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4262 commits 31 branches 181 tags 166 MiB
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555 commits

Author SHA1 Message Date
Luka Murn
d8ca42aa0c Refactor repository_table_state and its class methods 2018-04-20 12:31:22 +02:00
Luka Murn
5e2622ecfc Change default repository state to Ruby representation 
Also remove some dead code from repositories datatables
 2018-04-20 12:31:22 +02:00
zmagod
c23eacfe13 fixes for_admin action/ test visible_by functlion 2018-04-19 12:41:00 +02:00
zmagod
9d282d1800 adds new reports index page [fixes SCI-2124] 2018-04-18 16:47:52 +02:00
Luka Murn
9bf8b5d864 Merge branch 'ok_SCI_1860' of https://github.com/okriuchykhin/scinote-web into okriuchykhin-ok_SCI_1860 
Conflicts:
	Makefile
	app/assets/javascripts/projects/index.js.erb
	app/assets/stylesheets/themes/scinote.scss
	config/locales/en.yml
 2018-04-12 13:16:46 +02:00
zmagod
024032faff refactor update protocol keywords action [fixes SCI-2257] 2018-04-06 15:41:50 +02:00
zmagod
6e255a4657 fixes failing specs 2018-04-04 14:44:32 +02:00
zmagod
e630d3113f add ID column to repository [fixes SCI-2206] 2018-04-04 11:55:11 +02:00
Oleksii Kriuchykhin
e42fc3117b Implement search in file repository cells and improve performance [SCI-2111] 2018-03-26 13:19:09 +02:00
Zmago Devetak
75d7ace8c7
Merge pull request #1017 from ZmagoD/zd_SCI_2068 
Write server-side endpoints for custom repositories [SCI-2068]
 2018-03-20 14:30:47 +01:00
okriuchykhin
d906baff61
Merge pull request #1039 from okriuchykhin/ok_SCI_1697 
Improve connections between repository models [SCI-1697]
 2018-03-19 16:42:55 +01:00
Oleksii Kriuchykhin
a105e61d48 Remove tutorial [SCI-1860] 2018-03-18 13:18:05 +01:00
Oleksii Kriuchykhin
9371d77762 Improve connections between repository models [SCI-1697] 2018-03-16 13:12:33 +01:00
zmagod
fad4001273 fix edit row action 2018-03-16 12:27:19 +01:00
Oleksii Kriuchykhin
27a605d974 Fix failing test [SCI-2148][SCI-2149] 2018-03-16 11:05:38 +01:00
zmagod
1cdba5e0d3 Merge branch 'samples_to_repositories_table_migration' of https://github.com/biosistemika/scinote-web into zd_SCI_2068 2018-03-16 11:05:16 +01:00
zmagod
d69754af04 implement search on list items dropdown, update, create actions [fixes SCI-2070] 2018-03-15 15:43:16 +01:00
zmagod
b67a54e2d1 Merge branch 'samples_to_repositories_table_migration' of https://github.com/biosistemika/scinote-web into zd_SCI_2024_fix_custom_repositores_import 2018-03-13 15:25:57 +01:00
okriuchykhin
503617b42c
Merge branch 'samples_to_repositories_table_migration' into zd_SCI_2025 2018-03-13 14:44:20 +01:00
zmagod
dd2f7dd417 Merge branch 'master' of https://github.com/biosistemika/scinote-web into samples_to_repositories_table_migration 2018-03-13 13:24:36 +01:00
Oleksii Kriuchykhin
269f7d74fa Add explicit ordering to samples_tables [SCI-2148][SCI-2149] 2018-03-13 13:16:34 +01:00
okriuchykhin
262c21d145
Merge pull request #1036 from okriuchykhin/ok_SCI_2078 
Implement importable selector for repository columns [SCI-2078]
 2018-03-13 13:14:53 +01:00
Oleksii Kriuchykhin
be1ead22e0 Implement importable selector for repository columns [SCI-2078] 2018-03-13 11:36:05 +01:00
Oleksii Kriuchykhin
21c07371c9 Fix repository export to support file columns [SCI-2079] 2018-03-13 10:40:27 +01:00
mlorb
34f5c2c7ac fix validation in asset model and change formatted method in repository_asset_value model 2018-03-12 10:50:45 +01:00
mlorb
64e26e1c60 add file custom column type to db 2018-03-09 17:04:54 +01:00
Oleksii Kriuchykhin
e4d974aa58 Add uniqueness validation for SamplesTable [SCI-2148][SCI-2149] 2018-03-09 15:34:06 +01:00
zmagod
4f951f6679 adds unit specs for datatable service [fixes SCI-2068] 2018-03-09 14:22:00 +01:00
Oleksii Kriuchykhin
1765d83cd1 Refactor search to support repository list items [SCI-2108] 2018-03-09 11:05:43 +01:00
zmagod
