile
2016-12-16 11:53:05 +01:00
zmagod
897e34a23b reinitialize highlight.js after ajax call 2016-12-16 11:44:42 +01:00
zmagod
b87246c8c2 cleanup spinner after edit step 2016-12-16 11:10:03 +01:00
Zmago Devetak
ad9b25ba44 Merge pull request #356 from ZmagoD/zd_SCI_803
fixes bug with long column names in edit mode [fixes SCI-803]
2016-12-16 11:02:42 +01:00
Zmago Devetak
3d500800cd Merge pull request #358 from ZmagoD/zd_SCI_805_801
removes error message from new type/group form [fixes SCI-805]
2016-12-16 10:54:23 +01:00
zmagod
25671c744a disables sorting and columns dropdown when editing or adding new sampe [fixes SCI-804] 2016-12-16 09:50:45 +01:00
zmagod
fffa0d91da removes error message from new type/group form [fixes SCI-805] 2016-12-15 16:17:34 +01:00
zmagod
7c88f3e0aa fixed empty name error 2016-12-15 15:50:07 +01:00
zmagod
6755ebcbf8 fixes bug with long column names in edit mode [fixes SCI-803] 2016-12-15 15:26:51 +01:00
Zmago Devetak
daee14bed5 Merge pull request #343 from ZmagoD/zd_SCI_780
fixed step description links [fixes SCI-780]
2016-12-15 13:12:25 +01:00
zmagod
dc6e9dcbd8 fixes compatibility issue on mozilla firefox 2016-12-15 11:57:17 +01:00
Mojca Lorber
69d164da68 add new column on first position 2016-12-15 11:20:40 +01:00
zmagod
9083f84396 Merge branch 'improved-sample-table' of https://github.com/biosistemika/scinote-web into zd_SCI_789 2016-12-15 11:03:19 +01:00
zmagod
3e31f114d4 app/assets/javascripts/samples/sample_datatable.js 2016-12-15 10:51:17 +01:00
zmagod
b164886270 fixed error mesage scroll 2016-12-15 10:44:23 +01:00
zmagod
b003d192c3 fixed edit mode 2016-12-15 09:54:38 +01:00
zmagod
ba58ac2a77 Merge branch 'improved-sample-table' of https://github.com/biosistemika/scinote-web into zd_SCI_781_796 2016-12-15 09:26:12 +01:00
zmagod
54fee339f8 cleanup unneeded code 2016-12-15 09:23:38 +01:00
zmagod
4d6a85ed7c fixed sample groups colorpicker [fixes SCI-781] 2016-12-15 09:23:38 +01:00
zmagod
b07f9fae59 fixes new sample group/type link in sample row [fixes SCI-796] 2016-12-15 09:23:38 +01:00