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2572 commits

Author SHA1 Message Date
aignatov-bio 6d8908c1f5
Merge branch 'features/label-templates' into ai-sci-7054-add-flyout-to-search-repository-columns-to-zpl-editor 2022-08-24 17:48:48 +02:00
Martin Artnik 0aa4ff11d4 Add missing route [SCI-7053] 2022-08-24 14:10:51 +02:00
artoscinote 7a7df03396
Implement label preview component [SCI-7050] (#4370) 2022-08-24 13:55:54 +02:00
Anton e22af8830a Add activties to step duplication [SCI-7109] 2022-08-24 13:45:39 +02:00
Anton bc112dd6af Add step duplication [SCI-7109] 2022-08-23 17:54:33 +02:00
Anton 1bac9aeb4c Add duplication to components [SCI-7108] 2022-08-22 15:03:49 +02:00
Anton 45bbbfffe4 Update label template promo text [SCI-7060] 2022-08-18 15:33:19 +02:00
Anton 4f312bf329 Finalize insert field dropdown [SCI-7054] 2022-08-17 12:58:27 +02:00
ajugo 39fbb2a9a0
Fix office modal and protocol status [SCI-7064] (#4352) 2022-08-12 14:57:56 +02:00
artoscinote e4a7aa3dad
Add name prompt for tables with empty names [SCI-7082] (#4348) 
* Add name prompt for tables with empty names [SCI-7082]

* Move to separate component [SCI-7082]
 2022-08-12 10:17:45 +02:00
ajugo 83c78d660f
Added activity for update protocol name [SCI-7095] (#4346) 
* Added activity for update protocol name [SCI-7095]

* Fix activity log for updated protocol name [SCI-7095]

* Fix activity log for updated protocol name [SCI-7095]
 2022-08-11 14:09:01 +02:00
artoscinote 4e768bec04
Add endpoint for fetching label template tags [SCI-7053] (#4319) 2022-08-10 11:35:38 +02:00
ajugo b6f273410b
Fix protocol repository CSS [SCI-7064] (#4335) 
* Fix protocol repository CSS [SCI-7064]

* Fix protocol repository CSS [SCI-7064]

* Fix hound [SCI-7064]
 2022-08-10 10:27:15 +02:00
artoscinote c106c2d997
Add active reminders filter [SCI-7004] (#4280) 2022-08-09 10:23:40 +02:00
ajugo 1ee091aa53
Fix selected default step title and step name placeholder [SCI-7067] (#4326) 
* Fix selected default step title in edit mode and step name placeholder [SCI-7067]

* Add new placeholder label [SCI-7067]
 2022-08-08 16:50:34 +02:00
Anton 51cb951e06 Update labels index page [SCI-7048] 2022-08-08 11:15:46 +02:00
artoscinote eb619184a5
Implement typed label templates [SCI-7046] (#4316) 
* Implement typed label templates [SCI-7046]

* Add structure.sql, fix migration [SCI-7046]

* Fix method name [SCI-7046]

* Add dependent option to team - label_template relation [SCI-7046]

* Migration code style, add input sanitization [SCI-7046]

* Fix new label creation [SCI-7046]
 2022-08-08 10:06:00 +02:00
aignatov-bio e5448f3d1f
Merge pull request #4311 from aignatov-bio/ai-sci-7030-label-template-view-edit-screen 
Add general layout for template view screen [SCI-7030]
 2022-08-04 14:13:25 +02:00
Anton a38aa80fb5 Add main functionality to view/edit screen [SCI-7041] 2022-08-04 13:37:21 +02:00
ajugo b58e3cd4d8
Add zebra settings screen [SCI-7016] (#4310) 
* Add zebra settings screen [SCI-7016]

* Fix hound [SCI-7016]
 2022-08-04 11:14:35 +02:00
Anton 31202922af Add general layout for template [SCI-7030] 2022-08-04 10:51:30 +02:00
Anton 8c080ea04c Add promo page for label templates [SCI-7029] 2022-08-02 14:51:18 +02:00
Alex Kriuchykhin baa565db8d
Merge pull request #4297 from okriuchykhin/ok_SCI_7028 
Make devise session timeout configurable through env variable [SCI-7028]
 2022-08-01 16:37:53 +02:00
Anton bf50c42549 Fix error handling for step attachments [SCI-7032] 2022-08-01 13:57:17 +02:00
artoscinote a527edd07d
Attachment management fixes [SCI-7022] (#4296) 
* Attachment management fixes [SCI-7022]

* Linter fixes [SCI-7022]
 2022-08-01 13:14:04 +02:00
Oleksii Kriuchykhin da9ad5797c Make devise session timeout configurable through env variable [SCI-7028] 2022-07-28 17:15:47 +02:00
Anton 67df01711f Add edit actions to label templates [SCI-7019] 2022-07-28 14:42:13 +02:00
aignatov-bio 0249f2a30e
CSS fixes for step attachments [SCI-7001] (#4294) 2022-07-28 09:56:09 +02:00
ajugo ad4f52d912
Add Label template list screen - view mode [SCI-7018] (#4292) 
* Initial label template datatable [SCI-7018]

* Add new columns to LabelTemplate and update datatable view [SCI-7018]

* Fix after rebase [SCI-7018]

* Fix migration, disable checkboxes in view mode and fix label template to team level [SCI-7018]
 2022-07-27 10:10:32 +02:00
Anton 6131b6c0b7 Add new templates section and navigation [SCI-7017] 2022-07-26 13:53:51 +02:00
Anton 3f82666619 Fix step for viewer role [SCI-6972] 2022-07-25 11:35:34 +02:00
ajugo 1732c8897a
Docx report fixes [SCI-6979] (#4265) 
* Fixes for docx [SCI-6979]

* Remove step description from DOCX [SCI-6979]
 2022-07-20 10:12:38 +02:00
Martin Artnik 6227b1f5a1 Added edit overlays, disable more controls [SCI-6983] 2022-07-19 14:22:40 +02:00
Martin Artnik 98b3627219 Implement multiline editing in repositories [SCI-6982] 2022-07-19 12:24:33 +02:00
ajugo a55d6ea9de
Replaced default ruby error pages [SCI-6967] (#4230) 
* Replaced default ruby error pages [SCI-6967]

