scinote-eln/scinote-web
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282 commits

Author SHA1 Message Date
zmagod dccf4e34ff fix cucumber settings 2017-10-12 13:50:48 +02:00
mlorb c358f8fa0c write unit tests for invite users 2017-09-28 14:49:33 +02:00
Oleksii Kriuchykhin faaa016267 Update AWS SDK v2 [SCI-1623] 2017-09-26 13:41:53 +02:00
mlorb 48c8922604 adds invite users modal 2017-09-21 10:45:35 +02:00
Luka Murn e078ae4f77 Merge branch 'rails-5.1' into decoupling-settings-page 2017-09-21 08:36:09 +02:00
Luka Murn beae1b05d8 Merge branch 'master' into rails-5.1 
Conflicts:
	Gemfile
	Gemfile.lock
 2017-09-21 08:27:38 +02:00
Luka Murn 8463c89386 Update Gemfile 2017-09-01 09:36:40 +02:00
Oleksii Kriuchykhin c3fceb90df Backport API to Rails-4 [SCI-1579] 2017-08-30 13:30:41 +02:00
zmagod ee054f91b8 adds bullet gem [fixes SCI-1578] 2017-08-30 09:29:45 +02:00
Luka Murn b6eb46471a Merge pull request #753 from Ducz0r/lm-remove-some-code 
Remove some code we're no longer maintaining
 2017-08-22 14:04:04 +02:00
Luka Murn 90188c89c9 Update delayed_paperclip library 
Closes SCI-1376.
 2017-08-22 08:34:58 +02:00
zmagod c5e32c4ea0 Merge branch 'rails-5.1' of https://github.com/biosistemika/scinote-web into merge-rails-5.1-branch 2017-08-21 09:52:14 +02:00
Luka Murn 13eae287bb Revert "Add core API using JWT authentication and tests for it [SCI-1507]" 2017-08-07 11:54:45 +02:00
Luka Murn ae5bccf709 Merge branch 'master' into rails-5.1 
Conflicts:
	Gemfile.lock
	app/datatables/repository_datatable.rb
	app/models/repository_cell.rb
 2017-08-07 08:45:53 +02:00
Oleksii Kriuchykhin e958410261 Add core API using JWT authentication and tests for it [SCI-1507] 2017-08-03 17:00:14 +02:00
zmagod 6ef19725f1 adds redux 2017-08-02 17:27:05 +02:00
Luka Murn 03a7440136 Remove SkyLight stuff (we're not using it any more) 2017-07-27 14:26:44 +02:00
zmagod 416ab8eee3 Merge branch 'rails-5.1' of https://github.com/biosistemika/scinote-web into zd_SCI_1400 2017-07-26 16:20:09 +02:00
Oleksii Kriuchykhin 6c33b46f6a Improve import of repository records plus tsv file import fixes [SCI-1487] 2017-07-20 11:44:10 +02:00
Oleksii Kriuchykhin ece27b2652 Fix importing files with empty header cells and error messages improvements [SCI-1484] 2017-07-18 14:54:35 +02:00
Oleksii Kriuchykhin b8e93ee883 Add Webpacker and React [SCI-1461] 2017-07-12 16:41:55 +02:00
zmagod 6636190442 removes unneeded gems, adds validation test to models 2017-07-06 17:37:29 +02:00
zmagod 234ca71f0a removes unneded gems, fixes hound 2017-07-06 09:45:59 +02:00
zmagod 750c82a80f setup testing tools [fixes SCI-1400] 2017-07-06 09:07:05 +02:00
zmagod bc33883c3c first run fixing addons 2017-06-30 10:23:28 +02:00
zmagod 71aa05bb0e refactor 2017-06-27 14:58:49 +02:00
zmagod 819f47b450 setup sciNote for Rails 5.1 2017-06-23 15:19:08 +02:00
zmagod 1b21f073d7 Rails 5.1.1 2017-06-23 10:34:46 +02:00
zmagod 909a114418 Rails 5.0.0.rc2 2017-06-23 10:08:54 +02:00
zmagod 75507107fd migrate to 4.2.9 2017-06-23 08:50:12 +02:00
Paul Menzel 24b97637b4 Gemfile: Use HTTPS protocol for sneaky-save 
Address the Bundler warning below.

```
Step 6/14 : RUN bundle install
 ---> Running in bfbfa83e61de
The git source `git://github.com/einzige/sneaky-save.git` uses the `git` protocol, which transmits data without encryption. Disable this warning with `bundle config git.allow_insecure true`, or switch to the `https` protocol to keep your data secure.
