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5139 commits 43 branches 185 tags 169 MiB
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720 commits

Author SHA1 Message Date
zmagod
4573655ec8 adds save PDF report to inventory feature [fixes SCI-2371] 2018-05-16 09:31:19 +02:00
Oleksii Kriuchykhin
39d594b0da Disable some validations in repository import to improve speed [SCI-2404] 2018-05-15 11:14:43 +02:00
Zmago Devetak
0a4deeaa35
Merge pull request #1112 from ZmagoD/zd_SCI_2261 
propagate assigned repository items in workflow [fixes SCI-2261]
 2018-05-10 09:57:49 +02:00
Zmago Devetak
d744f24b85
Merge pull request #1118 from ZmagoD/zd_SCI_2323 
sign_out user after 7 days [fixes SCI-2323]
 2018-05-03 14:36:44 +02:00
Zmago Devetak
19d5c687ef
remove unneeded :rememberable module 2018-05-03 14:35:59 +02:00
Zmago Devetak
4fe4fea4fc
Merge pull request #1122 from ZmagoD/zd_SCI_2339 
repository when sorting/searching bug fix [SCI-2339]
 2018-05-03 12:05:39 +02:00
zmagod
0584453575 fixes per @okriuchykhin 's request 2018-04-26 17:18:03 +02:00
zmagod
8dac887f10 Merge branch 'ux-release-1' of https://github.com/biosistemika/scinote-web into zd_SCI_2261 2018-04-26 14:18:41 +02:00
zmagod
24acd5c779 fixes per @duco 's request 2018-04-26 14:13:46 +02:00
Luka Murn
cb6fe50832 Merge branch 'master' into ux-release-1 
Conflicts:
	app/assets/javascripts/repositories/index.js
 2018-04-26 11:38:54 +02:00
zmagod
23f8f35a2c a shotgun surgery that fixes searching/filtering of repository_rows [fixes SCI-2339] 2018-04-26 11:05:02 +02:00
Luka Murn
cd04596c62
Merge pull request #1111 from Ducz0r/lm-sci-2276-fix 
Update the code for repository table states so it (hopefully) causes less errors [SCI-2276]
 2018-04-25 12:37:27 +02:00
zmagod
199a2a23bf fixes per @mlorb 's request 2018-04-23 12:26:21 +02:00
Luka Murn
d023db16af Update the destroy_column action so it properly updates all states 2018-04-20 12:31:22 +02:00
Luka Murn
21e7e7057e Refactor all the methods into two new services 2018-04-20 12:31:22 +02:00
Luka Murn
d8ca42aa0c Refactor repository_table_state and its class methods 2018-04-20 12:31:22 +02:00
Luka Murn
5e2622ecfc Change default repository state to Ruby representation 
Also remove some dead code from repositories datatables
 2018-04-20 12:31:22 +02:00
zmagod
c23eacfe13 fixes for_admin action/ test visible_by functlion 2018-04-19 12:41:00 +02:00
zmagod
9d282d1800 adds new reports index page [fixes SCI-2124] 2018-04-18 16:47:52 +02:00
Luka Murn
9bf8b5d864 Merge branch 'ok_SCI_1860' of https://github.com/okriuchykhin/scinote-web into okriuchykhin-ok_SCI_1860 
Conflicts:
	Makefile
	app/assets/javascripts/projects/index.js.erb
	app/assets/stylesheets/themes/scinote.scss
	config/locales/en.yml
 2018-04-12 13:16:46 +02:00
zmagod
024032faff refactor update protocol keywords action [fixes SCI-2257] 2018-04-06 15:41:50 +02:00
zmagod
6e255a4657 fixes failing specs 2018-04-04 14:44:32 +02:00
zmagod
e630d3113f add ID column to repository [fixes SCI-2206] 2018-04-04 11:55:11 +02:00
Oleksii Kriuchykhin
e42fc3117b Implement search in file repository cells and improve performance [SCI-2111] 2018-03-26 13:19:09 +02:00
Zmago Devetak
75d7ace8c7
Merge pull request #1017 from ZmagoD/zd_SCI_2068 
Write server-side endpoints for custom repositories [SCI-2068]
 2018-03-20 14:30:47 +01:00
okriuchykhin
