# frozen_string_literal: true class MyModule < ApplicationRecord SEARCHABLE_ATTRIBUTES = %i(name description).freeze include ArchivableModel include SearchableModel include SearchableByNameModel include TinyMceImages include PermissionCheckableModel include Assignable enum state: Extends::TASKS_STATES before_validation :archiving_and_restoring_extras, on: :update, if: :archived_changed? before_save -> { report_elements.destroy_all }, if: -> { !new_record? && experiment_id_changed? } around_save :exec_status_consequences, if: :my_module_status_id_changed? before_create :create_blank_protocol before_create :assign_default_status_flow after_save -> { experiment.workflowimg.purge }, if: -> { (saved_changes.keys & %w(x y experiment_id my_module_group_id input_id output_id archived)).any? } auto_strip_attributes :name, :description, nullify: false, if: proc { |mm| mm.name_changed? || mm.description_changed? } validates :name, length: { minimum: Constants::NAME_MIN_LENGTH, maximum: Constants::NAME_MAX_LENGTH } validates :description, length: { maximum: Constants::RICH_TEXT_MAX_LENGTH } validates :x, :y, :workflow_order, presence: true validates :experiment, presence: true validates :my_module_group, presence: true, if: proc { |mm| !mm.my_module_group_id.nil? } validate :coordinates_uniqueness_check, if: :active? validates :completed_on, presence: true, if: proc { |mm| mm.completed? } validate :check_status, if: :my_module_status_id_changed? validate :check_status_conditions, if: :my_module_status_id_changed? validate :check_status_implications belongs_to :created_by, foreign_key: 'created_by_id', class_name: 'User', optional: true belongs_to :last_modified_by, foreign_key: 'last_modified_by_id', class_name: 'User', optional: true belongs_to :archived_by, foreign_key: 'archived_by_id', class_name: 'User', optional: true belongs_to :restored_by, foreign_key: 'restored_by_id', class_name: 'User', optional: true belongs_to :experiment, inverse_of: :my_modules, touch: true belongs_to :my_module_group, inverse_of: :my_modules, optional: true belongs_to :my_module_status, optional: true belongs_to :changing_from_my_module_status, optional: true, class_name: 'MyModuleStatus' delegate :my_module_status_flow, to: :my_module_status, allow_nil: true has_many :results, inverse_of: :my_module, dependent: :destroy has_many :my_module_tags, inverse_of: :my_module, dependent: :destroy has_many :tags, through: :my_module_tags has_many :task_comments, foreign_key: :associated_id, dependent: :destroy has_many :inputs, class_name: 'Connection', foreign_key: 'input_id', inverse_of: :to, dependent: :destroy has_many :outputs, class_name: 'Connection', foreign_key: 'output_id', inverse_of: :from, dependent: :destroy has_many :my_modules, through: :outputs, source: :to, class_name: 'MyModule' has_many :my_module_antecessors, through: :inputs, source: :from, class_name: 'MyModule' has_many :my_module_repository_rows, inverse_of: :my_module, dependent: :destroy has_many :repository_rows, through: :my_module_repository_rows has_many :repository_snapshots, dependent: :destroy, inverse_of: :my_module has_many :user_my_modules, inverse_of: :my_module, dependent: :destroy has_many :users, through: :user_assignments has_many :designated_users, through: :user_my_modules, source: :user has_many :report_elements, inverse_of: :my_module, dependent: :destroy has_many :protocols, inverse_of: :my_module, dependent: :destroy # Associations for old activity type has_many :activities, inverse_of: :my_module scope :overdue, -> { where('my_modules.due_date < ?', Time.current.utc) } scope :without_group, -> { active.where(my_module_group: nil) } scope :one_day_prior, (lambda do where('my_modules.due_date > ? AND my_modules.due_date < ?', Time.current.utc, Time.current.utc + 1.day) end) scope :workflow_ordered, -> { order(workflow_order: :asc) } scope :uncomplete, -> { where(state: 'uncompleted') } scope :my_module_search_scope, lambda { |experiment_ids, user| joins(:user_assignments).where( experiment: experiment_ids, user_assignments: { user: user } ).distinct } # A module takes this much space in canvas (x, y) in database WIDTH = 30 HEIGHT = 14 def self.search( user, include_archived, query = nil, page = 1, current_team = nil, options = {} ) my_module_scope = my_module_search_scope( Experiment .search(user, include_archived, nil, Constants::SEARCH_NO_LIMIT) .pluck(:id), user ) if current_team new_query = my_module_search_scope( Experiment .search(user, include_archived, nil, 1, current_team) .select('id'), user ).where_attributes_like(SEARCHABLE_ATTRIBUTES, query, options) if include_archived return new_query else return new_query.where('my_modules.archived = ?', false) end elsif include_archived new_query = my_module_scope.where_attributes_like(SEARCHABLE_ATTRIBUTES, query, options) else new_query = my_module_scope.where('my_modules.archived = ?', false) .where_attributes_like(SEARCHABLE_ATTRIBUTES, query, options) end # Show all results if needed if page == Constants::SEARCH_NO_LIMIT new_query else new_query .limit(Constants::SEARCH_LIMIT) .offset((page - 1) * Constants::SEARCH_LIMIT) end end def self.viewable_by_user(user, teams) left_outer_joins(user_assignments: :user_role) .where(experiment: Experiment.viewable_by_user(user, teams)) .where(user_assignments: { user: user }) .where('user_roles.permissions @> ARRAY[?]::varchar[]', %w[task_read]) end def navigable? !experiment.archived? && experiment.navigable? end def archived_branch? archived? || experiment.archived_branch? end def repository_rows_count(repository) my_module_repository_rows.joins(repository_row: :repository) .where('repositories.id': repository.id) .count end def assigned_repositories team = experiment.project.team Repository.accessible_by_teams(team) .joins(repository_rows: :my_module_repository_rows) .where(my_module_repository_rows: { my_module_id: id }) .group(:id) end def live_and_snapshot_repositories_list snapshots = repository_snapshots.left_outer_joins(:original_repository) selected_snapshots = snapshots.where(selected: true) .or(snapshots.where(original_repositories_repositories: { id: nil })) .or(snapshots.where.not(parent_id: assigned_repositories.select(:id))) .select('DISTINCT ON ("repositories"."parent_id") "repositories".*') .select('COUNT(repository_rows.id) AS assigned_rows_count') .joins(:repository_rows) .group(:parent_id, :id) .order(:parent_id, updated_at: :desc) live_repositories = assigned_repositories .select('repositories.*, COUNT(DISTINCT repository_rows.id) AS assigned_rows_count') .where.not(id: repository_snapshots.where(selected: true).select(:parent_id)) (live_repositories + selected_snapshots).sort_by { |r| r.name.downcase } end def update_report_repository_references(repository) ids = if repository.is_a?(Repository) RepositorySnapshot.where(parent_id: repository.id).pluck(:id) else Repository.where(id: repository.parent_id).pluck(:id) + RepositorySnapshot.where(parent_id: repository.parent_id).pluck(:id) end report_elements.where(repository_id: ids).update(repository: repository) end def undesignated_users User.joins(:user_assignments) .joins( "LEFT OUTER JOIN user_my_modules ON user_my_modules.user_id = users.id "\ "AND user_my_modules.my_module_id = #{id}" ) .where(user_assignments: { assignable: self }) .where(user_my_modules: { id: nil }) .distinct end def unassigned_tags Tag.find_by_sql( "SELECT DISTINCT tags.id, tags.name, tags.color FROM tags " + "INNER JOIN experiments ON experiments.project_id = tags.project_id " + "WHERE experiments.id = #{experiment_id.to_s} AND tags.id NOT IN " + "(SELECT DISTINCT tag_id FROM my_module_tags WHERE my_module_tags.my_module_id = #{id.to_s})" ) end def last_activities(count = Constants::ACTIVITY_AND_NOTIF_SEARCH_LIMIT) Activity.where(my_module_id: id).order(:created_at).last(count) end # Get module comments ordered by created_at time. Results are paginated # using last comment id and per_page parameters. def last_comments(last_id = 1, per_page = Constants::COMMENTS_SEARCH_LIMIT) last_id = Constants::INFINITY