26883af386 fix assigned ordering 2018-03-08 17:36:10 +01:00
zmagod
fb66131e29 setup endpoint for repository_rows paging/search 2018-03-06 16:32:39 +01:00
mz3944
bb21f6543c
Merge pull request #1004 from mz3944/mz-SCI-2011 
Wrapping up the permissions [SCI-2011]
 2018-03-06 07:10:40 +01:00
zmagod
fca01bd54f refactor repository export [fixes SCI-2025] 2018-03-05 15:54:04 +01:00
Zmago Devetak
50ccec5007
Merge pull request #1009 from ZmagoD/zd_SCI_2066 
add info modal for repository items [fixes SCI-2066]
 2018-03-05 12:49:29 +01:00
zmagod
0996745781 refactor repository import, adds RepositoryListType as an option and makes the import class more extensible [fixes SCI-2024] 2018-03-02 13:39:22 +01:00
mlorb
08439e7f58 sign up with linkedIn account 2018-02-28 18:12:21 +01:00
Matej Zrimšek
b8b9707c06 Fixed protocol and archive permission calls, fixed result permissions; module group managing is now also allowed on newly created groups; other permission call fixes and some refactoring. 2018-02-19 14:51:14 +01:00
Matej Zrimšek
321ddc2916 Grouped existing project permissions and used 'canaid' gem. 2018-02-14 13:09:45 +01:00
zmagod
36595d33f4 fix name scope 2018-02-12 09:09:56 +01:00
zmagod
d12f8403e4 add reference to repository column 2018-02-12 09:05:41 +01:00
zmagod
ae99c92516 follow @okriuchykhin 's suggestions 2018-02-09 16:28:21 +01:00
zmagod
557aeca049 refactor relations 2018-02-09 14:11:56 +01:00
zmagod
7c13c5a1f4 fixes typo, follows @okriuchykhin 's suggestions 2018-02-09 11:38:52 +01:00
zmagod
6b7ff11bcf setup models for repository list column [fixes SCI-2015] 2018-02-07 15:28:28 +01:00
Oleksii Kriuchykhin
16e1d072b9 Improve files handling in protocol clonning [SCI-2003] 2018-02-01 15:44:08 +01:00
mlorb
775b8b3201 fix bug with ajax error caused to the other user when deleting column in custom repository 2018-01-29 16:01:33 +01:00
zmagod
f8a3fca2db Merge branch 'master' of https://github.com/biosistemika/scinote-web into decoupling 2018-01-23 11:06:33 +01:00
Oleksii Kriuchykhin
819febb05b Remove skip_on_import from repository_cell [SCI-1939] 2018-01-17 12:54:32 +01:00
Oleksii Kriuchykhin
a64012237e Fix repository records import [SCI-1939] 2018-01-15 18:01:35 +01:00
Oleksii Kriuchykhin
2ddb0ea009 Improve XLSX parsing with Roo [SCI-1915] 2018-01-11 17:52:57 +01:00
zmagod
862b73cae7 Merge branch 'decoupling-settings-page' of https://github.com/biosistemika/scinote-web into zd_SCI_1866 2018-01-05 09:13:43 +01:00
okriuchykhin
e49ffb61d4
Merge pull request #914 from okriuchykhin/ok_SCI_1873 
Fix repositories [SCI-1873]
 2018-01-04 13:33:30 +01:00
Oleksii Kriuchykhin
66869fe4cf Fix canvas update [SCI-1871] 2017-12-20 11:44:11 +01:00
Oleksii Kriuchykhin
512ee07bde Fix repositories [SCI-1873] 2017-12-19 17:53:45 +01:00
Luka Murn
cf291bf887 Merge branch 'gilson-iot-rails4' 
Conflicts:
	Gemfile.lock
 2017-12-19 10:56:39 +01:00
zmagod
219ef3baf6 setup new pagination for activities 2017-12-14 14:02:40 +01:00
Oleksii Kriuchykhin
6256acdfea Rename notifications settings accessor [SCI-1864] 2017-12-07 13:59:33 +01:00
Zmago Devetak
027f4a5921
Merge pull request #890 from ZmagoD/zd_SCI_1651 
export and import RTE images
 2017-11-24 16:28:28 +01:00
Zmago Devetak
3cd7e6fdde
fix open method 2017-11-24 15:19:58 +01:00
mlorb
9e7b75a880
Merge pull request #892 from mlorb/ml-sci-1215_v2 
Make background gray for paperclip images [SCI-1215]
 2017-11-23 17:32:09 +01:00
Mojca Lorber
0ffe476a54 make background gray for paperclip images 2017-11-23 14:35:42 +01:00
Luka Murn
00fe267a2a Minor codestyle fixes 2017-11-23 11:33:39 +01:00
Mojca Lorber
fe5828fa97 add copying of TinyMce assets when cloning the protocol 2017-11-22 16:47:21 +01:00
zmagod
91fec89cab adds tiny_mce_assets to protocol export 2017-11-21 16:30:48 +01:00
Luka Murn
d715eb06ef Add team & project role-related helper functions to User model 
This will be required later once we start using Canaid.
