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118 lines
4.4 KiB
Ruby
118 lines
4.4 KiB
Ruby
require_relative '../../app/services/tasks/samples_to_repository_migration_service'
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namespace :samples_to_repository_migration do
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desc 'Migrates all data from samples to custom repository'
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task :run, [:last_id] => :environment do |_, args|
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params = { batch_size: 10 }
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migration_service = Tasks::SamplesToRepositoryMigrationService
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if args.present? && args[:last_id].present?
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params[:start] = args[:last_id].to_i
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end
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Team.find_each(params) do |team|
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puts "******************************* \n\n"
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puts "Processing Team id => [#{team.id}] \n\n"
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puts '*******************************'
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ActiveRecord::Base.transaction do
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team_samples = migration_service.fetch_all_team_samples(team)
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repository = migration_service.prepare_repository(team)
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custom_columns = migration_service.get_custom_columns(team, repository)
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team_samples.each do |item|
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created_by = item['sample_created_by_id'] || team.created_by_id
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last_modified_by = item['sample_last_modified_by_id']
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last_modified_by ||= team.created_by_id
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row = RepositoryRow.create!(
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name: item['sample_name'],
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created_at: item['sample_created_at'],
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updated_at: item['sample_updated_at'],
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created_by_id: created_by,
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last_modified_by_id: last_modified_by,
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repository: repository
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)
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# check if sample has sample type assigned
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if item['sample_type_name']
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column = custom_columns.detect { |el| el['name'] == 'Sample type' }
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list_item = column.repository_list_items.where(
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data: item['sample_type_name']
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).take
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RepositoryListValue.create!(
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created_by: list_item.created_by,
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last_modified_by: list_item.last_modified_by,
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repository_list_item: list_item,
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repository_cell_attributes: {
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repository_row: row,
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repository_column: column
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}
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)
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end
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# check if sample has sample group assigned
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if item['sample_group_name']
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column = custom_columns.detect { |el| el['name'] == 'Sample group' }
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list_item = column.repository_list_items.where(
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data: item['sample_group_name']
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).take
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RepositoryListValue.create!(
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created_by: list_item.created_by,
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last_modified_by: list_item.last_modified_by,
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repository_list_item: list_item,
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repository_cell_attributes: {
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repository_row: row,
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repository_column: column
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}
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)
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# assign sample group color to the sample
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if item['sample_group_color']
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column = custom_columns.detect do |el|
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el['name'] == 'Sample group color hex'
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end
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RepositoryTextValue.create!(
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data: item['sample_group_color'],
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created_by_id: created_by,
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last_modified_by_id: last_modified_by,
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repository_cell_attributes: {
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repository_row: row,
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repository_column: column
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}
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)
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end
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end
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# append custom fields
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custom_fields = migration_service.get_sample_custom_fields(
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item['sample_id']
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)
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custom_fields.each do |field|
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column = custom_columns.detect do |el|
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el['name'] == field['column_name_reference']
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end
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RepositoryTextValue.create!(
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data: field['value'],
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created_by_id: created_by,
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last_modified_by_id: last_modified_by,
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repository_cell_attributes: {
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repository_row: row,
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repository_column: column
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}
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)
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end
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# assign repository item to a tasks
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assigned_modules = migration_service.get_assigned_sample_module(
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item['sample_id']
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)
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assigned_modules.each do |element|
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MyModuleRepositoryRow.create!(
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my_module_id: element['my_module_id'],
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repository_row: row,
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assigned_by_id: element['assigned_by_id'] || created_by
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)
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end
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end
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end
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end
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end
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end
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