d906baff61
Merge pull request #1039 from okriuchykhin/ok_SCI_1697 
Improve connections between repository models [SCI-1697]
 2018-03-19 16:42:55 +01:00
Oleksii Kriuchykhin
a105e61d48 Remove tutorial [SCI-1860] 2018-03-18 13:18:05 +01:00
Oleksii Kriuchykhin
9371d77762 Improve connections between repository models [SCI-1697] 2018-03-16 13:12:33 +01:00
zmagod
fad4001273 fix edit row action 2018-03-16 12:27:19 +01:00
Oleksii Kriuchykhin
27a605d974 Fix failing test [SCI-2148][SCI-2149] 2018-03-16 11:05:38 +01:00
zmagod
1cdba5e0d3 Merge branch 'samples_to_repositories_table_migration' of https://github.com/biosistemika/scinote-web into zd_SCI_2068 2018-03-16 11:05:16 +01:00
zmagod
d69754af04 implement search on list items dropdown, update, create actions [fixes SCI-2070] 2018-03-15 15:43:16 +01:00
zmagod
b67a54e2d1 Merge branch 'samples_to_repositories_table_migration' of https://github.com/biosistemika/scinote-web into zd_SCI_2024_fix_custom_repositores_import 2018-03-13 15:25:57 +01:00
okriuchykhin
503617b42c
Merge branch 'samples_to_repositories_table_migration' into zd_SCI_2025 2018-03-13 14:44:20 +01:00
zmagod
dd2f7dd417 Merge branch 'master' of https://github.com/biosistemika/scinote-web into samples_to_repositories_table_migration 2018-03-13 13:24:36 +01:00
Oleksii Kriuchykhin
269f7d74fa Add explicit ordering to samples_tables [SCI-2148][SCI-2149] 2018-03-13 13:16:34 +01:00
okriuchykhin
262c21d145
Merge pull request #1036 from okriuchykhin/ok_SCI_2078 
Implement importable selector for repository columns [SCI-2078]
 2018-03-13 13:14:53 +01:00
Oleksii Kriuchykhin
be1ead22e0 Implement importable selector for repository columns [SCI-2078] 2018-03-13 11:36:05 +01:00
Oleksii Kriuchykhin
21c07371c9 Fix repository export to support file columns [SCI-2079] 2018-03-13 10:40:27 +01:00
mlorb
34f5c2c7ac fix validation in asset model and change formatted method in repository_asset_value model 2018-03-12 10:50:45 +01:00
mlorb
64e26e1c60 add file custom column type to db 2018-03-09 17:04:54 +01:00
Oleksii Kriuchykhin
e4d974aa58 Add uniqueness validation for SamplesTable [SCI-2148][SCI-2149] 2018-03-09 15:34:06 +01:00
zmagod
4f951f6679 adds unit specs for datatable service [fixes SCI-2068] 2018-03-09 14:22:00 +01:00
Oleksii Kriuchykhin
1765d83cd1 Refactor search to support repository list items [SCI-2108] 2018-03-09 11:05:43 +01:00
zmagod
26883af386 fix assigned ordering 2018-03-08 17:36:10 +01:00
zmagod
fb66131e29 setup endpoint for repository_rows paging/search 2018-03-06 16:32:39 +01:00
mz3944
bb21f6543c
Merge pull request #1004 from mz3944/mz-SCI-2011 
Wrapping up the permissions [SCI-2011]
 2018-03-06 07:10:40 +01:00
zmagod
fca01bd54f refactor repository export [fixes SCI-2025] 2018-03-05 15:54:04 +01:00
Zmago Devetak
50ccec5007
Merge pull request #1009 from ZmagoD/zd_SCI_2066 
add info modal for repository items [fixes SCI-2066]
 2018-03-05 12:49:29 +01:00
zmagod
0996745781 refactor repository import, adds RepositoryListType as an option and makes the import class more extensible [fixes SCI-2024] 2018-03-02 13:39:22 +01:00
mlorb
08439e7f58 sign up with linkedIn account 2018-02-28 18:12:21 +01:00
Matej Zrimšek
b8b9707c06 Fixed protocol and archive permission calls, fixed result permissions; module group managing is now also allowed on newly created groups; other permission call fixes and some refactoring. 2018-02-19 14:51:14 +01:00
