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1403 commits

Author SHA1 Message Date
Mojca Lorber
f06358b2ae Implement missing tests for global activities (task and protocol activities) 2019-03-27 11:24:44 +01:00
Oleksii Kriuchykhin
dab75d5aec Fix duplicated projects in new report modal [SCI-3173] 2019-03-26 17:24:30 +01:00
Oleksii Kriuchykhin
2ff43a3320 Change filtering logic when no filters are selected [SCI-3223] 2019-03-26 16:04:03 +01:00
Alex Kriuchykhin
935e3a65cf
Merge pull request #1586 from okriuchykhin/ok_SCI_3199 
Fix multiple bugs in global activities [SCI-3197][SCI-3199][SCI-3213][SCI-3225]
 2019-03-26 16:02:44 +01:00
Miha Mencin
9a30d7be9d SCI-3232 renaming the attribute name so it doesnt get 'constantized' 2019-03-26 11:39:54 +01:00
Oleksii Kriuchykhin
e3a3ec4491 Fix multiple bugs in global activities [SCI-3197][SCI-3199][SCI-3213][3225] 2019-03-25 17:38:13 +01:00
Miha Mencin
4a87216a3d
Merge branch 'master' into features/global-activities 2019-03-25 14:35:24 +01:00
aignatov-bio
9fff93ab0e
Merge pull request #1576 from biosistemika/image-editor-prototype 
Feature/Image annotation
 2019-03-22 16:31:00 +01:00
Anton Ignatov
65521533b4 change js.erb to js 2019-03-22 13:35:11 +01:00
Anton Ignatov
4ec0a3c871 Update TinyMCE image loader for new fields 2019-03-22 10:52:26 +01:00
Anton Ignatov
bc58f0aecd Merge branch 'features/note-section' into ai-sci-3131-improve-image-file-upload 2019-03-21 11:48:51 +01:00
Mojca Lorber
c55e314ed5 Refactor upon the review requests 2019-03-20 21:34:47 +01:00
Anton Ignatov
55c93922ea markup fixes 2019-03-20 14:46:54 +01:00
Anton Ignatov
07c2819163 refactoring tinymce image uploading 2019-03-20 14:46:54 +01:00
Oleksii Kriuchykhin
0c2b7959b6 Fix smart annotations in RTE [SCI-3111] 2019-03-20 11:41:36 +01:00
Mojca Lorber
4f9814b884 Merge branch 'features/global-activities' of github.com:biosistemika/scinote-web into ml-sci-3021 2019-03-20 11:03:00 +01:00
Jure Grabnar
cf5505d95f Add missing inventory name in notification 
Closes SCI-3149
 2019-03-20 10:52:58 +01:00
Anton Ignatov
29b67be127 Fix team selection in global activities and add link from navbar 2019-03-20 10:33:22 +01:00
Mojca Lorber
cd7a87348f Protocol activities refactoring, without tests 2019-03-19 16:12:07 +01:00
Mojca Lorber
c476816359 Task activities refactoring, without tests 2019-03-19 15:33:57 +01:00
Mojca Lorber
7757096693 Results activities refactoring 2019-03-19 15:33:57 +01:00
Mojca Lorber
1418abc8d7 Reports activities refactoring 2019-03-19 15:33:57 +01:00
Mojca Lorber
d1e38e5bc9 Project activities refactoring 2019-03-19 15:33:57 +01:00
Mojca Lorber
70eebca5ee experiment activities refactoring 2019-03-19 15:33:57 +01:00
aignatov-bio
6eae12efab
Updating permission check for image editing [SCI - 3153, 3159] (#1568) 
*Add permission check for assets editing

* Add check for image format
 2019-03-19 13:52:57 +01:00
Anton Ignatov
f606210652 Rubocop fix 2019-03-19 13:52:03 +01:00
Anton Ignatov
87280f083a [SCI-3166] Finalize global activities front end 2019-03-19 13:50:55 +01:00
