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13398 commits 70 branches 179 tags 165 MiB
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3016 commits

Author SHA1 Message Date
Anton 6966c6cba4 Fix messages filter in notifcation flyout [SCI-8317] 2023-04-14 13:16:34 +02:00
Anton acd6413ca3 Fix navigation sidebar [SCI-8288] 2023-04-14 11:38:28 +02:00
aignatov-bio cbd84b94b4
Merge pull request #5288 from aignatov-bio/ai-sci-8280-add-counters-logic-to-notifications 
Add counters logic for notifications [SCI-8280]
 2023-04-13 15:35:56 +02:00
Anton cb7f41e516 Add counters logic for notifications [SCI-8280] 2023-04-13 15:35:21 +02:00
ajugo e85f1f8bbd
Show error message for protocols templates with same name [SCI-8247] (#5266) 2023-04-13 15:34:36 +02:00
aignatov-bio 9466b119a1
Merge pull request #5297 from scinote-eln/features/navigation-refactor 
Features/navigation refactor
 2023-04-13 13:59:25 +02:00
ajugo af7ec3d86d
Fix flash message for step text [SCI-7959] (#5291) 2023-04-12 14:57:46 +02:00
aignatov-bio 78d41d10a6
Revert "Improve breadcrumbs implementation [SCI-8087]" 2023-04-12 14:04:20 +02:00
artoscinote fa64c8bb5c
Merge pull request #5283 from sboursen-scinote/sb_SCI-8223 
CSS: Protocol template list of smaller issues [SCI-8223]
 2023-04-12 12:58:25 +02:00
sboursen-scinote 8d3c473898 Fix hound [SCI-8223] 2023-04-11 17:19:26 +02:00
sboursen-scinote 2ae01c4da9 Fix save protocol with existing name error message [SCI-8223] 2023-04-11 17:14:29 +02:00
G-Chubinidze 9ba8cc328b
Revert "Revert "Search by team does not work [SCI-7763]"" 2023-04-11 18:09:24 +04:00
Soufiane 0f8918e9f6
Revision notes written in version modal are not seen/saved [SCI-8279] (#5272) 
* Load latest protocol version comment in publish modal [SCI-8279]

* Check publish permission before updating the draft comment [SCI-8279]
 2023-04-11 12:50:14 +02:00
aignatov-bio 58c84634a6
Merge pull request #5238 from sboursen-scinote/sb_SCI-8087 
Improve breadcrumbs implementation [SCI-8087]
 2023-04-06 19:52:33 +02:00
artoscinote f2df505cfe
Merge pull request #5263 from okriuchykhin/ok_SCI_8207 
Refactor user_notifications controller, remove unused code [SCI-8207]
 2023-04-06 16:03:40 +02:00
artoscinote 890687052b
Fix permission team scoping in API [SCI-8265] (#5261) 2023-04-06 15:26:39 +02:00
Oleksii Kriuchykhin 60579465ab Refactor user_notifications controller, remove unused code [SCI-8207] 2023-04-06 14:57:00 +02:00
sboursen-scinote 1bd0d693b8 Remove uneccessary variables [SCI-8087] 2023-04-06 14:02:17 +02:00
Anton 624ea16d1f Update top navigation menus [SCI-8262] 2023-04-06 13:07:02 +02:00
sboursen-scinote e2c0c1a982 Remove uneccessary variables [SCI-8087] 2023-04-06 12:44:20 +02:00
sboursen-scinote 7a3d5e03f4 Refactore after review [SCI-8087] 2023-04-06 12:23:33 +02:00
sboursen-scinote d58a0004f6 Fix hound [SCI-8087] 2023-04-05 16:59:39 +02:00
sboursen-scinote 5fc798cf6e Refactor P/E/T breadcrumbs implementation using a concern [SCI-8087] 2023-04-05 16:20:41 +02:00
artoscinote 42a6f258a4
Merge pull request #5252 from okriuchykhin/ok_SCI_8199 
Fix TinyMCE issue in project export, small fixes for protocols [SCI-8199]
 2023-04-04 14:02:59 +02:00