* Remove error 500 in controller [SCI-6967]
 2022-07-15 10:43:07 +02:00
ajugo ccf95fea24
Fix file block issues [SCI-6966] (#4244) 
* Fix bugs for step attachments [SCI-6966]

* Fix flickering on fast drag over of file [SCI-6966]

* Fix flickering on fast drag over of file [SCI-6966]

* CSS fixes, rearrange steps button hiding [SCI-6940][SCI-6934] (#4234)

* Hide rearange steps button when less than 2 steps [SCI-6934]

* Task status buttons CSS fix [SCI-6940]

* Fix microinteraction for table editing [SCI-6957] (#4236)

* Fix protocol elements allignments [SCI-6932]

* DOCX layout improvements [SCI-6857] (#4160)

* Fix edit step button [SCI-6938] (#4232)

* Clean storage usage check [SCI-6966]

Co-authored-by: artoscinote <85488244+artoscinote@users.noreply.github.com>
Co-authored-by: Anton <anton@scinote.net>
 2022-07-15 10:13:55 +02:00
Oleksii Kriuchykhin a40b218f97 Fix step elements interactions for technician role [SCI-6973] 2022-07-15 10:09:38 +02:00
ajugo c85612ee4e
Fix protocol template alignment and placeholders [SCI-6981] (#4253) 
* Fix protocol template alignment and placeholders [SCI-6981]

* Add placeholder text [SCI-6981]
 2022-07-15 10:00:50 +02:00
Alex Kriuchykhin 46cf62368d
Merge pull request #4229 from okriuchykhin/ok_SCI_6969 
Fix file upload and edit interactions on steps page [SCI-6969]
 2022-07-14 09:48:20 +02:00
Anton 496ade309c Step rearranging fixes [SCI-6970] 2022-07-13 15:17:32 +02:00
artoscinote 3d2e835268
DOCX layout improvements [SCI-6857] (#4160) 2022-07-13 12:52:56 +02:00
Oleksii Kriuchykhin 747e88fafc Fix file upload and edit interactions on steps page [SCI-6969] 2022-07-12 15:24:12 +02:00
ajugo 7b525e5986
Fix en.yml [SCI-5319] (#4225) 2022-07-12 10:33:37 +02:00
artoscinote dd27fadd98
Add step reordering and step element reordering service endpoints to API [SCI-6891][SCI-6892] (#4179) 
* Add step reordering service endpoint to API [SCI-6891]

* Generalize reorder validation [SCI-6891]

* Add endpoint for reordering step elements, fix issues [SCI-6892]

* Add appropriate serializers [SCI-6891][SCI-6892]

* Add step elements to step serializer [SCI-6891]

* Simplify routes, add locking [SCI-6891]
 2022-07-12 10:13:47 +02:00
ajugo 4db46eac44
Fix linked protocol naming and i flyout [SCI-6963] (#4213) 2022-07-11 11:29:05 +02:00
artoscinote a51ce1c322
Fix text field error states [SCI-6952] (#4216) 2022-07-11 10:44:27 +02:00
Oleksii Kriuchykhin d0d528aeac Update inventory global sharing logic to use new user assignments [SCI-6947] 2022-07-07 22:31:07 +02:00
Anton 4e2cb29f48 Fix step complete and name editing [SCI-6949] 2022-07-07 14:33:38 +02:00
Alex Kriuchykhin 26820b9abb
Fix subject references for repository row activities [SCI-6906] (#4203) 2022-07-07 12:00:35 +02:00
Alex Kriuchykhin a7e88e59bd
Update global search to use new step text elements [SCI-6873] (#4165) 2022-07-06 14:20:55 +02:00
artoscinote c9e7e68369
Insert element dropdown fixes [SCI-6925] (#4184) 
* Insert element dropdown fixes [SCI-6925]

* Dropdown bugfix, rounder CSS size [SCI-6925]
 2022-07-06 14:11:48 +02:00
Martin Artnik 910c36af08 Merge branch 'features/step-editing-improvements' into develop 2022-07-05 10:12:10 +02:00
Oleksii Kriuchykhin 3fbc5af9a1 Convert team_repository to polymorphic relation [SCI-6917] 2022-06-29 15:22:22 +02:00
artoscinote b880f6fc39
Add API endpoints for step texts [SCI-6889] (#4173) 2022-06-27 12:30:45 +02:00
aignatov-bio de626acd7f
Merge pull request #4169 from aignatov-bio/ai-sci-6853-fix-new-acitvities 
Fix new step activities [SCI-6893]
 2022-06-27 11:14:21 +02:00
aignatov-bio bd1f65c811
Merge pull request #4171 from aignatov-bio/ai-sci-6921-add-delete-all-button 
Add delete all steps button [SCI-6921]
 2022-06-27 11:13:06 +02:00
Anton 1863e031c5 PDF report fixes [SCI-6924] 2022-06-24 14:38:24 +02:00
Anton 5296b50c2f Add delete all steps button [SCI-6921] 2022-06-24 11:21:47 +02:00
Anton 8ce0490e9a Fix new step activities [SCI-6853] 2022-06-22 14:16:01 +02:00
ajugo a5065b82cb
Show error for broken file in repository row [SCI-6838] (#4146) 2022-06-08 13:35:06 +02:00
Anton e86a0610b2 Add metadata block in protocol repository [SCI-6869] 2022-06-06 13:56:22 +02:00
Anton 3910fa34f3 Remove protocol creation modal [SCI-6868] 2022-06-03 15:11:51 +02:00
ajugo 9d4c97f191
Add task assignment API [SCI-6846] (#4123) 
* Add user assignment to task API [SCI-6846]

* Add test for task assignments [SCI-6846]
 2022-06-03 10:09:42 +02:00
Martin Artnik 9abbe22c26 Merge branch 'develop' into features/step-editing-improvements 2022-06-02 11:26:39 +02:00
aignatov-bio 6b4a3f2651
Merge pull request #4130 from aignatov-bio/ai-sci-6856-update-pdf-report 
Update PDF report layout [SCI-6856]
 2022-06-02 11:18:16 +02:00
artoscinote ab5cb19d6e
Add step activities, fix checklists [SCI-6852] (#4136) 
* Add step activities, fix checklists [SCI-6852]