Matej Zrimšek
321ddc2916 Grouped existing project permissions and used 'canaid' gem. 2018-02-14 13:09:45 +01:00
zmagod
36595d33f4 fix name scope 2018-02-12 09:09:56 +01:00
zmagod
d12f8403e4 add reference to repository column 2018-02-12 09:05:41 +01:00
zmagod
ae99c92516 follow @okriuchykhin 's suggestions 2018-02-09 16:28:21 +01:00
zmagod
557aeca049 refactor relations 2018-02-09 14:11:56 +01:00
zmagod
7c13c5a1f4 fixes typo, follows @okriuchykhin 's suggestions 2018-02-09 11:38:52 +01:00
zmagod
6b7ff11bcf setup models for repository list column [fixes SCI-2015] 2018-02-07 15:28:28 +01:00
Oleksii Kriuchykhin
16e1d072b9 Improve files handling in protocol clonning [SCI-2003] 2018-02-01 15:44:08 +01:00
mlorb
775b8b3201 fix bug with ajax error caused to the other user when deleting column in custom repository 2018-01-29 16:01:33 +01:00
zmagod
f8a3fca2db Merge branch 'master' of https://github.com/biosistemika/scinote-web into decoupling 2018-01-23 11:06:33 +01:00
Oleksii Kriuchykhin
819febb05b Remove skip_on_import from repository_cell [SCI-1939] 2018-01-17 12:54:32 +01:00
Oleksii Kriuchykhin
a64012237e Fix repository records import [SCI-1939] 2018-01-15 18:01:35 +01:00
Oleksii Kriuchykhin
2ddb0ea009 Improve XLSX parsing with Roo [SCI-1915] 2018-01-11 17:52:57 +01:00
zmagod
862b73cae7 Merge branch 'decoupling-settings-page' of https://github.com/biosistemika/scinote-web into zd_SCI_1866 2018-01-05 09:13:43 +01:00
okriuchykhin
e49ffb61d4
Merge pull request #914 from okriuchykhin/ok_SCI_1873 
Fix repositories [SCI-1873]
 2018-01-04 13:33:30 +01:00
Oleksii Kriuchykhin
66869fe4cf Fix canvas update [SCI-1871] 2017-12-20 11:44:11 +01:00
Oleksii Kriuchykhin
512ee07bde Fix repositories [SCI-1873] 2017-12-19 17:53:45 +01:00
Luka Murn
cf291bf887 Merge branch 'gilson-iot-rails4' 
Conflicts:
	Gemfile.lock
 2017-12-19 10:56:39 +01:00
zmagod
219ef3baf6 setup new pagination for activities 2017-12-14 14:02:40 +01:00
Oleksii Kriuchykhin
6256acdfea Rename notifications settings accessor [SCI-1864] 2017-12-07 13:59:33 +01:00
Zmago Devetak
027f4a5921
Merge pull request #890 from ZmagoD/zd_SCI_1651 
export and import RTE images
 2017-11-24 16:28:28 +01:00
Zmago Devetak
3cd7e6fdde
fix open method 2017-11-24 15:19:58 +01:00
mlorb
9e7b75a880
Merge pull request #892 from mlorb/ml-sci-1215_v2 
Make background gray for paperclip images [SCI-1215]
 2017-11-23 17:32:09 +01:00
Mojca Lorber
0ffe476a54 make background gray for paperclip images 2017-11-23 14:35:42 +01:00
Luka Murn
00fe267a2a Minor codestyle fixes 2017-11-23 11:33:39 +01:00
Mojca Lorber
fe5828fa97 add copying of TinyMce assets when cloning the protocol 2017-11-22 16:47:21 +01:00
zmagod
91fec89cab adds tiny_mce_assets to protocol export 2017-11-21 16:30:48 +01:00
Luka Murn
d715eb06ef Add team & project role-related helper functions to User model 
This will be required later once we start using Canaid.
 2017-11-16 15:50:30 +01:00
Oleksii Kriuchykhin
f202687291 Allow import of the sample with missing non mandatory fields [SCI-1819] 2017-11-15 16:40:14 +01:00
Oleksii Kriuchykhin
84f4aba213 Pull latest master into gilson-iot-rails4 2017-11-15 15:15:26 +01:00
Mojca Lorber
f75a2710d5 fix preview for images with transparent background 2017-11-13 18:03:14 +01:00
zmagod