Oleksii Kriuchykhin a70d8dea74 Fix TinyMCE issue in project export, small fixes for protocols [SCI-8199] 2023-04-04 13:42:20 +02:00
Soufiane 1a1956e163
Change wording for access management to cover project and templates (EDIT 2) [SCI-8231] (#5251) 
* Use I18n [SCI-8231]

* Consolidate the message translations [SCI-8231]
 2023-04-04 11:55:00 +02:00
artoscinote 96785ae24d
Merge pull request #5250 from sboursen-scinote/sb_SCI-8231 
Change wording for access management to cover project and templates (EDIT)  [SCI-8231]
 2023-04-04 11:25:53 +02:00
sboursen-scinote 28b7be3779 Fix Hound [SCI-8231] 2023-04-04 11:16:37 +02:00
sboursen-scinote 7ad447d4f2 Change the wording when count is 0 [SCI-8231] 2023-04-04 11:06:38 +02:00
Martin Artnik 79b4f0d03d Add display of validation errors to TinyMCE [SCI-8246] 2023-04-03 15:34:59 +02:00
Alex Kriuchykhin bed256cd37
Merge pull request #5231 from artoscinote/ma_SCI_8131 
Handle removal of last owner public group [SCI-8131]
 2023-04-03 13:02:38 +02:00
Martin Artnik 132593c854 Prevent removal of last manually assigned user manager [SCI-8131] 2023-04-03 11:46:32 +02:00
sboursen-scinote 8ae354b180 Merge branch 'features/navigation-refactor' into sb_SCI-8087 2023-04-02 17:33:23 +02:00
Anton 0c76d7a9b1 Merge branch 'develop' into features/navigation-refactor 2023-03-31 20:31:30 +02:00
ajugo a2e6dc7444
Fix missing protocol template name in activity for create [SCI-8242] (#5233) 
* Fix missing protocol template name in acitvity for create [SCI-8242]

* Rename @new variable into @new_protocol [SCI-8242]
 2023-03-31 14:48:23 +02:00
ajugo 562577e960
Add flash message for removing all users [SCI-8238] (#5232) 2023-03-31 12:14:26 +02:00
ajugo f535bc1fa0
Fix protocol counter on my statistics [SCI-8240] (#5228) 2023-03-31 10:01:58 +02:00
sboursen-scinote 31b979cde9 Add prefix for archived elements [SCI-8087] 2023-03-30 21:22:33 +02:00
sboursen-scinote 42687547cf Refactor the implementation in projects and experiements [SCI-8087] 2023-03-30 19:13:15 +02:00
sboursen-scinote b43d14f549 Implement layout breadcrumbs for Protocols and Label templates [SCI-8087] 2023-03-30 19:07:18 +02:00
sboursen-scinote 95797ab8dd Implement layout breadcrumbs for Inventories [SCI-8087] 2023-03-30 18:42:27 +02:00
sboursen-scinote eda4f140ee Implement layout breadcrumbs for Experiments and Tasks [SCI-8087] 2023-03-30 17:01:47 +02:00
sboursen-scinote 6cf3782339 Implement layout breadcrumbs for Projects and project folders [SCI-8087] 2023-03-30 16:29:21 +02:00
ajugo e1cf9775fd
Add new activites for all team members [SCI-8224] (#5227) 2023-03-30 16:04:57 +02:00
Oleksii Kriuchykhin 89a45d2b14 Merge branch 'hotfix/1.26.6.4' into develop 2023-03-29 10:39:51 +02:00
Oleksii Kriuchykhin ee7abc2912 Fix step table renaming [SCI-8216] 2023-03-28 16:03:45 +02:00
Oleksii Kriuchykhin 0beb64511d Fix saving of big tables on steps [SCI-8216] 2023-03-28 13:29:02 +02:00
Alex Kriuchykhin 3d8717e994
Merge pull request #5186 from okriuchykhin/ok_SCI_8177 
Improve error handling in protocol archive/restore actions [SCI-8177]
 2023-03-27 13:11:11 +02:00
Martin Artnik 9904c7aae3 Add error flash when assignment update fails [SCI-8131] 2023-03-27 12:38:01 +02:00
Alex Kriuchykhin 678d51692e