if last_id <= 1 comments = TaskComment.joins(:my_module) .where(my_modules: { id: id }) .where('comments.id < ?', last_id) .order(created_at: :desc) .limit(per_page) TaskComment.from(comments, :comments).order(created_at: :asc) end def last_activities(last_id = 1, count = Constants::ACTIVITY_AND_NOTIF_SEARCH_LIMIT) last_id = Constants::INFINITY if last_id <= 1 Activity.joins(:my_module) .where(my_module_id: id) .where('activities.id < ?', last_id) .order(created_at: :desc) .limit(count) .uniq end def protocol # Temporary function (until we fully support # multiple protocols per module) protocols.count > 0 ? protocols.first : nil end def is_overdue?(datetime = DateTime.current) due_date.present? && datetime.utc > due_date.utc end def overdue_for_days(datetime = DateTime.current) if due_date.blank? || due_date.utc > datetime.utc 0 else ((datetime.utc.to_i - due_date.utc.to_i) / 1.day.to_f).ceil end end def is_one_day_prior?(datetime = DateTime.current) is_due_in?(datetime, 1.day) end def is_due_in?(datetime, diff) due_date.present? && datetime.utc < due_date.utc && datetime.utc > (due_date.utc - diff) end def space_taken st = 0 protocol.steps.find_each do |step| st += step.space_taken end results .includes(:result_asset) .find_each do |result| st += result.space_taken end st end def archived_results results .select('results.*') .select('ra.id AS result_asset_id') .select('rt.id AS result_table_id') .select('rx.id AS result_text_id') .joins('LEFT JOIN result_assets AS ra ON ra.result_id = results.id') .joins('LEFT JOIN result_tables AS rt ON rt.result_id = results.id') .joins('LEFT JOIN result_texts AS rx ON rx.result_id = results.id') .where(:archived => true) end # Treat this module as root, get all modules of that subtree def downstream_modules final = [] modules = [self] until modules.empty? my_module = modules.shift final << my_module unless final.include?(my_module) modules.push(*my_module.my_modules) end final end # Treat this module as inversed root, get all modules of that inversed subtree def upstream_modules final = [] modules = [self] until modules.empty? my_module = modules.shift final << my_module unless final.include?(my_module) modules.push(*my_module.my_module_antecessors) end final end # Generate the repository rows belonging to this module # in JSON form, suitable for display in handsontable.js def repository_json_hot(repository, order) data = [] rows = repository.assigned_rows(self).includes(:created_by).order(created_at: order) rows.find_each do |row| row_json = [] row_json << row.code row_json << (row.archived ? "#{row.name} [#{I18n.t('general.archived')}]" : row.name) row_json << I18n.l(row.created_at, format: :full) row_json << row.created_by.full_name data << row_json end # Prepare column headers headers = [ I18n.t('repositories.table.id'), I18n.t('repositories.table.row_name'), I18n.t('repositories.table.added_on'), I18n.t('repositories.table.added_by') ] { data: data, headers: headers } end def repository_docx_json(repository) headers = [ I18n.t('repositories.table.id'), I18n.t('repositories.table.row_name'), I18n.t('repositories.table.added_on'), I18n.t('repositories.table.added_by') ] custom_columns = [] return false unless repository repository.repository_columns.order(:id).each do |column| headers.push(column.name) custom_columns.push(column.id) end records = repository.assigned_rows(self) .select(:id, :name, :created_at, :created_by_id, :repository_id, :parent_id, :archived) { headers: headers, rows: records, custom_columns: custom_columns } end def deep_clone(current_user) deep_clone_to_experiment(current_user, experiment) end def deep_clone_to_experiment(current_user, experiment_dest) # Copy the module clone = MyModule.new( name: name, experiment: experiment_dest, description: description, x: x, y: y, created_by: created_by ) # set new position if cloning in the same experiment clone.attributes = get_new_position if clone.experiment == experiment clone.save! clone.assign_user(current_user) # Remove the automatically generated