mirror of
https://github.com/scinote-eln/scinote-web.git
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144 lines
3.7 KiB
Ruby
144 lines
3.7 KiB
Ruby
module ProtocolsImporter
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include RenamingUtil
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def import_new_protocol(protocol_json, organization, type, user)
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remove_empty_inputs(protocol_json)
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protocol = Protocol.new(
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name: protocol_json["name"],
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description: protocol_json["description"],
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authors: protocol_json["authors"],
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protocol_type: (type == :public ? :in_repository_public : :in_repository_private),
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published_on: (type == :public ? Time.now : nil),
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added_by: user,
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organization: @organization
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)
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# Try to rename record
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if protocol.invalid? then
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rename_record(protocol, :name)
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end
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# Okay, now save the protocol
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protocol.save!
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# Protocol is saved, populate it
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populate_protocol(protocol, protocol_json, user)
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return protocol
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end
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def import_into_existing(protocol, protocol_json, user)
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# Firstly, destroy existing protocol's contents
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protocol.destroy_contents(user)
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protocol.reload
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# Alright, now populate the protocol
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populate_protocol(protocol, protocol_json, user)
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protocol.reload
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# Unlink the protocol
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protocol.unlink
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protocol
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end
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private
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def populate_protocol(protocol, protocol_json, user)
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protocol.reload
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asset_ids = []
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step_pos = 0
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# Check if protocol has steps
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if protocol_json['steps']
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protocol_json['steps'].values.each do |step_json|
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step = Step.create!(
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name: step_json["name"],
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description: step_json["description"],
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position: step_pos,
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completed: false,
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user: user,
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last_modified_by: user,
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protocol: protocol
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)
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step_pos += 1
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if step_json["checklists"]
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step_json["checklists"].values.each do |checklist_json|
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checklist = Checklist.create!(
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name: checklist_json["name"],
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step: step,
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created_by: user,
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last_modified_by: user
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)
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if checklist_json["items"]
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item_pos = 0
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checklist_json["items"].values.each do |item_json|
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item = ChecklistItem.create!(
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text: item_json["text"],
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checked: false,
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position: item_pos,
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created_by: user,
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last_modified_by: user,
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checklist: checklist
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)
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item_pos += 1
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end
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end
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end
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end
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if step_json["tables"]
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step_json["tables"].values.each do |table_json|
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table = Table.create!(
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contents: Base64.decode64(table_json["contents"]),
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created_by: user,
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last_modified_by: user
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)
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StepTable.create!(
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step: step,
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table: table
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)
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end
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end
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if step_json["assets"]
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step_json["assets"].values.each do |asset_json|
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asset = Asset.new(
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created_by: user,
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last_modified_by: user
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)
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# Decode the file bytes
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asset.file = StringIO.new(Base64.decode64(asset_json["bytes"]))
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asset.file_file_name = asset_json["fileName"]
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asset.file_content_type = asset_json["fileType"]
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asset.save!
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asset_ids << asset.id
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StepAsset.create!(
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step: step,
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asset: asset
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)
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end
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end
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end
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end
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# Post process assets
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asset_ids.each do |asset_id|
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Asset.find(asset_id).post_process_file(protocol.organization)
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end
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end
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def remove_empty_inputs(obj)
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obj.keys.each do |key|
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if obj[key] == ""
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obj[key] = nil
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elsif obj[key].kind_of? Hash
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# Recursive call
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remove_empty_inputs(obj[key])
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end
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end
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end
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end
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