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655 commits 69 branches 179 tags 165 MiB
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527 commits

Author SHA1 Message Date
zmagod 3d5a42cc27 refactor results controller 2016-09-13 13:26:04 +02:00
zmagod 222ddf7438 fixed houd error 2016-09-13 13:26:04 +02:00
zmagod 691ae94d2c enabled to delete results in task archive [fixes SCI-370] 2016-09-13 13:26:04 +02:00
zmagod 65383f1824 fixes sidebar expanded elements when adding new experiments [fixes SCI-342] 2016-09-13 13:09:57 +02:00
Pavel Maslov 15ea8fc0dc Bug fixed: comments in results have no error message if the text exceeds 1000 characters. 2016-09-13 12:01:56 +02:00
Zmago Devetak d37c7b853b Merge pull request #140 from ZmagoD/zd_SCI_341 
adds label to current project in clone experiment modal [fixes SCI-341]
 2016-09-13 11:59:01 +02:00
Zmago Devetak f86c6b954e Merge pull request #141 from ZmagoD/zd_SCI_340 
styled dottel line in sidebar [fixes SCI-340]
 2016-09-13 11:58:26 +02:00
Jure Grabnar 6519e8dbb1 Add e-notation preprocessing to formulas 
SCI-350 #close
 2016-09-13 09:46:22 +02:00
Jure Grabnar fa3515d2eb Add formulas to reports 2016-09-13 09:46:21 +02:00
Jure Grabnar 3b364be70b Add formulas to steps tables 2016-09-13 09:44:17 +02:00
Jure Grabnar 5c88bdeeae Add formulas for readonly results tables 2016-09-13 09:44:17 +02:00
Jure Grabnar e096f936f9 Add formulas to results 2016-09-13 09:44:17 +02:00
Matej Zrimšek af8ab3e081 Fixed step's checklist items editing (items not multiplying and new item insertion always at bottom) [fixes SCI-427]. Improved step/result comment GUI [SCI-446]. 2016-09-12 16:55:46 +02:00
zmagod 1b31f8827d set experiment description to 255 2016-09-08 14:35:52 +02:00
Zmago Devetak 1368716aa0 Merge pull request #130 from ZmagoD/zd_SCI_348 
project overview - updating (or creating new) experiment details
 2016-09-08 12:49:35 +02:00
mlorb f4029a04fd Merge pull request #142 from mlorb/ml_sci_415 
fixes navbar size when resizing window [SCI-415]
 2016-09-08 12:46:36 +02:00
Matej Zrimšek 6eca3661bf Some JS error refactoring and accordingly updated error rendering when experiment description is too long. 2016-09-08 12:43:31 +02:00
Mojca Lorber 0435011fee fixes hound 2016-09-08 12:43:30 +02:00
Mojca Lorber 302a777615 fixes button collision 2016-09-08 12:37:06 +02:00
zmagod faed0500c7 set move and clone permissions to also validate the user on the organizational level [fixes SCI-372] 2016-09-08 09:23:29 +02:00
Mojca Lorber 4c66ca6f80 fixes navbar size when resizing window 2016-09-08 09:17:58 +02:00
Matej Zrimšek 40355dcc97 If file is recognized as office file, it's allowed to be any office file type. 2016-09-07 14:04:11 +02:00
Luka Murn 0c1759c15a Merge pull request #135 from Ducz0r/lm-sci-397 
Resize archived experiment panels
 2016-09-07 11:14:53 +02:00
mz3944 d3a3dd4428 Merge pull request #138 from mz3944/mz_result_edit_and_name_length_check_fix 
Fixed result file deletion and result name updating [fixes SCI-409]. …
 2016-09-07 11:07:23 +02:00
mz3944 5f446ab1f0 Merge pull request #134 from mz3944/mz_delete_step_file_fix 
Fixes files deletion when rails worker is running [fixes SCI-411] and…
