Oleksii Kriuchykhin
34554e57e3
Fix filtering for repository snapshots [SCI-6423]
2022-01-17 21:53:13 +01:00
Martin Artnik
66081950f0
Fix added_on filter, add specs [SCI-6388]
2022-01-04 19:20:02 +01:00
aignatov-bio
a3dda322f6
Add report and protocol repository activities to recent work widget [SCI-6336] ( #3749 )
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Co-authored-by: Anton <anton@scinote.net>
2021-12-21 12:43:08 +01:00
Oleksii Kriuchykhin
738da6094f
Add advanced filters to repository datatable service [SCI-6210]
2021-12-21 12:38:52 +01:00
Alex Kriuchykhin
e72b58e6a3
Merge pull request #3704 from okriuchykhin/ok_SCI_6303
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Improve error handling in snapshot provisioning service [SCI-6303]
2021-12-15 10:18:52 +01:00
Oleksii Kriuchykhin
e67b17dd6f
Optimize loading of project and experiment cards [SCI-6346]
2021-12-13 16:43:16 +01:00
Oleksii Kriuchykhin
8f1b201061
Improve activities loading speed [SCI-6345]
2021-12-09 19:28:27 +01:00
artoscinote
c80cbe34f4
Remove invalid designated users when moving experiment [SCI-6335] ( #3722 )
2021-12-06 14:27:26 +01:00
Miha Mencin
cd0dc454f5
Fix the code style
2021-12-02 17:14:01 +01:00
Miha Mencin
9031f5b2c5
replace perform_later with perform_now, so we can catch a possible arror during the transaction
2021-12-02 17:04:28 +01:00
Miha Mencin
b964bfd31e
[SCI-6322] use correct user when creating templates, create assignment on experiments and tasks
2021-12-02 16:54:43 +01:00
aignatov-bio
850b164724
Update error handling for experiment move [SCI-6293] ( #3703 )
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Co-authored-by: Anton <anton@scinote.net>
2021-12-01 11:24:01 +01:00
Oleksii Kriuchykhin
db2c903e54
Improve error handling in snapshot provisioning service [SCI-6303]
2021-11-29 10:51:49 +01:00
Anton
774aa6cf9c
Fix experiment moving with archived tasks [SCI-6291]
2021-11-23 11:25:29 +01:00
Anton
a44dd8c915
Merge branch 'features/bmt-search' into features/repository-filters
2021-11-22 14:24:28 +01:00
aignatov-bio
06577e2f8b
Skip create assignments during team import [SCI-6280] ( #3679 )
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Co-authored-by: Anton <anton@scinote.net>
2021-11-22 11:17:39 +01:00
aignatov-bio
8545b5787f
Create assignment after experiment move [SCI-6285] ( #3689 )
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Co-authored-by: Anton <anton@scinote.net>
2021-11-22 10:34:11 +01:00
aignatov-bio
881251fe14
Skip null subjects for activities moving [SCI-6285] ( #3686 )
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Co-authored-by: Anton <anton@scinote.net>
2021-11-19 14:06:26 +01:00
Alex Kriuchykhin
ebfd2f7924
Merge pull request #3682 from okriuchykhin/ok_SCI_6088
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Add API endpoint for Cloning Experiments [SCI-6088]
2021-11-18 15:26:19 +01:00
aignatov-bio
57de414284
Fix user assignment for team import [SCI-6242] ( #3675 )
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Co-authored-by: Anton <anton@scinote.net>
2021-11-17 13:33:29 +01:00
Oleksii Kriuchykhin
2e92500a73
Fix seeds to work with new UserRoles, fix Templates creation job [SCI-6270]
2021-11-15 21:36:06 +01:00
artoscinote
a6c61c2b4e
Fixed permission issues when moving experiment [SCI-6257] ( #3655 )
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* Fixed permission issues when moving experiment [SCI-6257]
* Copy fixes [SCI-6248]
* Use canaid helper instead of permission_granted [SCI-6257]
* Fixes [SCI-6257]
2021-11-12 12:59:49 +01:00
Alex Kriuchykhin
1c3a2aa0a7
Fix permissions checks in recent work service [SCI-6253] ( #3654 )
