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2384 commits 31 branches 181 tags 166 MiB
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1921 commits

Author SHA1 Message Date
zmagod
01b27e9e6d added getting started hoot to layout/application.html 2016-10-28 10:36:15 +02:00
Mojca Lorber
91ec201fd0 make image clickable 2016-10-27 16:18:31 +02:00
Oleksii Kriuchykhin
d28edfb488 Added statistics block in users profile [SCI-566] 2016-10-27 13:44:27 +02:00
Mojca Lorber
888aa31aed fix hound 2016-10-27 11:18:11 +02:00
Mojca Lorber
5719d4c61f show edit avatar on mouse hover, add background and center image 2016-10-27 11:09:30 +02:00
Mojca Lorber
8309df0aaf fix hound 2016-10-26 13:51:05 +02:00
Mojca Lorber
878952f072 change edit avatar in profile 2016-10-26 13:41:17 +02:00
Luka Murn
b4685b0a40 Remove console.log() 2016-10-25 18:13:29 +02:00
Luka Murn
cd360d7279 Fix the save report alert() bug 
Closes SCI-616
 2016-10-25 18:12:29 +02:00
Luka Murn
eec6b1403d Merge pull request #247 from Ducz0r/lm-hotfix-blank-current-org 
Add check in application controller to always set current org if nil
 2016-10-25 11:53:05 +02:00
Zmago Devetak
266d1415d0 Merge pull request #246 from ZmagoD/zd_SCI_599 
fixes error when removing user from team [SCI-599]
 2016-10-25 11:52:44 +02:00
Luka Murn
7885fd0f39 Add check in application controller to always set current org if nil 2016-10-25 11:39:57 +02:00
zmagod
6a328969f0 reset current_user if the user leaves the team [fixes SCI-599] 2016-10-25 09:53:02 +02:00
zmagod
24b81c96f6 sets current_organization_id if no current_organization is available for current_user, hides separator if only one team present [fixes SCI-608] 2016-10-24 21:20:41 +02:00
zmagod
e02132578a first run 2016-10-24 20:07:20 +02:00
Luka Murn
b13fd22408 Add back the release notes URL to navbar 
Closes SCI-604
 2016-10-24 16:59:32 +02:00
Zmago Devetak
12c77df883 Merge pull request #237 from ZmagoD/zd_SCI_593_v2 
Styled global team switch and search [fixes SCI-593]
 2016-10-21 16:28:50 +02:00
zmagod
9a4603dd7d removed unneeded css 2016-10-21 16:27:53 +02:00
Luka Murn
388e092bbf Merge pull request #238 from Ducz0r/lm-sci-596-fix 
SCI-596 fix
 2016-10-21 11:59:01 +02:00
zmagod
49d3879642 fixes padding on mobile, added separator on team switch dropdown, focus search input 2016-10-21 11:46:59 +02:00
Zmago Devetak
4f5b7ad8ad Merge pull request #228 from ZmagoD/zd_SCI_585 
Removes archived projects from index page [fixes SCI-585]
 2016-10-21 11:33:01 +02:00
Luka Murn
7b825a217f Closes SCI-596 2016-10-21 11:08:47 +02:00
Zmago Devetak
af0e9b99b6 Merge pull request #233 from ZmagoD/zd_SCI_591 
Move tooltip to the right [fixes SCI-591]
 2016-10-21 10:38:25 +02:00
okriuchykhin
f876ade05e Merge pull request #236 from okriuchykhin/ok_SCI_557 
Fixes issue with new comments and date separator SCI-557
 2016-10-21 10:29:46 +02:00
Oleksii Kriuchykhin
5be7904f5a Fix hound warnings [SCI-557] 2016-10-21 09:37:24 +02:00
zmagod
c642e208dd styled global team switch and search [fixes SCI-593] 2016-10-21 09:33:18 +02:00
zmagod
db806f3c10 hide private projects 2016-10-21 09:06:19 +02:00
Zmago Devetak
f615b3da41 Merge pull request #230 from ZmagoD/zd_SCI_586 
Adds new team button to team switch dropdown [fixes SCI-586]
 2016-10-21 08:29:05 +02:00
Oleksii Kriuchykhin
0c1ff06f21 Fixes issue with new comments and date separator SCI-557 2016-10-20 22:33:15 +02:00
Zmago Devetak
094e989af5 Merge pull request #227 from ZmagoD/zd_SCI_587 
Removes org selector form project archive [fixes SCI-587]
 2016-10-20 16:32:46 +02:00
zmagod
9214adc591 fixed team name position 2016-10-20 15:35:09 +02:00
mlorb
fa4f3fb0a0 Merge pull request #220 from mlorb/ml_sci_462 
fix multiplication of edit comment fields [SCI-462]
 2016-10-20 15:14:31 +02:00
zmagod
f9fb4d8bd6 move tooltip to the right [fixes SCI-591] 2016-10-20 14:34:45 +02:00
Oleksii Kriuchykhin
347216183f Fixes different color of buttons in notifications settings [SCI-590] 2016-10-20 14:17:07 +02:00
zmagod
f21c9e394f adds new team button to team switch dropdown [fixes SCI-586] 2016-10-20 13:47:41 +02:00
zmagod
4c086a6fc1 removes archived projects from index page [fixes SCI-585] 2016-10-20 13:13:44 +02:00
zmagod
8aaf58f75f removes org selector form project archive [fixes SCI-587] 2016-10-20 12:50:55 +02:00
Luka Murn
640a575a3a Merge pull request #222 from biosistemika/modular-tasks 
Merge global team switch into master
 2016-10-18 11:39:09 +02:00
zmagod
76f6e30078 fixes word-wrap on mozilla 2016-10-17 15:36:33 +02:00
zmagod
557957c857 fixed issue with mozilla browsers 2016-10-17 15:21:19 +02:00
zmagod
54a3237994 displays org name on the project index page if no project 2016-10-17 15:21:19 +02:00
zmagod
8a6899aeea restyled team switch dropdown 2016-10-17 15:21:19 +02:00
zmagod
a116feac9c fixed typos and added truncation to org name 2016-10-17 15:21:19 +02:00
zmagod
1614cbc2b2 fixes repeat tutorial button and localization typos 2016-10-17 15:16:22 +02:00
zmagod
931cba2666 fixes hound [fixes SCI-512] 2016-10-17 15:10:26 +02:00
zmagod
e85ed788f2 fixed user_generator 2016-10-17 15:10:26 +02:00
zmagod
fa36488397 fixed new project form 2016-10-17 15:10:26 +02:00
zmagod
8f24d0d80c fixed new user registration 2016-10-17 15:10:26 +02:00
zmagod
8cd86a50bb styled dropdown 2016-10-17 15:10:26 +02:00
zmagod
3117a464f0 fixed controllers 2016-10-17 15:10:26 +02:00
zmagod
bb9c03df24 fixes controllers 2016-10-17 15:10:26 +02:00
zmagod
d7f514db09 fixes search 2016-10-17 15:10:26 +02:00
zmagod
efe031d766 setup current_organization in all controllers 2016-10-17 15:10:26 +02:00
zmagod
d86a4dd311 setup global team switch view and controller action 2016-10-17 15:10:26 +02:00
Oleksii Kriuchykhin
0ec7c019b3 Fix issue with pop-up windows and turbolinks [SCI-463] 2016-10-17 14:25:54 +02:00
Mojca Lorber
177c4b5918 fix multiplication of edit comment fields 2016-10-17 12:59:51 +02:00
Matej Zrimšek
a31753ea39 Added additional color constants. Fix Ruby color constants RGB format so no errors occur for external Gems. 2016-10-17 11:57:47 +02:00
Matej Zrimšek
f2cd9890dd Replaced hardcoded infinity values with constants. Added quotation marks to Ruby string constants in JS. 2016-10-17 11:57:47 +02:00
Matej Zrimšek
a6a2a237aa Removed unneeded ERB tags, which caused error. Minor refactoring. 2016-10-17 11:57:47 +02:00
Matej Zrimšek
ece89da391 Removed ruby constants duplicates in JS, because of caching problems. 2016-10-17 11:57:47 +02:00
Matej Zrimšek
5966911b92 Fixed Hound alerts. 2016-10-17 11:57:46 +02:00
Matej Zrimšek
778ed8814b Removed some unneeded code. 2016-10-17 11:57:46 +02:00
Matej Zrimšek
05acf5a725 Replaced all Ruby constants instances in JS to be called from JS. 2016-10-17 11:57:46 +02:00
Matej Zrimšek
0780bd2416 Ruby constants are now automatically available in JS. Refactoring was needed. 2016-10-17 11:57:37 +02:00
Matej Zrimšek
a3dfb59558 Added remaining constants. 2016-10-17 11:30:05 +02:00
Matej Zrimšek
21ec05d541 Refactored searches (user and globals earch) and used constants. 2016-10-17 11:17:59 +02:00
Luka Murn
845d487fa1 Merge pull request #218 from Ducz0r/lm-mail-previews 
Add notification mailer preview
 2016-10-13 14:58:04 +02:00
Oleksii Kriuchykhin
c6fb57318f Added use of constants in JS [SCI-530] 2016-10-13 13:06:11 +02:00
Luka Murn
02d3e03f75 Bugfix for notification emails 
The URLs in notification emails didn't get server URL prepended,
so users could not click on them.
 2016-10-13 12:12:28 +02:00
Oleksii Kriuchykhin
37cff75013 Fixes issue with comments options menu [SCI-530] 2016-10-13 12:07:41 +02:00
mlorb
cbc14d9d50 Merge pull request #211 from mlorb/ml_sci_491 
change 80s glow [SCI-491]
 2016-10-13 10:13:14 +02:00
Mojca Lorber
c51aedb178 change thickness of shadow 2016-10-13 10:11:32 +02:00
Luka Murn
bdaeb4db13 Add notification mailer preview 2016-10-13 08:56:04 +02:00
mlorb
78f7879c04 Merge pull request #216 from mlorb/ml_sci_555 
Adding update notifications in settings [SCI-555]
 2016-10-13 08:53:55 +02:00
Mojca Lorber
8f783f87f7 fixes hound 2016-10-12 15:32:40 +02:00
Mojca Lorber
42f6b679f8 Adding system notifications email function in settings 2016-10-12 11:50:26 +02:00
Mojca Lorber
6bea0a9e1a fixes merge conflicts 2016-10-12 10:55:40 +02:00
Luka Murn
cccabcdd7b Remove invitation_to_organization email 
This email is no longer needed, because if user enables
assignment notifications, he/she will already receive an
email whenever he/she is added to a new organization/team (via
notifications email).
