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104 lines
2.7 KiB
Python
104 lines
2.7 KiB
Python
import logging
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import pytest
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from felicity.apps.impress.tasks import impress_results
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logging.basicConfig(level=logging.INFO)
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logger = logging.getLogger(__name__)
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@pytest.mark.asyncio
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@pytest.mark.order(90)
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async def test_sample_publish(gql_client, auth_data):
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add_gql = """
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mutation PublishSamples ($samples: [SamplePublishInputType!]!) {
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publishSamples(samples: $samples){
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... on OperationSuccess{
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__typename
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message
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}
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... on OperationError {
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__typename
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error
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suggestion
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}
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}
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}
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"""
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response = await gql_client.post(
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"/felicity-gql",
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json={
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"query": add_gql,
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"variables": {
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"samples": [
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{"uid": 1, "action": "publish"},
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{"uid": 2, "action": "publish"},
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{"uid": 3, "action": "publish"},
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{"uid": 4, "action": "publish"},
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{"uid": 5, "action": "publish"},
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],
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},
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},
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headers=auth_data["headers"],
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)
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logger.info(f"publishing samples response: {response} {response.json()}")
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assert response.status_code == 200
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_data = response.json()["data"]["publishSamples"]
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assert _data["message"] == "Your results are being published in the background."
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# process job for the next test
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await impress_results(6)
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@pytest.mark.asyncio
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@pytest.mark.order(91)
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async def test_sample_invalidate(gql_client, auth_data):
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add_gql = """
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mutation InvalidateSamples ($samples: [Int!]!) {
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invalidateSamples(samples: $samples){
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... on SampleListingType{
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__typename
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samples {
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uid
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status
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sampleId
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}
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}
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... on OperationError {
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__typename
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error
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suggestion
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}
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}
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}
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"""
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response = await gql_client.post(
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"/felicity-gql",
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json={
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"query": add_gql,
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"variables": {
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"samples": [1],
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},
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},
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headers=auth_data["headers"],
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)
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logger.info(f"publishing samples response: {response} {response.json()}")
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assert response.status_code == 200
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_data = response.json()["data"]["invalidateSamples"]
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assert len(_data["samples"]) == 2
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for _, sample in enumerate(_data["samples"]):
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if sample["uid"] == 1:
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assert sample["status"] == "invalidated"
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assert sample["sampleId"].endswith("_R01") is False
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else:
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assert sample["status"] == "received"
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assert sample["sampleId"].endswith("_R01") is True
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