mirror of
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690 lines
23 KiB
Ruby
690 lines
23 KiB
Ruby
class MyModulesController < ApplicationController
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include SampleActions
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include TeamsHelper
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include ActionView::Helpers::TextHelper
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include InputSanitizeHelper
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include Rails.application.routes.url_helpers
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include ActionView::Helpers::UrlHelper
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include ApplicationHelper
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before_action :load_vars,
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only: %i(show update destroy description due_date protocols
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results samples activities activities_tab
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assign_samples unassign_samples delete_samples
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toggle_task_state samples_index archive
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complete_my_module repository repository_index
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assign_repository_records unassign_repository_records
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unassign_repository_records_modal
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assign_repository_records_modal
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repositories_dropdown update_description update_protocol_description unshared_inventory)
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before_action :load_vars_nested, only: %i(new create)
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before_action :load_repository, only: %i(assign_repository_records
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unassign_repository_records
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unassign_repository_records_modal
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assign_repository_records_modal
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repository_index)
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before_action :load_projects_tree, only: %i(protocols results activities
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samples repository archive unshared_inventory)
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before_action :check_manage_permissions_archive, only: %i(update destroy)
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before_action :check_manage_permissions,
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only: %i(description due_date update_description update_protocol_description)
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before_action :check_view_permissions, only:
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%i(show activities activities_tab protocols results samples samples_index
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archive repositories_dropdown)
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before_action :check_complete_module_permission, only: :complete_my_module
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before_action :check_assign_repository_records_permissions,
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only: %i(unassign_repository_records_modal
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assign_repository_records_modal
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assign_repository_records
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unassign_repository_records
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assign_samples
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unassign_samples)
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before_action :set_inline_name_editing, only: %i(protocols results activities repository archive)
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layout 'fluid'.freeze
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# Define submit actions constants (used in routing)
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ASSIGN_SAMPLES = 'Assign'.freeze
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UNASSIGN_SAMPLES = 'Unassign'.freeze
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# Action defined in SampleActions
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DELETE_SAMPLES = 'Delete'.freeze
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def show
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respond_to do |format|
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format.json {
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render :json => {
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:html => render_to_string({
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:partial => "show.html.erb"
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})
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}
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}
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end
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end
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# Description modal window in full-zoom canvas
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def description
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respond_to do |format|
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format.html
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format.json {
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render json: {
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html: render_to_string({
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partial: "description.html.erb"
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}),
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title: t('my_modules.description.title',
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module: escape_input(@my_module.name))
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}
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}
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end
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end
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def activities
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params[:subjects] = {
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MyModule: [@my_module.id]
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}
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@activity_types = Activity.activity_types_list
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@user_list = User.where(id: UserTeam.where(team: current_user.teams).select(:user_id))
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.distinct
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.pluck(:full_name, :id)
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activities = ActivitiesService.load_activities(current_user, current_team, activity_filters)
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@grouped_activities = activities.group_by do |activity|
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Time.zone.at(activity.created_at).to_date.to_s
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end
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@next_page = activities.next_page
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@starting_timestamp = activities.first&.created_at.to_i
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respond_to do |format|
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format.json do
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render json: {
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activities_html: render_to_string(
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partial: 'global_activities/activity_list.html.erb'
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),
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next_page: @next_page,
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starting_timestamp: @starting_timestamp
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}
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end
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format.html do
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end
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end
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end
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# Different controller for showing activities inside tab
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def activities_tab
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@activities = @my_module.last_activities(1, @per_page)
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respond_to do |format|
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format.html
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format.json {
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render :json => {
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:html => render_to_string({
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:partial => "activities.html.erb"
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})
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}
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}
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end
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end
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# Due date modal window in full-zoom canvas
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def due_date
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respond_to do |format|
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format.html
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format.json {
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render json: {
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html: render_to_string({
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partial: "due_date.html.erb"
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}),
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title: t('my_modules.due_date.title',
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module: escape_input(@my_module.name))
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}
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}
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end
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end
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def update
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@my_module.assign_attributes(my_module_params)
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@my_module.last_modified_by = current_user
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description_changed = @my_module.description_changed?