e0b6683a44 create view directory per @Ducz0r 's request 2017-11-09 10:06:53 +01:00
zmagod
e0323a0a46 fixes failing tests 2017-10-27 09:35:39 +02:00
zmagod
3d22a5404d add scenic gem, teams datatables sql view 2017-10-26 16:59:00 +02:00
Luka Murn
82f982e983 Merge branch 'rails-5.1' into decoupling-settings-page 
Conflicts:
	Gemfile
	Gemfile.lock
 2017-10-23 10:59:10 +02:00
Luka Murn
6c2c5aff17 Additional fixes required by latest merge from master 2017-10-23 09:51:13 +02:00
Luka Murn
8254153bb9 Merge branch 'master' into rails-5.1 
Conflicts:
	Gemfile
	Gemfile.lock
	app/models/connection.rb
	app/models/experiment.rb
	app/models/my_module.rb
 2017-10-23 08:57:57 +02:00
okriuchykhin
8e90e041b9 Merge pull request #825 from okriuchykhin/ok_SCI_1665 
Optimize memory usage in samples/repositories import [SCI-1665]
 2017-10-17 17:26:00 +02:00
Oleksii Kriuchykhin
c8d2ae70fa Move duplicated code to service [SCI-1665] 2017-10-17 14:46:16 +02:00
zmagod
6fe48a07ae fix hound, add custom hook for webpacker:compile 2017-10-16 17:02:35 +02:00
zmagod
c5978f2d86 adds cucumber test for profile page [fixes SCI-1572] 2017-10-16 16:21:52 +02:00
Oleksii Kriuchykhin
d266034406 Use case insensitive sample types and groups in import [SCI-1689] 2017-10-13 17:15:51 +02:00
Oleksii Kriuchykhin
56f52ebfa7 Optimize memory usage in samples/repositories import [SCI-1665] 2017-10-12 14:43:25 +02:00
Oleksii Kriuchykhin
9a8e33c6d7 Small fixes [SCI-1642] 2017-10-11 17:24:31 +02:00
Oleksii Kriuchykhin
6820511ea0 Further canvas optimizations [SCI-1642] 2017-10-06 12:43:27 +02:00
Oleksii Kriuchykhin
b26b963e54 Optimize update canvas SQL and remove module group name [SCI-1642] 2017-10-05 16:19:25 +02:00
zmagod
c20f0c2d8a fixes user_controller specs, adds user model specs for settings 2017-10-05 15:53:05 +02:00
zmagod
a020e23286 follow suggestions of @Ducz0r 2017-10-05 13:56:56 +02:00
zmagod
cb4bacc372 refactor preferences page [fixes SCI-1564] 2017-09-28 16:53:51 +02:00
zmagod
c8c8afdd1d update react-bootstrap 2017-09-28 15:00:54 +02:00
zmagod
26b526d61b adds getter and setters for user settings 2017-09-27 14:38:52 +02:00
zmagod
e2aa0d7515 fixes user profile 2017-09-26 17:29:11 +02:00
Luka Murn
e078ae4f77 Merge branch 'rails-5.1' into decoupling-settings-page 2017-09-21 08:36:09 +02:00
Luka Murn
beae1b05d8 Merge branch 'master' into rails-5.1 
Conflicts:
	Gemfile
	Gemfile.lock
 2017-09-21 08:27:38 +02:00
Mojca Lorber
0e14420193 fix bugs with importing samples 2017-09-06 14:41:14 +02:00
zmagod
9c01ab414c refactor leave team 2017-09-01 17:10:43 +02:00
Oleksii Kriuchykhin
fc0e2d2172 Add validation for uid uniqness [GIOT-29] 2017-09-01 17:00:13 +02:00
Oleksii Kriuchykhin
c3fceb90df Backport API to Rails-4 [SCI-1579] 2017-08-30 13:30:41 +02:00
zmagod
478bd491ff added pagination and sorting to team tables 2017-08-28 17:05:09 +02:00
zmagod
db16da7bd6 adds custom query to fetch teams data 2017-08-25 16:07:37 +02:00
zmagod
c5e32c4ea0 Merge branch 'rails-5.1' of https://github.com/biosistemika/scinote-web into merge-rails-5.1-branch 2017-08-21 09:52:14 +02:00
Luka Murn
ec7b7ffe08 You are my sunshine, my only sunshine, 
You make me happy when skies are grey
You never know, Hound, how much I love you
Please don't take my Hound away
 2017-08-10 14:42:58 +02:00
Luka Murn
9227ea5854 Finish the user settings jsonb, also fix references throughout app 
Closes SCI-1475.