aignatov-bio
a0a3c4b97f
Fix file format bug (#1569) 2019-03-19 11:06:36 +01:00
Oleksii Kriuchykhin
0c71493fdb Add viewing permissions for global activities [SCI-2997] 2019-03-18 15:38:19 +01:00
Urban Rotnik
5dccdbab17 fixup! Fix failing tests 2019-03-15 11:12:10 +01:00
Urban Rotnik
2ea2700837 fixup! Fix failing tests 2019-03-15 10:30:51 +01:00
Oleksii Kriuchykhin
a822227383 Add rich text editor to task and protocol description [SCI-3062][SCI-3071] 2019-03-14 16:27:33 +01:00
Oleksii Kriuchykhin
645930b8d7 Merge branch 'master' into features/note-section 2019-03-14 16:25:51 +01:00
Urban Rotnik
b6a8556601 Add activities for exporting Projects, Inventory items 2019-03-12 09:15:06 +01:00
Urban Rotnik
e7b57aa4f7 Add creating activities for Team actions 2019-03-12 09:15:06 +01:00
Urban Rotnik
3f18166320 Add Task and TaskTags activities 2019-03-12 09:15:06 +01:00
Urban Rotnik
7a05e817ef Add new Protocol steps activities 2019-03-12 09:15:06 +01:00
Urban Rotnik
b33e95e18a New Protocols actions logging 2019-03-12 09:14:53 +01:00
Urban Rotnik
cfe2888bea Repository columns actions loggin 2019-03-12 09:11:00 +01:00
Urban Rotnik
32422c00eb RepositoryRows actions loggin 2019-03-12 09:11:00 +01:00
Urban Rotnik
2a7bbac733 Repository actions logging 2019-03-12 09:11:00 +01:00
Urban Rotnik
976831e7d3 Edit and Archive experiment activity logging 2019-03-12 09:11:00 +01:00
Oleksii Kriuchykhin
feb75f62e1 Add workaround for image caching in fabric js [SCI-2855] 2019-03-11 15:10:32 +01:00
Oleksii Kriuchykhin
80e525fd97 Improve image editor behaviour [SCI-2855] 2019-03-11 15:09:49 +01:00
Oleksii Kriuchykhin
89e968c410 Add tui.image-editor [SCI-2815] 2019-03-11 15:08:15 +01:00
Urban Rotnik
9ed3313f0f Create project activity refactored 2019-03-11 08:36:15 +01:00
Jure Grabnar
eceda4909f Move edit_file permission for wopi file in a special function 
Used for overwritting it in addons.

Closes SCI-2949
 2019-03-08 12:22:35 +01:00
aignatov-bio
ec2dbb897f
Adding side pane filter and top pane tags [SCI - 3008, 3009, 3010, 3011, 3012, 3018, 3019, 3020] (#1521) 
* Adding side pane filtering and top pane
 2019-03-06 10:34:04 +01:00
aignatov-bio
125d2a3b9b
New inline tags editing in task [SCI 3093] (#1529) 
* Adding inline tags selection
 2019-03-06 09:18:45 +01:00
aignatov-bio
b1df8c9aa7
Adding inline editing to experiment title, project title and task title [SCI-3059] (#1524) 
* Adding inline editing to experiment title, project title and task title
 2019-03-06 09:17:34 +01:00
Miha Mencin
9807c80286 move the create action to the tope section of controller 2019-03-05 10:49:36 +01:00
Miha Mencin
67fe486874 put the scheduling logic into session create action 2019-03-05 10:43:39 +01:00
Miha Mencin
fa7bba9de7 scheduling creation of demo project at the sign in time 
remove wrong schema, fix comment, add migration
 2019-03-04 18:26:15 +01:00
Miha Mencin
844303ae7c SCI-3119 schedule the creaton of template 2019-03-01 17:47:04 +01:00
Oleksii Kriuchykhin
61147b480c Add main global activities bussiness logic [SCI-3014] 2019-02-26 11:01:15 +01:00
