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193 commits

Author SHA1 Message Date
Anton Ignatov fe620c4a63 Add marvin model and controller 2019-04-26 22:59:38 +02:00
Anton Ignatov baa9b94a63 Add new graph button to step 2019-04-26 20:33:20 +02:00
Anton Ignatov 40c1c9aef7 Add marvin js modal 2019-04-26 18:24:21 +02:00
Urban Rotnik dba1ccfc34
Merge pull request #1705 from urbanrotnik/ur-sci-3387-office-files-icons 
Show icons for office files [SCI-3387]
 2019-04-26 15:53:53 +02:00
aignatov-bio 57b80280dc
Update attachemnts css (#1700) 2019-04-26 15:20:39 +02:00
Urban Rotnik c41413234c Use MS office icons for MS files 2019-04-26 09:29:39 +02:00
Anton Ignatov 0779ed598b Reuse inline editing logic 2019-04-25 11:14:55 +02:00
Anton Ignatov e52b985e7b xMerge branch 'ur-sci-3135-comments-section-changes' of https://github.com/urbanrotnik/scinote-web into urbanrotnik-ur-sci-3135-comments-section-changes 2019-04-24 13:40:41 +02:00
Oleksii Kriuchykhin 88123f5ecd Fix paths for highlightjs-github-theme [SCI-3377] 2019-04-24 12:35:01 +02:00
Urban Rotnik 774521df7a Changes to comments section in Task Steps 2019-04-23 15:02:58 +02:00
Urban Rotnik 11a7a975af Merge branch 'features/scinote-improvements' into master-with-note-section 2019-04-23 14:50:03 +02:00
Urban Rotnik 7a2bfc12ce Remove form_asset partial 2019-04-23 13:50:48 +02:00
Urban Rotnik b1dabaca15 New helper for file thumbnails 2019-04-23 13:50:48 +02:00
Urban Rotnik ea0368aa11 Attachments update for edit page 2019-04-23 13:50:47 +02:00
Anton Ignatov aa2dab2014 Merge branch 'features/note-section' into master-with-note-section 2019-04-23 10:31:37 +02:00
Urban Rotnik ee3dc571e1 Update attachments view, add ordering on FE 2019-04-09 14:17:40 +02:00
Urban Rotnik a3932cc67f New asset box style update 2019-04-09 14:17:40 +02:00
Urban Rotnik 26cf8271a1 Change step header, remove vertical line 2019-04-05 10:57:38 +02:00
Jure Grabnar cbf109f884 Fix create WOPI file button 
Closes SCI-3137
 2019-04-04 17:05:25 +02:00
Jure Grabnar 613843d095 Temp commit 2019-04-04 16:58:55 +02:00
Jure Grabnar 9a4cd4fda2 Add file_present true 2019-04-04 16:57:36 +02:00
Jure Grabnar 3b8e6fa47c Test office online 2019-04-04 16:57:36 +02:00
Jure Grabnar 26848ecaef Refactor step position + 1 into a method 2019-04-03 13:07:30 +02:00
Miha Mencin 1b19e67c07 Revert "Step header changes, removed vertical line" 
This reverts commit b0f0ded87d.