Your Ruby version is 2.3.4, but your Gemfile specified 2.3.3
The command '/bin/sh -c bundle install' returned a non-zero code: 18
```
 2017-06-07 11:47:16 +02:00
zmagod 10db322307 fixes input sanitize method [fixes SCI-1248] 2017-05-10 14:57:11 +02:00
zmagod 5b58824ec0 refactor 2017-05-03 15:30:08 +02:00
zmagod 550f563666 working version for steps first run 2017-04-21 16:09:04 +02:00
zmagod c25df63a14 add tinymce img importer and refactor input sanitize helper 2017-04-19 09:11:52 +02:00
Zmago Devetak 9c31239318 Merge pull request #552 from biosistemika/release-1.9.0 
Release 1.9.1
 2017-04-12 13:08:37 +02:00
Luka Murn e656101c47 Revert Wicked PDF Gem version 2017-04-12 09:27:31 +02:00
Luka Murn a30c7a77e8 Silence Wicked PDF generation 
Closes SCI-1107.
 2017-04-10 14:00:31 +02:00
zmagod 9a17648eee Adds new relic in sciNote [fixes SCI-1183] 2017-04-07 11:23:45 +02:00
Oleksii Kriuchykhin a7be37ef67 Add docker files for running in production mode [SCI-1096] 2017-03-27 14:36:20 +02:00
Luka Murn ee65e46fc7 Remove 'nokogiri' Gem being included twice 2017-03-22 10:37:11 +01:00
zmagod 0c2523beca Merge branch 'master' of https://github.com/biosistemika/scinote-web into office_integration 2017-03-10 16:21:43 +01:00
Luka Murn 53699193a2 Merge branch 'smart-annotations' 
Conflicts:
	app/assets/javascripts/comments.js.erb
	app/assets/javascripts/protocols/index.js
	app/assets/javascripts/protocols/steps.js.erb
	app/assets/javascripts/samples/sample_datatable.js.erb
	app/controllers/my_module_comments_controller.rb
	app/controllers/project_comments_controller.rb
	app/controllers/result_comments_controller.rb
	app/controllers/step_comments_controller.rb
	app/datatables/sample_datatable.rb
	app/views/my_module_comments/_comment.html.erb
	app/views/project_comments/_comment.html.erb
	app/views/projects/show/_experiment.html.erb
	app/views/reports/elements/_experiment_element.html.erb
	app/views/reports/elements/_result_comments_element.html.erb
	app/views/reports/elements/_result_text_element.html.erb
	app/views/reports/elements/_step_checklist_element.html.erb
	app/views/reports/elements/_step_comments_element.html.erb
	app/views/reports/elements/_step_element.html.erb
	app/views/result_comments/_comment.html.erb
	app/views/results/_result_text.html.erb
	app/views/step_comments/_comment.html.erb
	app/views/steps/_step.html.erb
	db/schema.rb
 2017-01-24 14:33:23 +01:00
Oleksii Kriuchykhin 1abd7fc574 Added xml schemas and zip gem [SCI-742] 2017-01-23 17:34:02 +01:00
zmagod 65fa631b1c adding tinyMce first run 2017-01-18 22:40:08 +01:00
Luka Murn cf72da5635 Merge branch 'improved-files-handling' into 'master' 
Conflicts:
	app/assets/javascripts/protocols/steps.js.erb
	app/helpers/assets_helper.rb
	db/schema.rb
 2017-01-18 11:29:40 +01:00
Luka Murn eb64162633 Remove Gem dependency, add atwho as regular vendor/js 2017-01-05 12:06:59 +01:00
Luka Murn 23e60e0d01 Add Gems for smart annotations (atwho) 2017-01-04 10:51:55 +01:00
zmagod a434649f42 Merge branch 'master' of https://github.com/biosistemika/scinote-web into office_integration 2017-01-03 16:35:25 +01:00
Zmago Devetak c8631077df Merge pull request #361 from biosistemika/improved-sample-table 
Improved sample table
 2016-12-16 15:37:54 +01:00
zmagod 62e4d32221 updated gemfile 2016-12-16 10:45:14 +01:00
zmagod ac52e643be cleanup direct upload 2016-12-08 11:26:13 +01:00
Zmago Devetak 91f29745c4 Merge pull request #314 from ZmagoD/zd_SCI_643 
adds autolink
 2016-12-05 10:47:23 +01:00