Urban Rotnik
3ad6cee766 Fix tests, remove nullable field 2019-02-25 16:50:38 +01:00
Miha Mencin
76c3db0b11 added layout, added css, added select2 lib, WIP 2019-02-25 16:50:38 +01:00
Miha Mencin
bcd0b433b6
Merge pull request #1514 from biosistemika/features/system-notifications 
Features/system notifications
 2019-02-21 16:38:58 +01:00
aignatov-bio
5f78d83f9c
Changing status from unread to read system notification is not correct one [SCI-3077 and SCI-3075] (#1513) 
* fix dropdown apperance

* Remove search and fix duplicate bug

* Fix specs for new method
 2019-02-21 16:15:13 +01:00
aignatov-bio
fcdb4e7a92
Merge pull request #1500 from biosistemika/features/system-notifications 
Features/system notifications
 2019-02-19 13:51:18 +01:00
aignatov-bio
8e905b67b2
System notification navbar menu drop down [SCI 2955] (#1498) 
* Add dropdown menu and icon for system notifications
* Finish system notification dropdown menu and add tests
 2019-02-19 11:08:59 +01:00
aignatov-bio
c598541e09
System notification modal window [SCI-2957 and SCI-2958] (#1484) 
* Added new system notification modal

* Adding loading system notification on sign in
 2019-02-15 13:07:29 +01:00
mlorb
71e4cc4dbd
Merge branch 'master' into ml-sci-2940 2019-02-13 14:35:03 +01:00
aignatov-bio
5c85595ab4
System Notifications - View All Page [SCI-2956 and SCI-3001] (#1482) 
* System notification view and notification partial (SCI 2956 and SCI 3001)
 2019-02-13 13:06:14 +01:00
Oleksii Kriuchykhin
3376fd012c Improve error loggin in protocol import [SCI-3023] 2019-02-07 14:00:24 +01:00
Urban Rotnik
6f7fcb0831 Refactor method clone_experiment_as_template into service object 
[SCI-2925]
 2019-01-31 07:13:40 +01:00
mz3944
2ae56eb13f
Merge pull request #1448 from mz3944/mz-SCI-2929 
Can not switch team [SCI-2929]
 2019-01-31 04:43:39 +01:00
Urban Rotnik
4cf12d12d1 Refactor 'move_experiment' method into service object 
Jira Ticket: SCI-2926
 2019-01-28 11:45:36 +01:00
Urban Rotnik
16e9a56874 Add recaptcha to invitation modal 
SCI-2935
 2019-01-25 11:27:01 +01:00
Urban Rotnik
247bae8a9f Refactor export_all_counter increasing/reseting logic 
- Remove daily task
- Add method to user Model
 2019-01-25 11:16:31 +01:00
Mojca Lorber
fa1dff6352 refactor Demo project generation 2019-01-24 13:40:53 +01:00
mz3944
f6c8af105d
Merge pull request #1434 from mz3944/mz-SCI-2903 
Fix (unite) Date and Time display formats [SCI-2903]
 2019-01-21 09:50:34 +01:00
Miha Mencin
0766ee96a7
Merge pull request #1447 from okriuchykhin/ok_SCI_2875_v2 
Fix task tags update on canvas cards [SCI-2875]
 2019-01-16 12:44:50 +01:00
Oleksii Kriuchykhin
3a4b992f4e Code style fixies []SCI-2875] 2019-01-14 16:31:23 +01:00
Matej Zrimšek
a5c1cf4450 Switch user's team if he's no longer a member of the currently selected one 2019-01-12 23:39:31 +01:00
Oleksii Kriuchykhin
89240659a7 Fix task tags update on canvas cards [SCI-2875] 2019-01-11 17:20:39 +01:00
Alex Kriuchykhin
b530cea771
Merge pull request #1438 from okriuchykhin/ok_SCI_2776 
Add counters to task inventories dropdown [SCI-2776]