Merge pull request #5194 from artoscinote/ma_SCI_8131 
Prevent removing/changing role for last user with user manage permission on protocol [SCI-8131]
 2023-03-24 13:58:57 +01:00
Martin Artnik b1cce70cc6 Preven removing last user manager for protocols/projects [SCI-8131] 2023-03-24 13:32:38 +01:00
Alex Kriuchykhin e7bd133895
Merge pull request #5191 from aignatov-bio/ai-sci-8160-update-front-end-permission-for-version-comment 
Update front end permission check for version comment [SCI-8160]
 2023-03-24 13:14:03 +01:00
Anton 9818e41353 Update front end permission check for version comment [SCI-8160] 2023-03-24 13:11:14 +01:00
ajugo 2734c86ef5
Show/hide duplicate button on team permission change in protocol template repository [SCI-8150] (#5190) 2023-03-24 11:52:48 +01:00
artoscinote 00191e41de
Merge pull request #5192 from scinote-eln/features/token-revocation 
Features/token revocation
 2023-03-24 11:13:38 +01:00
Alex Kriuchykhin 5016034189
Merge pull request #5187 from artoscinote/ma_SCI_8182 
Fix issues with protocol assignments and published attributes [SCI-8182]
 2023-03-24 11:05:12 +01:00
Martin Artnik 2ddbc0ed90 Fix protocol migration/assignment issues [SCI-8182] 2023-03-24 10:58:43 +01:00
Oleksii Kriuchykhin f2c8f67791 Improve error handling in protocol archive/restore actions [SCI-8177] 2023-03-23 15:32:22 +01:00
Oleksii Kriuchykhin 7ef2f68078 Merge branch 'hotfix/1.26.6.3' into develop 2023-03-23 13:26:12 +01:00
Anton 854fc1764b Refactor left/top navigation [SCI-8055] 2023-03-22 14:08:21 +01:00
Oleksii Kriuchykhin 3443a6fb85 Fix create step comments permissions [SCI-8174] 2023-03-22 12:52:08 +01:00
G-Chubinidze 44cc9d1c90
Revert "Search by team does not work [SCI-7763]" 2023-03-22 13:22:05 +04:00
ajugo 8eb04c50c2
Add removing connected device [SCI-8146] (#5174) 2023-03-21 16:44:24 +01:00
Alex Kriuchykhin b3889de17b
Merge pull request #5171 from okriuchykhin/ok_SCI_8145 
Fix visibility of save as draft button, fix permissions for new drafts [SCI-8145][SCI-8157]
 2023-03-21 16:40:22 +01:00
Oleksii Kriuchykhin cf599a8277 Fix visibility of save as draft button, fix permissions for new drafts [SCI-8145][SCI-8157] 2023-03-21 16:25:02 +01:00
artoscinote 397e4aeebe
Merge pull request #4935 from G-Chubinidze/gc_SCI_7848 
user_my_modules_controller#index_old action updates [SCI-7848]
 2023-03-21 11:41:38 +01:00
Giga Chubinidze 8e942379ff changed assignee to designated_users 2023-03-21 14:29:23 +04:00
Oleksii Kriuchykhin 7fff3e8f78 Merge branch 'hotfix/1.26.6.2' into develop 2023-03-20 15:36:49 +01:00
Oleksii Kriuchykhin b67691acb5 Merge branch 'develop' into features/protocol_versioning 2023-03-17 13:53:30 +01:00
Alex Kriuchykhin 05c4a1c4f0
Add missing sanitization helper to projects access controller [SCI-8158] (#5162) 2023-03-17 11:25:36 +01:00
Anton 248b6b6581 Remove additional code 2023-03-17 11:11:59 +01:00
Anton da36b7268f Clean old protocol code [SCI-8154] 2023-03-16 14:37:19 +01:00
Alex Kriuchykhin b0251435e5
Improve escaping of special characters in flash messages [SCI-8137] (#5144) 2023-03-15 15:56:47 +01:00
aignatov-bio 44823da268
Fix escaping for dropdown options and keywords escaping [SCI-8137] (#5145) 2023-03-15 12:55:28 +01:00