 2016-10-12 10:54:36 +02:00
Mojca Lorber
4f1cbad7da adding update notifications in settings 2016-10-12 10:42:07 +02:00
Zmago Devetak
f25767fdc3 Merge pull request #209 from ZmagoD/zd_SCI_534_remove_popup 
Removed introductory popup [fixes SCI-534]
 2016-10-12 08:13:46 +02:00
Zmago Devetak
b225dc1e29 Merge pull request #210 from ZmagoD/zd_SCI_548_protocol_steps_not_visible 
Fixes protocol steps [fixes SCI-548]
 2016-10-12 08:13:28 +02:00
Oleksii Kriuchykhin
4c6a60c249 Added html_safe to notification email template 2016-10-11 16:46:20 +02:00
Oleksii Kriuchykhin
90c853743c Additional fixes to email markup and logic [SCI-443] 2016-10-11 16:43:17 +02:00
Oleksii Kriuchykhin
3f219e1bfe Hound code style fixes [SCI-443] 2016-10-11 16:43:17 +02:00
Oleksii Kriuchykhin
5399033fce Added user settings for email notifications [SCI-443] 2016-10-11 16:43:17 +02:00
Oleksii Kriuchykhin
8dc956010c Initial code commit [SCI-443] 2016-10-11 16:43:17 +02:00
Mojca Lorber
b1b23b8f41 fixes hound 2016-10-11 10:39:00 +02:00
Mojca Lorber
63ec63047d change 80s glow 2016-10-11 10:33:26 +02:00
Zmago Devetak
692b31325b Merge pull request #206 from ZmagoD/zd_SCI_561 
Fixed assinement icon [fixes SCI-561]
 2016-10-11 09:32:47 +02:00
zmagod
ea305b356a fixes protocol steps [fixes SCI-548] 2016-10-11 09:10:12 +02:00
zmagod
42a30576e3 removed introductory popup [fixes SCI-534] 2016-10-11 08:33:50 +02:00
Luka Murn
448daab7c8 Merge pull request #207 from biosistemika/add-deface-hotfix 
Merge hotfix 1.3.1 into master
 2016-10-07 18:26:13 +02:00
zmagod
fe7b367eae fixed hound 2016-10-07 15:25:53 +02:00
zmagod
130db6a2c3 fixed assignment icon [fixes SCI-561] 2016-10-07 12:27:44 +02:00
zmagod
32f03ec94c Add Deface hooks 2016-10-06 16:47:36 +02:00
Jure Grabnar
1f67aec258 Prevent destroying protocols when file is edited 
SCI-552 #close
 2016-10-06 16:13:42 +02:00
Jure Grabnar
b52e596209 Update protocol timestamp on put_file 
SCI-551 #close
 2016-10-06 14:37:42 +02:00
zmagod
0bdf77562d add word-wrap to notrification index page [fixes SCI-556] 2016-10-06 13:49:24 +02:00
zmagod
de00a19dd9 fixes styling in settings preferences [SCI-553] 2016-10-06 13:22:44 +02:00
zmagod
5b3889c172 notification index images [fixes SCI-554] 2016-10-06 12:09:01 +02:00
Luka Murn
5c80c8a817 Add "no notifications" to dropdown & notifications index page 2016-10-05 16:58:21 +02:00
Luka Murn
877574e853 Add link to settings from both notification lists 2016-10-05 16:26:26 +02:00
Luka Murn
56d2240de5 Optimize data query in user_notification.rb 2016-10-05 16:21:13 +02:00
Oleksii Kriuchykhin
083a09c2f7 Add link to notifications index page 2016-10-05 16:13:05 +02:00
okriuchykhin
50f28fe883 Merge pull request #193 from okriuchykhin/ok_global_notifications-SCI-442 
Global notifications screen [SCI-442]
 2016-10-05 16:01:41 +02:00
Oleksii Kriuchykhin
4e2ad1d5e6 Fix the issues after code review [SCI-442] 2016-10-05 15:54:31 +02:00
Oleksii Kriuchykhin
c783e9a03d Code fix after rebase with latest master [SCI-442] 2016-10-05 15:51:11 +02:00
Oleksii Kriuchykhin
d2b48e94bd CSS color fix [SCI-442] 2016-10-05 15:51:11 +02:00
Oleksii Kriuchykhin
868ffd03d6 JS code improvement [SCI-442] 2016-10-05 15:51:11 +02:00
Oleksii Kriuchykhin
246dae4f46 Code style improvements according to hound [SCI-442] 2016-10-05 15:51:11 +02:00
Oleksii Kriuchykhin
8907e54b49 Global notifications index page added [SCI-442] 2016-10-05 15:51:11 +02:00
Oleksii Kriuchykhin
8b5b0723d1 Initial code commit 2016-10-05 15:51:11 +02:00
Zmago Devetak
f3708bcac0 Merge pull request #191 from ZmagoD/zd_SCI_469_ver2 
Comments date duplication
 2016-10-05 15:47:42 +02:00
zmagod
b0f6b1f4d0 fixed comments action on project page 2016-10-05 15:39:54 +02:00
Zmago Devetak
eea310514a Merge pull request #194 from ZmagoD/zd_SCI_531_533 
Notification style fixes
 2016-10-05 15:27:36 +02:00
zmagod
bca3d19562 fixed comment options dropdown position 2016-10-05 15:26:11 +02:00
Zmago Devetak
71ad5bf034 Merge pull request #190 from ZmagoD/zd_SCI_529 
Prepare settings screen for notifications
 2016-10-05 14:54:47 +02:00
Zmago Devetak
c547d8a07a Merge pull request #195 from ZmagoD/zd_SCI_532 
add word wrapping to notifications dropdown [fixes SCI-532]
 2016-10-05 14:54:10 +02:00
zmagod
dfcbebbf4f cleaned up bootstrap extension 2016-10-05 14:49:23 +02:00
okriuchykhin
bfa7e57bd8 Merge pull request #168 from okriuchykhin/ok_SCI-463 
Fixes issue with unexpected notification windows [fixes SCI-463]
 2016-10-05 14:45:23 +02:00
zmagod
9c7a690944 fixed type, fixed settings controller, fixes setting view on mobile devices 2016-10-05 14:33:22 +02:00
zmagod
cba4318185 add word wrapping to notifications dropdown [fixes SCI-532] 2016-10-05 13:22:33 +02:00
zmagod
5bf278298b fixed navbar on sceens smaller than 1000px 2016-10-05 12:22:27 +02:00
zmagod
f9d956bbca fix notifications number on [fixes SCI-531] 2016-10-05 11:50:57 +02:00
zmagod
c4f28c3649 made notification images bigger [fixes SCI-533] 2016-10-05 10:16:51 +02:00
zmagod
848beb5d4b minor fix 2016-10-05 09:46:18 +02:00
zmagod
d7a4f85ba1 added links to notification project name and task 2016-10-05 09:40:44 +02:00
zmagod
d90f17d1eb clean comments date duplication [fixes SCI-469] 2016-10-05 08:42:32 +02:00
Jure Grabnar
62356c36a1 Add file extension to global search 2016-10-04 19:04:08 +02:00
Jure Grabnar
85d2370d28 Change some values to string in CheckFileInfo 2016-10-04 18:19:36 +02:00
Jure Grabnar
3e74c96085 Add wd* params to iframe action url 2016-10-04 18:00:08 +02:00
zmagod
6229e6a3a1 styled notification settings button [fixes SCI-529] 2016-10-04 16:12:56 +02:00
zmagod
a68e7abc57 first run notification settings 2016-10-04 15:52:48 +02:00
Jure Grabnar
0c7cd52dba Add WOPI icons/buttons to files 2016-10-04 12:34:43 +02:00
Luka Murn
61cb9651c7 Merge pull request #188 from biosistemika/global-notifications 
Global notifications
 2016-10-04 08:30:50 +02:00
zmagod
c9bbab1004 added html_safe to outputed message, hide notifications number when dropdown is toggled, clear all unseen notification form count when the dropdown is toggled, generate notification only to other users 2016-10-03 20:31:00 +02:00
Jure Grabnar
72c5824e67 Remove navbar for viewing WOPI files 2016-10-03 20:02:13 +02:00
Jure Grabnar
ec82f64df2 Add WOPI breadcrumbs 2016-10-03 19:45:39 +02:00
Jure Grabnar
1949b1fe88 Add CloseUrl to WOPI 2016-10-03 18:25:01 +02:00
mlorb
00b0f6ab07 Merge pull request #184 from mlorb/ml_sci_472 
Protocol steps/results - change title for comment section, remove info tab [SCI-472]
 2016-10-03 17:20:45 +02:00
Jure Grabnar
03567d6208 Prevent archive of locked result asset 2016-10-03 17:07:57 +02:00
mlorb
153b692c0c Merge pull request #181 from mlorb/ml_sci_321 
Displaying more information for individual samples in Sample table [SCI-321]
 2016-10-03 16:37:35 +02:00
Mojca Lorber
3b0185a45b change title of modal 2016-10-03 16:33:58 +02:00
zmagod
0d23f05698 Merge branch 'global-notifications' of https://github.com/biosistemika/scinote-web into zd_SCI_440 2016-10-03 16:14:22 +02:00
zmagod
36fb2713b3 start fixing comments dates 2016-10-03 16:10:20 +02:00
Zmago Devetak
84313a28a0 Merge pull request #186 from ZmagoD/zd_SCI_441_vol2 
code notifications in toolbar
 2016-10-03 16:09:04 +02:00
Zmago Devetak
91c7d8a952 Merge pull request #176 from ZmagoD/zd_SCI_474 
Unify the comments
 2016-10-03 15:26:17 +02:00
Oleksii Kriuchykhin
a39c948c5f System notifications code rework 2016-10-03 15:21:26 +02:00
Jure Grabnar
f727289935 Add lock check for editing result 2016-10-03 13:43:35 +02:00
zmagod
77df0bc82c cleans more comment link 2016-10-03 12:34:16 +02:00
zmagod
947096862d fixed hound 2016-10-03 11:40:59 +02:00
zmagod
ea17182372 generate notifications [fixes SCI-440] 2016-10-03 11:37:29 +02:00
Mojca Lorber
093fbd6b8e fixes hound again 2016-10-03 10:40:32 +02:00
Mojca Lorber
2041f2a09d fixes hound 2016-10-03 10:15:46 +02:00
Mojca Lorber
053cd8ed84 removes handler 2016-10-03 10:12:13 +02:00
Mojca Lorber
5b32be2137 adding subtitle in modal 2016-10-03 09:28:58 +02:00
zmagod
b9bc2f17c8 fixing hound 2016-10-03 08:27:13 +02:00
zmagod
2ee02ec472 mark all seen notifications 2016-10-03 08:20:23 +02:00
Jure Grabnar
1e14955ade Prevent deleting asset on step update 2016-10-01 18:47:05 +02:00
Jure Grabnar
d9fa882d6a Add check for locked files on step delete 2016-10-01 14:51:55 +02:00
Jure Grabnar
5c9e995e56 Don't delete asset on locked 2016-10-01 13:23:04 +02:00
Jure Grabnar
a2d6d9a29a Add WOPI controlls to result 2016-10-01 11:23:32 +02:00
Jure Grabnar
a6ebff06a7 Add error message to wopi discovery 
Fix ambigious open call
 2016-09-30 10:39:14 +02:00
Oleksii Kriuchykhin
f5cc2fe225 Code style fixes 2016-09-30 09:34:58 +02:00
Luka Murn
f70829d1a9 Merge pull request #179 from okriuchykhin/ok_SCI-380 
Fixes ordering of checklist items in search results [SCI-380]
 2016-09-30 08:28:07 +02:00
Luka Murn
49c5474219 Merge pull request #178 from mz3944/mz_help_button_SCI_13_v2 
Fixed wrong CSS formatting and added release notes link to help link.
 2016-09-30 08:27:57 +02:00
Luka Murn
e32e0a232c Merge pull request #177 from okriuchykhin/ok_SCI-480 
Fixes issue with scrollbar on sidebar [SCI-480]
 2016-09-30 08:25:54 +02:00
Luka Murn
12c9f9a42f Merge pull request #175 from okriuchykhin/ok_SCI-423 
Fix issue with spinner in avatar upload [SCI-423]
 2016-09-30 08:25:15 +02:00
Luka Murn
380d0740f8 Merge pull request #174 from okriuchykhin/ok_SCI-477 
Fix issue with words break in task description and comments [SCI-477]
 2016-09-30 08:25:04 +02:00
Luka Murn
c83342d9f0 Merge pull request #173 from okriuchykhin/ok_SCI-484 
Fix issue with duplicate error messages in experiments modal [SCI-484]
 2016-09-30 08:24:51 +02:00
Luka Murn
b1d25cb18f Merge pull request #172 from ZmagoD/zd_SCI_465 
Generate new experiment img after task restored [fixes SCI-465]
 2016-09-30 08:24:31 +02:00
Oleksii Kriuchykhin
036bda3afa Initial code for system notifications [SCI-444] 2016-09-29 16:51:27 +02:00
Mojca Lorber
35477b1005 Remove Info tab and change comment title on results view 2016-09-29 16:43:19 +02:00
Jure Grabnar
ff47f29dc2 Add wopi file activity 
SCI-393 #close
 2016-09-29 16:16:42 +02:00
zmagod
60a503f115 added assignment image 2016-09-29 16:05:43 +02:00
zmagod
e1a1b93d44 fixed migrations 2016-09-29 14:49:58 +02:00
Mojca Lorber
c9fbf845f1 Remove Info tab and change comment title 2016-09-29 14:37:29 +02:00
Matej Zrimšek
a6324d61c5 Fixed wrong CSS formatting, added release notes link to help links, and links now open in new tab. 2016-09-29 14:27:26 +02:00
Mojca Lorber
5d905f0094 refactoring 2016-09-29 14:18:04 +02:00
Luka Murn
f1b74f1906 Fix image names in introductory popup 
This will make sure browsers don't display old, cached images to clients.
