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4113 commits

Author SHA1 Message Date
Mojca Lorber 7757096693 Results activities refactoring 2019-03-19 15:33:57 +01:00
Mojca Lorber 1418abc8d7 Reports activities refactoring 2019-03-19 15:33:57 +01:00
Mojca Lorber d1e38e5bc9 Project activities refactoring 2019-03-19 15:33:57 +01:00
Mojca Lorber 70eebca5ee experiment activities refactoring 2019-03-19 15:33:57 +01:00
Urban Rotnik 1017836c0e Activities service fix 2019-03-19 14:12:39 +01:00
Urban Rotnik fe35c805b7 Add model breadcrumbs, update activities_helper 2019-03-19 14:01:06 +01:00
aignatov-bio 6eae12efab
Updating permission check for image editing [SCI - 3153, 3159] (#1568) 
*Add permission check for assets editing

* Add check for image format
 2019-03-19 13:52:57 +01:00
Anton Ignatov f606210652 Rubocop fix 2019-03-19 13:52:03 +01:00
Anton Ignatov 87280f083a [SCI-3166] Finalize global activities front end 2019-03-19 13:50:55 +01:00
aignatov-bio a0a3c4b97f
Fix file format bug (#1569) 2019-03-19 11:06:36 +01:00
Oleksii Kriuchykhin 0c71493fdb Add viewing permissions for global activities [SCI-2997] 2019-03-18 15:38:19 +01:00
Urban Rotnik 5dccdbab17 fixup! Fix failing tests 2019-03-15 11:12:10 +01:00
Urban Rotnik 2ea2700837 fixup! Fix failing tests 2019-03-15 10:30:51 +01:00
Urban Rotnik b6a8556601 Add activities for exporting Projects, Inventory items 2019-03-12 09:15:06 +01:00
Urban Rotnik e7b57aa4f7 Add creating activities for Team actions 2019-03-12 09:15:06 +01:00
Urban Rotnik 3f18166320 Add Task and TaskTags activities 2019-03-12 09:15:06 +01:00
Urban Rotnik 7a05e817ef Add new Protocol steps activities 2019-03-12 09:15:06 +01:00
Urban Rotnik b33e95e18a New Protocols actions logging 2019-03-12 09:14:53 +01:00
Urban Rotnik cfe2888bea Repository columns actions loggin 2019-03-12 09:11:00 +01:00
Urban Rotnik 32422c00eb RepositoryRows actions loggin 2019-03-12 09:11:00 +01:00
Urban Rotnik 2a7bbac733 Repository actions logging 2019-03-12 09:11:00 +01:00
Urban Rotnik 976831e7d3 Edit and Archive experiment activity logging 2019-03-12 09:11:00 +01:00
Oleksii Kriuchykhin af94f79f0d Submit image as FormData [SCI-2879] 2019-03-11 15:13:08 +01:00
Oleksii Kriuchykhin 7315db73f1 Add missing semicolon [SCI-2856] 2019-03-11 15:13:08 +01:00
Oleksii Kriuchykhin 9bbdc8fc89 Include tui image editor with webpack [SCI-2856] 2019-03-11 15:12:38 +01:00
Oleksii Kriuchykhin ded74044de Fix circle icon in image editor [SCI-2855] 2019-03-11 15:10:38 +01:00
Oleksii Kriuchykhin feb75f62e1 Add workaround for image caching in fabric js [SCI-2855] 2019-03-11 15:10:32 +01:00
Oleksii Kriuchykhin 80e525fd97 Improve image editor behaviour [SCI-2855] 2019-03-11 15:09:49 +01:00
Oleksii Kriuchykhin 89e968c410 Add tui.image-editor [SCI-2815] 2019-03-11 15:08:15 +01:00
Urban Rotnik 3992336db9 Add type and value_for attributes to user hash 2019-03-11 08:37:22 +01:00
Urban Rotnik b8e84b5685 Add logic for saving message items values and types 2019-03-11 08:37:22 +01:00
Urban Rotnik 9ed3313f0f Create project activity refactored 2019-03-11 08:36:15 +01:00
Urban Rotnik 117944117b Add service for activity creation 2019-03-11 08:36:15 +01:00
Oleksii Kriuchykhin e3bacd6b9a Fix global activities page after refactoring [SCI-2994][SCI-3024] 2019-03-08 13:09:27 +01:00
Jure Grabnar eceda4909f Move edit_file permission for wopi file in a special function 
Used for overwritting it in addons.