Alex Kriuchykhin 00c63b280e
Fix displaying of escaped fields [SCI-8137] (#5141) 2023-03-15 11:14:52 +01:00
aignatov-bio 336cf4d855
Fix PET permission propagation [SCI-8132] (#5139) 2023-03-14 18:48:06 +01:00
aignatov-bio 9a3b056d32
Fix access modal for protocol [SCI-8063] (#5128) 2023-03-14 14:49:11 +01:00
Giga Chubinidze 67539b15de Protocol permissions - button display [SCI-8058] 2023-03-14 12:12:54 +04:00
Alex Kriuchykhin d82470aa03
Improve handling and escaping of special characters in input fields [SCI-8125] (#5135) 2023-03-13 18:00:30 +01:00
Anton ca5f61a0e2 Add all team members through access modal [SCI-8063] 2023-03-09 14:13:01 +01:00
artoscinote 66ec451d5e
Merge pull request #5096 from artoscinote/ma_SCI_8093 
Add draft created activity [SCI-8093]
 2023-03-08 10:49:45 +01:00
artoscinote b8c5323fdc
Merge pull request #5094 from artoscinote/ma_SCI_8038 
PET access modal fixes [SCI-8038]
 2023-03-08 10:49:30 +01:00
Martin Artnik e4e8997cc1 Add draft created activity [SCI-8093] 2023-03-07 14:45:52 +01:00
Alex Kriuchykhin bee0fa2de9
Fix protocols re-assigning when removing user from a team [SCI-8034] (#5069) 2023-03-07 14:15:49 +01:00
Martin Artnik 22c039fc77 PET access modal fixes [SCI-8038] 2023-03-07 14:04:05 +01:00
Alex Kriuchykhin f8a4e7ee65
Update logic for linked protocol templates with task [SCI-7973] (#5058) 2023-03-07 13:03:01 +01:00
ajugo 6471dbed5b
Fix missing team at the StepTable creation [SCI-8036] (#5090) 2023-03-07 11:26:57 +01:00
aignatov-bio e090bdf443
Merge pull request #5089 from aignatov-bio/ai-sci-8004-fix-archive-restore-propagation 
Fix archive/restore propagation [SCI-8004]
 2023-03-07 10:59:24 +01:00
artoscinote 5407943bfd
Merge pull request #5083 from artoscinote/ma_SCI_8039 
Protocol/general user assignment changes and fixes [SCI-8039][SCI-8037]
 2023-03-07 10:55:37 +01:00
aignatov-bio e7afc70cab
Merge pull request #5086 from aignatov-bio/ai-sci-8003-fix-wording-for-same-protocol-name 
Fix protocol creation error message [SCI-8003]
 2023-03-07 10:48:12 +01:00
Anton 55dca41434 Fix archive/restore propagation [SCI-8004] 2023-03-07 10:44:44 +01:00
Alex Kriuchykhin 8956d72f12
Switch to showing of total sum of all versions in protocols table [SCI-8066] (#5082) 2023-03-07 09:58:36 +01:00
Anton ca76c78a23 Fix protocol creation error message [SCI-8003] 2023-03-06 19:31:45 +01:00
Martin Artnik 2f29477e02 Protocol/general user assignment changes and fixes [SCI-8039] 2023-03-06 16:43:46 +01:00
ajugo 9379d9a175
Fix load protocol to task [SCI-8072] (#5070) 2023-03-06 10:53:01 +01:00
aignatov-bio d99957d8a1
Merge branch 'features/protocol_versioning' into ai-sci-8021-fix-modifier-name-for-drafts 2023-03-03 20:50:46 +01:00
aignatov-bio da31883ac3
Add error handling to actions in protocol controller [SCI-8073] (#5074) 2023-03-03 15:33:08 +01:00
Alex Kriuchykhin 4fb18a8018
Fix save as draft action [SCI-8068] (#5066) 2023-03-02 16:10:28 +01:00
artoscinote a43bd9d7f9
Merge pull request #5065 from artoscinote/ma_SCI_8059 
Fix display of unauthorized error on protocol page [SCI-8059]
 2023-03-02 15:46:10 +01:00
Martin Artnik 72831cd015 Fix display of unauthorized error on protocol page [SCI-8059] 2023-03-02 15:05:50 +01:00