 2019-01-11 16:27:22 +01:00
Oleksii Kriuchykhin
132f46b136 Improve error handling in task inventories dropdown [SCI-2776] 2019-01-10 21:11:20 +01:00
Matej Zrimšek
8070b7f8b5 Fix Date and Time display formats on JS side 2019-01-08 08:07:24 +01:00
Oleksii Kriuchykhin
534866467b Add counters to task inventories dropdown [SCI-2776] 2019-01-03 14:11:00 +01:00
Oleksii Kriuchykhin
2769add4d9 Disable edit button for unsupported WOPI formats [SCI-2904] 2018-12-31 18:10:12 +01:00
Alex Kriuchykhin
8a348b8504
Merge pull request #1422 from okriuchykhin/ok_SCI_2910 
Improve rendering speed of inventory table [SCI-2910]
 2018-12-16 19:45:29 +01:00
Oleksii Kriuchykhin
d5c07fd22a Improve rendering speed of inventory table [SCI-2910] 2018-12-13 16:17:22 +01:00
Oleksii Kriuchykhin
311189a2e9 Replace reports materialized view with normal queries and re-enable fragment caching [SCI-2894] 2018-12-13 11:18:09 +01:00
Alex Kriuchykhin
4e416fe81b
Merge pull request #1404 from okriuchykhin/ok_SCI_2822 
Return task inputs/outputs as references [SCI-2822]
 2018-12-12 11:36:39 +01:00
mlorb
3f79cc5f93
Merge pull request #1418 from mlorb/ml-sci-2905 
Fix due date can not be set [SCI-2905]
 2018-12-12 11:27:57 +01:00
mlorb
426fadc10a Fix due date can not be set 2018-12-11 10:31:13 +01:00
mlorb
4040b31143 Fix behavior when user has no teams 2018-12-10 15:42:05 +01:00
Alex Kriuchykhin
37db41e18e
Merge pull request #1405 from okriuchykhin/ok_SCI_2881 
Refresh sidebar when project is archived/restored [SCI-2881]
 2018-12-10 14:11:34 +01:00
Oleksii Kriuchykhin
2c96f08b98 Refresh sidebar when project is archived/restored [SCI-2881] 2018-11-29 14:20:20 +01:00
Oleksii Kriuchykhin
5b566b48ae Improve error messages and fix task users/items endpoints [SCI-2886] 2018-11-28 14:14:45 +01:00
Oleksii Kriuchykhin
b3a377f949 Return task inputs/outputs as references [SCI-2822] 2018-11-28 11:33:00 +01:00
Alex Kriuchykhin
20e2cbf0ca
Merge pull request #1391 from okriuchykhin/ok_SCI_2880 
Fix smart annotations rendering issues [SCI-2880]
 2018-11-28 09:47:20 +01:00
mlorb
398c2f0576
Merge pull request #1392 from mlorb/ml-sci-2676 
Hide sign-in with third party applications (e.g. LinkedIn) in Oauth… [SCI-2676]
 2018-11-27 11:06:45 +01:00
mlorb
0b6b3b3609 code simplify 2018-11-27 10:58:51 +01:00
Oleksii Kriuchykhin
d67abfda2c Additional fixies for smart annotations [SCI-2880] 2018-11-26 15:17:18 +01:00
Jure Grabnar
7812f70c2f
Merge pull request #1393 from jbargu/jg_2790_protocolsio_fix 
Protocols - import from protocols.io doesn't work
 2018-11-26 14:56:25 +01:00
mlorb
18d9ab5888 fixes upon @Ducz0r request 2018-11-26 14:23:26 +01:00
Jure Grabnar
6ec2c99a28 Hound styling 2018-11-26 13:52:01 +01:00
Jure Grabnar
0086e4dcf3 Catch some of templates error when import protocols.io 2018-11-26 13:43:05 +01:00
Jure Grabnar
1c7a051551 Catch all errors on PIO import and show message 2018-11-23 20:47:48 +01:00
mlorb
f61187dd18 Hide sign-in with third party applications (e.g. LinkedIn) in Oauth flows 2018-11-23 15:44:04 +01:00
Oleksii Kriuchykhin