 2016-09-07 11:00:50 +02:00
zmagod d92597ac30 styled dottel line in sidebar [fixes SCI-340] 2016-09-07 09:01:40 +02:00
zmagod d482dff2e6 adds label to current project in clone experiment modal [fixes SCI-341] 2016-09-07 08:26:36 +02:00
zmagod 487d3e18f4 fixed moved experiment thumbnail [fixes SCI-410] 2016-09-07 07:55:45 +02:00
Matej Zrimšek b0ad6d0753 Fixed result file deletion and result name updating [fixes SCI-409]. Fixed step name and checklists names and its items names checking, and items removing [fixes SCI-407]. 2016-09-06 23:26:00 +02:00
zmagod daa144ce7c added missing bracket 2016-09-06 11:57:03 +02:00
zmagod 856d226946 fixed move experiment form error duplication 2016-09-06 11:48:56 +02:00
zmagod a5a24c7610 clear unused variable 2016-09-06 11:46:28 +02:00
zmagod b672d85405 fixed error message duplication 2016-09-06 11:46:28 +02:00
zmagod b44a284b54 sets edit experiment validation 2016-09-06 11:46:28 +02:00
zmagod 9d469f9092 sets front end validation for new experiment modal [fixes SCI-348] 2016-09-06 11:44:03 +02:00
zmagod de6c03a73b setup experiment modal input validation 2016-09-06 11:44:03 +02:00
Zmago Devetak 9440371f3f Merge pull request #131 from ZmagoD/zd_SCI_400 
Sets front end validation for experiment move action [fixes SCI-400]
 2016-09-06 11:39:38 +02:00
zmagod c526cab498 removed commented code 2016-09-06 11:38:02 +02:00
mlorb f0e28b90a0 Merge pull request #133 from mlorb/ml_sci_415 
minimize buttons on mobile phone [SCI-415]
 2016-09-06 11:26:32 +02:00
Luka Murn bda5120548 Resize archived experiment panels 
Closes SCI-397.
 2016-09-06 10:55:05 +02:00
Matej Zrimšek 9fb30c7661 Fixes files deletion when rails worker is running [fixes SCI-411] and fixes picture's style files deletion. 2016-09-06 10:40:01 +02:00
Mojca Lorber 47983812e7 minimize buttons on mobile phone 2016-09-06 10:10:49 +02:00
Zmago Devetak 1a19753df9 Merge pull request #128 from ZmagoD/zd_SCI_105 
Trim long words in reports [fixes SCI-105]
 2016-09-06 10:10:06 +02:00
zmagod a7b6135b2f cleared console.log 2016-09-06 10:08:32 +02:00
Luka Murn 81883911c4 Merge pull request #132 from Ducz0r/lm-sci-228 
Updates to invite users to team modal window
 2016-09-05 15:53:15 +02:00
mlorb aea288371f Merge pull request #129 from mlorb/ml_sci_310 
adds tasks, experiment and project category in protocol search results [SCI-310]
 2016-09-05 15:31:35 +02:00
Luka Murn 1d8600b39f Fix bug when inviting existing users onto teams 
Closes SCI-228
 2016-09-05 14:52:56 +02:00
mz3944 50e0c26e89 Merge pull request #125 from mz3944/mz_removed_avatar_upload_popop_sci_399 
Popup for preventing page leaving when uploading avatar fixed [fixes SCI-399]
 2016-09-05 11:49:04 +02:00
Mojca Lorber 6a802e9fa7 fixes redirection to project page for all categories in search results 2016-09-05 11:40:49 +02:00
Mojca Lorber 740392c687 optimization 2016-09-05 10:58:37 +02:00
zmagod 667fb67052 sets front end validation for experiment move action [fixes SCI-400] 2016-09-02 16:31:17 +02:00
Zmago Devetak fb6bc31bec Merge pull request #127 from ZmagoD/zd_SCI_247_again 
Table from step stays in report, although it is deleted from step.