Closes SCI-2949
 2019-03-08 12:22:35 +01:00
Oleksii Kriuchykhin 0b87e8e1e4 Merge branch 'features/global-activities' into ok_SCI_3024_v3 2019-03-08 10:29:51 +01:00
Alex Kriuchykhin bb29a97962
Merge pull request #1557 from okriuchykhin/ok_SCI_3151 
Improve JS files inclusion in export all [SCI-3151]
 2019-03-07 17:46:45 +01:00
Oleksii Kriuchykhin af9daf3a5e Improve JS files inclusion in export all [SCI-3151] 2019-03-07 17:42:47 +01:00
Alex Kriuchykhin ec1aec3bf1
Merge pull request #1556 from okriuchykhin/ok_SCI_3048 
Fix local storage file download links [SCI-3048]
 2019-03-07 16:58:30 +01:00
Oleksii Kriuchykhin 0c99ea9c5c Fix local storage file download links [SCI-3048] 2019-03-07 16:46:05 +01:00
Oleksii Kriuchykhin 8cc95bf491 Embed tables JS files to main HTML of Export All [SCI-3151] 2019-03-07 14:23:10 +01:00
Alex Kriuchykhin d5110a4f87
Merge pull request #1554 from okriuchykhin/ok_SCI_3150 
Fix JS files inclusion in export all report [SCI-3150]
 2019-03-07 11:17:51 +01:00
Oleksii Kriuchykhin 2b239e2f35 Fix JS files inclusion in export all report [SCI-3150] 2019-03-07 11:14:38 +01:00
aignatov-bio ec2dbb897f
Adding side pane filter and top pane tags [SCI - 3008, 3009, 3010, 3011, 3012, 3018, 3019, 3020] (#1521) 
* Adding side pane filtering and top pane
 2019-03-06 10:34:04 +01:00
Miha Mencin 8fbda40c49
Merge pull request #1552 from biosistemika/mm-sci-3119-create-templates-at-login 
put the scheduling logic into session create action
 2019-03-05 10:56:48 +01:00
Miha Mencin 9807c80286 move the create action to the tope section of controller 2019-03-05 10:49:36 +01:00
Miha Mencin 67fe486874 put the scheduling logic into session create action 2019-03-05 10:43:39 +01:00
aignatov-bio 6dcaea973d
Merge pull request #1550 from aignatov-bio/ai-sci-3123-keep-title-bold 
Bold text for read messages SCI-3123
 2019-03-05 10:30:16 +01:00
Miha Mencin 6deaff6382 fixing hound errors 2019-03-04 18:36:32 +01:00
Miha Mencin fa7bba9de7 scheduling creation of demo project at the sign in time 
remove wrong schema, fix comment, add migration
 2019-03-04 18:26:15 +01:00
Anton Ignatov 33682bb561 Bold text for read messages 2019-03-04 13:48:25 +01:00
Oleksii Kriuchykhin c3705ccb25 Improve group collapse JS code [SCI-2994][SCI-3024] 2019-03-04 13:44:43 +01:00
Miha Mencin 2ba040980f reverting the team changes, the scope is not needed 2019-03-01 17:48:38 +01:00
Miha Mencin 844303ae7c SCI-3119 schedule the creaton of template 2019-03-01 17:47:04 +01:00
aignatov-bio d69f8c5636
Merge pull request #1547 from aignatov-bio/ai-sci-3114-recapthca-bug 
Remove script from modal SCI-3114
 2019-03-01 14:58:49 +01:00
Anton Ignatov f636b5adff Remove script from modal 2019-03-01 14:56:06 +01:00
aignatov-bio 9a007b5d75
Merge pull request #1542 from aignatov-bio/ai-sci-3108-missing-user-name-in-activity 
Fix missing user name in activty, when moving experiment [SCI-3108]
 2019-03-01 14:16:59 +01:00
Alex Kriuchykhin 985820a97c
Merge pull request #1527 from okriuchykhin/ok_SCI_3101 