* Linter fix [SCI-6852]
 2022-06-02 11:15:32 +02:00
aignatov-bio cd7ca54610
Merge pull request #4135 from aignatov-bio/ai-sci-6865-add-step-text-option-to-report-wizard 
Add step text option to report wizard [SCI-6865]
 2022-06-02 11:06:48 +02:00
Anton 61464b3780 Add new protocol view to repository [SCI-6858] 2022-06-02 11:05:25 +02:00
Anton 08e7ea3014 Add step text option to report wizard [SCI-6865] 2022-06-01 15:53:40 +02:00
artoscinote 98d66a3276
Implement reordering activities [SCI-6851] (#4129) 
* Implement reordering activities [SCI-6851]

* Added asset activity types [SCI-SCI-6853]
 2022-06-01 12:30:09 +02:00
Anton b684841718 Update PDF report layout [SCI-6856] 2022-05-31 14:42:46 +02:00
artoscinote 3c63d9a3eb
CSS fix, routes fix [SCI-6844] (#4106) 2022-05-31 09:05:38 +02:00
artoscinote 23872f519b
Implement step element sorting modal [SCI-6849] (#4124) 
* Implement step element sorting modal [SCI-6849]

* Implement step reordering modal [SCI-6850]

* Refactor reorderable items a bit [SCI-6850]
 2022-05-30 13:45:51 +02:00
aignatov-bio 57408e9f4f
Merge pull request #4121 from aignatov-bio/ai-sci-6835-display-user-free-space 
Add the ability to show storage limit [SCI-6835]
 2022-05-26 15:03:45 +02:00
Anton 3983d920e9 Fix localization [SCI-6835] 2022-05-26 15:01:52 +02:00
artoscinote 894eb8932d
Implement checklist item ordering [SCI-6847] (#4119) 2022-05-26 14:02:02 +02:00
ajugo e3c337aa3d
Renaming settings section and remove caching for Settings class [SCI-5625] (#4100) 
* Renaming settings section and remove caching for Settings class [SCI-5625]

* Code fix for setting model [SCI-5625]

* Clean code [SCI-5625]
 2022-05-26 13:27:18 +02:00
ajugo 054ce72d25
Add handle for going over storage limit for inventories [SCI-6604] (#4120) 2022-05-26 13:19:38 +02:00
Anton 2ee5a31d3d Add dropable area to step [SCI-6814] 2022-05-26 12:57:12 +02:00
Anton 7bc5c622a7 Add comments to step [SCI-6837] 2022-05-25 15:06:12 +02:00
ajugo bacb1547f2
Changed clone permissions and UI changes for experiment actions [SCI-6756] (#4074) 2022-05-25 10:22:50 +02:00
artoscinote 6c797f5825
Integrate WOPI file modal with new steps [SCI-6830] (#4111) 2022-05-24 11:13:47 +02:00
Oleksii Kriuchykhin c120a357cd Add permissions for Report model [SCI-6834] 2022-05-24 10:59:21 +02:00
Oleksii Kriuchykhin 6febad1b95 Update the exiting permissions helpers so they will check new permissions [SCI-6821] 2022-05-24 10:49:49 +02:00
Alex Kriuchykhin 679b29b32d
Merge pull request #4099 from okriuchykhin/ok_SCI_6820 
Add migration for user team roles, including protocols and inventories [SCI-6820]
 2022-05-24 10:33:35 +02:00
Oleksii Kriuchykhin 39cfcd5522 Add migration for user team roles, including protocols and inventories [SCI-6820] 2022-05-23 16:28:53 +02:00
Anton a494051f61 Add placeholder for new files in step [SCI-6833] 2022-05-23 13:44:34 +02:00
Anton 5a275aaeae Move attachments to separate component 2022-05-19 11:16:50 +02:00
ajugo 90db2bace9
API endpoint to generate with ELN data for Validaide [SCI-6663][SCI-6798] (#4012) 
* Manuscript JSON data SCI-6663

* Clean code for generate manuscript data [SCI-6663]

* Include project data into json [SCI-6663]

* Fix hound [SCI-6663]

* Fix hound [SCI-6663]

* Remove manuscript naming [SCI-6663]

* Add local storage assets capabilites [SCI-6663]

* Rename project [SCI-6663]

* Enable multple projects and clean input [SCI-6798]

* Fix hound [SCI-6798]
 2022-05-19 09:08:05 +02:00
Oleksii Kriuchykhin cac33bed25 Update user invitations with new user roles [SCI-6823] 2022-05-19 09:04:25 +02:00
Anton 9cd0e010a6 Add file upload logic [SCI-6829] 2022-05-19 08:54:22 +02:00
Anton 134558355d Add file modal [SCI-6828] 2022-05-18 11:12:53 +02:00
ajugo e8d7fa50b8
Enable smart annotation notifcation at consumption and some rewording [SCI-6802] (#4094) 2022-05-17 11:41:53 +02:00
Oleksii Kriuchykhin c397616106 Add teams, protocols and inventories specific permission definitions [SCI-6819] 2022-05-16 11:10:19 +02:00
Anton 940b0ea744 Add general layout for step attachments [SCI-6811] 2022-05-12 12:26:50 +02:00
artoscinote b486f3fd31
Implement checklists [SCI-6789] (#4089) 2022-05-11 15:51:26 +02:00
Anton 24d68da455 Fix tinymce assets for steps [SCI-6809] 2022-05-11 13:01:23 +02:00
Anton c0660d0243 Small fixes [SCI-6808] 2022-05-11 11:32:27 +02:00
Anton 04e16cf6b5 Add text component [SCI-6808] 2022-05-11 09:51:47 +02:00
aignatov-bio d07daa73cb
Merge pull request #4072 from aignatov-bio/ai-sci-6781-add-confirmation-modal-for-step-deletion 
Add delete step modal [SCI-6781]
 2022-05-10 13:28:47 +02:00
Oleksii Kriuchykhin e957d7d35e Improve loading time of canvas view/edit [SCI-6797] 2022-05-09 11:40:31 +02:00
Anton 252680f0a1 Add table component [SCI-6777] 2022-05-06 12:09:54 +02:00
artoscinote b00968fd55
Implement basic checklist functionality [SCI-6786] (#4073) 
* Implement protocol status bar functionality [SCI-6760]