 2016-09-02 15:59:17 +02:00
Zmago Devetak ea26a532e4 Merge pull request #126 from ZmagoD/zd_SCI_332 
By default all experiments should be collapsed
 2016-09-02 15:58:03 +02:00
Mojca Lorber 6763d8e7a1 fixes hound again 2016-09-02 11:56:32 +02:00
Mojca Lorber 4bce00ac61 fixes hound 2016-09-02 11:54:20 +02:00
Mojca Lorber 83034f705d adds tasks, experiment and project category in protocol search results 2016-09-02 11:45:54 +02:00
zmagod 28fa00c30c trim long words in reports [fixes SCI-105] 2016-09-01 15:45:39 +02:00
zmagod 4afaa50ce0 fixed multiple tables check 2016-09-01 13:49:12 +02:00
zmagod 111cb81d08 clear tables from report [fixes SCI-247] again 2016-09-01 13:38:09 +02:00
Luka Murn 61f4fbd1d4 Remove warning info when removing pending user from organization 2016-09-01 13:23:53 +02:00
zmagod ac7ac95da8 [fixes SCI-332] 2016-09-01 10:38:20 +02:00
Matej Zrimšek 4fdf478426 Minor refactoring. 2016-08-31 17:57:06 +02:00
Matej Zrimšek 828eebeb16 Popup for preventing page leaving when uploading avatar fixed [fixes SCI-399] 2016-08-31 17:21:17 +02:00
zmagod 55ba2de41f fixes object duplication 2016-08-31 16:34:08 +02:00
zmagod fabfa83171 introdutory popup cookie 2016-08-31 15:18:21 +02:00
zmagod e8f971829a added project to session storage 2016-08-31 15:13:17 +02:00
Luka Murn 5cb79f6282 Fix the default parameters in JS 
This was causing major issues in IE.
 2016-08-31 14:04:45 +02:00
zmagod eb394ce209 fixes searching tables bug [fixes SCI-402] 2016-08-31 11:01:10 +02:00
zmagod b05c3df4d3 adds toggle id only to elements with modules 2016-08-31 10:25:40 +02:00
zmagod eb39eedfdf [fixes SCI-398] again 2016-08-31 08:46:51 +02:00
zmagod 21f84bacb6 set sidebar collapsed elements 2016-08-31 08:24:59 +02:00
jbargu 2cd5d85d68 Merge pull request #120 from jbargu/jg_SCI_328_move_experiment_reconnect 
When moving a task, it should connect the source and destination
 2016-08-30 18:01:38 +02:00
mlorb 905acfd43d Merge pull request #109 from mlorb/ml_sci_286 
fixes notification when adding new sample [SCI-286]
 2016-08-30 17:54:45 +02:00
Mojca Lorber dd8e5d5e12 fixes hound 2016-08-30 17:12:26 +02:00
Mojca Lorber 1b1e6daa21 fixes notification disappearance and error notifications 2016-08-30 16:55:59 +02:00
Jure Grabnar 9a82e7d72b Connect tasks on moving 
SCI-328 #close
 2016-08-30 15:57:27 +02:00
mlorb 8fc29248b3 Merge pull request #119 from mlorb/ml_sci_396 
fixes missing experiment name in side bar [SCI-396]
 2016-08-30 15:05:04 +02:00
Zmago Devetak 11b314fa20 Merge pull request #107 from ZmagoD/zd_bug_fix 
fixes new task button after tutorial ends
 2016-08-30 15:04:11 +02:00
Zmago Devetak 375a72db18 Merge pull request #114 from ZmagoD/zd_SCI_294_vol2 
fixes reports file name [fixes SCI-294]
 2016-08-30 14:59:07 +02:00
Zmago Devetak 5b4eb07960 Merge pull request #118 from ZmagoD/zd_SCI_398 
fixes workflow img bug [fixes SCI-398]
 2016-08-30 14:55:33 +02:00
Mojca Lorber 52f228725a fixes hound 2016-08-30 14:04:47 +02:00
Mojca Lorber aeda6f77d2 fixes missing experiment name in side bar 2016-08-30 13:51:16 +02:00
zmagod a947354fb5 fixes update times [fixes SCI-398] 2016-08-30 13:23:48 +02:00
Luka Murn c6e575bd2a Merge pull request #115 from Ducz0r/lm-deleting-comments-fix 
Fix for deleting comments
 2016-08-30 13:15:35 +02:00
Luka Murn 2b382fee0f Merge pull request #113 from Ducz0r/lm-add-first-time-activities 
Fix first time data generator & fake data generator
 2016-08-30 13:07:52 +02:00
Luka Murn 0e0228cb8c Codestyle fixes 2016-08-30 13:06:49 +02:00