Move templates project creation for new team to delayed job [SCI-3101]
 2019-03-01 13:55:49 +01:00
Alex Kriuchykhin 09ed7922da
Merge pull request #1543 from okriuchykhin/ok_SCI_3107 
Improve speed of index query in projects overview service [SCI-3107]
 2019-03-01 13:53:56 +01:00
Anton Ignatov 1ae4a60f79 Fix recaptha error 2019-03-01 12:58:31 +01:00
Oleksii Kriuchykhin 1fedb4c91e Improve speed of index query in projects overview service [SCI-3107] 2019-02-28 17:46:34 +01:00
Anton Ignatov 9e472c0ccf Fix missing user name in activty, when moving experiment 2019-02-28 16:06:23 +01:00
Miha Mencin 4f9daa9590 SCI-3112 Change the the comments in demo project generator 2019-02-28 11:39:44 +01:00
Miha Mencin 088a860683
Merge pull request #1539 from biosistemika/features/templates 
Features/templates
 2019-02-28 10:23:13 +01:00
Jure Grabnar 18c738263d
Merge pull request #1536 from jbargu/jg_sci_3100 
Missing item smart annotation in Demo project [SCI-3100, 3098]
 2019-02-28 09:52:28 +01:00
Miha Mencin d03ef2cd2a
Merge branch 'master' into features/templates 2019-02-28 09:41:20 +01:00
Jure Grabnar 93490a1f47 Add missing created_at and fix typo 
Closes SCI-3100, SCI-3098
 2019-02-28 07:29:25 +01:00
Miha Mencin a372ebf07d
Revert "Task info section improvements [SCI - 3058]" 2019-02-27 21:00:11 +01:00
Jure Grabnar 0fbbe8b5de Add result comments to demo project 
Closes [SCI-3100].
 2019-02-27 20:32:28 +01:00
Miha Mencin 576520659c
Merge pull request #1532 from biosistemika/mm-sci-3031-remove-duplicated-relations 
added uniquness validator and index on user_projects and user_teams r…
 2019-02-27 19:53:25 +01:00
Oleksii Kriuchykhin 0930277c4e Add views and helpers for global activities individual cards [SCI-2994][SCI-3024] 2019-02-27 16:02:53 +01:00
Jure Grabnar 3acf9b71f8
Merge pull request #1525 from jbargu/jg_sci_3096_and_other_demo_issues 
Demo project improvements [SCI-3096], [SCI-3097], [SCI-3098], [SCI-3099], [SCI-3102]
 2019-02-27 15:43:14 +01:00
aignatov-bio 7ced0b367b
Merge pull request #1531 from aignatov-bio/ai-sci-3095-notification-bug-on-signup 
First what's up notification user gets already at signup [SCI-3095]
 2019-02-27 15:42:20 +01:00
Jure Grabnar 0699204d3b Add changes for parallel exec discussed with Miha 2019-02-27 15:22:19 +01:00
Miha Mencin 51b3aea49a added uniquness validator and index on user_projects and user_teams relations 
finxing typo, fixied failing test

fixing mistakenly commited file

fixing schema to include bigint migration
 2019-02-27 15:09:47 +01:00
Urban Rotnik 3121bf1d39 Update tooltip for system notifications dropdown 2019-02-27 14:49:18 +01:00
Anton Ignatov a6666c688c Adding check for user tutorial 2019-02-27 13:55:46 +01:00
Oleksii Kriuchykhin 0266f6bd3c Change search on subject query constaruction logic [SCI-3014] 2019-02-27 13:21:05 +01:00
Anton Ignatov 978c4bcb69 Fixed, trying to save object instead name 2019-02-27 10:43:46 +01:00
Jure Grabnar 30bc536d07 Fix smart annotations in demo project 
Closes SCI-3097, SCI-3102.