5deaf25fd9 Prevent user being added to project/task multiple times [SCI-2869] 2018-11-20 14:29:33 +01:00
Alex Kriuchykhin
a6bc02a2cb
Merge pull request #1369 from okriuchykhin/ok_SCI_2830 
Refactor result and step comments [SCI-2830]
 2018-11-20 00:13:15 +01:00
mlorb
3b96a60938
Merge pull request #1374 from mlorb/ml-sci-2842 
Update the Export all confirmation modal and export interaction [SCI-2842]
 2018-11-19 11:36:08 +01:00
Alex Kriuchykhin
d524a1d508
Merge pull request #1364 from okriuchykhin/ok_SCI_2778 
Add time format selection to settings [SCI-2778]
 2018-11-19 10:17:09 +01:00
mlorb
4b540958bd change close/cancel button and refactor export_project_modal endpoint 2018-11-16 13:37:32 +01:00
mlorb
6453ab6fb1 update the Export all confirmation modal and export interaction 2018-11-15 15:53:58 +01:00
Luka Murn
e9c0b34662 Merge branch 'core-api' into 'master' 
Conflicts:
	Gemfile
	app/services/api.rb
	config/initializers/api.rb
	config/initializers/extends.rb
	config/routes.rb
	db/schema.rb
	spec/controllers/api/api_controller_spec.rb
 2018-11-14 16:59:04 +01:00
Oleksii Kriuchykhin
3fd687161f Remove unused variables from activities controller [SCI-2778] 2018-11-14 13:17:38 +01:00
Oleksii Kriuchykhin
537de596a7 Merge latest master [SCI-2778] 2018-11-14 13:05:57 +01:00
Luka Murn
c0940b143a Fix root page bug introduced with merge features/core-api -> master 2018-11-13 21:24:20 +01:00
Oleksii Kriuchykhin
fb309a12b9 Refactor result and step comments initialization [SCI-2830] 2018-11-13 16:57:42 +01:00
Luka Murn
84df2c81f9 Merge branch 'features/export-all' 
Conflicts:
	app/controllers/experiments_controller.rb
	app/controllers/my_modules_controller.rb
	db/schema.rb
 2018-11-13 09:14:02 +01:00
Oleksii Kriuchykhin
e89d60785f Fix dates on activities and experiments [SCI-2778] 2018-11-12 10:26:48 +01:00
Oleksii Kriuchykhin
8d0dbc7076 Add time format selection to settings [SCI-2778] 2018-11-09 16:19:40 +01:00
mlorb
75875e5421 fix user_project manage permission 2018-11-09 11:36:44 +01:00
mlorb
a56d22a329
change count to size 2018-11-08 09:43:32 +01:00
Oleksii Kriuchykhin
23ee4760ae Fix failing tests [SCI-2773] 2018-11-07 16:39:00 +01:00
Oleksii Kriuchykhin
30885e060d Merge latest core-api branch [SCI-2773] 2018-11-07 15:53:21 +01:00
Oleksii Kriuchykhin
60e78fa868 Improve code style for error handling [SCI-2773] 2018-11-07 15:43:44 +01:00
mlorb
4d156080ac fix empty projects page bug and projects tree bug 2018-11-07 13:45:46 +01:00
mlorb
ad5f4c2ebb
Merge pull request #1356 from mlorb/ml-sci-remove-protocol-show-endpoint 
Remove show protocol api endpoint
 2018-10-30 14:04:17 +01:00
Alex Kriuchykhin
2f466383a5
Merge pull request #1333 from okriuchykhin/ok_SCI_2742 
RESTful API for Object Querying (READ) - unit tests [SCI-2742]
 2018-10-29 16:26:58 +01:00
Alex Kriuchykhin
126fa03305
Merge pull request #1349 from okriuchykhin/ok_SCI_2818 
Fix project index endpoint permission bug [SCI-2818]
 2018-10-29 14:59:22 +01:00
Alex Kriuchykhin
1083ce61fb
Merge pull request #1352 from okriuchykhin/ok_SCI_2814 
Rename user_id to sub in JWT [SCI-2814]