 2017-08-10 14:29:01 +02:00
Luka Murn
c62002381b Add default settings migration and concern 2017-08-10 11:30:57 +02:00
Zmago Devetak
4be39a8580 Merge pull request #762 from ZmagoD/zd_SCI_1493 
Copy navbar to React
 2017-08-07 14:07:55 +02:00
Luka Murn
ae5bccf709 Merge branch 'master' into rails-5.1 
Conflicts:
	Gemfile.lock
	app/datatables/repository_datatable.rb
	app/models/repository_cell.rb
 2017-08-07 08:45:53 +02:00
zmagod
c314bae28d add team switch js/controller 2017-08-03 16:03:15 +02:00
zmagod
b69ec22dfe fixes failing tests [fixes SCI-1470] 2017-07-28 10:14:50 +02:00
zmagod
416ab8eee3 Merge branch 'rails-5.1' of https://github.com/biosistemika/scinote-web into zd_SCI_1400 2017-07-26 16:20:09 +02:00
Oleksii Kriuchykhin
6a43483a2f Fix adding and editing repository items [SCI-1519] 2017-07-26 11:22:26 +02:00
Oleksii Kriuchykhin
efd03db6db Further samples import improvement [SCI-101] 2017-07-25 10:56:07 +02:00
Oleksii Kriuchykhin
67b0c78593 Improve samples import speed [SCI-101] 2017-07-24 17:33:13 +02:00
Oleksii Kriuchykhin
6d56e6b72e Remove redundant self [SCI-1487] 2017-07-20 11:51:42 +02:00
Oleksii Kriuchykhin
6c33b46f6a Improve import of repository records plus tsv file import fixes [SCI-1487] 2017-07-20 11:44:10 +02:00
Oleksii Kriuchykhin
ece27b2652 Fix importing files with empty header cells and error messages improvements [SCI-1484] 2017-07-18 14:54:35 +02:00
Nbernot
d746ae2549 Removes parentheses around if conditions 2017-07-11 13:33:47 +02:00
Luka Murn
9f60ece25f Merge branch 'master' into rails-5.1 
Conflicts:
	app/models/repository.rb
	app/models/repository_row.rb
	app/views/projects/index.html.erb
	app/views/shared/_secondary_navigation.html.erb
 2017-07-06 15:12:15 +02:00
zmagod
750c82a80f setup testing tools [fixes SCI-1400] 2017-07-06 09:07:05 +02:00
Nejc Bernot
803934e07d Changes the host for the download and redirect paths 2017-07-05 10:23:10 +02:00
Nejc Bernot
91fe7fe4ad Changes the completely NOT ruby code 2017-07-04 17:13:59 +02:00
Luka Murn
e3b9c1c644 Woops, almost forgot on this one 2017-07-04 15:00:14 +02:00
Luka Murn
8d68769d09 Hound is Love, Hound is Life 2017-07-04 14:47:58 +02:00
Luka Murn
91cddce8a6 Fixes DEPRECATION WARNING-s for Rails 5.1.2 
This just fixes the warning messages occured during click-through
of the application. I didn't systematically search code for all
potential problems (I couldn't find the list of all deprecations
anyway).

Closes SCI-1427.
 2017-07-04 14:35:51 +02:00
Nejc Bernot
bd9904adb3 Adds support for business servers 
If the WOPI_BUSINESS_USERS environmental variable is set and true, indicates to Office online that all users are business users when trying to view/edit files
 2017-07-04 14:27:43 +02:00
Zmago Devetak
5f4006fe4a Merge pull request #723 from ZmagoD/zd_SCI_1408 
Fixes bugs on canvas [fixes SCI-1408]
 2017-07-04 11:16:04 +02:00
okriuchykhin
75c887ce7d Merge pull request #721 from okriuchykhin/ok_SCI_1412 
Fix activities [SCI-1412]
 2017-07-04 10:59:08 +02:00
Oleksii Kriuchykhin
b234c07c13 Fix datatables [SCI-1409] 2017-07-03 15:33:50 +02:00
zmagod
311270ff49 refactor 2017-07-03 15:32:02 +02:00
zmagod
fd13921720 fixes repeat tutorial [fixes SCI-1410] 2017-06-29 11:00:50 +02:00
zmagod
bef5a085c4 Fixes bugs on canvas [fixes SCI-1408] 2017-06-29 10:29:41 +02:00
Oleksii Kriuchykhin
e474cda03a Fix activities [SCI-1412] 2017-06-28 16:49:50 +02:00
Zmago Devetak
502eb5c211 fixes tabs 2017-06-28 15:40:15 +02:00
zmagod
d8a3fdea20 fixes hound 2017-06-28 15:29:10 +02:00
zmagod
525c9770ac fixes experiment page [fixes SCI-1395] 2017-06-28 15:21:32 +02:00
zmagod
71aa05bb0e refactor 2017-06-27 14:58:49 +02:00
okriuchykhin
d126391940 Merge pull request #710 from okriuchykhin/ok_SCI_1356 
Add global search in custom repositories [SCI-1356]
 2017-06-27 13:41:53 +02:00
Oleksii Kriuchykhin
f2f57de264 Fix changing protocol ownership logic when removing user from the team [SCI-1415] 2017-06-26 15:30:18 +02:00