 2019-02-26 14:36:48 +01:00
Oleksii Kriuchykhin 74a60d443d Merge branch 'features/global-activities' into ok_SCI_3014_v2 2019-02-26 13:46:25 +01:00
Oleksii Kriuchykhin a0d2f7c676 Move templates project creation for new team to delayed job [SCI-3101] 2019-02-26 13:32:00 +01:00
Oleksii Kriuchykhin 61147b480c Add main global activities bussiness logic [SCI-3014] 2019-02-26 11:01:15 +01:00
Jure Grabnar 2464a45f83 Fix ordering for another step in demo project 
Closes SCI-3098.
 2019-02-26 08:34:50 +01:00
Jure Grabnar c409c39e60 Fix demo project's checklist item ordering 
Closes SCI-3099.
 2019-02-26 08:26:02 +01:00
Jure Grabnar b6dd783114 Improve generation of a demo project 
Closes SCI-3096
 2019-02-26 08:06:07 +01:00
Urban Rotnik c8ab9f8ff8 Fix tests 2019-02-26 08:04:05 +01:00
Urban Rotnik 5a123d26ac Activity model update 2019-02-26 07:15:05 +01:00
Anton Ignatov a4cabb203b Task info section improvements 2019-02-25 16:55:09 +01:00
Urban Rotnik 3ad6cee766 Fix tests, remove nullable field 2019-02-25 16:50:38 +01:00
Miha Mencin 76c3db0b11 added layout, added css, added select2 lib, WIP 2019-02-25 16:50:38 +01:00
Urban Rotnik 5b5c6c7122 Changes to Activity model 2019-02-25 16:49:55 +01:00
aignatov-bio 0bf7cb4c59
Merge pull request #1519 from biosistemika/ai-adding-multiple-select-plugin 
Adding new Select2 library with customizations
 2019-02-25 16:46:07 +01:00
Jure Grabnar 4edab957a4
Merge pull request #1516 from jbargu/jg_sci_3069_due_date_red 
Due date is not red for today anymore [SCI-3069]
 2019-02-25 13:20:50 +01:00
Jure Grabnar d7e91676c3 Rename initial experiment back to the old one 2019-02-24 08:13:57 +01:00
Jure Grabnar b4199b28e4 Remove turbolinks:load from the project show page 
Also rename Demo project experiment back to PCR.

Closes SCI-3081.
 2019-02-22 19:46:42 +01:00
Anton Ignatov 6971d1a55d Adding new Select2 library with customization 2019-02-22 16:40:33 +01:00
aignatov-bio aa8a2b040a
Merge pull request #1518 from biosistemika/features/system-notifications 
Notification changes on settings page [SCI 3084] (#1517)
 2019-02-22 14:01:38 +01:00
aignatov-bio 606708987f
Notification changes on settings page [SCI 3084] (#1517) 
* Fix css and update text settings
 2019-02-22 13:20:51 +01:00
Jure Grabnar f98d6fbd4d Remove archived task in Demo project 
Closes SCI-3082.
