# frozen_string_literal: true class ExperimentsController < ApplicationController include SampleActions include TeamsHelper include InputSanitizeHelper include ActionView::Helpers::TextHelper include ApplicationHelper include Rails.application.routes.url_helpers before_action :set_experiment, except: %i(new create) before_action :set_project, only: %i(new create samples_index samples module_archive clone_modal move_modal delete_samples) before_action :load_projects_tree, only: %i(canvas samples module_archive) before_action :check_view_permissions, only: %i(canvas module_archive) before_action :check_manage_permissions, only: :edit before_action :check_archive_permissions, only: :archive before_action :check_clone_permissions, only: %i(clone_modal clone) before_action :check_move_permissions, only: %i(move_modal move) before_action :set_inline_name_editing, only: %i(canvas module_archive) layout 'fluid'.freeze def new @experiment = Experiment.new respond_to do |format| format.json do render json: { html: render_to_string( partial: 'new_modal.html.erb' ) } end end end def create @experiment = Experiment.new(experiment_params) @experiment.created_by = current_user @experiment.last_modified_by = current_user @experiment.project = @project if @experiment.save experiment_annotation_notification log_activity(:create_experiment) flash[:success] = t('experiments.create.success_flash', experiment: @experiment.name) respond_to do |format| format.json do render json: { path: canvas_experiment_url(@experiment) }, status: :ok end end else respond_to do |format| format.json do render json: @experiment.errors, status: :unprocessable_entity end end end end def canvas @project = @experiment.project @active_modules = @experiment.active_modules .includes(:tags, :inputs, :outputs) current_team_switch(@project.team) end def edit respond_to do |format| format.json do render json: { html: render_to_string( partial: 'edit_modal.html.erb' ) } end end end def update render_403 && return unless if experiment_params[:archived] == 'false' can_restore_experiment?(@experiment) else can_manage_experiment?(@experiment) end old_text = @experiment.description @experiment.assign_attributes(experiment_params) @experiment.last_modified_by = current_user name_changed = @experiment.name_changed? description_changed = @experiment.description_changed? if @experiment.save experiment_annotation_notification(old_text) if old_text activity_type = if experiment_params[:archived] == 'false' :restore_experiment elsif name_changed && !description_changed :rename_experiment else :edit_experiment end log_activity(activity_type) respond_to do |format| format.json do render json: {}, status: :ok end format.html do flash[:success] = t('experiments.update.success_flash', experiment: @experiment.name) redirect_to project_path(@experiment.project) end end else respond_to do |format| format.json do render json: @experiment.errors, status: :unprocessable_entity end format.html do flash[:alert] = t('experiments.update.error_flash') redirect_back(fallback_location: root_path) end end end end def archive @experiment.archived = true @experiment.archived_by = current_user @experiment.archived_on = DateTime.now if @experiment.save log_activity(:archive_experiment) flash[:success] = t('experiments.archive.success_flash', experiment: @experiment.name) redirect_to project_path(@experiment.project) else flash[:alert] = t('experiments.archive.error_flash') redirect_back(fallback_location: root_path) end end # GET: clone_modal_experiment_path(id) def clone_modal @projects = @experiment.projects_with_role_above_user(current_user) respond_to do |format| format.json do render json: { html: render_to_string( partial: 'clone_modal.html.erb' ) } end end end # POST: clone_experiment(id) def clone service = Experiments::CopyExperimentAsTemplateService .call(experiment_id: @experiment.id, project_id: move_experiment_param, user_id: current_user.id) if service.succeed? flash[:success] = t('experiments.clone.success_flash', experiment: @experiment.name) redirect_to canvas_experiment_path(service.cloned_experiment) else flash[:error] = t('experiments.clone.error_flash', experiment: @experiment.name) redirect_to project_path(@experiment.project) end end # GET: move_modal_experiment_path(id) def move_modal @projects = @experiment.moveable_projects(current_user) respond_to do |format| format.json do render json: { html: render_to_string( partial: 'move_modal.html.erb' ) } end end end # POST: move_experiment(id) def move service = Experiments::MoveToProjectService .call(experiment_id: @experiment.id, project_id: move_experiment_param, user_id: current_user.id) if service.succeed? flash[:success] = t('experiments.move.success_flash', experiment: @experiment.name) path = canvas_experiment_url(@experiment) status = :ok else message = t('experiments.move.error_flash', experiment: escape_input(@experiment.name)) status = :unprocessable_entity end render json: { message: message, path: path }, status: status end def module_archive end def samples @samples_index_link = samples_index_experiment_path(@experiment, format: :json) @team = @experiment.project.team end def samples_index @team = @experiment.project.team respond_to do |format| format.html format.json do render json: ::SampleDatatable.new(view_context, @team, nil, nil, @experiment, current_user) end end end def updated_img if @experiment.workflowimg.attached? && !@experiment.workflowimg_exists? @experiment.workflowimg.purge @experiment.generate_workflow_img end respond_to do |format| format.json do if @experiment.workflowimg.attached? render json: {}, status: 200 else render json: {}, status: 404 end end end end def fetch_workflow_img respond_to do |format| format.json do render json: { workflowimg: render_to_string( partial: 'projects/show/workflow_img.html.erb' ) } end end end private def set_experiment @experiment = Experiment.find_by_id(params[:id]) render_404 unless @experiment end def set_project @project = Project.find_by_id(params[:project_id]) || @experiment.project render_404 unless @project end def experiment_params params.require(:experiment).permit(:name, :description, :archived) end def move_experiment_param params.require(:experiment).require(:project_id) end def load_projects_tree # Switch to correct team current_team_switch(@experiment.project.team) unless @experiment.project.nil? @projects_tree = current_user.projects_tree(current_team, 'atoz') end def check_view_permissions render_403 unless can_read_experiment?(@experiment) end def check_manage_permissions render_403 unless can_manage_experiment?(@experiment) end def check_archive_permissions render_403 unless can_archive_experiment?(@experiment) end def check_clone_permissions render_403 unless can_clone_experiment?(@experiment) end def check_move_permissions render_403 unless can_move_experiment?(@experiment) end def set_inline_name_editing return unless can_manage_experiment?(@experiment) @inline_editable_title_config = { name: 'title', params_group: 'experiment', item_id: @experiment.id, field_to_udpate: 'name', path_to_update: experiment_path(@experiment) } end def experiment_annotation_notification(old_text = nil) smart_annotation_notification( old_text: old_text, new_text: @experiment.description, title: t('notifications.experiment_annotation_title', experiment: @experiment.name, user: current_user.full_name), message: t('notifications.experiment_annotation_message_html', project: link_to(@experiment.project.name, project_url(@experiment.project)), experiment: link_to(@experiment.name, canvas_experiment_url(@experiment))) ) end def log_activity(type_of) Activities::CreateActivityService .call(activity_type: type_of, owner: current_user, team: @experiment.project.team, project: @experiment.project, subject: @experiment, message_items: { experiment: @experiment.id }) end end