 2016-09-29 13:44:38 +02:00
Jure Grabnar
ed8df3cc62 Add favicon url to iframe 2016-09-29 12:19:29 +02:00
Jure Grabnar
3bc683be8f Fix access_token_ttl calculation 2016-09-29 10:57:08 +02:00
Jure Grabnar
bc22697ebe Take/release space in putfile 2016-09-28 18:02:47 +02:00
Jure Grabnar
5e5f4c5ed4 Add text extraction on unlock 2016-09-28 17:36:53 +02:00
Jure Grabnar
02ddd64aaa Set last_modified_by on put_file 2016-09-28 17:00:19 +02:00
Mojca Lorber
f4345f3aef fixes hound 2016-09-28 16:09:39 +02:00
zmagod
cab1e9b521 start implement toolbar view 2016-09-28 16:03:52 +02:00
Mojca Lorber
efa7a1d7b5 add sample information in pop-up 2016-09-28 15:46:41 +02:00
zmagod
2a86aaf7e4 changed popout content [fixes SCI-520] 2016-09-28 15:12:30 +02:00
zmagod
485497334d generated notification related migrations and model tests 2016-09-28 14:18:52 +02:00
Jure Grabnar
e96e8486ea Add check file permissions to assets controller 
SCI-502 #close
 2016-09-28 09:33:44 +02:00
Jure Grabnar
25c9ec67b3 Check permissions in wopi_controller 2016-09-28 09:33:44 +02:00
Jure Grabnar
5aea0fbb19 Refactor the rest of WOPI logic from Nejc 2016-09-28 09:33:44 +02:00
Jure Grabnar
c1ae4360a3 Refactor WopiController 2016-09-28 09:33:44 +02:00
Jure Grabnar
0c9292e4fc Catch GET_SHARE_URL post file action 2016-09-28 09:33:44 +02:00
Jure Grabnar
3600fbfe64 Fix UnlockUnlockedFile action 
The time was nigh!
 2016-09-28 09:33:44 +02:00
Jure Grabnar
674326e761 Add timestamp WOPI checking 
Change status error code to 500.
 2016-09-28 09:33:44 +02:00
Jure Grabnar
b51f2a3027 Add basic WOPI proof checking 
Still missing validation of timestamp.
Remove web_console gem for testing.
Add relevant tests from manual for WOPI proof.
 2016-09-28 09:33:44 +02:00
Jure Grabnar
0e9756ad94 Fix bad step view rebase 2016-09-28 09:33:44 +02:00
Nejc Bernot
1b260785ec First working version of office integration 
Only works on scinote-preview
 2016-09-28 09:33:44 +02:00
Nejc Bernot
b2b1d5a8f5 Initial commit of WOPI integration 2016-09-28 09:33:44 +02:00
zmagod
dad0d3868b fixing hound 2016-09-27 17:31:37 +02:00
zmagod
402a77526a cleaned console.log 2016-09-27 16:22:09 +02:00
zmagod
2235778110 fixed project and task comments + fixed date issue 2016-09-27 16:19:31 +02:00
Oleksii Kriuchykhin
366a49f3a1 Fixes ordering of checklist items in search results [SCI-380] 2016-09-27 13:00:51 +02:00
zmagod
0d322eba13 fixed hound 2016-09-27 11:03:10 +02:00
zmagod
4903cb970c removed comments helper 2016-09-27 10:47:18 +02:00
Oleksii Kriuchykhin
f9e5d204bb Fixes issue with scrollbar on sidebar [SCI-480] 2016-09-27 10:43:07 +02:00
zmagod
1eb9f772f4 refactor sciNote comments js and unified all comments behavior [fixes SCI-474] 2016-09-27 10:30:48 +02:00
zmagod
1cdfde827f fixes protocol and results comments 2016-09-27 09:26:25 +02:00
zmagod
980ff63104 fixed task comments 2016-09-27 09:18:46 +02:00
Oleksii Kriuchykhin
792f949a61 Fix issue with spinner in avatar upload [SCI-423] 2016-09-27 09:12:31 +02:00
zmagod
02bfa1949e fixed project comments 2016-09-27 09:00:02 +02:00
Oleksii Kriuchykhin
908ee05a23 Fix issue with words break in task description and comments [SCI-477] 2016-09-26 16:03:22 +02:00
Oleksii Kriuchykhin
8a3a9451e9 Fix issue with duplicate error messages in experiments modal [SCI-484] 2016-09-26 12:58:22 +02:00
zmagod
30a8f52216 generate new experiment img after task restored [fixes SCI-465] 2016-09-26 09:48:49 +02:00
Mojca Lorber
cc5cdf2577 Merge branch 'master' of https://github.com/biosistemika/scinote-web into ml_sci_321 2016-09-26 09:39:05 +02:00
Oleksii Kriuchykhin
db1e24202a Minor code cleanup [fixes SCI-463] 2016-09-26 09:08:38 +02:00
Mojca Lorber
c2b742374f adding popup sample info 2016-09-23 17:45:02 +02:00
mz3944
1c1a7c231e Merge pull request #169 from mz3944/mz_help_button_SCI_13 
Added help dropdown. [SCI-13]
 2016-09-23 13:04:38 +02:00
okriuchykhin
4f0fb7074b Merge pull request #167 from okriuchykhin/ok_SCI-470 
Fix issue with long tags in dropdown list [fixes SCI-470]
 2016-09-23 13:00:06 +02:00
Matej Zrimšek
fc86b7b1fd Added help dropdown. [SCI-13] 2016-09-23 12:52:38 +02:00
Oleksii Kriuchykhin
2c144aa2f3 Fix issue with unexpected notification windows appearing after report editor exit [fixes SCI-463] 2016-09-23 11:56:13 +02:00
Oleksii Kriuchykhin
e8ac754829 Fix issue with long tags in dropdown list [fixes SCI-470] 2016-09-23 11:05:17 +02:00
okriuchykhin
a7f3f793c8 Merge pull request #161 from okriuchykhin/ok_SCI-380 
Fixes issue with reordering of checklist items [fixes SCI-380]
 2016-09-23 10:37:56 +02:00
okriuchykhin
5896cdc4bc Merge pull request #158 from okriuchykhin/ok_SCI_314 
Fixes issue with import of empty protocol [fixes SCI-314]
 2016-09-23 10:37:35 +02:00
Zmago Devetak
2b678998d3 Merge pull request #166 from ZmagoD/zd_SCI_471 
fixes load comments [fixes SCI-471]
 2016-09-23 09:17:27 +02:00
zmagod
4f2df691ba add error validations 2016-09-23 08:34:39 +02:00
zmagod
6143b257d0 fixes edit modal [fixes SCI-467] 2016-09-23 08:32:46 +02:00
Matej Zrimšek
0317872bc0 Added check if no comments are present for file result, which caused JS error. 2016-09-22 18:12:35 +02:00
mz3944
cde7f3805f Merge pull request #165 from mz3944/mz_replace_hardcoded_values_with_constants_v2 
Added missing validation for protocol description.
 2016-09-22 17:36:18 +02:00
Matej Zrimšek
13e886f7a9 Removed unneeded upper case for errors which had them, along with their refactoring. [fixes SCI-408] 2016-09-22 17:35:23 +02:00
okriuchykhin
087ee08976 Merge pull request #164 from okriuchykhin/ok_SCI-400 
Fixes issue with new experiment modal and with move of experiments [fixes SCI-400]
 2016-09-22 17:01:58 +02:00
Oleksii Kriuchykhin
841e495234 Fix brace position [fixes SCI-380] 2016-09-22 16:48:15 +02:00
okriuchykhin
b5c861583d Merge pull request #157 from okriuchykhin/ok_SCI_430 
Fixes issue with unneeded sort icon [fixes SCI-430]
 2016-09-22 16:39:26 +02:00
Oleksii Kriuchykhin
28ab599373 Change double quotes to single [fixes SCI-314] 2016-09-22 16:36:37 +02:00
okriuchykhin
729cbef27b Merge pull request #156 from okriuchykhin/ok_SCI-459 
Fixes issue with too many " | " signs in error message [fixes SCI-459]
 2016-09-22 16:12:17 +02:00
okriuchykhin
37eedf17a0 Merge pull request #155 from okriuchykhin/ok_SCI-451 
Fixes issue with zoom buttons on canvas [fixes SCI-451]
 2016-09-22 16:11:45 +02:00
Matej Zrimšek
09405c667e Added missing validation for protocol description. [SCI-408] 2016-09-22 15:52:12 +02:00
Oleksii Kriuchykhin
0dd1196ae5 Fixes issue with move of experiments between projects [fixes SCI-400] 2016-09-22 15:10:15 +02:00
zmagod
303cb4308a fixes load comments [fixes SCI-471] 2016-09-22 13:46:27 +02:00
Oleksii Kriuchykhin
b334b037f8 Fixes issue with old data in modal fields [fixes SCI-400] 2016-09-22 10:54:03 +02:00
Matej Zrimšek
c614843044 Minor refactoring with hound alert fixes. 2016-09-21 19:48:18 +02:00
Matej Zrimšek
234918a76d Word wrapping and truncating added to whole application [fixes SCI-458]. Fixed some bugs which were related to long/too long text and validations. Modified parts of application to accomodate for longer text limits. 2016-09-21 19:48:18 +02:00
Matej Zrimšek
c6a23aab98 Added missing validations for text fields. Added text trimming, which removes spaces from beginning and ending of text. [fixes SCI-408] 2016-09-21 19:37:36 +02:00
Zmago Devetak
5fedcb4be2 Merge pull request #160 from ZmagoD/zd_SCI_464 
Fixes restore experiment error [fixes SCI-464]
 2016-09-21 19:24:33 +02:00
zmagod
06b1992e94 Merge branch 'zd_SCI_436' of https://github.com/ZmagoD/scinote-web into ZmagoD-zd_SCI_436 2016-09-21 19:20:55 +02:00
zmagod
8a8bf10f08 clean up flash label 2016-09-21 19:09:57 +02:00
Oleksii Kriuchykhin
011bb2d910 Fixes issue with reordering of checklist items [fixes SCI-380] 2016-09-21 14:06:47 +02:00
zmagod
bf8e2a208f fixes restore experiment error [fixes SCI-464] 2016-09-21 08:34:32 +02:00
zmagod
2bfe8f0636 fixing hound 2016-09-21 08:16:23 +02:00
zmagod
9f56df02d2 removes comment tab and add comment in the info tab [fixes SCI-436] 2016-09-20 18:53:51 +02:00
zmagod
42bbc47f5f first working version 2016-09-20 17:06:07 +02:00
zmagod
da86208441 styled step comments 2016-09-20 14:13:40 +02:00
Oleksii Kriuchykhin
9b7360eebf Fixes issue with import of empty protocol [fixes SCI-314] 2016-09-20 13:41:29 +02:00
zmagod
0ca65aeca5 fixed step comment sorting 2016-09-20 13:31:50 +02:00
Oleksii Kriuchykhin
411ee4ee77 Fixes issue with unneeded sort icon [fixes SCI-430] 2016-09-20 11:30:11 +02:00
zmagod
cd64e035c0 set form validations 2016-09-20 09:50:03 +02:00
zmagod
f48553e807 fixed ajax call 2016-09-19 16:12:07 +02:00
Oleksii Kriuchykhin
3f0a2c7dfc Fixes issue with too many " | " signs in error message [fixes SCI-459] 2016-09-19 13:53:24 +02:00
Oleksii Kriuchykhin
a3b00d0ff8 Fixes issue with zoom buttons on canvas [fixes SCI-451] 2016-09-16 16:27:54 +02:00
Matej Zrimšek
ffe6799313 Fixed hound alerts. 2016-09-16 15:57:54 +02:00
Matej Zrimšek
dd6e8a3a9a Added step name word wrapping (needs to be improved). 2016-09-16 15:57:54 +02:00
Matej Zrimšek
20ca37f185 Readded client-side result's comment validation. 2016-09-16 15:57:54 +02:00
Matej Zrimšek
c2f0106993 Replaced hardcoded values with unified constants. Minor refactoring. Also front-end error handling was updated accordingly. [fixes SCI-408] 2016-09-16 15:56:44 +02:00
zmagod
938aa32190 js tweaks 2016-09-16 15:22:24 +02:00
zmagod