2021-11-12 11:13:43 +01:00
Martin Artnik
9e7eee5f2c
Fixed to use .update! [SCI-6128]
2021-11-10 11:55:38 +01:00
Martin Artnik
68362bcb9c
Fix experiment move service [SCI-6128]
2021-11-10 11:46:48 +01:00
artoscinote
dcdd9ece13
Fixed docx report image generation [SCI-6203] ( #3639 )
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* Fixed docx report image generation [SCI-6203]
* Added error logging for docx image render error [SCI-6203]
2021-11-09 09:35:02 +01:00
Alex Kriuchykhin
f11a4701d0
Merge pull request #3629 from artoscinote/ma_SCI_6193
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Added optional webhook secret key [SCI-6193]
2021-11-08 21:00:40 +01:00
artoscinote
ba5403ab5e
Fixed activities service for singular relations (asset/result) [SCI-6204] ( #3633 )
2021-11-04 14:20:51 +01:00
artoscinote
33190e4582
Fixed typo in project overview service [SCI-6199] ( #3632 )
2021-11-04 14:20:42 +01:00
Martin Artnik
3406cd9235
Added optional webhook secret key [SCI-6193]
2021-11-03 15:04:13 +01:00
Oleksii Kriuchykhin
a99599efea
Merge branch 'features/new_permissions' into develop
2021-10-29 15:16:30 +02:00
artoscinote
1bb30b2c49
Also move activities when moving experiment to another project [SCI-6047] ( #3535 )
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* Also move activities when moving experiment to another project [SCI-6047]
* Changed update to update! [SCI-6047]
2021-10-28 16:35:47 +02:00
Alex Kriuchykhin
1bde37db78
Merge branch 'develop' into ok_SCI_5579
2021-10-28 13:26:27 +02:00
Oleksii Kriuchykhin
2fb71aa312
Add API endpoint for Cloning Experiments [SCI-6088]
2021-10-28 12:28:46 +02:00
aignatov-bio
9e3d64bbb6
Fix projects list in clone experiment dropdowns [SCI-6139] ( #3592 )
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Co-authored-by: Anton <anton@scinote.net>
2021-10-27 13:55:49 +02:00
aignatov-bio
22034089a6
Update experiment move service [SCI-6149] ( #3599 )
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* Update experiment move service [SCI-6149]
* Move permission check to helper [SCI-6149]
Co-authored-by: Anton <anton@scinote.net>
2021-10-27 13:48:52 +02:00
Alex Kriuchykhin
f6a30cac6c
Merge pull request #3593 from okriuchykhin/ok_SCI_6134
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Change Dashboard::RecentWorkService to use new user roles [SCI-6134]
2021-10-26 11:43:54 +02:00
aignatov-bio
aa4b765407
Update assign/unassign rows to task [SCI-6150] ( #3604 )
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Co-authored-by: Anton <anton@scinote.net>
2021-10-26 11:41:08 +02:00
aignatov-bio
edb09dd099
Update copy experiment permission checks [SCI-6147] ( #3598 )
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Co-authored-by: Anton <anton@scinote.net>
2021-10-26 11:40:54 +02:00
Alex Kriuchykhin
ac176f6c9e
Merge pull request #3596 from okriuchykhin/ok_SCI_6113
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Add user roles to team importer/exporter [SCI-6113]
2021-10-25 14:06:17 +02:00
Oleksii Kriuchykhin
b10a6c8b7d
Add user roles to team importer/exporter [SCI-6113]
2021-10-14 13:21:36 +02:00
artoscinote
c63090da8c
Fixed scopes and added permission checks to quick create services [SCI-6135] ( #3584 )
2021-10-14 13:13:29 +02:00
Oleksii Kriuchykhin
bc806f0c86
Change Dashboard::RecentWorkService to use new user roles [SCI-6134]
2021-10-13 14:12:24 +02:00
artoscinote
75d6a17cb7
Fix ProjectOverviewService and automatic project assignment [SCI_6117] ( #3572 )
2021-10-04 11:20:47 +02:00
aignatov-bio
3eb2c98cce
Update render permission for smart annotation [SCI-6112] ( #3571 )
2021-10-01 14:23:29 +02:00
artoscinote
63923f0e63