protocol, # & clone the protocol instead clone.protocol.destroy clone.reload # Update the cloned protocol if neccesary clone_tinymce_assets(clone, clone.experiment.project.team) clone.protocols << protocol.deep_clone_my_module(self, current_user) clone.reload # fixes linked protocols clone.protocols.each do |protocol| next unless protocol.linked? protocol.updated_at = protocol.parent_updated_at protocol.save end clone end # Find an empty position for the restored module. It's # basically a first empty row with empty space inside x=[0, 32). def get_new_position return { x: 0, y: 0 } if experiment.blank? # Get all modules position that overlap with first column, [0, WIDTH) and # sort them by y coordinate. positions = experiment.my_modules.active.collect { |m| [m.x, m.y] } .select { |x, _| x >= 0 && x < WIDTH } .sort_by { |_, y| y } return { x: 0, y: 0 } if positions.empty? || positions.first[1] >= HEIGHT # It looks we'll have to find a gap between the modules if it exists (at # least 2*HEIGHT wide ind = positions.each_cons(2).map { |f, s| s[1] - f[1] } .index { |y| y >= 2 * HEIGHT } return { x: 0, y: positions[ind][1] + HEIGHT } if ind # We lucked out, no gaps, therefore we need to add it after the last element { x: 0, y: positions.last[1] + HEIGHT } end def assign_user(user, assigned_by = nil) user_my_modules.create( assigned_by: assigned_by || user, user: user ) Activities::CreateActivityService .call(activity_type: :assign_user_to_module, owner: assigned_by || user, team: experiment.project.team, project: experiment.project, subject: self, message_items: { my_module: id, user_target: user.id }) end def comments task_comments end def permission_parent experiment end private def create_blank_protocol protocols << Protocol.new_blank_for_module(self) end def coordinates_uniqueness_check if experiment && experiment.my_modules.active.where(x: x, y: y).where.not(id: id).any? errors.add(:position, I18n.t('activerecord.errors.models.my_module.attributes.position.not_unique')) end end def assign_default_status_flow return if my_module_status.present? || MyModuleStatusFlow.global.blank? self.my_module_status = MyModuleStatusFlow.global.first.initial_status end def check_status_conditions return if my_module_status.blank? my_module_status.my_module_status_conditions.each do |condition| condition.call(self) end end def check_status_implications return if my_module_status.blank? my_module_status.my_module_status_implications.each do |implication| implication.call(self) end end def check_status return unless my_module_status_id_was original_status = MyModuleStatus.find_by(id: my_module_status_id_was) unless my_module_status && [original_status.next_status, original_status.previous_status].include?(my_module_status) errors.add(:my_module_status_id, I18n.t('activerecord.errors.models.my_module.attributes.my_module_status_id.not_correct_order')) end end def exec_status_consequences return if my_module_status.blank? || status_changing self.changing_from_my_module_status_id = my_module_status_id_was if my_module_status_id_was.present? self.status_changing = true status_changing_direction = my_module_status.previous_status_id == my_module_status_id_was ? :forward : :backward yield if my_module_status.my_module_status_consequences.any?(&:runs_in_background?) MyModuleStatusConsequencesJob.perform_later( self, my_module_status.my_module_status_consequences.to_a, status_changing_direction ) else my_module_status.my_module_status_consequences.each do |consequence| consequence.public_send(status_changing_direction, self) end update!(status_changing: false) end end def archiving_and_restoring_extras if archived? # Removes connections with other modules self.x = 0 self.y = 0 # Remove association with module group. self.my_module_group = nil # Remove all connection between modules. Connection.where(input_id: id).destroy_all Connection.where(output_id: id).destroy_all else # Calculate new module position new_pos = get_new_position self.x = new_pos[:x] self.y = new_pos[:y] end end end