635f6b92d6 fixed comments display 2016-09-16 11:55:10 +02:00
Zmago Devetak
431227c0a4 Merge pull request #147 from maslick/resultCommentsError1000Chars 
Fixed: Comments in results have no error message if the text exceeds 1000 characters
 2016-09-16 09:38:38 +02:00
zmagod
b9b466cd8e Merge branch 'jg_sci_350_formulas' of https://github.com/jbargu/scinote-web into jbargu-jg_sci_350_formulas 2016-09-16 09:28:19 +02:00
mz3944
556238f39f Merge pull request #150 from mz3944/mz_local_file_upload_fix 
URL presigning is now used only when using S3 file uploading (caused …
 2016-09-16 09:17:23 +02:00
zmagod
e90f0bd3d5 refactor step view 2016-09-16 09:04:21 +02:00
Zmago Devetak
01656c1018 Merge pull request #153 from ZmagoD/zd_SCI_448 
Wrong name of experiment and task - gets undefined as prefix
 2016-09-15 15:00:34 +02:00
mlorb
587369e7a6 Merge pull request #152 from mlorb/ml_sci_428 
fixes responsiveness on mobile phone for sample view [SCI-428]
 2016-09-15 12:11:48 +02:00
Zmago Devetak
7c4a62d138 Merge pull request #139 from ZmagoD/zd_SCI_410 
fixed moved experiment thumbnail [fixes SCI-410]
 2016-09-15 11:58:48 +02:00
zmagod
779b713148 refactor code 2016-09-15 11:55:02 +02:00
zmagod
0a2ab57e28 styled new comments layout 2016-09-15 11:45:51 +02:00
zmagod
d146970f6b add generate workflow image method for moved modules 2016-09-15 09:32:29 +02:00
zmagod
e3ae22763e removed comments tab in protocol step 2016-09-15 08:46:14 +02:00
mlorb
098e17c0d8 Merge pull request #149 from mlorb/ml_sci_420 
fixes links and missing experiment level in search results [SCI-420]
 2016-09-14 15:42:16 +02:00
Zmago Devetak
d0a180a1e8 Merge pull request #148 from ZmagoD/zd_SCI_342 
fixes sidebar expanded elements when adding new experiments
 2016-09-14 13:48:34 +02:00
Mojca Lorber
65415415b6 fixes hound again again 2016-09-14 11:37:17 +02:00
Mojca Lorber
386cedda71 fixes hound again 2016-09-14 11:34:24 +02:00
Mojca Lorber
aba5305cd6 fixes hound 2016-09-14 11:24:19 +02:00
zmagod
c4fabdb67a clean unneeded Observer configurations 2016-09-14 11:16:42 +02:00
zmagod
e1d871dcdb clear undefind from experiment name and refactor sidebar in reports [fixes SCI-448] 2016-09-14 11:11:35 +02:00
Mojca Lorber
a9029e0928 fixes responsiveness on mobile phone for sample view 2016-09-14 11:08:40 +02:00
mz3944
ea898ed3ce Merge pull request #145 from mz3944/mz_checklists_items_move_and_step/result_comment_fix 
Fixed step's checklist items editing (items not multiplying and new i…
 2016-09-13 19:05:10 +02:00
Matej Zrimšek
76ff34a8a9 URL presigning is now used only when using S3 file uploading (caused error for local uploading) [fixes SCI-447], along with some refactoring. 2016-09-13 18:56:47 +02:00
Mojca Lorber
36378d03e2 fixes links and missing experiment level in search results 2016-09-13 17:13:58 +02:00
zmagod
d5c5c55bf2 refactor 2016-09-13 16:32:33 +02:00
Zmago Devetak
b26bf7b183 Merge pull request #136 from ZmagoD/zd_SCI_370 
Enabled to delete results in task archive [fixes SCI-370]
 2016-09-13 15:22:08 +02:00
zmagod
29a2904513 fixed moving action of workflows and tasks 2016-09-13 14:51:53 +02:00
zmagod
7c363d5ade fixed security issue 2016-09-13 13:57:31 +02:00
Zmago Devetak
319893bf81 Merge pull request #143 from ZmagoD/zd_SCI_372 
Set move and clone permissions
 2016-09-13 13:37:23 +02:00
zmagod
3d5a42cc27 refactor results controller 2016-09-13 13:26:04 +02:00
zmagod
222ddf7438 fixed houd error 2016-09-13 13:26:04 +02:00
zmagod
691ae94d2c enabled to delete results in task archive [fixes SCI-370] 2016-09-13 13:26:04 +02:00
zmagod
65383f1824 fixes sidebar expanded elements when adding new experiments [fixes SCI-342] 2016-09-13 13:09:57 +02:00
Pavel Maslov
15ea8fc0dc Bug fixed: comments in results have no error message if the text exceeds 1000 characters. 2016-09-13 12:01:56 +02:00
Zmago Devetak
d37c7b853b Merge pull request #140 from ZmagoD/zd_SCI_341 
adds label to current project in clone experiment modal [fixes SCI-341]
 2016-09-13 11:59:01 +02:00
Zmago Devetak
f86c6b954e Merge pull request #141 from ZmagoD/zd_SCI_340 
styled dottel line in sidebar [fixes SCI-340]
 2016-09-13 11:58:26 +02:00
Jure Grabnar
6519e8dbb1 Add e-notation preprocessing to formulas 
SCI-350 #close
 2016-09-13 09:46:22 +02:00
Jure Grabnar
fa3515d2eb Add formulas to reports 2016-09-13 09:46:21 +02:00
Jure Grabnar
3b364be70b Add formulas to steps tables 2016-09-13 09:44:17 +02:00
Jure Grabnar
5c88bdeeae Add formulas for readonly results tables 2016-09-13 09:44:17 +02:00
Jure Grabnar
e096f936f9 Add formulas to results 2016-09-13 09:44:17 +02:00
Matej Zrimšek
af8ab3e081 Fixed step's checklist items editing (items not multiplying and new item insertion always at bottom) [fixes SCI-427]. Improved step/result comment GUI [SCI-446]. 2016-09-12 16:55:46 +02:00
zmagod
1b31f8827d set experiment description to 255 2016-09-08 14:35:52 +02:00
Zmago Devetak
1368716aa0 Merge pull request #130 from ZmagoD/zd_SCI_348 
project overview - updating (or creating new) experiment details
 2016-09-08 12:49:35 +02:00
mlorb
f4029a04fd Merge pull request #142 from mlorb/ml_sci_415 
fixes navbar size when resizing window [SCI-415]
 2016-09-08 12:46:36 +02:00
Matej Zrimšek
6eca3661bf Some JS error refactoring and accordingly updated error rendering when experiment description is too long. 2016-09-08 12:43:31 +02:00
Mojca Lorber
0435011fee fixes hound 2016-09-08 12:43:30 +02:00
Mojca Lorber
302a777615 fixes button collision 2016-09-08 12:37:06 +02:00
zmagod
faed0500c7 set move and clone permissions to also validate the user on the organizational level [fixes SCI-372] 2016-09-08 09:23:29 +02:00
Mojca Lorber
4c66ca6f80 fixes navbar size when resizing window 2016-09-08 09:17:58 +02:00
Matej Zrimšek
40355dcc97 If file is recognized as office file, it's allowed to be any office file type. 2016-09-07 14:04:11 +02:00
Luka Murn
0c1759c15a Merge pull request #135 from Ducz0r/lm-sci-397 
Resize archived experiment panels
 2016-09-07 11:14:53 +02:00
mz3944
d3a3dd4428 Merge pull request #138 from mz3944/mz_result_edit_and_name_length_check_fix 
Fixed result file deletion and result name updating [fixes SCI-409]. …
 2016-09-07 11:07:23 +02:00
mz3944
5f446ab1f0 Merge pull request #134 from mz3944/mz_delete_step_file_fix 
Fixes files deletion when rails worker is running [fixes SCI-411] and…
 2016-09-07 11:00:50 +02:00
zmagod
d92597ac30 styled dottel line in sidebar [fixes SCI-340] 2016-09-07 09:01:40 +02:00
zmagod
d482dff2e6 adds label to current project in clone experiment modal [fixes SCI-341] 2016-09-07 08:26:36 +02:00
zmagod
487d3e18f4 fixed moved experiment thumbnail [fixes SCI-410] 2016-09-07 07:55:45 +02:00
Matej Zrimšek
b0ad6d0753 Fixed result file deletion and result name updating [fixes SCI-409]. Fixed step name and checklists names and its items names checking, and items removing [fixes SCI-407]. 2016-09-06 23:26:00 +02:00
zmagod
daa144ce7c added missing bracket 2016-09-06 11:57:03 +02:00
zmagod
856d226946 fixed move experiment form error duplication 2016-09-06 11:48:56 +02:00
zmagod
a5a24c7610 clear unused variable 2016-09-06 11:46:28 +02:00
zmagod
b672d85405 fixed error message duplication 2016-09-06 11:46:28 +02:00
zmagod
b44a284b54 sets edit experiment validation 2016-09-06 11:46:28 +02:00
zmagod
9d469f9092 sets front end validation for new experiment modal [fixes SCI-348] 2016-09-06 11:44:03 +02:00
zmagod
de6c03a73b setup experiment modal input validation 2016-09-06 11:44:03 +02:00
Zmago Devetak
9440371f3f Merge pull request #131 from ZmagoD/zd_SCI_400 
Sets front end validation for experiment move action [fixes SCI-400]
 2016-09-06 11:39:38 +02:00
zmagod
c526cab498 removed commented code 2016-09-06 11:38:02 +02:00
mlorb
f0e28b90a0 Merge pull request #133 from mlorb/ml_sci_415 
minimize buttons on mobile phone [SCI-415]
 2016-09-06 11:26:32 +02:00
Luka Murn
bda5120548 Resize archived experiment panels 
Closes SCI-397.
 2016-09-06 10:55:05 +02:00
Matej Zrimšek
9fb30c7661 Fixes files deletion when rails worker is running [fixes SCI-411] and fixes picture's style files deletion. 2016-09-06 10:40:01 +02:00
Mojca Lorber
47983812e7 minimize buttons on mobile phone 2016-09-06 10:10:49 +02:00
Zmago Devetak
1a19753df9 Merge pull request #128 from ZmagoD/zd_SCI_105 
Trim long words in reports [fixes SCI-105]
 2016-09-06 10:10:06 +02:00
zmagod
a7b6135b2f cleared console.log 2016-09-06 10:08:32 +02:00
Luka Murn
81883911c4 Merge pull request #132 from Ducz0r/lm-sci-228 
Updates to invite users to team modal window
 2016-09-05 15:53:15 +02:00
mlorb
aea288371f Merge pull request #129 from mlorb/ml_sci_310 
adds tasks, experiment and project category in protocol search results [SCI-310]
 2016-09-05 15:31:35 +02:00
Luka Murn
1d8600b39f Fix bug when inviting existing users onto teams 
Closes SCI-228
 2016-09-05 14:52:56 +02:00
mz3944
50e0c26e89 Merge pull request #125 from mz3944/mz_removed_avatar_upload_popop_sci_399 
Popup for preventing page leaving when uploading avatar fixed [fixes SCI-399]
 2016-09-05 11:49:04 +02:00
Mojca Lorber
6a802e9fa7 fixes redirection to project page for all categories in search results 2016-09-05 11:40:49 +02:00
Mojca Lorber
740392c687 optimization 2016-09-05 10:58:37 +02:00
zmagod
667fb67052 sets front end validation for experiment move action [fixes SCI-400] 2016-09-02 16:31:17 +02:00
Zmago Devetak
fb6bc31bec Merge pull request #127 from ZmagoD/zd_SCI_247_again 
Table from step stays in report, although it is deleted from step.