Oleksii Kriuchykhin
e038bc58fa Add global search in custom repositories [SCI-1356] 2017-06-23 16:12:56 +02:00
zmagod
819f47b450 setup sciNote for Rails 5.1 2017-06-23 15:19:08 +02:00
zmagod
703be13fb0 removes imported repository row if the row value is not valid [fixes SCI-1393] 2017-06-22 15:21:36 +02:00
zmagod
28129ebb73 refactor 2017-06-21 17:39:20 +02:00
zmagod
bad52ceff1 Merge branch 'master' of https://github.com/biosistemika/scinote-web into zd_SCI_1336 2017-06-21 15:56:07 +02:00
zmagod
18fd5b00ba fix hound 2017-06-21 15:01:55 +02:00
zmagod
f66fb49b56 adds import records to repositories [fixes SCI-1336] 2017-06-21 14:45:50 +02:00
zmagod
f64e1ac713 fix locales 2017-06-21 09:31:39 +02:00
Matej Zrimšek
6c7987681c Updating repository table state of every user belonging to the team of the repository, when custom column is removed or added. [SCI-1384] 2017-06-20 14:52:41 +02:00
zmagod
70fa681519 split the import service 2017-06-19 14:05:37 +02:00
Zmago Devetak
21577cd0e9 Merge pull request #664 from ZmagoD/zd_SCI_1315 
removes the delete function of uncompleted steps [fixes SCI-1315]
 2017-06-13 09:32:26 +02:00
zmagod
a865253a2e first run 2017-06-13 08:10:10 +02:00
Matej Zrimšek
e3db79b3cc Added repository permissions check when exporting repository records. Minor repositories refactoring and code style fixing. [SCI-1275] 2017-06-12 17:49:42 +02:00
Matej Zrimšek
4ea8972a6c Fixed rebasing mistake. [SCI-1275] 2017-06-09 19:48:20 +02:00
rekonder
ede744849b Export repository [aj-SCI-1275] 2017-06-09 19:44:28 +02:00
Luka Murn
e26337d5ee Merge pull request #671 from biosistemika/custom-repositories 
Merge custom-repositories into master
 2017-06-09 18:46:47 +02:00
zmagod
5f8606c9c5 removes the delete function of uncompleted steps [fixes SCI-1315] 2017-06-08 14:03:06 +02:00
Luka Murn
810599bef2 Fix en.yml localization bug 2017-06-08 13:36:37 +02:00
Luka Murn
2ab31aba2f Merge pull request #660 from Ducz0r/lm-sci-1270 
Copy repository functionality [SCI-1270]
 2017-06-08 11:45:57 +02:00
Luka Murn
61eb52f86f Implement GUI for copying repositories 
Closes SCI.1270.
 2017-06-07 19:11:25 +02:00
Luka Murn
b94d2c5c03 Implement 'copy' method on Repository object 2017-06-07 18:28:07 +02:00
Luka Murn
42f7b4f68d Hound is love, Hound is life 2017-06-07 18:22:15 +02:00
Luka Murn
9e45d197df Change some stuff for repos to work, fix some bugs 
Closes SCI-1279.
 2017-06-07 18:07:49 +02:00
Luka Murn
02dd6636ba Allow saving & editing of reports with repository elements 
Closes SCI-1279.
 2017-06-07 16:55:00 +02:00
Luka Murn
b5f6d1da94 Allow custom repositories to be added to reports 2017-06-07 16:54:32 +02:00
Luka Murn
bb20d2661f Add association between repository rows & my modules 2017-06-07 16:54:32 +02:00
Oleksii Kriuchykhin
ad8dd6d740 PR fixes [SCI-1274] 2017-06-07 15:23:25 +02:00
Oleksii Kriuchykhin
8b1190060e Add custom repository table [SCI-1274] 2017-06-07 15:23:25 +02:00
Matej Zrimšek
5aba15e220 Made repository names case insensitive. [fix 1269] 2017-06-05 10:38:04 +02:00
zmagod
b527afd12b generates samples csv file in background job [fixes SCI-1278] 2017-05-29 14:42:55 +02:00
Oleksii Kriuchykhin
e99e3edb7b Add repositories dropdown to task navigation [SCI-1273] 2017-05-18 14:21:00 +02:00
Oleksii Kriuchykhin
85e81e9ea2 Improve repository models and migration [SCI-1267] 2017-05-17 10:04:07 +02:00
Oleksii Kriuchykhin
0dc0c7d096 Add validation of text_value length [SCI-1267] 2017-05-16 15:57:21 +02:00
Oleksii Kriuchykhin
72a651c7de Add migrations and models for custom repositories [SCI-1267] 2017-05-16 15:27:36 +02:00
okriuchykhin
8e523782d9 Merge pull request #619 from okriuchykhin/ok_SCI_617 
Fixes error when cloning experiments with long names [SCI-617]
 2017-05-12 16:53:38 +02:00
okriuchykhin
a8bbc3c3ba Merge pull request #615 from okriuchykhin/ok_SCI_1008 