* Inline edit interactions, checklist name edit improvements [SCI-6786]
 2022-05-05 12:56:31 +02:00
Anton 277e202c90 Add delete step modal [SCI-6781] 2022-05-04 15:57:13 +02:00
artoscinote 5454aa26bc
Implement protocol status bar functionality [SCI-6760] (#4070) 2022-05-04 11:49:57 +02:00
Anton 3b60c62c79 Refactor modal loading [SCI-6780] 2022-05-04 10:36:13 +02:00
Anton e06b398bb4 Add delete action for step components [SCI-6780] 2022-05-03 15:21:47 +02:00
artoscinote 6352a4dd04
Implement protocol options dropdown [SCI-6750, SCI-6751] (#4066) 
* Implement protocol options dropdown [SCI-6750, SCI-6751]

* Implement simple API error handling for step status update [SCI-6354]
 2022-05-03 15:18:48 +02:00
Anton 6a827022f6 Add insert step element dropdown [SCI-6758] 2022-05-03 13:22:26 +02:00
artoscinote ac45edb14c
Added validations for date(time) column reminder [SCI-6775] (#4063) 2022-04-28 15:30:20 +02:00
Anton 98efcc04b5 Small CSS fixes for repository [SCI-6767] 2022-04-28 14:32:34 +02:00
artoscinote 8aaab73856
Add inline edit component, protocol name updates [SCI-6749] (#4057) 2022-04-26 14:13:17 +02:00
aignatov-bio 3d78559559
Merge pull request #4047 from aignatov-bio/ai-sci-6754-add-creation-step-functionality 
Add step creation/deletion functionality [SCI-6754]
 2022-04-25 12:46:33 +02:00
aignatov-bio 957e79f46a
Merge pull request #4051 from aignatov-bio/ai-sci-6743-add-newgative-validation-for-treshold 
Add negative validation for threshold [SCI-6743]
 2022-04-25 12:46:20 +02:00
Anton ba3c73439a Add step creation/deletion functionality [SCI-6754] 2022-04-25 12:40:14 +02:00
artoscinote e4b5389acf
Copy fix [SCI-6762] (#4048) 2022-04-25 12:18:50 +02:00
Anton b56f11fc18 Add negative validation for treshold [SCI-6743] 2022-04-25 12:18:22 +02:00
Alex Kriuchykhin e15a382e37
Merge pull request #4032 from okriuchykhin/ok_SCI_6712 
Add models for step orderable elements, migrate step descriptions [SCI-6712]
 2022-04-22 09:33:41 +02:00
artoscinote 6ef190f353
Basic Vue setup for protocols [SCI-6749] (#4044) 2022-04-21 15:12:34 +02:00
Anton fd736f99c1 Add comment to repository stock activities [SCI-6746] 2022-04-20 11:29:16 +02:00
ajugo 54474b2bba
API GET repository stock column output fix [SCI-6550] (#4030) 
* Add include stock unit items to Stock column get [SCI-6550]

* Fix stock column test [SCI-6550]

* Fix hound [SCI-6550]
 2022-04-19 16:05:17 +02:00
Oleksii Kriuchykhin 5a17ad6be9 Add models for step orderable elements, migrate step descriptions [SCI-6712] 2022-04-19 13:26:13 +02:00
Anton 2481ba566a Add edit title for stock consumption modal [SCI-6731] 2022-04-15 11:47:49 +02:00
aignatov-bio 4a232ac391
Merge pull request #4020 from biosistemika/features/projects-experiments-pagination 
Features/projects experiments pagination
 2022-04-14 10:45:27 +02:00
Anton d091c56e9f Add pagination for experiments [SCI-6656] 2022-04-12 15:16:02 +02:00
artoscinote 83ac50c57d
Add repository snapshot error modal [SCI-6613] (#3993) 2022-04-12 13:29:11 +02:00
artoscinote 2d811cdc4c
Add snapshot error message below task status [SCI-6614] (#4009) 2022-04-12 13:28:26 +02:00
ajugo 0a5e93a018
API: add endpoint for creating stock column [SCI-6550] (#3956) 
* Add test for repositoty stock column api [SCI-6550]

* Create and update stock column [SCI-6550]

* Change stock unit [SCI-6550]

* Fix hound [SCI-6550]

* Fix on delete [SCI-6550]

* Fix houd [SCI-6550]
 2022-04-08 14:09:00 +02:00
aignatov-bio 3a4cab9d0a
Stock modal UX fixes [SCI-6714] (#3998) 
Co-authored-by: Anton <anton@scinote.net>
 2022-04-08 11:09:37 +02:00
artoscinote 5effe34221
Add reminder preset to date(time) reminders [SCI-6693] (#3996) 2022-04-07 12:27:21 +02:00
Anton d96103d714 Add pagination to projects list [SCI-6655] 2022-04-07 12:22:52 +02:00
artoscinote 73757c4820
Added styling for failed snapshots in sidebar [SCI-6636] (#3990) 
* Added styling for failed snapshots in sidebar [SCI-6636]

* Simplify markup for failed icon [SCI-6636]
 2022-04-05 15:45:49 +02:00
artoscinote 785ff4152e
Stock column management UX/UI fixes [SCI-6674] (#3979) 2022-04-05 10:30:06 +02:00
artoscinote 8d25f456d1
Add basic validation to reminder value to prevent integer overflow errors [SCI-6693] (#3986) 2022-04-04 12:09:41 +02:00
ajugo bb44152d54
Fix assigning and consuming items [SCI-6686] (#3985) 2022-04-04 11:07:46 +02:00
artoscinote 401a32edd9
Implement failed snapshot pop-up on task screen [SCI-6612] (#3950) 
* Implement failed snapshot pop-up on task screen [SCI-6612]