 2019-02-22 11:58:32 +01:00
Jure Grabnar f9cb8c8803 Add utc conversion to due_date 2019-02-22 10:47:39 +01:00
Jure Grabnar 87dcf301fb Change due_date calculation to DateTime#end_of_day 2019-02-22 10:23:12 +01:00
Jure Grabnar fb533eb9d3
Merge pull request #1507 from jbargu/jg_sci_2930_navigation_changed 
Add action_name to sidebar cache as dependency [SCI-2930]
 2019-02-22 10:04:57 +01:00
Jure Grabnar 7f0ea48dff
Merge pull request #1515 from jbargu/jg_sci_3080_demo_project_rename 
Rename Demo project and create rake task to create it on existing users [SCI-3080]
 2019-02-22 10:01:39 +01:00
Jure Grabnar 96f2da1e8b Shift due day calculations for 1 day 
Closes SCI-3069.
 2019-02-22 08:01:15 +01:00
Jure Grabnar ffe0493013 Rename Demo project and create rake task to create it on existing users 
Closes SCI-3080.
 2019-02-21 23:31:55 +01:00
Miha Mencin bcd0b433b6
Merge pull request #1514 from biosistemika/features/system-notifications 
Features/system notifications
 2019-02-21 16:38:58 +01:00
aignatov-bio 5f78d83f9c
Changing status from unread to read system notification is not correct one [SCI-3077 and SCI-3075] (#1513) 
* fix dropdown apperance

* Remove search and fix duplicate bug

* Fix specs for new method
 2019-02-21 16:15:13 +01:00
Urban Rotnik b50320a4bc Add margin for system notification modal 2019-02-21 15:15:33 +01:00
Oleksii Kriuchykhin db18f88807 Update templates to final version [SCI-3053] 2019-02-21 15:06:34 +01:00
Jure Grabnar 0fa06ea9fc
Merge pull request #1505 from jbargu/jg_sci_2928_few_turbolinks_bugs 
Check for recaptcha enabled boolean value
 2019-02-20 18:29:40 +01:00
aignatov-bio 5fdba554d2
Merge pull request #1510 from biosistemika/features/system-notifications 
Features/system notifications
 2019-02-20 17:22:57 +01:00
Urban Rotnik 82ea31e275 Add validation limits for system notification fields 2019-02-20 16:05:15 +01:00
Jure Grabnar 61f9df0656 Add action_name to sidebar cache as dependency 
Closes SCI-2930.
 2019-02-20 14:13:51 +01:00
aignatov-bio 35268252c8
After reading What’s new notification and reloading the page, gift status is unseen again [SCI 3051] (#1504) 
* Change relative path to absolute to mark_as_read and make clickable whole system notification with hover effecr
 2019-02-20 13:15:16 +01:00
Jure Grabnar e392f9e61f Check for recaptcha enabled boolean value 
Closes SCI-2928.
 2019-02-20 10:14:37 +01:00
Jure Grabnar 27ed8e781e
Merge pull request #1501 from jbargu/jg_sci_2985_recaptcha_invite_not_working 
Recaptcha input field now addressed with jQuery
 2019-02-20 08:44:23 +01:00
Alex Kriuchykhin 0a54eb8ebe
Merge pull request #1503 from biosistemika/features/templates 
Merge features/templates to master
 2019-02-19 15:07:42 +01:00
Urban Rotnik 7b6c6c414d Merge branch 'master' into features/templates 2019-02-19 14:46:15 +01:00
Mojca Lorber ebfacdd62c change experiments title color 2019-02-19 14:24:23 +01:00
aignatov-bio fcdb4e7a92
Merge pull request #1500 from biosistemika/features/system-notifications 
Features/system notifications
 2019-02-19 13:51:18 +01:00
Jure Grabnar ebdf9adab0 Recaptcha input field now addressed with jQuery 
Fix SCI-2985
 2019-02-19 13:05:33 +01:00
Urban Rotnik d3d9868ba4 Set version for HTTParty dependency, add opts in mailer 2019-02-19 11:23:01 +01:00