Fix task and step ordering in reports [SCI-1008]
 2017-05-12 16:44:57 +02:00
Oleksii Kriuchykhin
79efb34191 Fixes error when clonning experiments with long names [SCI-617] 2017-05-12 11:07:11 +02:00
Oleksii Kriuchykhin
bb8c7c342c Add additional info to samples info modal [SCI-960] 2017-05-11 22:20:06 +02:00
Oleksii Kriuchykhin
5d55720aad Fix steps ordering in reports [SCI-1008] 2017-05-11 15:56:33 +02:00
Zmago Devetak
9911c0d148 Merge pull request #613 from ZmagoD/zd_SCI_1241_v3 
replace all ActionController::Base.helpers.sanitize calls with custom…
 2017-05-11 14:30:26 +02:00
zmagod
80a0af8c9f replace all ActionController::Base.helpers.sanitize calls with custom sanitize_input method [fixes SCI-1241] 2017-05-11 11:36:47 +02:00
Oleksii Kriuchykhin
a5926726ce Add notifications counter badge to project card [SCI-1253] 2017-05-10 17:28:37 +02:00
zmagod
2081e0a94b Merge branch 'master' of https://github.com/biosistemika/scinote-web into release-1.10.1 2017-05-10 15:14:17 +02:00
Zmago Devetak
ff0f85fce8 Merge pull request #592 from ZmagoD/zd_SCI_160 
removes TempFile after 7 days [fixes SCI-160]
 2017-05-10 09:32:18 +02:00
zmagod
04ee24d553 refactor 2017-05-09 14:05:21 +02:00
zmagod
2d69896897 fixes pdf export and image size [fixes SCI-1247] 2017-05-09 13:59:59 +02:00
okriuchykhin
ccc640f2bc Merge pull request #593 from okriuchykhin/ok_SCI_1158 
Add advanced search options [SCI-1158]
 2017-05-09 10:23:34 +02:00
Oleksii Kriuchykhin
bd5a48b9c8 Improve code style [SCI-1158] 2017-05-08 18:00:14 +02:00
Zmago Devetak
4b816f5322 Merge pull request #568 from ZmagoD/zd_SCI_1119 
Add images to fields with rich text formatting
 2017-05-08 13:06:58 +02:00
Oleksii Kriuchykhin
a3f847a232 Fix hound [SCI-1158] 2017-05-08 10:22:54 +02:00
Oleksii Kriuchykhin
0ee7e11620 Add advanced search options [SCI-1158] 2017-05-05 16:41:23 +02:00
zmagod
f079a097c5 removes TempFile after 7 days [fixes SCI-160] 2017-05-05 14:54:22 +02:00
zmagod
8d0c22327b adds asc order to checklists [fixes SCI-1228] 2017-05-04 15:17:34 +02:00
zmagod
acc5594f1b add popup for approval to complete the Task [fixes SCI-1200] 2017-05-04 12:41:22 +02:00
okriuchykhin
5ec41c0d0a Merge pull request #576 from okriuchykhin/ok_SCI_763 
Add additional sanitization to search parameters in datatables [SCI-763]
 2017-04-26 13:44:15 +02:00
zmagod
0e383109a1 refactor query 2017-04-26 13:32:03 +02:00
Oleksii Kriuchykhin
9055894d07 Add additional sanitization to search parameters in datatables [SCI-763] 2017-04-25 17:37:42 +02:00
zmagod
615bbb9967 make search for users case insensitive [fixes SCI-1192] 2017-04-25 15:33:51 +02:00
Luka Murn
92159b734f Merge pull request #559 from Ducz0r/lm-sci-1175-fix 
Fix encoding when cloning tables [SCI-1175]
 2017-04-25 14:38:34 +02:00
zmagod
ed24448817 adds relation to team, adds rake task to delete obsolete images [fixes SCI-1203] 2017-04-25 14:24:05 +02:00
zmagod
1fefeee3d1 adds team space related methods 2017-04-25 13:44:31 +02:00
zmagod
66f43803c0 refactor, fix user annotation bug 2017-04-24 16:22:25 +02:00
zmagod
55c8c498e2 add image upload functionality to result text 2017-04-24 12:28:27 +02:00
zmagod
550f563666 working version for steps first run 2017-04-21 16:09:04 +02:00
Mojca Lorber
3aa1225e16 fix hound 2017-04-20 18:14:12 +02:00
Mojca Lorber
0bae4657f6 add experiment level to user smart annotation notification 2017-04-20 13:21:02 +02:00
Mojca Lorber
b1e939e715 add experiment to activities 2017-04-20 13:16:11 +02:00
Mojca Lorber
c13b8ab270 styling 2017-04-20 13:16:11 +02:00
Mojca Lorber
1606e2163c add experiment level to notifications 2017-04-20 13:16:11 +02:00
Matej Zrimšek
314e8fcbd2 Added :inverse_of reference for all specific comment models. [fixes SCI-1207] 2017-04-19 23:38:23 +02:00
zmagod
0757563d02 adds step tiny_mce asset relation 2017-04-19 17:22:57 +02:00
Luka Murn
9479b65140 Hopefully fixes the encoding issues with audit trails 
Closes SCI-1175.