Matej Zrimšek 46465060d0 Added automatic sign in with token authentication, needed when signing in from different webpage. [closes SCI-689] 2016-11-30 16:56:56 +01:00
Luka Murn 76ec77fce4 Merge pull request #329 from biosistemika/simplify-signup 
Merge simplify-signup into master
 2016-11-30 09:41:20 +01:00
Luka Murn de7c0ad641 Remove commit reference to quill-rails in Gemfile 2016-11-24 09:19:43 +01:00
zmagod fafecce264 adds autolink to comments, tast desc., step desc., experiment desc., samples table 'only custom fields', checklists [fixes SCI-643] 2016-11-23 14:18:50 +01:00
Mojca Lorber 60f23b109b integrate reCaptcha into sciNote 2016-11-22 14:57:41 +01:00
Luka Murn 26d04b1f3c Merge branch 'rich-text-formatting' into 'master' 
Conflicts:
	Gemfile.lock
	app/assets/stylesheets/themes/scinote.scss
 2016-11-17 16:39:33 +01:00
Luka Murn d1701bd7ae Merge pull request #276 from Ducz0r/lm-sci-637 
Automatically resize textarea elements [SCI-637]
 2016-11-17 09:58:36 +01:00
Luka Murn 8302a87671 Update Gemfile 2016-11-16 10:07:18 +01:00
Luka Murn fa6d8d3020 Save first time tutorial Activity-s without callbacks 
This PR adds a new, pretty useful little gem called sneaky-save.
Closes SCI-655
 2016-11-14 15:55:44 +01:00
Zmago Devetak a5637a65a0 Merge pull request #274 from ZmagoD/zd_SCI_639 
Customize the library SCI-639
 2016-11-11 12:15:23 +01:00
Luka Murn 55f9633d1d Add jQuery.autosize plugin 2016-11-11 09:09:41 +01:00
zmagod df43614f00 swithced quill gem to master branch 2016-11-10 14:15:39 +01:00
Mojca Lorber 3e162b3a93 remove redcarpet gem - markdown 2016-11-10 14:11:32 +01:00
zmagod 7c7106d8ff included updated guill-rails version [fixes SCI-639] 2016-11-10 14:04:22 +01:00
Mojca Lorber ab0879e8d6 Integrate library with default settings 2016-11-09 13:09:53 +01:00
Luka Murn 02d3e03f75 Bugfix for notification emails 
The URLs in notification emails didn't get server URL prepended,
so users could not click on them.
 2016-10-13 12:12:28 +02:00
Luka Murn 448daab7c8 Merge pull request #207 from biosistemika/add-deface-hotfix 
Merge hotfix 1.3.1 into master
 2016-10-07 18:26:13 +02:00
zmagod 32f03ec94c Add Deface hooks 2016-10-06 16:47:36 +02:00
Matej Zrimšek 5d5681bffe Added code semantic and style checking for JS, ERB, and SCSS files. JS, ERB and RUBY checkers were also bound to Hound. 2016-10-05 14:28:34 +02:00
Jure Grabnar b51f2a3027 Add basic WOPI proof checking 
Still missing validation of timestamp.
Remove web_console gem for testing.
Add relevant tests from manual for WOPI proof.
 2016-09-28 09:33:44 +02:00
Nejc Bernot b2b1d5a8f5 Initial commit of WOPI integration 2016-09-28 09:33:44 +02:00
Matej Zrimšek c6a23aab98 Added missing validations for text fields. Added text trimming, which removes spaces from beginning and ending of text. [fixes SCI-408] 2016-09-21 19:37:36 +02:00
Matej Zrimšek 84693bfbf7 Added gem for smart code searching 2016-09-13 18:53:54 +02:00
zmagod ca0ba1403d set flask icon to experiment [fixes SCI-330] 2016-08-17 14:17:29 +02:00
zmagod 1a56396eb5 add workflow image to project overview page [fixes SCI-41] 2016-08-08 16:02:17 +02:00
Jure Grabnar b402d67f24 Add rubocop gem to development env 2016-08-03 12:52:51 +02:00
zmagod 0955d1c66a 1. Fixed fixtures 
2. Added shoulda matcher gem
3. Added Experiment test suite
4. Fixed failing tests
 2016-07-27 10:49:13 +02:00
Luka Murn 076b67620f Migration GitLab -> GitHub 2016-07-21 13:11:15 +02:00
Luka Murn 055298fee8 Initial commit. 2016-02-12 16:52:43 +01:00