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Author SHA1 Message Date
Alex Kriuchykhin 62cec60b7c
Merge pull request #3277 from biosistemika/dependabot/bundler/rexml-3.2.5 
Bump rexml from 3.2.4 to 3.2.5
 2021-05-03 11:09:22 +02:00
dependabot[bot] 133c0fe196
Bump rexml from 3.2.4 to 3.2.5 
Bumps [rexml](https://github.com/ruby/rexml) from 3.2.4 to 3.2.5.
- [Release notes](https://github.com/ruby/rexml/releases)
- [Changelog](https://github.com/ruby/rexml/blob/master/NEWS.md)
- [Commits](https://github.com/ruby/rexml/compare/v3.2.4...v3.2.5)

Signed-off-by: dependabot[bot] <support@github.com>
 2021-04-30 21:11:42 +00:00
Alex Kriuchykhin 7a6446ba7a
Merge pull request #3217 from biosistemika/dependabot/npm_and_yarn/yargs-parser-5.0.1 
Bump yargs-parser from 5.0.0 to 5.0.1
 2021-04-29 17:04:18 +02:00
Miha Mencin b00f3972fc
Merge pull request #3265 from sevenpastnine/develop 
Add missing PostgreSQL variables to the docker-compose.production.yml
 2021-04-29 09:01:27 +02:00
Joh Dokler 1383c0ce3d Fix DATABASE_URL in the Makefile production config generator 2021-04-21 07:56:55 +02:00
Oleksii Kriuchykhin da2cea061a Bump version to 1.21.9 2021-04-20 17:38:42 +02:00
Miha Mencin 2b96d59d74
Merge pull request #3267 from okriuchykhin/ok_SCI_5541_v2 
Fix file name sanitization in PDF previewer [SCI-5541]
 2021-04-20 17:24:21 +02:00
Oleksii Kriuchykhin fab013b19b Fix file name sanitization in PDF previewer [SCI-5541] 2021-04-20 17:20:16 +02:00
Joh Dokler 86239e0782 Add missing PostgreSQL variables to the docker-compose.production.yml 2021-04-20 10:29:31 +02:00
Miha Mencin a6b2b23800
Bump version to 1.21.8 2021-04-19 08:53:34 +02:00
Alex Kriuchykhin 454a70605b
Merge pull request #3255 from biosistemika/SCI-5635 
[SCI-5635] Report not generated in case of tasks from more experiments
 2021-04-13 10:34:46 +02:00
miha 4c29de62be [SCI-5635] Use update_column in the migration in order to avoid callbacks 2021-04-13 10:28:41 +02:00
Miha Mencin 1713674f74
Merge pull request #3253 from biosistemika/SCI-5635 
SCI-5635  Report not generated in case of tasks from more experiments
 2021-04-12 14:39:59 +02:00
miha b6a4a5326f replace .find with .find_each 2021-04-12 13:57:03 +02:00
miha 4f7f257b78 Remove cascading save from step 2021-04-12 12:20:05 +02:00
miha 2e45093856 fix a stupid2 2021-04-12 10:31:35 +02:00
miha b917a0c3e0 fix a stupid 2021-04-12 10:30:37 +02:00
miha 56ebc3dc07 [SCI-5635] add a migration to fix broken steps, fix the api so it sets last_modified_by_id, minor step model refactor 
migration fix

remove the conditoin for set_last_modified_by callback

set the last_modified_by_id in before_save callback (in case it is not set yet)

remove trailing spaces

Set last modified in protocl import service
 2021-04-12 09:59:00 +02:00
Miha Mencin 79cae3536d
Bump version to 1.2.7 2021-04-07 07:39:43 +02:00
Miha Mencin e3ca50d2d0
Merge pull request #3246 from biosistemika/SCI-5631-order-the-inventory-results 
[SCI-5631] Add ordering to inventory item api endpoint
 2021-04-06 18:40:38 +02:00
Alex Kriuchykhin 020067a3f2
Merge pull request #3242 from biosistemika/dependabot/npm_and_yarn/y18n-3.2.2 
Bump y18n from 3.2.1 to 3.2.2
 2021-04-06 14:00:21 +02:00
Miha Mencin 1b7845b6b5
Merge pull request #3245 from aignatov-bio/ai-sci-5628-fix-css-for-repositories 
Fix css for repository header [SCI-5628]
 2021-04-06 10:28:56 +02:00
miha 961fa9ab4e [SCI-5631] Add ordering to index endpoint so pagination works, limit maximum page size for kaminari 2021-04-06 09:59:24 +02:00
aignatov-bio 5c4099af80 Fix css for repository header [SCI-5628] 2021-04-01 12:55:58 +02:00
Miha Mencin c0ff2865b5
Bump version to 1.21.6 2021-03-31 09:34:06 +02:00
dependabot[bot] 3bc3e654a7
Bump y18n from 3.2.1 to 3.2.2 
Bumps [y18n](https://github.com/yargs/y18n) from 3.2.1 to 3.2.2.
- [Release notes](https://github.com/yargs/y18n/releases)
- [Changelog](https://github.com/yargs/y18n/blob/master/CHANGELOG.md)
- [Commits](https://github.com/yargs/y18n/commits)