 2016-09-02 15:59:17 +02:00
Zmago Devetak
ea26a532e4 Merge pull request #126 from ZmagoD/zd_SCI_332 
By default all experiments should be collapsed
 2016-09-02 15:58:03 +02:00
Mojca Lorber
6763d8e7a1 fixes hound again 2016-09-02 11:56:32 +02:00
Mojca Lorber
4bce00ac61 fixes hound 2016-09-02 11:54:20 +02:00
Mojca Lorber
83034f705d adds tasks, experiment and project category in protocol search results 2016-09-02 11:45:54 +02:00
zmagod
28fa00c30c trim long words in reports [fixes SCI-105] 2016-09-01 15:45:39 +02:00
zmagod
4afaa50ce0 fixed multiple tables check 2016-09-01 13:49:12 +02:00
zmagod
111cb81d08 clear tables from report [fixes SCI-247] again 2016-09-01 13:38:09 +02:00
Luka Murn
61f4fbd1d4 Remove warning info when removing pending user from organization 2016-09-01 13:23:53 +02:00
zmagod
ac7ac95da8 [fixes SCI-332] 2016-09-01 10:38:20 +02:00
Matej Zrimšek
4fdf478426 Minor refactoring. 2016-08-31 17:57:06 +02:00
Matej Zrimšek
828eebeb16 Popup for preventing page leaving when uploading avatar fixed [fixes SCI-399] 2016-08-31 17:21:17 +02:00
zmagod
55ba2de41f fixes object duplication 2016-08-31 16:34:08 +02:00
zmagod
fabfa83171 introdutory popup cookie 2016-08-31 15:18:21 +02:00
zmagod
e8f971829a added project to session storage 2016-08-31 15:13:17 +02:00
Luka Murn
5cb79f6282 Fix the default parameters in JS 
This was causing major issues in IE.
 2016-08-31 14:04:45 +02:00
zmagod
eb394ce209 fixes searching tables bug [fixes SCI-402] 2016-08-31 11:01:10 +02:00
zmagod
b05c3df4d3 adds toggle id only to elements with modules 2016-08-31 10:25:40 +02:00
zmagod
eb39eedfdf [fixes SCI-398] again 2016-08-31 08:46:51 +02:00
zmagod
21f84bacb6 set sidebar collapsed elements 2016-08-31 08:24:59 +02:00
jbargu
2cd5d85d68 Merge pull request #120 from jbargu/jg_SCI_328_move_experiment_reconnect 
When moving a task, it should connect the source and destination
 2016-08-30 18:01:38 +02:00
mlorb
905acfd43d Merge pull request #109 from mlorb/ml_sci_286 
fixes notification when adding new sample [SCI-286]
 2016-08-30 17:54:45 +02:00
Mojca Lorber
dd8e5d5e12 fixes hound 2016-08-30 17:12:26 +02:00
Mojca Lorber
1b1e6daa21 fixes notification disappearance and error notifications 2016-08-30 16:55:59 +02:00
Jure Grabnar
9a82e7d72b Connect tasks on moving 
SCI-328 #close
 2016-08-30 15:57:27 +02:00
mlorb
8fc29248b3 Merge pull request #119 from mlorb/ml_sci_396 
fixes missing experiment name in side bar [SCI-396]
 2016-08-30 15:05:04 +02:00
Zmago Devetak
11b314fa20 Merge pull request #107 from ZmagoD/zd_bug_fix 
fixes new task button after tutorial ends
 2016-08-30 15:04:11 +02:00
Zmago Devetak
375a72db18 Merge pull request #114 from ZmagoD/zd_SCI_294_vol2 
fixes reports file name [fixes SCI-294]
 2016-08-30 14:59:07 +02:00
Zmago Devetak
5b4eb07960 Merge pull request #118 from ZmagoD/zd_SCI_398 
fixes workflow img bug [fixes SCI-398]
 2016-08-30 14:55:33 +02:00
Mojca Lorber
52f228725a fixes hound 2016-08-30 14:04:47 +02:00
Mojca Lorber
aeda6f77d2 fixes missing experiment name in side bar 2016-08-30 13:51:16 +02:00
zmagod
a947354fb5 fixes update times [fixes SCI-398] 2016-08-30 13:23:48 +02:00
Luka Murn
c6e575bd2a Merge pull request #115 from Ducz0r/lm-deleting-comments-fix 
Fix for deleting comments
 2016-08-30 13:15:35 +02:00
Luka Murn
2b382fee0f Merge pull request #113 from Ducz0r/lm-add-first-time-activities 
Fix first time data generator & fake data generator
 2016-08-30 13:07:52 +02:00
Luka Murn
0e0228cb8c Codestyle fixes 2016-08-30 13:06:49 +02:00
zmagod
95ab35e3d6 cleanup update timestamp 2016-08-30 12:58:52 +02:00
Mojca Lorber
43c3a0bb81 fixes merge again 2016-08-30 12:54:08 +02:00
Mojca Lorber
81f9e59dcd fixes merge 2016-08-30 12:14:15 +02:00
Mojca Lorber
e8d187b5f6 Merge branch 'ml_sci_395' 
Conflicts:
	app/views/canvas/edit/modal/_move_module.html.erb
	app/views/canvas/edit/modal/_move_module_group.html.erb
 2016-08-30 11:41:25 +02:00
Luka Murn
77ec5bcff9 Reposition comment dropdowns horizontally if needed 
Closes SCI-258
 2016-08-30 11:39:50 +02:00
zmagod
f356acb882 fixes reports file name [fixes SCI-294] 2016-08-30 11:36:39 +02:00
Zmago Devetak
6878adda46 Merge pull request #112 from ZmagoD/zd_SCI_338_vol2 
Tutorial
 2016-08-30 11:07:51 +02:00
Luka Murn
4ee4c6caba Remove JS validator from step comments 2016-08-30 11:06:30 +02:00
jbargu
fa357dd54f Merge pull request #110 from jbargu/jg_SCI_328_move_task_no_experiment 
Remove move on empty experiments
 2016-08-30 11:06:16 +02:00
zmagod
4b6567e488 fixed workflowimg link 2016-08-30 11:03:33 +02:00
zmagod
6f1c4df942 fixed new task button in canvas 2016-08-30 10:48:28 +02:00
Zmago Devetak
e96429409e Merge pull request #108 from ZmagoD/zd_SCI_247_vol2 
Fixes step destroing bug and fixes reports [fixes SCI-247]
 2016-08-30 09:57:56 +02:00
zmagod
57c1707e81 fixes secondary navigation [fixes SCI-338] 2016-08-30 09:53:56 +02:00
Luka Murn
c86d21d689 Fix bug in organization.rb 
Bug was related to introduction of experiment level.
 2016-08-30 09:46:54 +02:00
Mojca Lorber
a35bf7182f fixes troubles 2016-08-30 09:43:39 +02:00
Mojca Lorber
596d403d5f change position of buttons 2016-08-30 09:16:53 +02:00
zmagod
d33bb50519 disabled secondary navigation in samples tutorial 2016-08-30 08:57:05 +02:00
zmagod
5518d1cd1e fixed 16 step of tutorial 2016-08-30 08:52:44 +02:00
Jure Grabnar
0c184dcdcf Remove Move button on empty experiments 
SCI-328 #close.
 2016-08-30 08:26:59 +02:00
Luka Murn
30e8e33774 Add comment activities to first time data generator 2016-08-30 08:19:35 +02:00
Mojca Lorber
b07f1af90f fixes hound again again 2016-08-29 17:08:00 +02:00
Mojca Lorber
7f8bb9be53 fixes hound again 2016-08-29 13:59:51 +02:00
Mojca Lorber
60b0d69a72 fixes hound 2016-08-29 13:56:05 +02:00
Mojca Lorber
53cdbc2638 fixes notification when adding new sample 2016-08-29 13:45:54 +02:00
zmagod
17aacc8ff5 fixes step destroing bug and fixes reports [fixes SCI-247] 2016-08-29 12:04:46 +02:00
zmagod
5af9d10c6a fixes new task button after tutorial ends 2016-08-29 11:46:45 +02:00
zmagod
2ac20d1af1 adds new image + new panel title [fixes SCI-336] 2016-08-29 09:28:29 +02:00
Luka Murn
a0311970f8 Add missing commits for showing image and not able to preview 2016-08-26 16:49:32 +02:00
zmagod
d886d05ccb Merge branch 'zd_SCI_338' 2016-08-26 16:32:49 +02:00
Matej Zrimšek
e3a7f45fdf Merge branch 'master' into mz_file_upload_and_client_side_upgrade 
Conflicts:
	app/assets/javascripts/application.js
	app/views/results/_result_asset.html.erb
	app/views/steps/_step.html.erb
 2016-08-26 11:13:40 +02:00
Zmago Devetak
0cfc758f43 Merge pull request #102 from ZmagoD/zd_SCI_336 
implement first time popup logic
 2016-08-26 09:19:36 +02:00
zmagod
b0bd92e3f4 fixed edit action 2016-08-26 09:17:55 +02:00
zmagod
2031c42920 fixed confirmation text 2016-08-26 09:13:45 +02:00
Matej Zrimšek
782d384e26 Spinner now doesn't hide prematurally on file uploading. Some recently introduced bugs quickfixes (report images not showing, locale missplealing, client-side blank tables deletion deleted all tables, error if no asset present in a step). 2016-08-25 22:26:53 +02:00
Matej Zrimšek
04d9163ff6 Paperclip file spoofing corrected/modified. 2016-08-25 18:57:06 +02:00
zmagod
99976722a8 uncomment js file 2016-08-25 18:49:49 +02:00
zmagod
1738ca66d2 one-time introductory popup [fixes SCI-336] 2016-08-25 18:44:21 +02:00
Luka Murn
8018cff02e Merge pull request #103 from Ducz0r/bb_edit_delete_comments 
Edit&delete comments
 2016-08-25 17:18:48 +02:00
mlorb
b1218cb3d6 Merge pull request #59 from biosistemika/ml_sci_244 
fixes tutorial bug of inappropriate window [SCI-244]
 2016-08-25 17:16:45 +02:00
Luka Murn
b533b0aca6 Fix another minor bug 2016-08-25 17:15:53 +02:00
Luka Murn
7cd94e8b0d Fix a minor bug on canvas 2016-08-25 17:09:55 +02:00
Luka Murn
9cd99fc532 Display "no comments" if you delete the last comment 2016-08-25 17:01:30 +02:00
Zmago Devetak
1b21e55fea Merge pull request #100 from ZmagoD/zd_SCI_381 
Adds experiment and team to tag search resuls [fixes SCI-381]
 2016-08-25 15:43:50 +02:00
zmagod
7a47ff6bc5 fixed new task error 2016-08-25 15:30:32 +02:00
zmagod
8ff645fb89 disabled experiment dropdown actions 2016-08-25 15:16:51 +02:00
Zmago Devetak
b090fd8d5b Merge pull request #95 from ZmagoD/zd_SCI_374 
adds edit workflow link if no workflow [fixes SCI-374]
 2016-08-25 14:07:33 +02:00
Luka Murn
a480c8d403 Styling fixes 2016-08-25 13:59:50 +02:00
Luka Murn
6d86a02d7c Add individual permission checks in dropdowns 
Closes SCI-258.
 2016-08-25 13:51:50 +02:00
Luka Murn
8592c13ed4 Remove now obsolote controller actions 2016-08-25 13:51:31 +02:00
Luka Murn
b0d7b9dc75 Generate activities when editing/deleting comments 2016-08-25 13:51:31 +02:00
Luka Murn
24dd25d9f5 Add edit/delete result comment functionality 
Lessons learned during this fix:
Don't use dependant: :destroy on both ends of association
between 2 ActiveRecords, or you will run into stack overflow.
 2016-08-25 13:51:31 +02:00
Luka Murn
bac0455435 Add edit&delete functionality to step comments 
This commit also:
* fixes a bug in permission_helper.rb,
* fixes comments.js a bit,
* adds 2 more re-renders of dropdown position calculations to canvas.js and projects/index.js.
 2016-08-25 13:51:31 +02:00
Luka Murn
512efd3812 Fix 2 lines that were too long 2016-08-25 13:51:31 +02:00
Luka Murn
c92d016f65 Add edit&delete module/task comments functionality 
This required a minor fix of comments.js.
 2016-08-25 13:51:31 +02:00
Luka Murn
f0d9cb96fa Add edit project comments functionality 2016-08-25 13:51:30 +02:00
Luka Murn
15c0baeee8 Add delete project comment functionality 
This commit also removes the old code from @bberic.