zmagod 95ab35e3d6 cleanup update timestamp 2016-08-30 12:58:52 +02:00
Mojca Lorber 43c3a0bb81 fixes merge again 2016-08-30 12:54:08 +02:00
Mojca Lorber 81f9e59dcd fixes merge 2016-08-30 12:14:15 +02:00
Mojca Lorber e8d187b5f6 Merge branch 'ml_sci_395' 
Conflicts:
	app/views/canvas/edit/modal/_move_module.html.erb
	app/views/canvas/edit/modal/_move_module_group.html.erb
 2016-08-30 11:41:25 +02:00
Luka Murn 77ec5bcff9 Reposition comment dropdowns horizontally if needed 
Closes SCI-258
 2016-08-30 11:39:50 +02:00
zmagod f356acb882 fixes reports file name [fixes SCI-294] 2016-08-30 11:36:39 +02:00
Zmago Devetak 6878adda46 Merge pull request #112 from ZmagoD/zd_SCI_338_vol2 
Tutorial
 2016-08-30 11:07:51 +02:00
Luka Murn 4ee4c6caba Remove JS validator from step comments 2016-08-30 11:06:30 +02:00
jbargu fa357dd54f Merge pull request #110 from jbargu/jg_SCI_328_move_task_no_experiment 
Remove move on empty experiments
 2016-08-30 11:06:16 +02:00
zmagod 4b6567e488 fixed workflowimg link 2016-08-30 11:03:33 +02:00
zmagod 6f1c4df942 fixed new task button in canvas 2016-08-30 10:48:28 +02:00
Zmago Devetak e96429409e Merge pull request #108 from ZmagoD/zd_SCI_247_vol2 
Fixes step destroing bug and fixes reports [fixes SCI-247]
 2016-08-30 09:57:56 +02:00
zmagod 57c1707e81 fixes secondary navigation [fixes SCI-338] 2016-08-30 09:53:56 +02:00
Luka Murn c86d21d689 Fix bug in organization.rb 
Bug was related to introduction of experiment level.
 2016-08-30 09:46:54 +02:00
Mojca Lorber a35bf7182f fixes troubles 2016-08-30 09:43:39 +02:00
Mojca Lorber 596d403d5f change position of buttons 2016-08-30 09:16:53 +02:00
zmagod d33bb50519 disabled secondary navigation in samples tutorial 2016-08-30 08:57:05 +02:00
zmagod 5518d1cd1e fixed 16 step of tutorial 2016-08-30 08:52:44 +02:00
Jure Grabnar 0c184dcdcf Remove Move button on empty experiments 
SCI-328 #close.
 2016-08-30 08:26:59 +02:00
Luka Murn 30e8e33774 Add comment activities to first time data generator 2016-08-30 08:19:35 +02:00
Mojca Lorber b07f1af90f fixes hound again again 2016-08-29 17:08:00 +02:00
Mojca Lorber 7f8bb9be53 fixes hound again 2016-08-29 13:59:51 +02:00
Mojca Lorber 60b0d69a72 fixes hound 2016-08-29 13:56:05 +02:00
Mojca Lorber 53cdbc2638 fixes notification when adding new sample 2016-08-29 13:45:54 +02:00
zmagod 17aacc8ff5 fixes step destroing bug and fixes reports [fixes SCI-247] 2016-08-29 12:04:46 +02:00
zmagod 5af9d10c6a fixes new task button after tutorial ends 2016-08-29 11:46:45 +02:00
zmagod 2ac20d1af1 adds new image + new panel title [fixes SCI-336] 2016-08-29 09:28:29 +02:00
Luka Murn a0311970f8 Add missing commits for showing image and not able to preview 2016-08-26 16:49:32 +02:00
zmagod d886d05ccb Merge branch 'zd_SCI_338' 2016-08-26 16:32:49 +02:00
Matej Zrimšek e3a7f45fdf Merge branch 'master' into mz_file_upload_and_client_side_upgrade 
Conflicts:
	app/assets/javascripts/application.js
	app/views/results/_result_asset.html.erb
	app/views/steps/_step.html.erb
 2016-08-26 11:13:40 +02:00
Zmago Devetak 0cfc758f43 Merge pull request #102 from ZmagoD/zd_SCI_336 
implement first time popup logic
 2016-08-26 09:19:36 +02:00
zmagod b0bd92e3f4 fixed edit action 2016-08-26 09:17:55 +02:00
zmagod 2031c42920 fixed confirmation text 2016-08-26 09:13:45 +02:00
Matej Zrimšek 782d384e26 Spinner now doesn't hide prematurally on file uploading. Some recently introduced bugs quickfixes (report images not showing, locale missplealing, client-side blank tables deletion deleted all tables, error if no asset present in a step). 2016-08-25 22:26:53 +02:00