Signed-off-by: dependabot[bot] <support@github.com>
 2021-03-30 16:07:09 +00:00
Alex Kriuchykhin 3e0f4e7eb3
Merge pull request #3240 from okriuchykhin/ok_SCI_5604 
Fix for API float parsing in the inventory number type column [SCI-5604]
 2021-03-29 16:22:38 +02:00
Oleksii Kriuchykhin 2b2b6f7774 Fix for API float parsing in the inventory number type column [SCI-5604] 2021-03-29 15:59:24 +02:00
Miha Mencin 6ad3f7b92f
Merge pull request #3239 from okriuchykhin/ok_SCI_5595_v2 
Remove canvas-to-blob library [SCI-5595]
 2021-03-29 14:03:35 +02:00
Oleksii Kriuchykhin 2f6194a99f Remove canvas-to-blob library [SCI-5595] 2021-03-29 14:02:30 +02:00
Alex Kriuchykhin 511243b197
Merge pull request #3238 from okriuchykhin/ok_SCI_5595_v2 
Fix copyright info for vendor files [SCI-5595]
 2021-03-29 12:19:37 +02:00
Miha Mencin 787f2d58db
Merge pull request #3237 from biosistemika/SCI-5577-filter-notifications 
[SCI-5577] Filter notifications
 2021-03-29 11:55:22 +02:00
Oleksii Kriuchykhin e4d82ea81b Fix copyright info for vendor files [SCI-5595] 2021-03-29 11:49:19 +02:00
miha a82479cd49 unfreeze extents 2021-03-29 11:31:04 +02:00
miha e20191a865 fix code style 2 2021-03-29 11:13:32 +02:00
Miha Mencin 8625e99e99
Merge pull request #3236 from aignatov-bio/ai-sci-5597-fix-breadcrumbs-for-folders 
Fix folders breadcrumbs [SCI-5597]
 2021-03-29 11:11:34 +02:00
miha 3cc4326eb7 fix code style 2021-03-29 10:59:38 +02:00
miha 8f0713229a add basic tests 2021-03-29 10:52:02 +02:00
miha 11284d3b87 [SCI-5577] filter notifications 2021-03-29 09:52:57 +02:00
aignatov-bio 1c93131ff1 Fix folders breadcrumbs [SCI-5597] 2021-03-26 11:58:18 +01:00
Alex Kriuchykhin e9c1c27087
Merge pull request #3234 from okriuchykhin/ok_SCI_5594 
Update NewRelic config for production [SCI-5594]
 2021-03-25 19:04:53 +01:00
Miha Mencin 352f3004b3
Update mimemagic to 0.3.8 2021-03-25 18:47:21 +01:00
Alex Kriuchykhin 3790dbe0b3
Merge pull request #3235 from okriuchykhin/ok_SCI_5596 
Switch to graphviz gem [SCI-5596]
 2021-03-25 18:37:30 +01:00
Oleksii Kriuchykhin f7c865974d Switch to graphviz gem [SCI-5596] 2021-03-25 17:42:57 +01:00
Oleksii Kriuchykhin 22ca7e5ea6 Update NewRelic config for production [SCI-5594] 2021-03-25 16:02:28 +01:00
aignatov-bio 0ba6eec73c
Merge pull request #3232 from aignatov-bio/ai-sci-5564-fix-breadcrumbs-for-experiments-page 
Remove the project from experiments page breadcrumbs [SCI-5564]
 2021-03-25 15:41:49 +01:00
aignatov-bio b5cb46908c
Merge pull request #3225 from aignatov-bio/ai-sci-5563-add-reload-action-to-inline-asset 
Add reload action for assets [SCI-5563]
 2021-03-25 15:40:36 +01:00
Alex Kriuchykhin 44e67bdecc
Merge pull request #3233 from okriuchykhin/ok_SCI_5595 
Remove simple_token_authentication [SCI-5595]
 2021-03-25 15:38:07 +01:00
Oleksii Kriuchykhin 943c01cada Remove simple_token_authentication [SCI-5595] 2021-03-25 14:55:22 +01:00
aignatov-bio 9281a5631c Remove project from experiments page breadcrumbs [SCI-5564] 2021-03-25 14:32:05 +01:00