 2019-03-27 10:21:40 +01:00
Urban Rotnik b0f0ded87d Step header changes, removed vertical line 
SCI-3134
 2019-03-25 17:25:13 +01:00
Anton Ignatov 4ec0a3c871 Update TinyMCE image loader for new fields 2019-03-22 10:52:26 +01:00
Anton Ignatov bc58f0aecd Merge branch 'features/note-section' into ai-sci-3131-improve-image-file-upload 2019-03-21 11:48:51 +01:00
Anton Ignatov 07c2819163 refactoring tinymce image uploading 2019-03-20 14:46:54 +01:00
Oleksii Kriuchykhin eb3d1ea6fe Update RTE for step description [SCI-3111] 2019-03-19 17:42:49 +01:00
mz3944 4d460d14ea
Merge pull request #1378 from mz3944/mz-SCI-2861 
All users in smart annotation have removed in brackets [SCI-2861]
 2018-11-20 21:22:23 +01:00
Matej Zrimšek c144d599fc Fix user smart annotation showing as if the user is removed from team [SCI-2861] 2018-11-19 08:02:25 +01:00
Oleksii Kriuchykhin fb309a12b9 Refactor result and step comments initialization [SCI-2830] 2018-11-13 16:57:42 +01:00
Luka Murn 63b4f7d909
Merge pull request #1274 from Zanz2/zz_in_app_tooltips_help_sci2662 
Added Tooltips (bootstrap popovers) for various elements in scinote [SCI-2662]
 2018-09-24 16:23:53 +02:00
Zanz2 22a565a684 Made fixes according to review 2018-09-14 13:07:09 +02:00
Zanz2 2d1d4c78bc
Merge branch 'master' into zz_in_app_tooltips_help_sci2662 2018-08-21 11:27:01 +02:00
Zanz2 36cca3d6aa Implemented popover tooltips in all specified places, and fixed a bug where old popovers were open on page switch with ajax 2018-08-21 11:11:25 +02:00
Zanz2 1159a32ce2 Implemented all except 2 tooltips, debbugging why they dont work now 2018-08-20 13:03:30 +02:00
Zanz2 dfcaa40f1a
Merge branch 'master' into zz_refactor_icons_sci_2445_v2 2018-08-14 13:33:43 +02:00
Zanz2 45a4c1c598 changed the icons as per last comment in jira issue 2018-08-14 13:26:48 +02:00
Oleksii Kriuchykhin 6669beaf0e Change icons throughout the rest of application [SCI-2445] 2018-07-27 15:27:08 +02:00
mlorb c4ecfc4d38 Change icons throughout sciNote - navigation, project, task cards 2018-05-22 16:55:58 +02:00
mlorb 81392362ac Final button colour changes 2018-05-18 16:24:24 +02:00
mlorb 7df40e56c7 UI/UX restyle - fixes throughout application part one 2018-05-08 16:33:42 +02:00
mlorb 763d934aa7 fix buttons again 2018-04-26 15:02:24 +02:00
mlorb 9e11f3b220 update buttons positions and wording throughout app 2018-04-25 13:57:12 +02:00
zmagod b4deb232c0 rename variable: not_in_repository => display_image_tag 2018-04-12 13:40:17 +02:00
zmagod 233e73c709 adds asset preview link to repository row modal and to table row item [fixes SCI-2110] 2018-04-10 17:06:53 +02:00
Oleksii Kriuchykhin cc5d8550b1 Refactor file preview modal [SCI-2217] 2018-03-30 11:50:28 +02:00
mz3944 bb21f6543c
Merge pull request #1004 from mz3944/mz-SCI-2011 
Wrapping up the permissions [SCI-2011]
 2018-03-06 07:10:40 +01:00
Luka Murn 070450f813 Merge branch 'release-1.12.11' 
Conflicts:
	config/initializers/extends.rb
 2018-03-01 14:04:57 +01:00
Oleksii Kriuchykhin aa933ad1f4 Add extendable file types mappings for icons [PIP-46] 2018-02-26 14:23:02 +01:00