 2016-08-25 13:51:30 +02:00
Luka Murn
9e3bb8edb7 Add dependant: :destroy to comments 2016-08-25 13:51:30 +02:00
Luka Murn
8a73a3ab5c Update permission_helper.rb and routes.rb 2016-08-25 13:51:30 +02:00
Luka Murn
319bcc7850 Add permissions for comments to permission_helper.rb 2016-08-25 13:51:30 +02:00
Luka Murn
5569a1e6d2 Revert 2 files that contained no changes 2016-08-25 13:51:30 +02:00
scibb
a76d82d188 delete and edit comments for projects, protocols, results, and workflow elements 2016-08-25 13:51:30 +02:00
zmagod
5fabe06b8d implement first time popup logic 2016-08-25 11:44:49 +02:00
Mojca Lorber
4a5d720724 change position of overview and samples 2016-08-25 11:19:53 +02:00
zmagod
1120ef1407 adds experiment and team to tag search resuls [fixes SCI-381] 2016-08-25 10:40:03 +02:00
mlorb
c38a4e2614 Merge pull request #94 from mlorb/ml_sci_375 
add move experiment instructions [SCI-375]
 2016-08-25 09:45:16 +02:00
Luka Murn
c082bceafc Merge pull request #98 from Ducz0r/lm-sci-385 
Fix bug with linked tasks
 2016-08-25 09:29:50 +02:00
zmagod
f515366d91 fixes workflowing after updating description, fixes canvas bug 2016-08-25 09:11:42 +02:00
mlorb
0a066f436f Merge pull request #96 from mlorb/ml_sci_369 
buttons update on experiment overview [SCI-369]
 2016-08-25 08:54:16 +02:00
zmagod
92bb3dda99 hide last next button 2016-08-25 08:46:11 +02:00
zmagod
dbdbff12eb add experiment level tutorial step [fixes SCI-338] 2016-08-24 19:03:58 +02:00
Luka Murn
3dddffaa34 Fix bug with linked tasks 
This bug was a legacy of experiment level introduction.
Closes SCI-385, SCI-366.
 2016-08-24 17:22:16 +02:00
mlorb
2d90ad1a65 Merge pull request #88 from mlorb/ml_sci_362 
fixes tile size in edit canvas [SCI-362]
 2016-08-24 17:07:11 +02:00
Mojca Lorber
2a897432e1 update buttons on canvas view 2016-08-24 17:00:27 +02:00
jbargu
5c104ac050 Merge pull request #93 from jbargu/jg_sci_378_move_experiment_error 
Fix 404 move experiment error
 2016-08-24 16:35:29 +02:00
Mojca Lorber
d04df349d5 fixes medium and small zoom 2016-08-24 14:18:12 +02:00
Zmago Devetak
0de7ea31ea Merge pull request #90 from ZmagoD/zd_SCI_376 
fixes cloned experiment protocol [fixes SCI-376]
 2016-08-24 14:12:19 +02:00
zmagod
9393a96302 adds edit workflow link if no workflow [fixes SCI-374] 2016-08-24 14:10:50 +02:00
Mojca Lorber
0558d49e26 buttons update on experiment overview 2016-08-24 13:50:25 +02:00
Jure Grabnar
00da7efb44 Merge remote-tracking branch 'origin/jg_SCI_328_moving_workflows' 
Conflicts:
	app/models/experiment.rb

SCI-328 #close
 2016-08-24 13:11:10 +02:00
Zmago Devetak
afaeab492d Merge pull request #87 from ZmagoD/zd_SCI_371 
hide the dropdown if user has no permissions(technician) [fixes SCI-371]
 2016-08-24 11:56:29 +02:00
jbargu
180efac87b Merge pull request #92 from jbargu/jg_exp_overview_navbar_sci_353 
Show whole tree structure for experiment in sidebar
 2016-08-24 11:50:39 +02:00
Jure Grabnar
dff5abf3d9 Fix module moving position not being updated 2016-08-24 11:42:21 +02:00
Mojca Lorber
f554dc6018 add move experiment instructions 2016-08-24 11:36:50 +02:00
Jure Grabnar
3e5e9aed22 Fix 404 on move experiment 
[fixes SCI-378]
 2016-08-24 11:09:03 +02:00
zmagod
27d77bc73f added new permission for dropdown actions 2016-08-24 10:56:30 +02:00
Jure Grabnar
e60533af57 Add whole tree structure for experiment 
SCI-353 #close
 2016-08-24 10:47:30 +02:00
Jure Grabnar
a091571d9c Add consistent links for archive for all entities 2016-08-24 09:14:29 +02:00
Jure Grabnar
0cdb18ffcd Update experiment links on sidebar between actions 2016-08-24 09:05:57 +02:00
Jure Grabnar
a41d851830 Fix secondary navigation for experiment level (overview) 2016-08-24 08:54:02 +02:00
mlorb
5c8d669cac Merge pull request #81 from mlorb/ml_sci_364 
fixes edit experiment [SCI-364]
 2016-08-23 16:49:20 +02:00
Zmago Devetak
396325bd67 Merge pull request #86 from ZmagoD/zd_SCI_365 
changed experiment create redirection [fixes SCI-365]
 2016-08-23 16:30:48 +02:00
Zmago Devetak
9dc7708b73 Merge pull request #85 from ZmagoD/zd_SCI_360 
fixes project overview style and add no description link [fixes SCI-360]
 2016-08-23 16:24:22 +02:00
Zmago Devetak
d67997fa8b Merge pull request #83 from ZmagoD/zd_SCI_347 
Fixes search result link for experiment [fixes SCI-347]
 2016-08-23 16:23:41 +02:00
Zmago Devetak
aa650bbc65 Merge pull request #82 from ZmagoD/zd_SCI_359 
Add plus button at the bottom of project overview page [fixes SCI-359]
 2016-08-23 16:23:20 +02:00
Zmago Devetak
7e2db66f42 Merge pull request #79 from ZmagoD/zd_SCI_345 
Adds font-awesome to pdf [fixes SCI-345]
 2016-08-23 16:22:30 +02:00
Zmago Devetak
65049692ea Merge pull request #78 from ZmagoD/zd_SCI_349 
updating thumbnail
 2016-08-23 16:22:07 +02:00
zmagod
0429816154 deleted commented code 2016-08-23 16:21:11 +02:00
zmagod
2bbb439745 fixes cloned experiment protocol [fixes SCI-376] 2016-08-23 16:15:45 +02:00
Mojca Lorber
126cf0c210 fixes drag connections area 2016-08-23 16:08:05 +02:00
Mojca Lorber
322be64b5f change experiment path 2016-08-23 14:44:22 +02:00
Mojca Lorber
86ed4c18d8 fixes hound 2016-08-23 13:51:20 +02:00
Mojca Lorber
ac68db97b9 fixes tile size in edit canvas 2016-08-23 13:33:10 +02:00
Jure Grabnar
67768c8865 Fix Hound errors 2016-08-23 11:08:10 +02:00
Jure Grabnar
0d56cea3e4 Add placeholders for empty experiments 2016-08-23 10:37:48 +02:00
Jure Grabnar
027193f937 Add links for moving module groups 2016-08-23 10:09:25 +02:00
Jure Grabnar
358f2b1c47 Add moving for newly created modules 2016-08-23 10:00:34 +02:00
zmagod
f918746946 hide the dropdown if user has no permissions(technician) [fixes SCI-371] 2016-08-23 09:26:52 +02:00
zmagod
66b8a3055d changed experiment create redirection [fixes SCI-365] 2016-08-23 09:03:39 +02:00
Jure Grabnar
c0edf51054 Fix bounding box algorithm, can move new modules 2016-08-23 09:00:25 +02:00
zmagod
03a3759cf5 fixes project overview style and add no description link [fixes SCI-360] 2016-08-23 08:52:53 +02:00
Jure Grabnar
8940ba891b Add initial position for moving workflows 2016-08-22 17:52:55 +02:00
Jure Grabnar
667b7671a6 Add connections for moved workflows 2016-08-22 17:26:21 +02:00
zmagod
9a05935067 fixed search result link for experiment [fixes SCI-347] 2016-08-22 15:35:47 +02:00
Mojca Lorber
75c52d20e5 fixes hound 2016-08-22 15:30:27 +02:00
zmagod
8c592753e4 fixes hound 2016-08-22 15:27:11 +02:00
zmagod
bb11999566 adds plus button at the bottom of project overview page [fixes SCI-359] 2016-08-22 15:22:05 +02:00
Mojca Lorber
131d0d269a fixes edit experiment 2016-08-22 15:18:02 +02:00
zmagod
eab05eb9db adds font-awesome to pdf [fixes SCI-345] 2016-08-22 14:40:09 +02:00
zmagod
d38f29d207 set ajax loading of experiments images [fixes SCI-349] 2016-08-22 11:29:19 +02:00
mlorb
ed1cd193ac Merge pull request #77 from mlorb/ml_sci_357 
fixes warning messages when loading a new protocol that is linked with repository [SCI-357]
 2016-08-22 08:56:36 +02:00
mlorb
0832466d20 Merge pull request #76 from mlorb/ml_sci_286 
fixes notifications when creating new sample type or group [SCI-286]
 2016-08-22 08:54:28 +02:00
Mojca Lorber
1c220aba7b delete comment 2016-08-22 08:50:48 +02:00
Jure Grabnar
5bb99adb25 Add frontend logic for moving workflows from canvas 2016-08-19 17:11:17 +02:00
zmagod
b86e67a0d6 refactor initProjectExperiment 2016-08-19 16:38:34 +02:00
Mojca Lorber
fb081be682 fixes warning messages when loading a new protocol that is linked with repository 2016-08-19 16:03:10 +02:00
zmagod
cac5033eba set ajax for workflow img 2016-08-19 15:36:12 +02:00
Zmago Devetak
99aa66cd84 Merge pull request #74 from ZmagoD/zd_SCI_346 
check search input string [fixes SCI-346]
 2016-08-19 14:01:56 +02:00
Mojca Lorber
799cac1238 fixes hound 2016-08-19 13:55:34 +02:00
Jure Grabnar
80498260e5 Add backend for moving task from canvas 2016-08-19 13:53:43 +02:00
Jure Grabnar
f575303d11 Update get_new_position for new canvas size 
SCI-358 #close
 2016-08-19 13:42:28 +02:00
Mojca Lorber
51e0d53b12 remove code duplication 2016-08-19 13:08:35 +02:00
Mojca Lorber
571f5b60f3 fixes notifications appearance and disappearance and content adjustment 2016-08-19 10:48:43 +02:00
Mojca Lorber
5c77167388 update buttons 2016-08-18 16:47:16 +02:00
Mojca Lorber
5695842fe3 fixes notifications when creating sample types and groups 2016-08-18 16:05:15 +02:00
Zmago Devetak
58930f3456 Merge pull request #73 from ZmagoD/zd_SCI_344 
fixes user duplication [fixes SCI-344]
 2016-08-18 13:28:59 +02:00
zmagod
2216a86db5 hound again 2016-08-18 13:27:46 +02:00
zmagod
d3f61bdd18 fixes hound alert 2016-08-18 13:24:44 +02:00
Zmago Devetak
a680b09cc9 Merge pull request #72 from ZmagoD/zd_fix_exl_archive 
fixed experiments archive bug
 2016-08-18 13:16:51 +02:00
Zmago Devetak
fe626a8cb3 Merge pull request #71 from ZmagoD/zd_SCI_294 
Zd sci 294
 2016-08-18 13:16:38 +02:00
zmagod
d62500cb56 check search input string [fixes SCI-346] 2016-08-18 13:14:31 +02:00
zmagod
4b5be7530c fixed task archive 2016-08-18 11:53:57 +02:00
zmagod
da2b9ccf82 fixes user duplication [fixes SCI-344] 2016-08-18 11:26:52 +02:00
zmagod
fa08b861d0 fixed experiments archive bug 2016-08-18 10:55:29 +02:00
Jure Grabnar
6879521a75 Add missing .experiment to can_unlink_protocol 2016-08-18 10:48:44 +02:00
zmagod
6bb8d075e0 truncate asset name in task step and result [fixes SCI-294] 2016-08-18 09:22:12 +02:00
zmagod
072f816286 refactor restore_after_tutorial function 2016-08-18 08:55:40 +02:00
zmagod
f2ee5d73a0 fixed project tutorial bug 2016-08-18 08:53:34 +02:00
Zmago Devetak
b6ccecf478 Merge pull request #69 from ZmagoD/zd_SCI_335 
cleans experiment form report if moved [fixes SCI-335]
 2016-08-18 08:37:09 +02:00
Jure Grabnar
c3074e91de Fix activity in first time generator 2016-08-18 08:33:08 +02:00
mlorb
36d24523b4 Merge pull request #61 from biosistemika/ml_sci_291 
fixes dissapearance of sample type/group when editing samlpe or adding new sample [SCI-291]