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start_date_changes = @my_module.changes[:started_on]
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due_date_changes = @my_module.changes[:due_date]
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if @my_module.archived_changed?(from: false, to: true)
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saved = @my_module.archive(current_user)
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elsif @my_module.archived_changed?(from: true, to: false)
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saved = @my_module.restore(current_user)
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if saved
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restored = true
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log_activity(:restore_module)
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end
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else
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saved = @my_module.save
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if saved
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if description_changed
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log_activity(:change_module_description)
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TinyMceAsset.update_images(@my_module, params[:tiny_mce_images], current_user)
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end
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log_start_date_change_activity(start_date_changes) if start_date_changes.present?
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log_due_date_change_activity(due_date_changes) if due_date_changes.present?
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end
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end
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respond_to do |format|
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if restored
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format.html do
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flash[:success] = t(
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'my_modules.module_archive.restored_flash',
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module: @my_module.name
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)
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redirect_to module_archive_experiment_path(@my_module.experiment)
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end
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elsif saved
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format.json do
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alerts = []
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alerts << 'alert-green' if @my_module.completed?
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unless @my_module.completed?
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alerts << 'alert-red' if @my_module.is_overdue?
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alerts << 'alert-yellow' if @my_module.is_one_day_prior?
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end
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render json: {
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status: :ok,
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start_date_label: render_to_string(
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partial: 'my_modules/start_date_label.html.erb',
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locals: { my_module: @my_module }
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),
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due_date_label: render_to_string(
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partial: 'my_modules/due_date_label.html.erb',
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locals: { my_module: @my_module }
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),
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card_due_date_label: render_to_string(
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partial: 'my_modules/card_due_date_label.html.erb',
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locals: { my_module: @my_module }
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),
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module_header_due_date: render_to_string(
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partial: 'my_modules/module_header_due_date.html.erb',
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locals: { my_module: @my_module }
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),
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description_label: render_to_string(
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partial: 'my_modules/description_label.html.erb',
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locals: { my_module: @my_module }
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),
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alerts: alerts
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}
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end
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else
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format.json do
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render json: @my_module.errors,
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status: :unprocessable_entity
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end
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end
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end
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end
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def update_description
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respond_to do |format|
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format.json do
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if @my_module.update(description: params.require(:my_module)[:description])
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log_activity(:change_module_description)
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TinyMceAsset.update_images(@my_module, params[:tiny_mce_images], current_user)
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render json: {
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html: custom_auto_link(
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@my_module.tinymce_render(:description),
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simple_format: false,
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tags: %w(img),
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team: current_team
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)
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}
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else
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render json: @my_module.errors, status: :unprocessable_entity
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end
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end
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end
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end
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def update_protocol_description
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protocol = @my_module.protocol
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return render_404 unless protocol
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respond_to do |format|
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format.json do
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if protocol.update(description: params.require(:protocol)[:description])
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log_activity(:protocol_description_in_task_edited)
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TinyMceAsset.update_images(protocol, params[:tiny_mce_images], current_user)
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render json: {
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html: custom_auto_link(
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protocol.tinymce_render(:description),
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simple_format: false,
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tags: %w(img),
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team: current_team
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)
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}
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else
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render json: protocol.errors, status: :unprocessable_entity
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end
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end
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end
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end
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def protocols
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@protocol = @my_module.protocol
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@assigned_repositories = @my_module.live_and_snapshot_repositories_list
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current_team_switch(@protocol.team)
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end
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def results
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current_team_switch(@my_module
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.experiment
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.project
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.team)
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end
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def samples
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@samples_index_link = samples_index_my_module_path(@my_module, format: :json)
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@team = @my_module.experiment.project.team
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end
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def repository
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@repository = Repository.find_by_id(params[:repository_id])
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render_403 if @repository.nil? || !can_read_repository?(@repository)
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end
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def archive
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@archived_results = @my_module.archived_results
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current_team_switch(@my_module
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.experiment
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.project
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.team)
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end
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# Submit actions
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def assign_samples
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if params[:sample_ids].present?