* Copy change [SCI-6612]

* Proper handling of snapshot transition error [SCI-6612]

* Move modal auto open logic to JS file [SCI-6612]

* Remove unnecessary .html_safe [SCI-6612]
 2022-04-04 11:04:03 +02:00
aignatov-bio b6e34266f9
Update repository card view for stock [SCI-6685] (#3982) 
Co-authored-by: Anton <anton@scinote.net>
 2022-04-01 13:59:44 +02:00
aignatov-bio a32dd54a6e
Toolbar fixes [SCI-6670] (#3973) 
Co-authored-by: Anton <anton@scinote.net>
 2022-03-31 14:04:00 +02:00
artoscinote 229a27750f
Implement stock consumption via the API [SCI-6642] (#3964) 
* Implement stock consumption via the API [SCI-6642]

* Remove unnecessary attribute from InventoryItemSerializer [SCI-6642]

* Amend permission check, add nested transaction support to consume_stock method [SCI-6642]
 2022-03-30 14:33:26 +02:00
aignatov-bio ca53c3058a
Stock modal bugs [SCI-6667] (#3970) 
Co-authored-by: Anton <anton@scinote.net>
 2022-03-30 14:03:07 +02:00
Martin Artnik 45a325e824 Merge branch 'develop' into features/stock-management 2022-03-30 11:10:40 +02:00
ajugo 5cc97122e5
Viewer role does not see any tasks in archived project [SCI-6616] (#3958) 
* Fix viewer role not see any tasks in archived project [SCI-6616]

* Fix rollback for add read archive permission migration [SCI-6616]
 2022-03-30 11:01:26 +02:00
artoscinote 36fbfcab2f
Implement hide all repository reminders button [SCI-6505] (#3940) 2022-03-30 10:54:55 +02:00
aignatov-bio 103e20ee9a
Update front end validation for columns managment [SCI-6657] (#3962) 
Co-authored-by: Anton <anton@scinote.net>
 2022-03-28 21:31:49 +02:00
aignatov-bio 673f8c1a2a
Fix multiple stock bugs [SCI-6651] (#3959) 
Co-authored-by: Anton <anton@scinote.net>
 2022-03-28 12:43:09 +02:00
aignatov-bio 004aeda601
Add stock filters [SCI-6547] (#3938) 
Co-authored-by: Anton <anton@scinote.net>
 2022-03-23 10:05:07 +01:00
ajugo 7cba738a9b
Date remidner flyout [SCI-6503] (#3937) 
* Implement date reminder flyout [SCI-6503]

* Show only days left for date reminder [SCI-6503]

* Pluralize day in reminders [SCI-6503]

* Create partials for different reminders [SCI-6503]

* Unify css for reminder [SCI-6503]
 2022-03-22 13:33:58 +01:00
Alex Kriuchykhin 91c97f1dea
Change env variable name for s3 bucket region [SCI-6603] (#3944) 2022-03-18 15:05:55 +01:00
artoscinote 297cd02da7
Handle locked stock consumption state [SCI-6608] (#3942) 2022-03-18 15:02:15 +01:00
aignatov-bio 0cfedb2155
Add datetime reminders to columns modal [SCI-6556] (#3934) 
Co-authored-by: Anton <anton@scinote.net>
 2022-03-18 14:40:09 +01:00
aignatov-bio fecaafecf9
Refactor repository toolbar [SCI-6545] (#3943) 
Co-authored-by: Anton <anton@scinote.net>
 2022-03-18 14:10:34 +01:00
ajugo d1610fba53
Low stock flyout reminders [SCI-6502] (#3932) 
* Display low stock flyout reminder [SCI-6502]

* Display low stock flyout reminder [SCI-6502]

* Adapt showing stock reminders for every bell icon click [SCI-6502]

* Correct hound error [SCI-6502]

* Fix event registration for fetching reminder data [SCI-6502]

* Fix event registration for fetching reminder data [SCI-6502]

* Fix hound [SCI-6502]

* Remove not needed line [SCI-6502]

* Add reminder template [SCI-6502]

* Add clearing messages [SCI-6502]
 2022-03-15 10:24:35 +01:00
Anton 8b8e2c6d92 Merge branch 'develop' into features/stock-management 2022-03-14 11:56:38 +01:00
artoscinote 35dfa15e57
Implement hidden repository cell reminders [SCI-6504] (#3933) 2022-03-11 12:38:45 +01:00
ajugo 959b86b40c
Task inventory activity for assigned item consumption [SCI-6453] (#3830) 
* Add task inventory activity [SCI-6453]
 2022-03-09 18:43:38 +01:00
aignatov-bio 10743921d4
Add reminders to stock modal [SCI-6557] (#3917) 
Co-authored-by: Anton <anton@scinote.net>
 2022-03-09 14:19:15 +01:00
artoscinote d577fcc824
Implement basic logic for Date/DateTime/Stock reminders [SCI-6554] (#3911) 
* Implement basic logic for Date/DateTime/Stock reminders [SCI-6554]

* Implement bell icon [SCI-6500]