Skip inaccessible elements when generating reports [SCI-6109] ( #3569 )
2021-10-01 14:18:40 +02:00
artoscinote
f68d724202
Rework experiment permissions [SCI-6054] ( #3538 )
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* Rework experiment permissions [SCI-6054]
2021-09-30 11:32:11 +02:00
Martin Artnik
49b9ee37cc
Merge branch 'develop' into features/bmt-search
2021-09-24 11:01:27 +02:00
aignatov-bio
4472eb1023
Fix docx preview render [SCI-6035] ( #3559 )
2021-09-24 10:01:55 +02:00
Alex Kriuchykhin
0db9bf46ff
Merge pull request #3528 from okriuchykhin/ok_SCI_6036
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Prevent creation of duplicated repository cells [SCI-6036]
2021-09-17 16:37:48 +02:00
Oleksii Kriuchykhin
e8e1ee3011
Prevent creation of duplicated repository cells [SCI-6036]
2021-09-09 14:24:35 +02:00
Oleksii Kriuchykhin
7041cc19af
Fix BMT base URL path in requests [SCI-6010]
2021-09-07 16:28:14 +02:00
Oleksii Kriuchykhin
3cab5751e7
Add rake task for creation and syncing structure of BMT inventory [SCI-6010]
2021-09-07 12:17:09 +02:00
Martin Artnik
7e6ca3be8a
Merge branch 'develop' into features/new_permissions
2021-09-06 10:33:32 +02:00
Oleksii Kriuchykhin
b32477a933
Add error message in report in case of file preview generation failure [SCI-5848]
2021-08-30 14:18:31 +02:00
Martin Artnik
896f0ce1e3
Implemented applying BMT filters [SCI-5980]
2021-08-30 10:49:15 +02:00
Oleksii Kriuchykhin
d4ef2b1bd4
Add BMT inventory model [SCI-6009]
2021-08-30 10:49:15 +02:00
Oleksii Kriuchykhin
0b74f34de7
Add external IDs to repositories [SCI-5990]
2021-08-30 10:49:14 +02:00
Martin Artnik
1b26a4f65a
Added access token to protocols.io requests [SCI-5968]
2021-08-26 15:26:35 +02:00
Martin Artnik
56576960b0
Rework molecule registration activities [SCI-5999]
2021-08-13 15:15:45 +02:00
Martin Artnik
861be4bb35
Fix issues with BioEddie integration [SCI-5982]
2021-08-11 09:50:00 +02:00
Martin Artnik
8f3f39f7c7
Fixed handling of activity subject parents when matching activity filters [SCI-5973]
2021-08-06 13:43:30 +02:00
Martin Artnik
57d5e6c2a7
Merge branch 'develop' into features/barcodes
2021-08-03 13:36:36 +02:00
artoscinote
f839cb5256
Merge pull request #3464 from biosistemika/features/bioeddie-integration
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Features/bioeddie integration
2021-08-03 13:32:53 +02:00
artoscinote
c41247a5fd
Merge pull request #3439 from artoscinote/ma_SCI_5879
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Implement Save & Register molecule [SCI-5879]
2021-08-03 12:15:46 +02:00
Martin Artnik
a82af505eb
Merge branch 'develop' into features/webhooks
2021-08-02 16:22:52 +02:00
Martin Artnik
0f417f9730
Merge branch 'develop' into features/barcodes
2021-07-29 13:32:17 +02:00
Martin Artnik
67f4e81a3a
Merge branch 'develop' into features/new_permissions
2021-07-28 15:16:47 +02:00
Martin Artnik
e57132dbd0
Added print job queue system, job status endpoint [SCI-5903]
2021-07-27 15:26:18 +02:00
Martin Artnik
53e072f79e
Added error handling to API wrapper [SCI-5939]
2021-07-27 10:36:06 +02:00
Martin Artnik
61919e81b6
Remove FLUICS API client hack [SCI-5939]
2021-07-27 09:41:51 +02:00
Martin Artnik
b32b207f3d
Added FLUICS API client [SCI-5939]
2021-07-23 13:52:28 +02:00
Oleksii Kriuchykhin
c26dcf4b23
Replace empty? with blank? [SCI-5579]
2021-07-23 11:56:28 +02:00
Martin Artnik
662370d2bd
Removed auto-disable, fixed ActiveJob + DelayedJob retry handling [SCI-5800]
2021-07-22 13:43:36 +02:00
Martin Artnik
4bb080c25b
Merge migrations, code fixes [SCI-5800]
2021-07-22 10:51:03 +02:00
Martin Artnik
04b94d504d
Moved activity logging to controller [SCI-5879]