Matej Zrimšek 5bda53eebf Overall refactoring of all canaid permissions and code related to their calls. 2018-02-16 10:54:06 +01:00
Matej Zrimšek 8ef6c8f91f Refactored remaining experiment level permissions (and everything below it). 2018-02-14 14:39:07 +01:00
Matej Zrimšek d6e7ef465c Grouped remaining permissions for experiment, protocol, task, and partially step levels. [SCI-1964] 2018-02-14 14:19:22 +01:00
Matej Zrimšek 854333b0e6 Grouped permissions for experiment with canaid gem (WIP). 2018-02-14 14:19:00 +01:00
zmagod f8a3fca2db Merge branch 'master' of https://github.com/biosistemika/scinote-web into decoupling 2018-01-23 11:06:33 +01:00
mlorb 806fcbce36 refactor update protocol in repository permission 2017-12-14 14:18:16 +01:00
mlorb e0d1ae174e refactor read protocol in repository permission 2017-12-14 14:18:15 +01:00
Zmago Devetak 00be4460cc
Merge pull request #806 from ZmagoD/disable_tiny_mce_asset_unless_step 
Fixes bug with embedded images [SCI-1624]
 2017-12-12 09:53:24 +01:00
okriuchykhin b3b0e367e8
Merge pull request #889 from okriuchykhin/ok_SCI_1747 
Improve server side assets validation display for steps [SCI-1747]
 2017-12-04 14:12:43 +01:00
zmagod 066c782cd2 Merge branch 'master' of https://github.com/biosistemika/scinote-web into disable_tiny_mce_asset_unless_step 2017-11-24 16:29:32 +01:00
zmagod afbeafb137 adds RTE images import, disables turbolinks on edit step actions 2017-11-22 16:28:14 +01:00
Oleksii Kriuchykhin fe8b7d26c1 Improve server side assets validation display for steps [SCI-1747] 2017-11-21 13:48:06 +01:00
zmagod 3dc3ed906f fixes bug with embedded images [fixes SCI.1624] 2017-10-02 18:06:42 +02:00
zmagod 33b996ffee refactor 2017-06-09 09:49:57 +02:00
zmagod c6bb20039b adds drag'n drop feature in task results [fixes SCI-1011], [fixes SCI-1310] and [fixes SCI-285] 2017-06-07 13:29:39 +02:00
zmagod 67d902db52 refactor 2017-06-05 10:43:58 +02:00
zmagod 1c021b11db adds drag and drop files upload to steps [fixes SCI-1310] 2017-06-02 16:34:09 +02:00
zmagod 2081e0a94b Merge branch 'master' of https://github.com/biosistemika/scinote-web into release-1.10.1 2017-05-10 15:14:17 +02:00
zmagod 8d0c22327b adds asc order to checklists [fixes SCI-1228] 2017-05-04 15:17:34 +02:00
zmagod 55c8c498e2 add image upload functionality to result text 2017-04-24 12:28:27 +02:00
zmagod 550f563666 working version for steps first run 2017-04-21 16:09:04 +02:00
zmagod c25df63a14 add tinymce img importer and refactor input sanitize helper 2017-04-19 09:11:52 +02:00
Oleksii Kriuchykhin 4fac6484b5 Hide office edit buttons in protocol preview and fix image preview in protocol edit [SCI-877] 2017-04-14 16:05:35 +02:00
zmagod 7b16e5643e fix assets preprocesor for wopi files 2017-03-13 13:20:49 +01:00
zmagod 0c2523beca Merge branch 'master' of https://github.com/biosistemika/scinote-web into office_integration 2017-03-10 16:21:43 +01:00
Luka Murn 86a800a84e Open edit/view Office files in new browser tab/window 
Closes SCI-838.