* Refactor reminder cells scope [SCI-6554]
 2022-03-09 14:13:48 +01:00
artoscinote f9a8358d72
Fix archived column hiding issue in snapshots, fix typos [SCI-6589] (#3915) 2022-03-03 13:52:56 +01:00
Alex Kriuchykhin bd47893947
Add inventory archiving to the API [SCI-5584] (#3885) 2022-02-28 10:33:43 +01:00
Alex Kriuchykhin dd5939e89d
Fix advanced filters for ID and Name columns [SCI-6496] (#3865) 2022-02-22 14:49:17 +01:00
aignatov-bio 10821edbba
Update datetime filters operators [SCI-6544] (#3873) 
Co-authored-by: Anton <anton@scinote.net>
 2022-02-18 11:16:53 +01:00
Alex Kriuchykhin c39c767241
Update message for empty result for archived items [SCI-6532] (#3867) 2022-02-17 15:26:09 +01:00
aignatov-bio 6cee35dfa5
Small ux fixes [SCI-6539][SCI-6516] (#3864) 
Co-authored-by: Anton <anton@scinote.net>
 2022-02-16 12:56:54 +01:00
aignatov-bio f2e4c579af
Multiple UX fixes for filters [SCI-6525] (#3858) 
Co-authored-by: Anton <anton@scinote.net>
 2022-02-15 15:03:25 +01:00
Alex Kriuchykhin 0ce6f43cbf
Fix inventory table custom error messages [SCI-6532] (#3855) 2022-02-15 14:37:26 +01:00
aignatov-bio afce0e34c4
Fix css for saved filters dropdown [SCI-6516] (#3843) 
Co-authored-by: Anton <anton@scinote.net>
 2022-02-11 12:44:22 +01:00
Alex Kriuchykhin ed8ba13525
Fix advanced search for file type columns [SCI-6518] (#3839) 2022-02-11 10:47:32 +01:00
artoscinote bc5822de7b
Added error messges for missing search columns/values [SCI-6483] (#3824) 
* Added error messges for missing search columns/values [SCI-6483]
 2022-02-11 10:24:29 +01:00
aignatov-bio e59b18e25d
Add default selection for filters [SCI-6484] (#3826) 
Co-authored-by: Anton <anton@scinote.net>
 2022-02-10 20:58:44 +01:00
aignatov-bio 8604319c1b
Add front-end validation for comments field [SCI-6464] (#3829) 
Co-authored-by: Anton <anton@scinote.net>
 2022-02-10 10:55:58 +01:00
Alex Kriuchykhin 4627d15fc3
Implement import for repository stock values [SCI-6461] (#3818) 2022-02-04 10:29:48 +01:00
artoscinote f1e04cc604
Fix appearance of members pagination, copy fix [SCI-6265] (#3792) 2022-02-02 10:41:29 +01:00
artoscinote cdbf1f5fa0
Implement stock management activities [SCI-6452] (#3810) 
* Implement stock management activities [SCI-6452]

* PR code fixes [SCI-6452]
 2022-02-02 10:33:02 +01:00
Alex Kriuchykhin 3c165996fa
Fix table names in advanced filters configuration [SCI-6467] (#3814) 2022-02-02 10:26:43 +01:00
aignatov-bio 0d6b2ad4b4
Add searchable list for advanced filters [SCI-6466] (#3808) 
Co-authored-by: Anton <anton@scinote.net>
 2022-02-01 14:39:04 +01:00
Alex Kriuchykhin c1972e4fb2
Fix advanced filtering with multiple filters [SCI-6471] (#3807) 2022-01-31 11:10:39 +01:00
aignatov-bio c8784d1f66
Add advanced filters for date/datetime/time range [SCI-6462] (#3806) 
Co-authored-by: Anton <anton@scinote.net>
 2022-01-31 09:21:08 +01:00
Oleksii Kriuchykhin dd5f8c2793 Add stock management columns to snapshots [SCI-6448] 2022-01-28 13:19:37 +01:00
aignatov-bio 2c88843924
Task stock consumption modal[SCI-6444][SCI-6445] (#3798) 
Add main logic for consumption on task [SCI-6444]

Co-authored-by: Anton <anton@scinote.net>
 2022-01-28 11:10:56 +01:00
artoscinote d779f352a7
Merge pull request #3796 from biosistemika/features/repository-filters 
Features/repository filters
 2022-01-26 10:36:30 +01:00
aignatov-bio 371d5f0636
Add current/new amount section to stock [SCI-6416] (#3791) 
Co-authored-by: Anton <anton@scinote.net>
 2022-01-26 10:28:43 +01:00
Alex Kriuchykhin e55c9ec1cc
Merge pull request #3785 from okriuchykhin/ok_SCI_6423 
Fix filtering for repository snapshots [SCI-6423]
 2022-01-25 12:59:46 +01:00
artoscinote 42a537390e
Group public users in experiments and tasks [SCI-6332] (#3769) 
* Group public users in experiments and tasks [SCI-6332]

* Add list of users to the public users group elements [SCI-6404]
 2022-01-25 12:41:36 +01:00
artoscinote 4ede001cf1
Added UPDATE_STOCK_CONSUMPTION to MyModule permissons [SCI-6418] (#3781) 
* Fix invalid return in reports jobs [SCI-6409] (#3777)

* Added UPDATE_STOCK_CONSUMPTION to MyModule permissons [SCI-6418]
 2022-01-25 12:41:16 +01:00
artoscinote 790451c96f
Various fixes for BMT search [SCI-6077] (#3673) 
* Various fixes for BMT search [SCI-6077]

* Add vue linter support [SCI-6077]
 2022-01-25 12:28:38 +01:00
Alex Kriuchykhin d2b5db13e9
Add stock and consumption to assigned items section [SCI-6434] (#3793) 2022-01-25 12:12:55 +01:00
Martin Artnik 711005425f Merge branch 'features/bmt-search' of github.com:biosistemika/scinote-web into features/repository-filters 2022-01-20 13:30:33 +01:00
Martin Artnik abac837cd4 Merge branch 'develop' of github.com:biosistemika/scinote-web into features/repository-filters 2022-01-20 13:26:08 +01:00
artoscinote 95a36b6870
Implemented stock management modal [SCI-6417] (#3788) 
* Implement inventory stock management modal [SCI-6417]

* Add generalized validation mechanic, some bugfixes [SCI-6417]

* Fix permission check and method name in RepositoryStockValue [SCI-6417]
 2022-01-20 12:44:57 +01:00
aignatov-bio 05547da457
Add stock table renders [SCI-6412] (#3787) 
Co-authored-by: Anton <anton@scinote.net>
 2022-01-19 13:19:56 +01:00
aignatov-bio 01f1b5bd10
Add stock column type (#3786) 
* Add stock column type

* Create new stock column [SCI-6410]

* Small fixed for stock column [SCI-6410]

* Add stock column validations [SCI-6410]