2021-07-22 09:52:04 +02:00
Alex Kriuchykhin
dfa2a7775d
Merge pull request #3422 from okriuchykhin/ok_SCI_5847
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Fix repository cell joining and preloading [SCI-5847]
2021-07-21 13:18:21 +02:00
Alex Kriuchykhin
dbc54278b2
Merge pull request #3211 from okriuchykhin/ok_SCI_5531
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Add basic API client for BMT [SCI-5531]
2021-07-21 13:13:52 +02:00
Oleksii Kriuchykhin
36708b47cf
Fix code styling [SCI-5531]
2021-07-21 13:10:30 +02:00
artoscinote
888131a465
Merge branch 'features/bioeddie-integration' into ma_SCI_5879
2021-07-20 09:48:13 +02:00
aignatov-bio
53456988ba
Add bioEddie activities and user licenses [SCI-5845][SCI-5842] ( #3411 )
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* Add bio eddie licens to users [SCI-5845]
* Add activities for BioEddie [SCI-5842]
2021-07-19 21:33:28 +02:00
artoscinote
5f9c04844f
Added prefixed IDs to repository rows (items) [SCI-5909] ( #3441 )
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* Added prefixed IDs to repository rows (items) [SCI-5909]
* Fix prefixed id queries to work with joins, use subquery in repository search [SCI-5909]
* Fixed accessing repository_row parent code [SCI-5909]
* Better handling of repository_row code display [SCI-5909]
* Fix index warning for id prefixed models issue setting up project [SCI-5909]
2021-07-19 14:23:36 +02:00
Martin Artnik
96a5b97bdb
Implement Save & Register molecule [SCI-5879]
2021-07-15 12:37:04 +02:00
Oleksii Kriuchykhin
549fc8e5a0
Fix repository cell joining and preloading [SCI-5847]
2021-07-07 17:43:51 +02:00
Oleksii Kriuchykhin
d1208bad0b
Merge branch 'develop' into features/new_permissions
2021-07-07 13:44:36 +02:00
Martin Artnik
3662365cac
Small code style tweak SCI-5800
2021-06-30 13:15:08 +02:00
Martin Artnik
618f5cfb53
Code style fixes [SCI-5800]
2021-06-30 13:08:16 +02:00
artoscinote
723b594632
Merge pull request #3398 from artoscinote/ma_SCI_5828
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Expose experiment IDs in interface and reports [SCI-5828]
2021-06-30 12:58:25 +02:00
Martin Artnik
b623e2f40f
Report generation fixes [SCI-5851]
2021-06-29 13:46:45 +02:00
aignatov-bio
786e74e4de
Add BioEddie integration [SCI-5654][SCI-5657][SCI-5658][SCI-5670] ( #3391 )
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* Add backend for bioeddie [SCI-5654]
* Add modal for bioeddie [SCI-5654]
* Add bio eddie editor to steps and results [SCI-5654]
* Fix markup and code styling
2021-06-23 19:48:44 +02:00
Martin Artnik
d67d53b926
Code style fixes
2021-06-22 13:27:03 +02:00
Martin Artnik
66d2e65114
Fixed report docx generation [SCI-5837]
2021-06-21 12:52:12 +02:00
Martin Artnik
879cf5081d
Added experiment code to experiment cards filter [SCI-5829]
2021-06-18 14:38:07 +02:00
Martin Artnik
afc1b2d8b6
Added experiment code to PDF and DOCX [SCI-5830]
2021-06-18 14:14:02 +02:00
Oleksii Kriuchykhin
bb458abec6
Remove old reports code [SCI-5650]
2021-06-18 10:40:00 +02:00
Martin Artnik
c6648111f3
Code style fixes [SCI-5800]
2021-06-17 22:00:13 +02:00
Oleksii Kriuchykhin
1e3197875c
Fix repositories selection in report wizard and deleted repositories handling [SCI-5831]
2021-06-17 16:23:27 +02:00
Martin Artnik
47071e23a1
Added specs for webhooks
2021-06-17 14:54:30 +02:00
Alex Kriuchykhin
4caa5f9ac1
Merge pull request #3394 from okriuchykhin/ok_SCI_5776_v2
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Fix repository snapshots for export all [SCI-5776]
2021-06-17 11:35:16 +02:00
Martin Artnik
4ee50f87d5
Implement webhook service and scheduling jobs [SCI-5801, SCI-5802]
2021-06-17 09:19:04 +02:00