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samples = []
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params[:sample_ids].each do |id|
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sample = Sample.find_by_id(id)
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sample.last_modified_by = current_user
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sample.save
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if sample
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samples << sample
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end
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end
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task_names = []
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new_samples = []
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@my_module.downstream_modules.each do |my_module|
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new_samples = samples.select { |el| my_module.samples.exclude?(el) }
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my_module.samples.push(*new_samples)
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task_names << my_module.name
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end
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end
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redirect_to samples_my_module_path(@my_module)
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end
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def unassign_samples
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if params[:sample_ids].present?
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samples = []
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params[:sample_ids].each do |id|
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sample = Sample.find_by_id(id)
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sample.last_modified_by = current_user
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sample.save
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if sample && @my_module.samples.include?(sample)
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samples << sample
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end
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end
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task_names = []
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@my_module.downstream_modules.each do |my_module|
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task_names << my_module.name
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my_module.samples.destroy(samples & my_module.samples)
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end
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end
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redirect_to samples_my_module_path(@my_module)
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end
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# AJAX actions
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def samples_index
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@team = @my_module.experiment.project.team
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respond_to do |format|
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format.html
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format.json do
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render json: ::SampleDatatable.new(view_context,
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@team,
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nil,
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@my_module,
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nil,
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current_user)
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end
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end
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end
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# AJAX actions
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def repository_index
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@draw = params[:draw].to_i
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per_page = params[:length] == '-1' ? 100 : params[:length].to_i
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page = (params[:start].to_i / per_page) + 1
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datatable_service = RepositoryDatatableService.new(@repository, params, current_user, @my_module)
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@all_rows_count = datatable_service.all_count
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@columns_mappings = datatable_service.mappings
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@repository_rows = datatable_service.repository_rows
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.preload(:repository_columns,
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:created_by,
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repository_cells: @repository.cell_preload_includes)
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.page(page)
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.per(per_page)
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render 'repository_rows/index.json'
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end
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def repositories_dropdown
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load_repository if params[:repository_id].present?
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respond_to do |format|
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format.json do
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render json: {
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html: render_to_string(
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partial: 'repositories_dropdown.html.erb',
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locals: { enable_counters: true }
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)
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}
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end
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end
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end
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# Submit actions
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def assign_repository_records
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service = RepositoryRows::MyModuleAssigningService.call(my_module: @my_module,
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repository: @repository,
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user: current_user,
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params: params)
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if service.succeed? && service.assigned_rows_names.any?
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names = service.assigned_rows_names.map { |name| escape_input(name) }
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message = params[:downstream].blank? ? 'assigned_records_flash' : 'assigned_records_downstream_flash'
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flash = I18n.t("repositories.#{message}", records: names.join(', '))
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status = :ok
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else
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flash = t('repositories.no_records_assigned_flash')
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status = :bad_request
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end
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respond_to do |format|
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format.json do
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render json: { flash: flash }, status: status
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end
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end
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end
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def unassign_repository_records
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service = RepositoryRows::MyModuleUnassigningService.call(my_module: @my_module,
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repository: @repository,
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user: current_user,
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params: params)
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if service.succeed? && service.unassigned_rows_names.any?
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flash = I18n.t('repositories.unassigned_records_flash',
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records: service.unassigned_rows_names.map { |name| escape_input(name) }.join(', '))
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status = :ok
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else
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flash = t('repositories.no_records_unassigned_flash')
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status = :bad_request
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end
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respond_to do |format|
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format.json do
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render json: { flash: flash }, status: status
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end
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end
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end
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def unassign_repository_records_modal
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selected_rows = params[:selected_rows]
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modal = render_to_string(
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partial: 'my_modules/modals/unassign_repository_records_modal.html.erb',
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locals: { my_module: @my_module,
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repository: @repository,
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selected_rows: selected_rows }
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)
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render json: { html: modal }, status: :ok
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end
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def assign_repository_records_modal
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selected_rows = params[:selected_rows]
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modal = render_to_string(
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partial: 'my_modules/modals/assign_repository_records_modal.html.erb',
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locals: { my_module: @my_module,
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repository: @repository,
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selected_rows: selected_rows }
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)
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render json: { html: modal }, status: :ok
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end
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# Complete/uncomplete task
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def toggle_task_state
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respond_to do |format|
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if can_complete_module?(@my_module)
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@my_module.completed? ? @my_module.uncomplete : @my_module.complete
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completed = @my_module.completed?