Co-authored-by: Anton <anton@scinote.net>
 2022-01-18 13:17:05 +01:00
Oleksii Kriuchykhin 34554e57e3 Fix filtering for repository snapshots [SCI-6423] 2022-01-17 21:53:13 +01:00
Oleksii Kriuchykhin 7aeeb81fb7 Update Ruby to 2.7.5, optimize Rails configuration, update Puma and Wkhtmltopdf [SCI-6403] 2022-01-07 11:20:11 +01:00
artoscinote 3f87d250ce
Implement saving repository filters [SCI-6230] (#3748) 
* Implement saving repository filters [SCI-6230]

* Remove unnecessary logging [SCI-6230]

* Refactor filter saving [SCI-6230]

* Remove unnecessary files, linter fixes [SCI_6230]
 2022-01-05 15:02:09 +01:00
aignatov-bio 3bef5e2caa
Update wording for repository columns [SCI-6233] (#3752) 
Co-authored-by: Anton <anton@scinote.net>
 2022-01-03 10:33:28 +01:00
Martin Artnik ef0fec55df Filter fixes [SCI-6391] 2021-12-27 11:36:39 +01:00
Martin Artnik 8651c87efd Add missing translations for webhook form [SCI-6193] 2021-12-23 11:45:14 +01:00
Oleksii Kriuchykhin 738da6094f Add advanced filters to repository datatable service [SCI-6210] 2021-12-21 12:38:52 +01:00
Martin Artnik c9e4a9bab7 Merge branch 'master' into features/bmt-search 2021-12-20 13:08:20 +01:00
Martin Artnik 55905310a6 Added filter parameter formatting [SCI-6229] 2021-12-16 14:40:36 +01:00
aignatov-bio 7bcf7a7943
Fix conflicts and update localizations [SCI-6227] (#3733) 
Co-authored-by: Anton <anton@scinote.net>
 2021-12-15 15:16:12 +01:00
aignatov-bio ac8fdb95d6
Add filters for checklist and status [SCI-6225][SCI-6226] (#3732) 
Co-authored-by: Anton <anton@scinote.net>
 2021-12-15 12:31:32 +01:00
aignatov-bio 8ce321456e
Add time filter [SCI-6217] (#3738) 
* Add time filter [SCI-6217]

* Add datetime filter for inventory [SCI-6220]

* Refactor components structure

Co-authored-by: Anton <anton@scinote.net>
 2021-12-15 12:22:24 +01:00
Oleksii Kriuchykhin c56a088ad9 Improve database and Okta config [SCI-6184] 2021-12-13 10:29:28 +01:00
Alex Kriuchykhin 37b21f1b62
Merge pull request #3715 from okriuchykhin/ok_SCI_6209 
Add models and controller for repository table filters [SCI-6209]
 2021-12-10 15:45:08 +01:00
artoscinote e08857886a
Implement date type filter [SCI-6216] (#3729) 
Co-authored-by: aignatov-bio <47317017+aignatov-bio@users.noreply.github.com>
 2021-12-10 14:12:06 +01:00
aignatov-bio c7af5b322b
Add drodown filter [SCI-6224] (#3728) 
Co-authored-by: Anton <anton@scinote.net>
 2021-12-07 20:49:48 +01:00
aignatov-bio 00f30b8d6c
Add assigned tasks filters [SCI-6221] (#3726) 
* Add endpoint for repository tasks [SCI-6221]

* Add assigned tasks filter [SCI-6221]

Co-authored-by: Anton <anton@scinote.net>
 2021-12-07 15:28:20 +01:00
artoscinote 561746158e
Further fix scoping of table styles [SCI-6315] (#3720) 2021-12-06 10:40:08 +01:00
aignatov-bio e4606abf3e
Add basic structure for text filter [SCI-6213][SCI-6214] (#3710) 
* Add basic structure for text filter [SCI-6213]

* Add actions for text filter [SCI-6213]

* Add mixins and i18n [SCI-6213]

* Add number filters [SCI-6214]

* Fix operator values

Co-authored-by: Anton <anton@scinote.net>
 2021-12-03 14:50:27 +01:00
Oleksii Kriuchykhin a8ad7ef826 Add models and controller for repository table filters [SCI-6209] 2021-12-02 14:25:23 +01:00
artoscinote 78ab094bf2
Implement public user grouping, deletion and updates to manually assigned [SCI-6228] (#3701) 
* Implement public user grouping, deletion and updates to manually assigned [SCI-6228]

* PR fixes [SCI-6228]

* Permission check improvement [SCI-6228]
 2021-12-01 16:23:24 +01:00
Alex Kriuchykhin a58400bec9
Merge pull request #3692 from okriuchykhin/ok_SCI_6208 
Add endpoint for fetching column data including connected items [SCI-6208]
 2021-12-01 13:13:03 +01:00
artoscinote f1ede0f439
Add asset filter type [SCI-6215] (#3711) 2021-12-01 11:24:34 +01:00
aignatov-bio 850b164724
Update error handling for experiment move [SCI-6293] (#3703) 
Co-authored-by: Anton <anton@scinote.net>
 2021-12-01 11:24:01 +01:00
artoscinote 9652362c46
Fix remove user from project notification [SCI-6264] (#3708) 2021-12-01 11:17:07 +01:00
artoscinote 9937d1d913
Add print feature to protocols [SCI-6028] (#3700) 
* Add print feature to protocols [SCI-6028]

* Close tab after closing print dialog [SCI-6028]

* CSS linter fixes [SCI-6028]
 2021-12-01 11:16:45 +01:00
artoscinote 16b3ee3d94
Add non-cyclical validation to connections [SCI-6287] (#3702) 
* Add non-cyclical validation to connections [SCI-6287]

* Prevent theoretical infinite loop possiblity [SCI-6287]
 2021-12-01 11:14:01 +01:00
aignatov-bio 12fadb9c25
Add basic structure for repository filters [SCI-6211] (#3698) 
* Add container for inventory filters [SCI-6211]

* Add basic structure for filters [SCI-6211]

* Add i18n and css for filters dropdown [SCI-6211]

