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18 lines
4.7 KiB
YAML
18 lines
4.7 KiB
YAML
# Content for tables used in demo project.
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module1:
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experimental_design_table: '{"data":[["group/time","1 dpi","6 dpi","",""],["PVYNTN","1","1","",""],["mock","1","1","",""],["","","","",""]]}'
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module2:
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samples_table: '{"data":[["Name","Sample type"],["Mock 1dpi","potatoe leaves"],["Mock 6dpi","potatoe leaves"],["PVY NTN 1dpi","potatoe leaves"],["PVY NTN 6dpi","potatoe leaves"]]}'
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module3:
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nanodrop: '{"data":[["Sample name","ng/ul ","260/280 ","260/230 "],["PVY NTN 6dpi","1.05","1.39","1.61"],["PVY NTN 1dpi","320.52","2.16","2.26"],["Mock 6dpi","906.19","2.15","2.26"],["Mock 1dpi","940.22","2.17","2.27"]]}'
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module4:
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volumes: '{"data":[["Amount of starting material (mg)","Volume of Buffer RLT (µl)"],["<20","350"],["20 - 30","600"]]}'
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dna_q: '{"data":[["Sample 1","Quantity "],["1","0,2"],["2","0,5"],["3","0,4"],["4","1,1"],["5","12,5"],["6","0,05"],["7","0"],["8","0"],["9","0"],["10","0"],["11","0"],["12","4,7"],["13","2,3"],["14","5,6"],["15","2,6"],["16","8,9"],["17","1,7"],["18","1"]]}'
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module6:
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mastermix: '{"data":[["Date:","","","","","","","","","","","",""],["Reaction volume:","20 ul","","","","","","","","","","",""],["UMM/reaction:","10 µl","","","","","","","","","","",""],["sample/reaction:","6 µl","","","","","","","","","","",""],["","","","","","","","","","","","",""],["Chemistry","TaqMan","","","SYBR Green I","","","TaqMan","","","SYBR Green I","",""],["Gene","cox","","","cab4","","","PVY-NTN","","","PR-1","",""],["","conc.*","final conc.**","µl/reaction","conc.*","final conc.**","µl/reaction","conc.*","final conc.**","µl/reaction","conc.*","final conc.**","µl/reaction"],["Probe","10 µM","150 nM","0.3","/","/","/","5 µM","150 nM","0.6","/","/","/"],["FP","30 µM","300 nM","0.2","30 µM","300 nM ","0.2","10 µM","250 nM","0.5","30 µM","300 nM ","0.2"],["RP","30 µM","300 nM","0.2","30 µM","300 nM ","0.2","10 µM","250 nM","0.5","30 µM","300 nM ","0.2"]]}'
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distribution: '{"data":[["%{sample0} (100x)\t","%{sample0} (100x)\t","%{sample0} (100x)\t","%{sample0} (100x)\t","%{sample0} (100x)\t","%{sample0} (100x)\t","%{sample0} (100x)\t","%{sample0} (100x)\t",null,null,"Mix smpl (10x)\t","Mix smpl (10x)\t"],["%{sample0} (1000x)\t","%{sample0} (1000x)\t","%{sample0} (1000x)\t","%{sample0} (1000x)\t","%{sample0} (1000x)\t","%{sample0} (1000x)\t","%{sample0} (1000x)\t","%{sample0} (1000x)\t",null,null,"Mix smpl (100x)\t","Mix smpl (100x)\t"],["%{sample1} (100x)\t","%{sample1} (100x)\t","%{sample1} (100x)\t","%{sample1} (100x)\t","%{sample1} (100x)\t","%{sample1} (100x)\t","%{sample1} (100x)\t","%{sample1} (100x)\t",null,null,"Mix smpl (1000x)\t","Mix smpl (1000x)\t"],["%{sample1} (1000x)\t","%{sample1} (1000x)\t","%{sample1} (1000x)\t","%{sample1} (1000x)\t","%{sample1} (1000x)\t","%{sample1} (1000x)\t","%{sample1} (1000x)\t","%{sample1} (1000x)\t",null,null,"Mix smpl (10000x)\t","Mix smpl (10000x)\t"],["%{sample2} (100x)\t","%{sample2} (100x)\t","%{sample2} (100x)\t","%{sample2} (100x)\t","%{sample2} (100x)\t","%{sample2} (100x)\t","%{sample2} (100x)\t","%{sample2} (100x)\t",null,null,"NTC1","NTC2"],["%{sample2} (1000x)\t","%{sample2} (1000x)\t","%{sample2} (1000x)\t","%{sample2} (1000x)\t","%{sample2} (1000x)\t","%{sample2} (1000x)\t","%{sample2} (1000x)\t","%{sample2} (1000x)\t",null,null,"NTC1","NTC2"],["%{sample3} (100x)\t","%{sample3} (100x)\t","%{sample3} (100x)\t","%{sample3} (100x)\t","%{sample3} (100x)\t","%{sample3} (100x)\t","%{sample3} (100x)\t","%{sample3} (100x)\t",null,null,"NTC1","NTC2"],["%{sample3} (1000x)\t","%{sample3} (1000x)\t","%{sample3} (1000x)\t","%{sample3} (1000x)\t","%{sample3} (1000x)\t","%{sample3} (1000x)\t","%{sample3} (1000x)\t","%{sample3} (1000x)\t",null,null,"NTC1","NTC2"],[null,null,null,null,null,null,null,null,null,null,null,null]]}'
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qpcr_raw_data: '{"data":[["Sample 1","Quantity ","Column 3","Column 4"],["2","0,2","0,4","0,08"],["2","0,5","1","0,5"],["3","0,4","1,2","0,48"],["4","1,1","4,4","4,84"],["5","12,5","62,5","781,25"],["6","0,05","0,3","0,015"],["7","0","4","0"],["8","0","0","0"],["9","0","0","0"],["10","0","0","0"],["11","0","0","0"],["12","4,7","56,4","265,08"],["13","2,3","30","69"],["14","5,6","78,4","439,04"],["15","2,6","39","101,4"],["16","8,9","142,4","1267,36"],["17","1,7","28,9","49,13"],["18","1","18","18"],["","","",""]]}'
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module7:
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qpcr_results: '{"data":[["Sample 1","Quantity ",null,null,null],["1","0,2",null,null,null],["2","0,5",null,null,null],["3","0,4",null,null,null],["4","1,1",null,null,null],["5","12,5",null,null,null],["6","0,05",null,null,null],["7","0",null,null,null],["8","0",null,null,null],["9","0",null,null,null],["10","0",null,null,null],["11","0",null,null,null],["12","4,7",null,null,null],["13","2,3",null,null,null],["14","5,6",null,null,null],["15","2,6",null,null,null],["16","8,9",null,null,null],["17","1,7",null,null,null],["18","1",null,null,null]]}'
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