 2017-03-06 14:12:18 +01:00
Oleksii Kriuchykhin c55f3cb99c Add flag to disable simple_format in custom_auto_link [SCI-940] 2017-01-25 17:18:19 +01:00
Oleksii Kriuchykhin 310d8c1920 Refactor smart annotation/auto_link/simple_format rendering [SCI-940] 2017-01-25 17:18:19 +01:00
Mojca Lorber 2277af534c fix table titles 2017-01-25 11:01:35 +01:00
Luka Murn 53699193a2 Merge branch 'smart-annotations' 
Conflicts:
	app/assets/javascripts/comments.js.erb
	app/assets/javascripts/protocols/index.js
	app/assets/javascripts/protocols/steps.js.erb
	app/assets/javascripts/samples/sample_datatable.js.erb
	app/controllers/my_module_comments_controller.rb
	app/controllers/project_comments_controller.rb
	app/controllers/result_comments_controller.rb
	app/controllers/step_comments_controller.rb
	app/datatables/sample_datatable.rb
	app/views/my_module_comments/_comment.html.erb
	app/views/project_comments/_comment.html.erb
	app/views/projects/show/_experiment.html.erb
	app/views/reports/elements/_experiment_element.html.erb
	app/views/reports/elements/_result_comments_element.html.erb
	app/views/reports/elements/_result_text_element.html.erb
	app/views/reports/elements/_step_checklist_element.html.erb
	app/views/reports/elements/_step_comments_element.html.erb
	app/views/reports/elements/_step_element.html.erb
	app/views/result_comments/_comment.html.erb
	app/views/results/_result_text.html.erb
	app/views/step_comments/_comment.html.erb
	app/views/steps/_step.html.erb
	db/schema.rb
 2017-01-24 14:33:23 +01:00
mlorb 9a3c56de97 Merge pull request #421 from mlorb/ml_sci_540 
Protocol steps/results - adding titles for tables [SCI-540]
 2017-01-20 11:41:49 +01:00
Mojca Lorber 6653f0d4c1 small fixes 2017-01-19 16:42:14 +01:00
zmagod f2d5066dc7 fix some bugs 2017-01-19 11:37:59 +01:00
zmagod 27d3868f37 fix bugs 2017-01-19 09:40:39 +01:00
zmagod 65fa631b1c adding tinyMce first run 2017-01-18 22:40:08 +01:00
Mojca Lorber dde9854bf1 update protocol import/export and clone 2017-01-18 14:22:19 +01:00
Mojca Lorber b3c423c582 add table name in protocol step 2017-01-18 14:22:18 +01:00
Oleksii Kriuchykhin a490a12fb1 Add truncation of image description in the preview [SCI-873] 2017-01-18 13:28:56 +01:00
Luka Murn cf72da5635 Merge branch 'improved-files-handling' into 'master' 
Conflicts:
	app/assets/javascripts/protocols/steps.js.erb
	app/helpers/assets_helper.rb
	db/schema.rb
 2017-01-18 11:29:40 +01:00
okriuchykhin 02bfd19d1c Merge pull request #385 from okriuchykhin/ok_SCI_102 
Fix XSS on activites and throghout the rest of app [SCI-102]
 2017-01-16 11:41:38 +01:00
Oleksii Kriuchykhin 0350f2f792 Add html escaping to name filelds in the views [SCI-102] 2017-01-12 11:03:14 +01:00
Oleksii Kriuchykhin d05c16b0ba Added auto_link wrapper with custom sanitization [SCI-102] 2017-01-11 17:02:17 +01:00
Oleksii Kriuchykhin 0546716a0b Improve user input sanitization, fix bugs [SCI-102] 2017-01-11 15:50:11 +01:00
zmagod 3a1ec0eb5e refactor [fixes SCI-834] [fixes SCI-837] [fixes SCI-823] [fixes SCI-835] [fixes SCI-836] [fixes SCI-824] 2017-01-11 14:56:47 +01:00
Matej Zrimšek 852dc2eb7e Added file downloading to protocol preview in protocol repository. [SCI-878] 2017-01-11 14:14:12 +01:00
zmagod 89e8946a47 expand smart annotation 2017-01-10 14:14:21 +01:00
zmagod 94262b56ef prepare data for atwho 2017-01-10 14:14:21 +01:00
Oleksii Kriuchykhin aa2b573278 Enable image preview while editing steps and code style improvements [SCI-694] 2017-01-06 15:58:23 +01:00
Oleksii Kriuchykhin cd3924afd3 Sanitize .html_safe marked strings which contain tags [SCI-102] 2017-01-05 13:04:19 +01:00