 2017-11-16 15:50:30 +01:00
Oleksii Kriuchykhin
f202687291 Allow import of the sample with missing non mandatory fields [SCI-1819] 2017-11-15 16:40:14 +01:00
Oleksii Kriuchykhin
84f4aba213 Pull latest master into gilson-iot-rails4 2017-11-15 15:15:26 +01:00
Mojca Lorber
f75a2710d5 fix preview for images with transparent background 2017-11-13 18:03:14 +01:00
zmagod
e0b6683a44 create view directory per @Ducz0r 's request 2017-11-09 10:06:53 +01:00
zmagod
e0323a0a46 fixes failing tests 2017-10-27 09:35:39 +02:00
zmagod
3d22a5404d add scenic gem, teams datatables sql view 2017-10-26 16:59:00 +02:00
Luka Murn
82f982e983 Merge branch 'rails-5.1' into decoupling-settings-page 
Conflicts:
	Gemfile
	Gemfile.lock
 2017-10-23 10:59:10 +02:00
Luka Murn
6c2c5aff17 Additional fixes required by latest merge from master 2017-10-23 09:51:13 +02:00
Luka Murn
8254153bb9 Merge branch 'master' into rails-5.1 
Conflicts:
	Gemfile
	Gemfile.lock
	app/models/connection.rb
	app/models/experiment.rb
	app/models/my_module.rb
 2017-10-23 08:57:57 +02:00
okriuchykhin
8e90e041b9 Merge pull request #825 from okriuchykhin/ok_SCI_1665 
Optimize memory usage in samples/repositories import [SCI-1665]
 2017-10-17 17:26:00 +02:00
Oleksii Kriuchykhin
c8d2ae70fa Move duplicated code to service [SCI-1665] 2017-10-17 14:46:16 +02:00
zmagod
6fe48a07ae fix hound, add custom hook for webpacker:compile 2017-10-16 17:02:35 +02:00
zmagod
c5978f2d86 adds cucumber test for profile page [fixes SCI-1572] 2017-10-16 16:21:52 +02:00
Oleksii Kriuchykhin
d266034406 Use case insensitive sample types and groups in import [SCI-1689] 2017-10-13 17:15:51 +02:00
Oleksii Kriuchykhin
56f52ebfa7 Optimize memory usage in samples/repositories import [SCI-1665] 2017-10-12 14:43:25 +02:00
Oleksii Kriuchykhin
9a8e33c6d7 Small fixes [SCI-1642] 2017-10-11 17:24:31 +02:00
Oleksii Kriuchykhin
6820511ea0 Further canvas optimizations [SCI-1642] 2017-10-06 12:43:27 +02:00
Oleksii Kriuchykhin
b26b963e54 Optimize update canvas SQL and remove module group name [SCI-1642] 2017-10-05 16:19:25 +02:00
zmagod
c20f0c2d8a fixes user_controller specs, adds user model specs for settings 2017-10-05 15:53:05 +02:00
zmagod
a020e23286 follow suggestions of @Ducz0r 2017-10-05 13:56:56 +02:00
zmagod
cb4bacc372 refactor preferences page [fixes SCI-1564] 2017-09-28 16:53:51 +02:00
zmagod
c8c8afdd1d update react-bootstrap 2017-09-28 15:00:54 +02:00
zmagod
26b526d61b adds getter and setters for user settings 2017-09-27 14:38:52 +02:00
zmagod
e2aa0d7515 fixes user profile 2017-09-26 17:29:11 +02:00
Luka Murn
e078ae4f77 Merge branch 'rails-5.1' into decoupling-settings-page 2017-09-21 08:36:09 +02:00
Luka Murn
beae1b05d8 Merge branch 'master' into rails-5.1 
Conflicts:
	Gemfile
	Gemfile.lock
 2017-09-21 08:27:38 +02:00
Mojca Lorber
0e14420193 fix bugs with importing samples 2017-09-06 14:41:14 +02:00
zmagod
9c01ab414c refactor leave team 2017-09-01 17:10:43 +02:00
Oleksii Kriuchykhin
fc0e2d2172 Add validation for uid uniqness [GIOT-29] 2017-09-01 17:00:13 +02:00
Oleksii Kriuchykhin
c3fceb90df Backport API to Rails-4 [SCI-1579] 2017-08-30 13:30:41 +02:00
zmagod
478bd491ff added pagination and sorting to team tables 2017-08-28 17:05:09 +02:00
zmagod
db16da7bd6 adds custom query to fetch teams data 2017-08-25 16:07:37 +02:00
zmagod
c5e32c4ea0 Merge branch 'rails-5.1' of https://github.com/biosistemika/scinote-web into merge-rails-5.1-branch 2017-08-21 09:52:14 +02:00
Luka Murn
ec7b7ffe08 You are my sunshine, my only sunshine, 
You make me happy when skies are grey
You never know, Hound, how much I love you
Please don't take my Hound away
 2017-08-10 14:42:58 +02:00
Luka Murn
9227ea5854 Finish the user settings jsonb, also fix references throughout app 
Closes SCI-1475.
 2017-08-10 14:29:01 +02:00