Urban Rotnik f63eaaefe7 Add user_system_notification records when syncing notifications, update email sending 2019-02-19 11:22:58 +01:00
Urban Rotnik 29d77ca81d Add system_notification sending email feature 2019-02-19 11:20:25 +01:00
aignatov-bio 8e905b67b2
System notification navbar menu drop down [SCI 2955] (#1498) 
* Add dropdown menu and icon for system notifications
* Finish system notification dropdown menu and add tests
 2019-02-19 11:08:59 +01:00
aignatov-bio c598541e09
System notification modal window [SCI-2957 and SCI-2958] (#1484) 
* Added new system notification modal

* Adding loading system notification on sign in
 2019-02-15 13:07:29 +01:00
Oleksii Kriuchykhin c186498a5e Merge branch 'features/templates' into ok_SCI_3037 2019-02-15 10:47:38 +01:00
Alex Kriuchykhin 185e3b4832
Merge pull request #1495 from okriuchykhin/ok_SCI_3039 
Create templates project when syncing templates if team doesn't have it [SCI-3039]
 2019-02-14 17:40:01 +01:00
Mojca Lorber 343a46584f Rename scope 2019-02-14 14:54:04 +01:00
Mojca Lorber 0e14c126e5 Add scope instead of method for active my_module_group 2019-02-14 10:53:48 +01:00
Urban Rotnik 5b55860dea Add scheduler 2019-02-13 15:48:15 +01:00
Urban Rotnik 9f3187abdf Add service for sync system notifications 2019-02-13 15:48:15 +01:00
Oleksii Kriuchykhin da30d187a6 Create templates project when syncing templates if team doesn't have it [SCI-3039] 2019-02-13 15:17:33 +01:00
mlorb 71e4cc4dbd
Merge branch 'master' into ml-sci-2940 2019-02-13 14:35:03 +01:00
Mojca Lorber 0adb8b2b61 Fix failing tests 2019-02-13 14:31:26 +01:00
aignatov-bio 5c85595ab4
System Notifications - View All Page [SCI-2956 and SCI-3001] (#1482) 
* System notification view and notification partial (SCI 2956 and SCI 3001)
 2019-02-13 13:06:14 +01:00
Mojca Lorber 16f99afbc0 Minor fixes 2019-02-13 12:20:14 +01:00
Oleksii Kriuchykhin f3ad4f7fc9 Fix failing test [SCI-3037] 2019-02-12 13:39:38 +01:00
Mojca Lorber d706a18e2d Add flag for archived tasks to experiment exporter 2019-02-12 13:29:48 +01:00
mlorb 8bad68c854
Merge pull request #1457 from mlorb/ml-sci-2933 
Change experiment cards look and feel [SCI-2933]
 2019-02-12 11:49:24 +01:00
Mojca Lorber 3b4a894124 fix hound 2019-02-12 11:24:44 +01:00
Oleksii Kriuchykhin 7854b9d281 Merge branch 'features/templates' into ok_SCI_3037 2019-02-12 11:18:31 +01:00
Oleksii Kriuchykhin 445098fe45 Fix protocols in team export service [SCI-3037] 2019-02-12 10:56:15 +01:00
Alex Kriuchykhin b71c9d96a2
Merge pull request #1476 from okriuchykhin/ok_SCI_2944 
Add test for templates service [SCI-2944]
 2019-02-12 09:39:03 +01:00
Mojca Lorber d8cc482cbf remove electronic signatures from templates 2019-02-11 17:51:48 +01:00
Mojca Lorber 78a29c4141 add templates after protocol_keyword_team rake task was run 2019-02-11 16:15:56 +01:00
Mojca Lorber 087832c29d add templates 2019-02-11 14:02:49 +01:00
aignatov-bio de75ec4600
Merge pull request #1485 from biosistemika/ai-sci-3006-inventory-order-bug 
[SCI-3006] After changing order of inventory columns item can not be edited, deleted, copied
 2019-02-11 13:50:13 +01:00
aignatov-bio 16164477ac
Merge pull request #1487 from biosistemika/ai-sci-3005-user-counter-card-not-updated 
User counter on task card is not updated [SCI-3005]
 2019-02-11 13:49:49 +01:00