 2017-04-19 08:35:04 +02:00
Luka Murn
6a7e383316 Please the Hound 2017-04-18 15:38:11 +02:00
Zmago Devetak
e1a30cc17c Merge pull request #558 from ZmagoD/zd_SCI_1192 
fixes broken users search method for smart annotation [fixes SCI-1192]
 2017-04-14 15:38:33 +02:00
Luka Murn
9c28608fbf Fix encoding when cloning tables 
Closes SCI-1175.
 2017-04-13 17:00:27 +02:00
zmagod
9ee971c24b fixes broken users search method for smart annotation [fixes SCI-1192] 2017-04-13 16:14:12 +02:00
Zmago Devetak
40af0df882 Merge pull request #551 from ZmagoD/zd_SCI_1189 
fixes the user_name field in csv export [fixes SCI-1189]
 2017-04-13 14:36:44 +02:00
zmagod
a6183af63d fix method_missing again 2017-04-13 14:34:58 +02:00
zmagod
0534bce1ed adds super in method_missing 2017-04-13 14:03:56 +02:00
zmagod
241af0620a fixes hound alerts 2017-04-13 13:27:43 +02:00
zmagod
b6daf2648b refactor zip_export 2017-04-13 13:01:05 +02:00
okriuchykhin
0fe84c4e24 Merge pull request #550 from okriuchykhin/ok_SCI_1157 
Improve speed of search [SCI-1157]
 2017-04-12 13:11:26 +02:00
zmagod
f4fdb840d8 fixes the user_name field in csv export [fixes SCI-1189] 2017-04-12 09:05:54 +02:00
Oleksii Kriuchykhin
07d658ab82 Improve speed of search [SCI-1157] 2017-04-11 14:55:44 +02:00
Matej Zrimšek
1447a34dc7 Files didn't get deleted in previous commit. [fixes SCI-1150] 2017-04-06 16:59:34 +02:00
Matej Zrimšek
e72184d10d Fixed so that file deletion callbacks are triggered (and hence audit trails for this is generated). [fixes SCI-1150] 2017-04-06 11:34:03 +02:00
zmagod
e1ee53eeb5 generates query in background worker 2017-04-03 13:37:54 +02:00
Oleksii Kriuchykhin
42ccefe2ce Remove logs table and old unused logging code [SCI-1127] 2017-03-30 11:47:57 +02:00
zmagod
0996c14449 Merge branch 'master' of https://github.com/biosistemika/scinote-web into zd_SCI_765 2017-03-27 10:41:58 +02:00
zmagod
239a44c26b change send to public_send 2017-03-24 16:25:50 +01:00
zmagod
4635a3320d Merge branch 'master' of https://github.com/biosistemika/scinote-web into zd_SCI_1003_add_extends 2017-03-24 16:09:28 +01:00
zmagod
b352ef1600 removed unneeded method 2017-03-24 12:53:33 +01:00
zmagod
023b3213e8 fixes email link [fixes SCI-765] 2017-03-24 12:10:07 +01:00
zmagod
94732c6d18 adds delayed zip generator 2017-03-23 15:45:02 +01:00
Oleksii Kriuchykhin
2edebb282a Add team_id field to assets and tables [SCI-1046] 2017-03-23 10:36:55 +01:00
zmagod
4385c68f5f adds zip_export utility first run 2017-03-21 16:15:11 +01:00
zmagod
856a4611c6 Merge branch 'master' of https://github.com/biosistemika/scinote-web into zd_SCI_1003_add_extends 2017-03-14 15:58:08 +01:00
zmagod
0c2523beca Merge branch 'master' of https://github.com/biosistemika/scinote-web into office_integration 2017-03-10 16:21:43 +01:00
okriuchykhin
2a33391f4b Merge pull request #511 from okriuchykhin/ok_SCI_1090 
Refactoring of the comments using STI [SCI-1090]
 2017-03-10 10:50:43 +01:00
zmagod
1d42d46c02 fixes bug with step comments 2017-03-09 16:02:52 +01:00
zmagod
9939d8df06 refactor 2017-03-09 10:51:54 +01:00