48 commits

Author	SHA1	Message	Date
Martin Artnik	1b26a4f65a	Added access token to protocols.io requests [SCI-5968]	2021-08-26 15:26:35 +02:00
Oleksii Kriuchykhin	3509543e7b	Merge branch 'master' into ok_SCI_3881	2019-09-16 11:56:49 +02:00
Oleksii Kriuchykhin	c068901b00	Upgrade Rails to 6.0 [SCI-3745]	2019-09-12 17:24:08 +02:00
Oleksii Kriuchykhin	6f7ef25514	Add local sorting for ProtocolsIO [SCI-3827]	2019-09-05 14:49:16 +02:00
Urban Rotnik	795c355f01	Merge pull request #1915 from urbanrotnik/ur-sci-3531-tests-for-step-components ... Add tests for StepComponents [SCI-3531]	2019-07-15 13:25:36 +02:00
Jure Grabnar	015dae1a05	Fix old tests	2019-07-15 08:27:34 +02:00
Jure Grabnar	a372d4056d	Add last_published protocols.io endpoint	2019-07-14 19:24:53 +02:00
Urban Rotnik	5cf100a787	Show 'published_on' instead of 'created_on' on external_protocols list	2019-07-12 16:56:07 +02:00
Urban Rotnik	b9bec32316	Add tests for StepComponents	2019-07-10 12:48:08 +02:00
Urban Rotnik	cc3cd43270	Log to console when error occur on ProtocolsImport actions	2019-07-09 15:32:43 +02:00
Urban Rotnik	10639deb97	Strip tags for table's content	2019-07-09 13:41:52 +02:00
Urban Rotnik	be77746aef	Fix description styling of components	2019-07-09 13:41:51 +02:00
Urban Rotnik	8411e92fa2	Add linebreak for 'There was a table' message	2019-07-09 10:54:48 +02:00
Jure Grabnar	05f2210002	SCI-3650, SCI-3655 Fix empty file name, empty description when… (#1892) ... SCI-3650, SCI-3655 Fix empty file name, empty description when parsing tables	2019-07-09 10:24:03 +02:00
Jure Grabnar	dc7fee51fa	Add Show more protocols functionality to external protocols ... Closes SCI-3646	2019-07-04 15:35:18 +02:00
Jure Grabnar	721bb9ab77	SCI-3649 All reagent data from step are not imported (#1881) ... SCI-3649 All reagent data from step are not imported	2019-07-03 16:54:25 +02:00
Jure Grabnar	6944045bfb	Check for empty description before passing to Nokogiri ... Closes SCI-3655	2019-07-03 16:36:26 +02:00
Jure Grabnar	8866d98512	Fix empty file name on protocols.io ... Closes SCI-3650	2019-07-03 16:11:51 +02:00
Jure Grabnar	4715e8ec4b	Fix building of zero steps protocls ... Close SCI-3648	2019-07-03 09:34:15 +02:00
Miha Mencin	611c417b43	code review changes	2019-07-03 09:21:41 +02:00
Miha Mencin	ab038ffdf7	SCI-3649 adding catalog number, fixing up the design a bit	2019-07-02 19:47:05 +02:00
Jure Grabnar	ebbb36cc6d	Remove border from the import button	2019-06-28 11:32:47 +02:00
Jure Grabnar	8146a6a42c	Assign name = position if protocolsIO step has no name	2019-06-28 11:29:03 +02:00
Jure Grabnar	c10428cd2a	Fix sorting buttons not applying params	2019-06-28 08:55:27 +02:00
Jure Grabnar	9be4fc2470	Fix tests	2019-06-28 02:19:06 +02:00
Jure Grabnar	0a77cedaf8	Fix sorting of external protocols and start showing results	2019-06-27 22:48:56 +02:00
Urban Rotnik	9cb4454537	New implementation for attachments creation	2019-06-27 17:02:06 +02:00
Jure Grabnar	82fb8ebd2e	Implement protocols.io error handling (#1869) ... Implement protocols.io error handling	2019-06-27 16:35:55 +02:00
Jure Grabnar	06b8d1fda7	Update ApiClient tests ... Closes SCI-3434	2019-06-27 14:54:19 +02:00
Jure Grabnar	8a7a2eb097	Add StandardError checking for ProtocolNormalizer	2019-06-27 10:12:00 +02:00
Jure Grabnar	86bc69e510	Simplify V3 errors structure	2019-06-27 09:42:21 +02:00
Mojca Lorber	9fd83d54a0	Put network error handeling into api and refactor errors	2019-06-26 14:04:03 +02:00
Urban Rotnik	bf6041e13d	Update sanitization of html descriptions	2019-06-19 11:05:22 +02:00
Urban Rotnik	7e69375016	Drop header column and row when extract tables	2019-06-19 10:47:38 +02:00
Urban Rotnik	2a579f2240	Add Warnings, Before start and Guidelinese to protocol description	2019-06-19 09:02:42 +02:00
Mojca Lorber	ebcaa4b014	Implement protocols.io error handling for api client and normalizer	2019-06-18 14:01:57 +02:00
Urban Rotnik	7fad5fc594	Add search service and normalizer for list	2019-06-17 12:24:15 +02:00
Jure Grabnar	362b0cd45d	Hound fixes	2019-06-17 12:24:11 +02:00
Jure Grabnar	640f6c1211	Fix tests after BuildProtocolFromClientService refactor ... Closes SCI-3544	2019-06-17 12:24:11 +02:00
Jure Grabnar	1e8627c450	Refactor ImportProtocol service to BuildProtocolService ... Closes SCI-3544	2019-06-17 12:24:10 +02:00
Urban Rotnik	2bb4f558b7	View rendering simplified, small improvements	2019-06-17 12:24:09 +02:00
Urban Rotnik	807104035c	Add StepBuilder, TableBuilder, AssetBuilder for PIO, normalized updated	2019-06-17 12:24:09 +02:00
Urban Rotnik	6a4deb0201	Add ProtocolIntermediateObject	2019-06-17 12:24:09 +02:00
Urban Rotnik	aadf2eecb4	Basic data normalizer for ProtocolIO	2019-06-17 12:24:08 +02:00
Urban Rotnik	ec49388283	Add protocol base normalizer class	2019-06-17 12:24:08 +02:00
Jure Grabnar	c1cee07a63	Extract API client constants to constants.rb	2019-06-17 12:24:08 +02:00
Jure Grabnar	a15b1f6dfa	Add logging for ApiClient and fix hound formatting	2019-06-17 12:24:08 +02:00
Jure Grabnar	5685709f48	Implement API client for protocols.io ... Closes SCI-3357	2019-06-17 12:24:07 +02:00