ajugo 3bdc8feaee
Fix protocol name field editability [SCI-8033] (#5053) 2023-03-02 13:50:47 +01:00
Anton 4eab2c25f3 Save last_modified_by on protocol update [SCI-8021] 2023-03-01 15:19:34 +01:00
Alex Kriuchykhin 9908b31d11
Fix protocols datatable [SCI-7984] (#5046) 2023-03-01 15:04:53 +01:00
Anton 6c7a0d85c2 Fix protocol public assignments [SCI-8019] 2023-02-28 15:15:55 +01:00
artoscinote fab7d9c3d6
Merge pull request #5038 from artoscinote/ma_SCI_7990 
Fix protocol duplication in table [SCI-7990]
 2023-02-28 14:28:08 +01:00
ajugo 96cf2f1d38
Update protocol templates update action on task [SCI-7903] (#5009) 
* Update protocol templates update action on task [SCI-7903]

* Simplify logic for update from parent [SCI-7903]
 2023-02-28 14:17:34 +01:00
Martin Artnik 219814ec06 Change protocol clone to support bulk in future [SCI-7990] 2023-02-28 13:11:49 +01:00
artoscinote e88b84000b
Merge pull request #5021 from artoscinote/ma_SCI_7978 
Protocol permission modal changes [SCI-7978]
 2023-02-27 13:34:32 +01:00
ajugo 0328a32e09
Update import/export for protocol templates [SCI-7986] (#5032) 2023-02-27 13:22:01 +01:00
Alex Kriuchykhin 5de5d64be5
Update external protocol importer backend in order to work with new protocol versioning [SCI-7829] (#5017) 2023-02-27 10:37:51 +01:00
Giga Chubinidze 4d30e28112 Search by team does not work [SCI-7763] 2023-02-27 03:32:06 +04:00
Martin Artnik 89459ae21a Protocol group assignment fixes [SCI-7978] 2023-02-24 17:24:25 +01:00
aignatov-bio 5ef110d985
Add version modal to protocol show page [SCI-7985] (#5018) 2023-02-24 16:17:36 +01:00
Alex Kriuchykhin b2ab467440
Improve loading time of current tasks widget [SCI-7999] (#5022) 
* Improve loading time of current tasks widget [SCI-7999]

* Improve speed of objects search for smart annotations editor [SCI-7999]
 2023-02-24 13:30:55 +01:00
Martin Artnik c24b0fa5ab Refactor access modals [SCI-7978] 2023-02-23 14:57:38 +01:00
Anton 826cb162da Add save as draft action 2023-02-22 14:59:48 +01:00
Anton f7d7113239 Add new protocol activities [SCI-7717] 2023-02-22 10:46:24 +01:00
Anton a95ca75362 Add new protocol modal [SCI-7810] 2023-02-21 14:15:53 +01:00
Anton c775a92914 Update protocolsIo front-end [SCI-7715] 2023-02-21 11:06:54 +01:00
ajugo 4515ab0a65
Fix expire_in method for unauthenticated user [SCI-7943] (#4983) 2023-02-20 10:14:46 +01:00
ajugo 2c079cc918
Update protocol duplication [SCI-7900] (#4992) 2023-02-18 09:09:33 +01:00
ajugo 9a57071d7a
Update restore action for protocol templates [SCI-7634] (#4969) 
* Update restore action for protocol templetes [SCI-7634]

* Move protocol table reload to methond [SCI-7634]
 2023-02-16 18:03:11 +01:00
Alex Kriuchykhin ed76fac640
Speed up loading of current tasks widget [SCI-7885] (#4982) 2023-02-16 13:57:17 +01:00
Anton a4e622b903 Update export action in protocol repository [SCI-7901] 2023-02-16 11:39:54 +01:00
Alex Kriuchykhin 7f8f723cbe
Fix handling of ISS in Azure configuration, fix linked accounts page [SCI-7923] (#4974) 2023-02-14 16:50:15 +01:00
ajugo cb332f163f
Update the Load protocol template to task modal [SCI-7591] (#4870) 
* Update the Load protocol template to task modal [SCI-7591]

* Update the Load protocol template to task modal [SCI-7591]