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if @my_module.save
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task_completion_activity
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# Render new button HTML
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if completed
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new_btn_partial = 'my_modules/state_button_uncomplete.html.erb'
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else
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new_btn_partial = 'my_modules/state_button_complete.html.erb'
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end
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format.json do
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render json: {
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new_btn: render_to_string(partial: new_btn_partial),
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completed: completed,
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module_header_due_date: render_to_string(
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partial: 'my_modules/module_header_due_date.html.erb',
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locals: { my_module: @my_module }
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),
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module_state_label: render_to_string(
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partial: 'my_modules/module_state_label.html.erb',
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locals: { my_module: @my_module }
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)
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}
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end
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else
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format.json { render json: {}, status: :unprocessable_entity }
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end
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else
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format.json { render json: {}, status: :unauthorized }
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end
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end
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end
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def complete_my_module
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respond_to do |format|
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if @my_module.uncompleted? && @my_module.check_completness_status
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@my_module.complete
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@my_module.save
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task_completion_activity
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format.json do
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render json: {
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task_button_title: t('my_modules.buttons.uncomplete'),
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module_header_due_date: render_to_string(
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partial: 'my_modules/module_header_due_date.html.erb',
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locals: { my_module: @my_module }
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),
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module_state_label: render_to_string(
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partial: 'my_modules/module_state_label.html.erb',
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locals: { my_module: @my_module }
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)
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}, status: :ok
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end
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else
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format.json { render json: {}, status: :unprocessable_entity }
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end
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end
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end
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def unshared_inventory
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@inventory = Repository.used_on_task_but_unshared(@my_module, current_team).find(params[:inventory_id])
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@inventory_admin = @inventory.created_by
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end
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private
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def task_completion_activity
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completed = @my_module.completed?
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log_activity(completed ? :complete_task : :uncomplete_task)
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start_work_on_next_task_notification
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end
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def start_work_on_next_task_notification
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if @my_module.completed?
|
|
title = t('notifications.start_work_on_next_task',
|
|
user: current_user.full_name,
|
|
module: @my_module.name)
|
|
message = t('notifications.start_work_on_next_task_message',
|
|
project: link_to(@project.name, project_url(@project)),
|
|
experiment: link_to(@experiment.name,
|
|
canvas_experiment_url(@experiment)),
|
|
my_module: link_to(@my_module.name,
|
|
protocols_my_module_url(@my_module)))
|
|
notification = Notification.create(
|
|
type_of: :recent_changes,
|
|
title: sanitize_input(title, %w(strong a)),
|
|
message: sanitize_input(message, %w(strong a)),
|
|
generator_user_id: current_user.id
|
|
)
|
|
# create notification for all users on the next modules in the workflow
|
|
@my_module.my_modules.map(&:users).flatten.uniq.each do |target_user|
|
|
next if target_user == current_user || !target_user.recent_notification
|
|
UserNotification.create(notification: notification, user: target_user)
|
|
end
|
|
end
|
|
end
|
|
|
|
def load_vars
|
|
@my_module = MyModule.find_by_id(params[:id])
|
|
if @my_module
|
|
@experiment = @my_module.experiment
|
|
@project = @my_module.experiment.project if @experiment
|
|
else
|
|
render_404
|
|
end
|
|
end
|
|
|
|
def load_repository
|
|
@repository = Repository.find_by(id: params[:repository_id])
|
|
render_404 unless @repository
|
|
render_403 unless can_read_repository?(@repository)
|
|
end
|
|
|
|
def load_projects_tree
|
|
# Switch to correct team
|
|
current_team_switch(@project.team) unless @project.nil?