 2016-08-18 08:25:31 +02:00
Zmago Devetak
4897e2da0c Merge pull request #68 from ZmagoD/zd_SCI_330 
Zd sci 330
 2016-08-18 08:10:20 +02:00
Zmago Devetak
f2e08db106 Merge pull request #67 from ZmagoD/zd_SCI_337 
Zd sci 337
 2016-08-18 08:06:38 +02:00
Zmago Devetak
d17af4e898 Merge pull request #66 from ZmagoD/zd_SCI_331 
adds active class to experiment name in sidebar [fixes SCI-331]
 2016-08-18 08:06:03 +02:00
Matej Zrimšek
4ad384df5a Fixed hound alerts. 2016-08-17 21:02:05 +02:00
Matej Zrimšek
27a9dac412 File permissions corrected, with some refactoring. 2016-08-17 18:23:24 +02:00
Matej Zrimšek
e4a6a3944e Added deleting of files on S3 server when editing/removing a file. Some refactoring. 2016-08-17 18:13:35 +02:00
Matej Zrimšek
ccdccc5cf1 Changed file uploding to work properly with multiple files and be user friendly in case of errors. Some function names refactoring. 2016-08-17 18:11:13 +02:00
Matej Zrimšek
854ef0d227 Special characters caused error [fixes SCI-315]. 2016-08-17 18:10:47 +02:00
Matej Zrimšek
c87ba5b45c Multiple files upload handling and user experience improved. Spinner now also prevents user from accidentally leaving page. 2016-08-17 18:10:32 +02:00
Matej Zrimšek
951cf67b3d A lot of file uploading edge cases considered. File uploading is now actually redirected to S3 server, as before was not. Error functions changed and error output format specified, which should be used consistently throughout the application. Some other refactoring. 2016-08-17 18:08:21 +02:00
Matej Zrimšek
b70f49f4e0 Some additional refinements. 2016-08-17 18:00:04 +02:00
Matej Zrimšek
86880f0299 Additional changes, refactoring and improvements. 2016-08-17 17:57:54 +02:00
Matej Zrimšek
01aad1764c Some hotfixes to previous commit. Client-side file validation added (except file type validation). Some refactoring. 2016-08-17 17:54:45 +02:00
Matej Zrimšek
e2f94caa96 Step creation is now completelly validated on client-side also, to avoid front-end problems after server-side validation. This was needed as lots of issues were caused by this. Also step creation user experience is enriched and refactoring of related code was done. 2016-08-17 17:54:06 +02:00
Jure Grabnar
78cf4f396e render_403 and 404 now return true 
To prevent any: render_403 and return type of bugs
 2016-08-17 15:46:30 +02:00
Jure Grabnar
77f75fdeb6 Delete module from canvas when moving 2016-08-17 15:46:30 +02:00
Jure Grabnar
0cdea0b51a Add modal for moving task on canvas 2016-08-17 15:46:30 +02:00
zmagod
c27c6c19e5 cleans experiment form report if moved [fixes SCI-335] 2016-08-17 15:21:53 +02:00
zmagod
9fd68c7bd5 fixes 'new experiment' button bug on smaller screens 2016-08-17 14:27:59 +02:00
zmagod
ca0ba1403d set flask icon to experiment [fixes SCI-330] 2016-08-17 14:17:29 +02:00
zmagod
cc2ed32ccb fixes canvas bug when no actions are available for the viewer 2016-08-17 13:29:22 +02:00
zmagod
6c5cc8aac9 fixes notification [fixes SCI-337] 2016-08-17 13:17:40 +02:00
zmagod
8d69ca0b88 adds active class to experiment name in sidebar [fixes SCI-331] 2016-08-17 11:21:48 +02:00
zmagod
d557f3249f Adds single tasks to the experiment img [fixes SCI-329] 2016-08-17 11:13:49 +02:00
Zmago Devetak
da735a51f4 Merge pull request #62 from ZmagoD/zd_SCI_318 
Zd sci 318
 2016-08-17 10:01:10 +02:00
Zmago Devetak
13697e8688 Merge pull request #58 from ZmagoD/zd_SCI_74 
Filter search query for special chars [fixes SCI_74]
 2016-08-17 10:00:47 +02:00
zmagod
4293f9c267 Merge branch 'zd_SCI_271' of https://github.com/ZmagoD/scinote-web into ZmagoD-zd_SCI_271 2016-08-17 09:58:29 +02:00
zmagod
850f5d8dad fixing hound alerts 2016-08-17 09:44:23 +02:00
zmagod
7abc8f3a90 Merge branch 'master' into experiment-level 2016-08-17 09:28:35 +02:00
zmagod
76dd4bc90a fixed protocol status bar [fixes SCI-318] 2016-08-16 10:47:23 +02:00
Zmago Devetak
762b805651 Merge pull request #55 from ZmagoD/zd_papperclip_migration_bug 
fixes migration error
 2016-08-16 10:44:53 +02:00
Zmago Devetak
9b97dad03d Merge pull request #54 from ZmagoD/zd_SCI_39 
fixes loading samples error in blank project
 2016-08-16 10:44:35 +02:00
Jure Grabnar
275106c27c Add check for empty projects on move experiments 2016-08-16 10:20:36 +02:00
Mojca Lorber
7dc0c3672a fixes dissapearance of sample type/group when adding/editing new sample 2016-08-16 10:17:29 +02:00
Jure Grabnar
c16eed5e63 Add missing dropdown_actions.js 2016-08-16 09:48:19 +02:00
zmagod
5e647f62d5 changed import label [fixes SCI-317] 2016-08-16 09:34:04 +02:00
Jure Grabnar
a29b56b0bd Even more candy for our dog 2016-08-16 09:15:29 +02:00
Jure Grabnar
b25a7758db Give a candy to our special dog 2016-08-16 09:10:45 +02:00
Jure Grabnar
042a33f2c7 Add activity for moving 2016-08-16 08:49:24 +02:00
Jure Grabnar
e55c66b3d0 Add query for moveable projects 2016-08-16 08:47:04 +02:00
zmagod
852fe499fb clean up linked protocol 2016-08-12 16:31:40 +02:00
Jure Grabnar
c387439fb2 Fix projects query for experiments 
Remove unneeded word in view
 2016-08-12 11:36:52 +02:00
Mojca Lorber
e6f205368b fixes tutorial bug of inappropriate window 2016-08-12 11:33:27 +02:00
Jure Grabnar
d7341d0383 Set actions/routes/view for move experiment 2016-08-12 11:26:18 +02:00
zmagod
c9ff249067 fixed hound alert 2016-08-12 11:11:52 +02:00
zmagod
6c7cfb4467 filter search query for special chars [fixes SCI_74] 2016-08-12 11:08:51 +02:00
Jure Grabnar
555ed05ae6 Refactor/DRY dropdown actions code for experiment 2016-08-12 10:18:35 +02:00
mlorb
6b17385f3a Merge pull request #56 from biosistemika/ml_sci_302 
fixes problem with split table when generating pdf report [SCI-302]
 2016-08-12 08:55:10 +02:00
mlorb
f3163ea7ce visual corrections 2016-08-12 08:54:14 +02:00
Jure Grabnar
9173c83502 Select current project in clone modal 2016-08-11 17:20:06 +02:00
Jure Grabnar
3c36293770 Add activity for cloning experiment 2016-08-11 17:00:33 +02:00
Jure Grabnar
5c40d04eb2 Add missing clone modal 2016-08-11 16:59:56 +02:00
Jure Grabnar
2f6ccac3bc Add unique experiment name and copy image when cloning 2016-08-11 16:58:31 +02:00
Jure Grabnar
6e8e9ecf21 Fix activities and the dreaded no project for modules error 2016-08-11 16:57:29 +02:00
zmagod
d1f6a0f58d fixed hound 2016-08-11 16:24:44 +02:00
zmagod
701c26a2dd fixed canvas edit and samples tutorial [fixes: SCI-271] 2016-08-11 16:21:55 +02:00
zmagod
a128815122 fixed tutorial tasks on canvas 2016-08-11 16:06:51 +02:00
Mojca Lorber
94915a9ba7 fixes problem with splitted table when generating pdf report [SCI-302] 2016-08-11 15:24:18 +02:00
Jure Grabnar
3b259d34b0 Basic cloning of experiment works 
Still missing:
- cloning of assets
- cloning of experiment image
 2016-08-11 15:13:36 +02:00
zmagod
2e1d81a985 fixed project archive in tutorial 2016-08-11 12:40:16 +02:00
Mojca Lorber
b350dff826 fixes problem with splitted table when generating pdf report [SCI-302] 2016-08-11 10:42:36 +02:00
Jure Grabnar
7f21ae138a Set clone actions/routes/view 
DRY code for showing AJAX on project#show page
 2016-08-11 09:46:15 +02:00
scibb
32699578ed Merge pull request #52 from biosistemika/bb_canvas_fixes 
Bb canvas fixes
 2016-08-11 09:29:21 +02:00
zmagod
060da59bbb fixes migration error 2016-08-11 09:19:12 +02:00
Jure Grabnar
1ca34a7986 Fix result texts/tables 2016-08-10 15:44:33 +02:00
Jure Grabnar
52e6d7d300 Fix step comments 2016-08-10 15:44:33 +02:00
Jure Grabnar
3e72f29bfd Fix uploading of step assets 2016-08-10 15:44:33 +02:00
Jure Grabnar
d69195a4f6 Fix uploading of result assets 2016-08-10 15:44:33 +02:00
zmagod
c866e90b33 Merge branch 'zd_add_image_to_project_preview' of https://github.com/ZmagoD/scinote-web into ZmagoD-zd_add_image_to_project_preview 2016-08-10 11:33:37 +02:00
zmagod
7653f2b9ec fixed hound 2016-08-10 11:26:27 +02:00
Jure Grabnar
b2855d69f6 Fix hound warning 2016-08-10 09:24:06 +02:00
zmagod
deb739efa6 fixes loading samples error in blank project 2016-08-10 09:13:12 +02:00
Jure Grabnar
15d66c7884 Change validation for experiment workimg 2016-08-10 08:58:29 +02:00
Jure Grabnar
7b0f323576 Add expiring URL to experiment img 2016-08-09 16:37:44 +02:00
zmagod
f77e0d4a6e changed workflow image name 2016-08-09 16:27:28 +02:00
zmagod
5583105d8a fixed hound alert 2016-08-09 14:28:55 +02:00
zmagod
5f3a5cb845 fixed project overview 2016-08-09 14:26:08 +02:00
Jure Grabnar
e995165876 Double quotes -> single quotes (#hound) 2016-08-09 13:19:32 +02:00
Jure Grabnar
9f7df0af76 Fix checkbox in experiment reports 2016-08-09 13:13:50 +02:00
zmagod
176aad4c6d fixes multiple graphs rendering 2016-08-09 11:19:07 +02:00
Jure Grabnar
208e85e7e0 Remove archived experiments from reports 2016-08-09 11:17:25 +02:00
Jure Grabnar
1a7a7a1d1a Add info to experiment archive cards 
Also add addtional check for due date on archive experiment
 2016-08-09 11:04:46 +02:00
Jure Grabnar
a0fe31479f Fix permissions for archived experiments 2016-08-09 10:00:44 +02:00
Jure Grabnar
0ca5725f9b Archive/restore of experiments now work 2016-08-08 16:35:45 +02:00
zmagod
1a56396eb5 add workflow image to project overview page [fixes SCI-41] 2016-08-08 16:02:17 +02:00
scibb
696075bf0f smaller grid steps set. In addition enddpoint bug was fixed 
SCI 170, SCI 292'
 2016-08-08 15:18:38 +02:00
Jure Grabnar
5c858ee577 Add missing experiment archive page 2016-08-08 15:04:38 +02:00
Jure Grabnar
2bd74866e0 Fix my_modules archive page 2016-08-08 15:04:02 +02:00
Jure Grabnar
5a023483d7 Prepare views for experiment archive 2016-08-08 14:19:35 +02:00
Jure Grabnar
775a39344c Fix experiment archive permissions 2016-08-08 13:40:08 +02:00
Jure Grabnar
deecbf082c Remove badly merged code 2016-08-08 13:06:20 +02:00
Zmago Devetak
4bd489d29c Merge pull request #46 from ZmagoD/zd_SCI_303 
update sidebar v2 [fixes SCI-303]
 2016-08-08 08:56:01 +02:00
jbargu
3f91e7a476 Merge pull request #47 from biosistemika/jg_explvl_reports 
Update reports with experiment level

[Fixes SCI-35].