Matej Zrimšek 04d9163ff6 Paperclip file spoofing corrected/modified. 2016-08-25 18:57:06 +02:00
zmagod 99976722a8 uncomment js file 2016-08-25 18:49:49 +02:00
zmagod 1738ca66d2 one-time introductory popup [fixes SCI-336] 2016-08-25 18:44:21 +02:00
Luka Murn 8018cff02e Merge pull request #103 from Ducz0r/bb_edit_delete_comments 
Edit&delete comments
 2016-08-25 17:18:48 +02:00
mlorb b1218cb3d6 Merge pull request #59 from biosistemika/ml_sci_244 
fixes tutorial bug of inappropriate window [SCI-244]
 2016-08-25 17:16:45 +02:00
Luka Murn b533b0aca6 Fix another minor bug 2016-08-25 17:15:53 +02:00
Luka Murn 7cd94e8b0d Fix a minor bug on canvas 2016-08-25 17:09:55 +02:00
Luka Murn 9cd99fc532 Display "no comments" if you delete the last comment 2016-08-25 17:01:30 +02:00
Zmago Devetak 1b21e55fea Merge pull request #100 from ZmagoD/zd_SCI_381 
Adds experiment and team to tag search resuls [fixes SCI-381]
 2016-08-25 15:43:50 +02:00
zmagod 7a47ff6bc5 fixed new task error 2016-08-25 15:30:32 +02:00
zmagod 8ff645fb89 disabled experiment dropdown actions 2016-08-25 15:16:51 +02:00
Zmago Devetak b090fd8d5b Merge pull request #95 from ZmagoD/zd_SCI_374 
adds edit workflow link if no workflow [fixes SCI-374]
 2016-08-25 14:07:33 +02:00
Luka Murn a480c8d403 Styling fixes 2016-08-25 13:59:50 +02:00
Luka Murn 6d86a02d7c Add individual permission checks in dropdowns 
Closes SCI-258.
 2016-08-25 13:51:50 +02:00
Luka Murn 8592c13ed4 Remove now obsolote controller actions 2016-08-25 13:51:31 +02:00
Luka Murn b0d7b9dc75 Generate activities when editing/deleting comments 2016-08-25 13:51:31 +02:00
Luka Murn 24dd25d9f5 Add edit/delete result comment functionality 
Lessons learned during this fix:
Don't use dependant: :destroy on both ends of association
between 2 ActiveRecords, or you will run into stack overflow.
 2016-08-25 13:51:31 +02:00
Luka Murn bac0455435 Add edit&delete functionality to step comments 
This commit also:
* fixes a bug in permission_helper.rb,
* fixes comments.js a bit,
* adds 2 more re-renders of dropdown position calculations to canvas.js and projects/index.js.
 2016-08-25 13:51:31 +02:00
Luka Murn 512efd3812 Fix 2 lines that were too long 2016-08-25 13:51:31 +02:00
Luka Murn c92d016f65 Add edit&delete module/task comments functionality 
This required a minor fix of comments.js.
 2016-08-25 13:51:31 +02:00
Luka Murn f0d9cb96fa Add edit project comments functionality 2016-08-25 13:51:30 +02:00
Luka Murn 15c0baeee8 Add delete project comment functionality 
This commit also removes the old code from @bberic.
 2016-08-25 13:51:30 +02:00
Luka Murn 9e3bb8edb7 Add dependant: :destroy to comments 2016-08-25 13:51:30 +02:00
Luka Murn 8a73a3ab5c Update permission_helper.rb and routes.rb 2016-08-25 13:51:30 +02:00
Luka Murn 319bcc7850 Add permissions for comments to permission_helper.rb 2016-08-25 13:51:30 +02:00
Luka Murn 5569a1e6d2 Revert 2 files that contained no changes 2016-08-25 13:51:30 +02:00
scibb a76d82d188 delete and edit comments for projects, protocols, results, and workflow elements 2016-08-25 13:51:30 +02:00
zmagod 5fabe06b8d implement first time popup logic 2016-08-25 11:44:49 +02:00
Mojca Lorber 4a5d720724 change position of overview and samples 2016-08-25 11:19:53 +02:00
zmagod 1120ef1407 adds experiment and team to tag search resuls [fixes SCI-381] 2016-08-25 10:40:03 +02:00