|
|
@projects_tree = current_user.projects_tree(current_team, nil)
|
|
end
|
|
|
|
def check_manage_permissions
|
|
render_403 && return unless can_manage_module?(@my_module)
|
|
end
|
|
|
|
def check_manage_permissions_archive
|
|
render_403 && return unless if my_module_params[:archived] == 'false'
|
|
can_restore_module?(@my_module)
|
|
else
|
|
can_manage_module?(@my_module)
|
|
end
|
|
end
|
|
|
|
def check_view_permissions
|
|
render_403 unless can_read_experiment?(@my_module.experiment)
|
|
end
|
|
|
|
def check_assign_repository_records_permissions
|
|
render_403 unless module_page? &&
|
|
can_assign_repository_rows_to_module?(@my_module)
|
|
end
|
|
|
|
def check_assign_samples_permissions
|
|
render_403 unless module_page? &&
|
|
can_assign_sample_to_module?(@my_module)
|
|
end
|
|
|
|
def check_complete_module_permission
|
|
render_403 unless can_complete_module?(@my_module)
|
|
end
|
|
|
|
def set_inline_name_editing
|
|
return unless can_manage_module?(@my_module)
|
|
@inline_editable_title_config = {
|
|
name: 'title',
|
|
params_group: 'my_module',
|
|
item_id: @my_module.id,
|
|
field_to_udpate: 'name',
|
|
path_to_update: my_module_path(@my_module)
|
|
}
|
|
end
|
|
|
|
def my_module_params
|
|
update_params = params.require(:my_module).permit(:name, :description, :started_on, :due_date, :archived)
|
|
|
|
if update_params[:started_on].present?
|
|
update_params[:started_on] =
|
|
Time.zone.strptime(update_params[:started_on], I18n.backend.date_format.dup.gsub(/%-/, '%') + ' %H:%M')
|
|
end
|
|
if update_params[:due_date].present?
|
|
update_params[:due_date] =
|
|
Time.zone.strptime(update_params[:due_date], I18n.backend.date_format.dup.gsub(/%-/, '%') + ' %H:%M')
|
|
end
|
|
|
|
update_params
|
|
end
|
|
|
|
def log_start_date_change_activity(start_date_changes)
|
|
type_of = if start_date_changes[0].nil? # set started_on
|
|
message_items = { my_module_started_on: @my_module.started_on }
|
|
:set_task_start_date
|
|
elsif start_date_changes[1].nil? # remove started_on
|
|
message_items = { my_module_started_on: start_date_changes[0] }
|
|
:remove_task_start_date
|
|
else # change started_on
|
|
message_items = { my_module_started_on: @my_module.started_on }
|
|
:change_task_start_date
|
|
end
|
|
log_activity(type_of, @my_module, message_items)
|
|
end
|
|
|
|
def log_due_date_change_activity(due_date_changes)
|
|
type_of = if due_date_changes[0].nil? # set due_date
|
|
message_items = { my_module_duedate: @my_module.due_date }
|
|
:set_task_due_date
|
|
elsif due_date_changes[1].nil? # remove due_date
|
|
message_items = { my_module_duedate: due_date_changes[0] }
|
|
:remove_task_due_date
|
|
else # change due_date
|
|
message_items = { my_module_duedate: @my_module.due_date }
|
|
:change_task_due_date
|
|
end
|
|
log_activity(type_of, @my_module, message_items)
|
|
end
|
|
|
|
def log_activity(type_of, my_module = nil, message_items = {})
|
|
my_module ||= @my_module
|
|
message_items = { my_module: my_module.id }.merge(message_items)
|
|
|
|
Activities::CreateActivityService
|
|
.call(activity_type: type_of,
|
|
owner: current_user,
|
|
team: my_module.experiment.project.team,
|
|
project: my_module.experiment.project,
|
|
subject: my_module,
|
|
message_items: message_items)
|
|
end
|
|
|
|
def activity_filters
|
|
params.permit(
|
|
:page, :starting_timestamp, :from_date, :to_date, types: [], users: [], subjects: {}
|
|
)
|
|
end
|
|
end
|