 2016-08-08 08:51:23 +02:00
zmagod
520cf2e0cf hound.... 2016-08-08 08:40:24 +02:00
zmagod
e16abe486c fix hound alert 2016-08-08 08:37:22 +02:00
zmagod
756c3c777e styled workflow dots 2016-08-08 08:33:18 +02:00
zmagod
04d171997e Merge branch 'zd_SCI_41' of https://github.com/ZmagoD/scinote-web into ZmagoD-zd_SCI_41 2016-08-05 15:56:21 +02:00
zmagod
9c5c4f0a3a Merge branch 'zd_SCI_44' of https://github.com/ZmagoD/scinote-web into ZmagoD-zd_SCI_44 2016-08-05 15:23:01 +02:00
Mojca Lorber
c691ca63e2 fixing houndci-bot comment 2016-08-05 09:47:06 +02:00
Mojca Lorber
5d137324bc moving and targeting .label class 2016-08-05 09:12:17 +02:00
Jure Grabnar
d9702b6964 Remove unneeded new element 2016-08-05 08:36:06 +02:00
Jure Grabnar
2f0dc57ea6 Fix Hounds warning 2016-08-05 08:29:49 +02:00
Jure Grabnar
a25a4354c6 Fix css, #hound. 2016-08-05 08:05:14 +02:00
Jure Grabnar
cafec6a1b4 Fix controls on experiment contents 
Also fix bug with adjencent elements not updating controls.

Fixes SCI-35.
 2016-08-04 16:05:03 +02:00
Jure Grabnar
8b2b134614 Migrate old reports to new experiment level reports 2016-08-04 13:19:46 +02:00
zmagod
a4ec558596 start to implement project overview page 2016-08-04 12:57:33 +02:00
zmagod
f8f87e9540 Feed the Hound 2016-08-03 16:16:09 +02:00
zmagod
45dac782ca update sidebar [fixes SCI-303] 2016-08-03 16:09:45 +02:00
Jure Grabnar
da2a06c999 Fix global sort to work with experiments 2016-08-03 14:59:53 +02:00
zmagod
fd8187370e Feed the Hound part 3 2016-08-03 13:16:51 +02:00
Jure Grabnar
0c51f7bc8b Saving/editing of reports now works 2016-08-03 13:15:40 +02:00
zmagod
9d4a67a5b6 Feed the Hound 2 2016-08-03 13:11:46 +02:00
zmagod
57ac34e9f4 add samples to experiment page [fixes SCI-43] 2016-08-03 12:57:51 +02:00
Jure Grabnar
964b51f84a Add experiment reports element 2016-08-03 12:52:52 +02:00
Jure Grabnar
aedaf2f30a Adding of experiment content now works in reports 2016-08-03 12:52:52 +02:00
Jure Grabnar
5854e72878 Add experiments_contents action 2016-08-03 12:52:52 +02:00
Jure Grabnar
9092dd6914 Replace all occurences of module_elements 2016-08-03 12:52:52 +02:00
Jure Grabnar
ff081cd844 Simplify project contents dialog 2016-08-03 12:52:51 +02:00
Jure Grabnar
dc82830a8f Add checkbox behaviour to experiment contents 2016-08-03 12:52:51 +02:00
Jure Grabnar
3f33ebe59a Fix wrong closure in experiment contents 2016-08-03 12:52:51 +02:00
Jure Grabnar
acc41dae40 Add experiment content report dialog 
Adding still has to be implemented
 2016-08-03 12:52:51 +02:00
Jure Grabnar
41e8c54aa5 Rename _module_element_controls to element_controls 2016-08-03 12:52:06 +02:00
Jure Grabnar
1e334d9075 Remove unneeded "Add new report element" 2016-08-03 12:52:06 +02:00
Jure Grabnar
d82ba163ed Add experiment to report screen 
Only placeholder for now, JS still needs fixing.
 2016-08-03 12:52:06 +02:00
Jure Grabnar
ac708e7497 Remove no module group from reports 2016-08-03 12:52:06 +02:00
Jure Grabnar
797685fbf0 Remove workflows from project content dialog (report) 2016-08-03 12:52:06 +02:00
Jure Grabnar
daca739262 Add new line to selector for readability 2016-08-03 12:52:06 +02:00
Jure Grabnar
598c5a63fd Add experiment level to project report contents modal 2016-08-03 12:52:05 +02:00
zmagod
d11b0b11e9 Feed the Hound 2016-08-03 09:44:05 +02:00
zmagod
caa80642c0 [fixes SCI-304], [fixes SCI-37] 2016-08-03 09:34:10 +02:00
Mojca Lorber
ffa64445df fixes issue SCI-223 2016-08-02 16:30:07 +02:00
Zmago Devetak
43230384b5 Merge pull request #40 from ZmagoD/zd_SCI_261 
Fixed search query [fixes SCI-261]
 2016-08-02 11:44:00 +02:00
zmagod
18d73467c8 fixed hound warning 2016-08-02 11:16:07 +02:00
zmagod
166f907780 fixed search error 2016-08-02 11:10:30 +02:00
zmagod
f184ee3f2d fixing hound warnings 2016-08-02 09:13:30 +02:00
zmagod
9581e2751f fixes samples page for experiment level [fixes SCI-44] 2016-08-02 08:44:07 +02:00
zmagod
6e3ce92348 add checking for step content 2016-08-01 11:23:22 +02:00
Luka Murn
40fe4e54a9 Feed the Hound #2 2016-07-29 16:48:56 +02:00
Luka Murn
ecf5b5a2c1 Feed the Hound 2016-07-29 16:46:25 +02:00
Luka Murn
4d57479cf9 Remove comment 
Closes SCI-38.
 2016-07-29 16:40:42 +02:00
zmagod
95da62adde fixed hound 2016-07-29 16:38:42 +02:00
zmagod
25b99b6570 fixed search [fixes SCI-261] 2016-07-29 16:32:54 +02:00
Luka Murn
8a2b54819a More fixes on secondary navigation 2016-07-29 16:20:35 +02:00
Luka Murn
bed8687dbd Remove some unused commented code 2016-07-29 16:08:30 +02:00
Luka Murn
b085aa1db3 Remove uneccesary project_activities HTML pages 2016-07-29 16:06:35 +02:00
Luka Murn
ed2226c14b Refactor sidebar 2016-07-29 15:58:47 +02:00
Luka Murn
34af50a9d0 Fix breadcrumbs & sidebar so it works 2016-07-29 15:47:41 +02:00
Luka Murn
0f0689eddc Fix permission helper 2016-07-29 11:43:15 +02:00
Luka Murn
4ea86d6aa1 Code style fixes 2016-07-29 10:41:08 +02:00
Luka Murn
edafcaeed6 Move route module_archive_project -> module_archive_experiment 
Also add some new routes, move some templates.
 2016-07-29 10:25:02 +02:00
Luka Murn
ebda92ef05 Add experiments_controller 2016-07-29 10:21:21 +02:00
Luka Murn
1ad265835b Move route canvas_project -> canvas_experiment 2016-07-29 10:08:28 +02:00
Luka Murn
0c75423cc0 Add TODO to project overview page 2016-07-29 09:46:26 +02:00
Luka Murn
b64e200b91 Refactor canvas a lot. 
Also refactor localization files concerning canvas.
 2016-07-28 16:41:10 +02:00
Luka Murn
c8ef3b1899 Fix first time generator 2016-07-28 16:40:51 +02:00
zmagod
e95f518964 refactor canvas_controller, experiments_controller 2016-07-28 16:01:53 +02:00
zmagod
d91aa5c60b fixed translation sting 'name' to 'experiment' 2016-07-28 14:57:47 +02:00
zmagod
23a46d5fb3 added translations to experiment create and edit flash messages 2016-07-28 14:52:11 +02:00
zmagod
352944fc33 added new/edit experiment modals 2016-07-28 14:44:44 +02:00
Luka Murn
1953e295b6 Hotfix for search results bug 2016-07-28 13:29:26 +02:00
zmagod
9d23cfd940 fixed experiment routes 2016-07-28 11:30:34 +02:00
zmagod
c11932b45b fixed layout 2016-07-28 11:00:56 +02:00
zmagod
d16c0fe706 fixed edit canvas 2016-07-28 10:09:05 +02:00
zmagod
54c4051906 added canvas under experiments 2016-07-28 09:01:44 +02:00
zmagod
a17106b883 added experiments controller and fixed sidebar 2016-07-27 16:18:26 +02:00
Zmago Devetak
c869db2506 Merge pull request #35 from ZmagoD/zd_SCI_40 
Edit canvas controller to work with experiments
 2016-07-27 12:11:19 +02:00
zmagod
485d93f8b9 refactor canvas permissions 2016-07-27 11:35:07 +02:00
Jure Grabnar
1a1c4bb68a Remove needless join from MyModuleGroup 2016-07-27 10:18:57 +02:00
zmagod
5c7501a273 added experiments canvas labels in localization file and fixed canvas views 2016-07-26 14:21:59 +02:00
zmagod
0a84ecdfc1 edit canvas controller to work with experiment 2016-07-26 14:02:06 +02:00
Jure Grabnar
77ed1c5fd3 Change invalid references to project in search and shorten lines. 2016-07-26 12:59:37 +02:00
Jure Grabnar
80621c9b6b Add experiment text to all searches related to experiment 2016-07-26 12:26:48 +02:00
Jure Grabnar
690ad0fffa Add a few experiment permissions 2016-07-26 12:26:48 +02:00
Jure Grabnar
3be562bdf6 Add experiment to search results 2016-07-26 12:26:48 +02:00
Jure Grabnar
6d26203796 Add missing target var to result searches 2016-07-26 12:26:48 +02:00
Jure Grabnar
5283027da1 Add missing target var to searches. 2016-07-26 12:26:48 +02:00
Jure Grabnar
0361f006ca Add SearchableModel to Experiment and fix children 2016-07-26 12:26:48 +02:00
Jure Grabnar
49cd8a783d Update first time data generator with experiment. 2016-07-26 12:20:31 +02:00
Zmago Devetak
b13747291e Merge pull request #32 from ZmagoD/zd_SCI_31 
Fixing modules after integrating experiment-level
 2016-07-26 09:18:16 +02:00
zmagod
346bffe08f fixed protocol.rb 2016-07-26 09:17:24 +02:00
zmagod
c27ffa9fbf fixed project_my_module method 2016-07-26 08:44:09 +02:00
Luka Murn
3187843d14 Change updated_by -> last_modified_by 2016-07-25 14:47:13 +02:00
zmagod
6053c782f9 fixed permission_helper [fixes SCI-34] 2016-07-25 12:07:10 +02:00
zmagod
18d66ece56 migrated model related functions to experiment.rb [fixes: SCI-31] 2016-07-25 11:25:10 +02:00
zmagod
426bce48b2 fixed permission_helper 2016-07-25 09:31:40 +02:00
zmagod
b3c61cfa41 fixed project_my_modules method 2016-07-25 09:13:04 +02:00
zmagod
7c9a0bc2bb fixed models 2016-07-22 15:36:48 +02:00
zmagod
389ee7ea43 start fixing modules 2016-07-22 14:31:09 +02:00
Luka Murn
785fb2cba1 Initial migration & changes in ActiveRecords 2016-07-22 10:43:55 +02:00
Luka Murn
076b67620f Migration GitLab -> GitHub 2016-07-21 13:11:15 +02:00
Luka Murn
055298fee8 Initial commit. 2016-02-12 16:52:43 +01:00