* Load last protocol version from repository to task [SCI-7591]

* Fix find_by for load_table [SCI-7591]
 2023-02-14 13:19:24 +01:00
Anton ea9d2d8291 Merge branch 'develop' into features/protocol_versioning 2023-02-14 11:07:58 +01:00
Anton dc5cfb9fc3 Add publish and delete action [SCI-7905] 2023-02-13 14:45:22 +01:00
Anton 743d901310 Add published view for protocol [SCI-7617] 2023-02-13 10:41:30 +01:00
Anton 3902310463 Update protocol view screen [SCI-7590] 2023-02-13 09:52:30 +01:00
Anton b55f68c0dc Update archive action for protocol templates [SCI-7898] 2023-02-09 14:10:07 +01:00
aignatov-bio 15d1efa408
Merge pull request #4894 from okriuchykhin/ok_SCI_7718 
Add permission for protocol draft management [SCI-7718]
 2023-02-09 11:34:22 +01:00
artoscinote 77b4a557f1
Merge pull request #4881 from artoscinote/ma_SCI_7631 
Throw error when authenticating with revoked tokens [SCI-7631]
 2023-02-07 13:39:03 +01:00
Anton 94f8d139a1 Fix experiments sidebar sorting [SCI-7894] 2023-02-07 13:35:00 +01:00
artoscinote 88cc8e3df4
Amend token revocation check method name [SCI-7631] 2023-02-07 11:05:48 +01:00
artoscinote db75d1cb34
Merge pull request #4938 from sboursen-scinote/sb_SCI-7831 
No warning message on modal, when importing existing protocol from protocols.io into My Protocols [SCI-7831]
 2023-02-06 16:59:08 +01:00
aignatov-bio bfb035d339
Merge pull request #4936 from aignatov-bio/ai-sci-7834-save-handson-table-metadata 
Save handson table metadata [SCI-7834]
 2023-02-06 14:24:51 +01:00
Anton 3849b1a7a1 Save handson table metadata [SCI-7834] 2023-02-06 14:21:55 +01:00
sboursen-scinote 93851b8c90 Fix code style issues [SCI-7831] 2023-02-06 13:49:34 +01:00
sboursen-scinote 9023e8d1d4 Standarize the returned json when the request is not succesful [SCI-7831] 2023-02-06 13:31:11 +01:00
artoscinote d9beafd9a7
Merge pull request #4903 from sboursen-scinote/sb_SCI-7676 
CSS: error messages at moving experiment [SCI-7676]
 2023-02-06 11:12:45 +01:00
Giga Chubinidze b06b5c4d1f Check what's up with user_my_modules_controller#index_old action, and remove/rename it [SCI-7848] 2023-02-05 23:27:22 +04:00
Alex Kriuchykhin 15ac306244
Fix user auto linking with Azure AD [SCI-7764] (#4924) 2023-02-02 13:27:49 +01:00
Alex Kriuchykhin dadb2fdf06
Merge pull request #4909 from okriuchykhin/ok_SCI_7816 
Fix date time inventories reminder processing [SCI-7816]
 2023-02-01 16:26:54 +01:00
Oleksii Kriuchykhin e887e7c82b Merge branch 'develop' into features/sso-improvements 2023-02-01 16:08:56 +01:00
Alex Kriuchykhin 94806047c0
Make SSO feature switchable [SCI-7764] (#4916) 2023-02-01 15:43:20 +01:00
artoscinote c88e63f8d9
Merge pull request #4893 from G-Chubinidze/gc_SCI_7813 
Lost sorting selection on experiment table view [SCI-7813]
 2023-02-01 09:30:27 +01:00
Alex Kriuchykhin e1c4aa9469
Move Okta and Azure AD configurations to application settings [SCI-7609] (#4732) 2023-01-31 11:55:31 +01:00
Oleksii Kriuchykhin fa96a9a939 Fix date time inventories reminder processing [SCI-7816] 2023-01-30 17:07:27 +01:00
sboursen-scinote 42eae72d2a Update the layout of the move-experiment-modal when there are errors [SCI-7676] 2023-01-30 12:00:33 +01:00