* Fix markup

Co-authored-by: Anton <anton@scinote.net>
 2021-11-25 20:34:22 +01:00
Oleksii Kriuchykhin a1c4d06e3e Add endpoint for fetching column data including connected items [SCI-6208] 2021-11-22 22:48:36 +01:00
Anton a44dd8c915 Merge branch 'features/bmt-search' into features/repository-filters 2021-11-22 14:24:28 +01:00
artoscinote 9b06a24288
Added granular task permissions, permission check fixes [SCI-6278] (#3683) 2021-11-19 13:24:57 +01:00
Alex Kriuchykhin ebfd2f7924
Merge pull request #3682 from okriuchykhin/ok_SCI_6088 
Add API endpoint for Cloning Experiments [SCI-6088]
 2021-11-18 15:26:19 +01:00
aignatov-bio c22ff3acc8
Fix technician role permission for results [SCI-6276] (#3681) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-18 15:01:29 +01:00
Alex Kriuchykhin 2104bc489a
Merge pull request #3678 from okriuchykhin/ok_SCI_6275 
Fix permissions check for steps completion in the API [SCI-6275]
 2021-11-18 14:11:03 +01:00
Oleksii Kriuchykhin b35c283cc5 Fix permissions check for steps completion in the API [SCI-6275] 2021-11-17 21:25:31 +01:00
artoscinote 6b6a49428c
Add additional info to API project_user_assignments type error [SCI-6273] (#3674) 
* Add additional info to API project_user_assignments type error [SCI-6273]

* Generalize user_assignments api controllers [SCI-6237]
 2021-11-17 16:28:02 +01:00
aignatov-bio 2141589797
Fix typo in assign permission modal [SCI-6274] (#3676) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-17 14:52:24 +01:00
artoscinote 2e84418304
Add create/destroy endpoints to connections API, add tests [SCI-6087] (#3563) 2021-11-17 12:11:22 +01:00
Anton c00a7b7b8f Update bmt filters default state [SCI-6090] 2021-11-16 15:14:00 +01:00
aignatov-bio 06788bfeb6
Update CSS for BMT filters [SCI-6084] (#3652) 
* Update css for bmt filters [SCI-6084]

* Create shared component for dropdown [SCI-6084]

Co-authored-by: Anton <anton@scinote.net>
 2021-11-16 14:46:08 +01:00
artoscinote d08882e7f2
Style and copy fix [SCI-6272] (#3670) 2021-11-16 11:25:47 +01:00
artoscinote 22623c821d
Fixed creating public projects on API, added missing translations [SCI-6167] (#3666) 2021-11-15 15:36:38 +01:00
aignatov-bio 8f9ab4f6c3
Refactor permissions breadcrumbs for users [SCI-6260] (#3665) 
* Refactor permissions breadcrumbs for users [SCI-6260]

* Change creator assignments to automatically [SCI-6260]

Co-authored-by: Anton <anton@scinote.net>
 2021-11-15 15:02:22 +01:00
artoscinote 6e65433c8d
Add missing translation [SCI-6248] (#3664) 2021-11-15 13:25:49 +01:00
artoscinote 4ce0c53d36
Implemented reset role functionality [SCI-6261] (#3662) 
* Implemented reset role functionality [SCI-6261]

* Linter fixes [SCI-6261]
 2021-11-15 11:12:31 +01:00
artoscinote a6c61c2b4e
Fixed permission issues when moving experiment [SCI-6257] (#3655) 
* Fixed permission issues when moving experiment [SCI-6257]

* Copy fixes [SCI-6248]

* Use canaid helper instead of permission_granted [SCI-6257]

* Fixes [SCI-6257]
 2021-11-12 12:59:49 +01:00
Oleksii Kriuchykhin f73f9dd2c1 Fix activities for assigning to experiments and tasks [SCI-6254] 2021-11-11 21:30:30 +01:00
artoscinote 9f92cfab1a
Fixed access modal styling issues [SCI-6241] (#3646) 
* Fixed access modal styling issues [SCI-6241]

* Refactor user access list to use flex [SCI-6241]

* Linter fixes [SCI-6241]
 2021-11-10 11:40:41 +01:00
aignatov-bio d3e178e5a2
Small CSS fixes for permissions [SCI-6207] (#3638) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-09 09:26:22 +01:00
Alex Kriuchykhin 0a8af99368
Merge pull request #3627 from okriuchykhin/ok_SCI_6184 
Add support of Okta SSO provider [SCI-6184]
 2021-11-08 15:01:16 +01:00
artoscinote 3e3e2cc24e
Revert "Implement experiment and task access removal" [SCI-6218] (#3635) 
* Revert "Implement experiment and task access removal [SCI-6156] (#3614)"

This reverts commit 2abefd78e6.

* Rename assign to module activity to designate to my module [SCI-6218]
 2021-11-05 15:44:14 +01:00
aignatov-bio 1ef9ea2cbb
Fix roles permission and helper [SCI-6198][SCI-6181] (#3630) 
Co-authored-by: Anton <anton@scinote.net>
 2021-11-04 13:29:34 +01:00
Oleksii Kriuchykhin 47b8347ce6 Add support of Okta SSO provider [SCI-6184] 2021-11-02 16:19:56 +01:00
Oleksii Kriuchykhin a99599efea Merge branch 'features/new_permissions' into develop 2021-10-29 15:16:30 +02:00
artoscinote 1bb30b2c49
Also move activities when moving experiment to another project [SCI-6047] (#3535) 
* Also move activities when moving experiment to another project [SCI-6047]

* Changed update to update! [SCI-6047]
 2021-10-28 16:35:47 +02:00
artoscinote 2abefd78e6
Implement experiment and task access removal [SCI-6156] (#3614) 2021-10-28 16:32:05 +02:00
artoscinote 6f2d883706
Added permissions specs for API, minor changes to permissions [SCI-6152] (#3609) 2021-10-28 14:48:28 +02:00
Alex Kriuchykhin 047f47a46a
Merge pull request #3617 from aignatov-bio/ai-sci-6181-update-permissions-on-task 
Small fixes on task permissions [SCI-6181]
 2021-10-28 14:46:57 +02:00
Alex Kriuchykhin f8e433a0ca
Merge branch 'features/new_permissions' into ok_SCI_6151 2021-10-28 14:31:47 +02:00