 2018-10-29 14:54:00 +01:00
mlorb
0f8c80172e remove show protocol api endpoint 2018-10-29 11:21:48 +01:00
mz3944
d733f4e357
Merge pull request #1346 from mz3944/mz-SCI-2787 
In project list table table is not updated when archiving/restoring project [SCI-2787]
 2018-10-28 14:36:17 +01:00
Oleksii Kriuchykhin
04ff5870af Rename user_id to sub in JWT [SCI-2814] 2018-10-28 14:34:51 +01:00
Jure Grabnar
0977f5251d
Merge pull request #1351 from jbargu/jg_add_zero_limit_to_export 
Fix zero limit config on export all
 2018-10-28 13:38:21 +01:00
Jure Grabnar
cab0b78afa Fix zero limit config on export all 2018-10-28 09:43:34 +01:00
Oleksii Kriuchykhin
9ad2718f32 Fix project index endpoint permission bug [SCI-2818] 2018-10-26 16:46:01 +02:00
Oleksii Kriuchykhin
93e7c3f390 Fix inventory column creation permission check [SCI-2782] 2018-10-26 14:38:47 +02:00
Jure Grabnar
7d2f2c3b5f
Merge pull request #1337 from jbargu/jg_bug_sci_2805 
Add can_export_project? permission to allow archived projects to be exported [SCI-2805]
 2018-10-26 11:23:57 +02:00
Matej Zrimšek
18e52e2c6f Fix fetching all user projects [SCI-2787] 2018-10-24 00:29:30 +02:00
Oleksii Kriuchykhin
b53f2c8347 Improve error messages in API [SCI-2773] 2018-10-23 17:52:48 +02:00
Jure Grabnar
bd5a2a43fd Add can_export_project? permission 
Closes [SCI-2805].
 2018-10-19 08:41:39 +02:00
Alex Kriuchykhin
18b1cad8a4
Merge pull request #1334 from okriuchykhin/ok_SCI_2772 
Implement inventory column data type name mappings [SCI-2772]
 2018-10-17 10:37:23 +02:00
Oleksii Kriuchykhin
e4e66d3e5d Merge branch 'core-api' into ok_SCI_2742 2018-10-16 17:38:30 +02:00
Oleksii Kriuchykhin
02f536cd08 Merge latest features/export-all [SCI-2733] 2018-10-16 17:20:19 +02:00
Oleksii Kriuchykhin
ed46115b3f Implement inventory column data type name mappings [SCI-2772] 2018-10-16 15:35:02 +02:00
Oleksii Kriuchykhin
f6b039d54e Merge latest core-api branch [SCI-2765] 2018-10-16 12:07:47 +02:00
Jure Grabnar
ed16e8d479 Fix reviewers errors 2018-10-16 11:00:38 +02:00
Jure Grabnar
26df1e5a98 Add export project modal 
Closes [SCI-2645]
 2018-10-16 11:00:38 +02:00
Oleksii Kriuchykhin
0db9ef44e2 Add experiment, task, result READ endpoints tests [SCI-2742] 2018-10-15 16:27:22 +02:00
Luka Murn
1093ea11f4 Merge branch 'lm-api-fixes' of https://github.com/Ducz0r/scinote-web into Ducz0r-lm-api-fixes 
Conflicts:
	app/serializers/api/v1/activity_serializer.rb
	app/serializers/api/v1/inventory_column_serializer.rb
	app/serializers/api/v1/project_serializer.rb
 2018-10-15 15:20:26 +02:00
Oleksii Kriuchykhin
f221d71bbc Fix datatables state restore [SCI-2733] 2018-10-12 15:15:43 +02:00
Luka Murn
a217b11bba
Merge pull request #1298 from Zanz2/zz_projects_api_task_2539 
Created read endpoint for projects and related models [SCI-2539]
 2018-10-11 09:03:18 +02:00
Luka Murn
dd4f7b5d02 Fix project users, activities, comments, reports endpoints 2018-10-10 17:35:09 +02:00
Oleksii Kriuchykhin
af02f29fb5 Implement user state saving for projects overview [SCI-2733] 2018-10-10 16:15:31 +02:00